Secretory pathway protein Sec39
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24350 AT5G24350 AT5G24350 |
| fragaria_vesca | FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 |
| malus_domestica | MD01G1225300.v1.1 MD07G1295800.v1.1 |
| prunus_persica | Prupe.2G315300_v2.0.a1 Prupe.2G315300_v2.0.a1 |
| pyrus_communis | pycom01g23370 pycom07g26850 pycom07g26860 |
| rosa_chinensis | RchiOBHm_Chr1g0381961 |
| rosa_laevigata | RLG00000026198 |
| rosa_multiflora | Rmu_sc0010238.1_g000002 Rmu_sc0017430.1_g000002 Rmu_sc0017430.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00278310 |
| rosa_rugosa | Rorug01G0432500 |
| rosa_samantha | Rh1AG455700 Rh1BG412800 Rh1CG427700 Rh1DG445100 |
| rosa_wichuraiana | Rw1G041350 Rw1G041500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1409, 2834, 5396 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 880, 3216 |
| Acc36I | ACCTGC | 3 cut(s) | 1686, 2214, 6117 |
| Acc65I | GGTACC | 2 cut(s) | 2761, 3857 |
| AccB1I | GGYRCC | 2 cut(s) | 2761, 3857 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 3161, 4175 |
| AccBSI | CCGCTC | 2 cut(s) | 635, 2235 |
| AccI | GTMKAC | 4 cut(s) | 3724, 4391, 5028, 5139 |
| AccIII | TCCGGA | 1 cut(s) | 7132 |
| AciI | CCGC | 8 cut(s) | 309, 633, 1051, 1627, 2235, 2717, 2896, 5317 |
| AclI | AACGTT | 2 cut(s) | 3168, 7236 |
| AcoI | YGGCCR | 1 cut(s) | 2051 |
| AcuI | CTGAAG | 7 cut(s) | 1623, 2492, 4140, 5043, 5694, 5706, 6405 |
| AflII | CTTAAG | 2 cut(s) | 1640, 5014 |
| AflIII | ACRYGT | 3 cut(s) | 3316, 4888, 5290 |
| AgeI | ACCGGT | 1 cut(s) | 4850 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3669 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1513, 1545 |
| AleI | CACNNNNGTG | 3 cut(s) | 2163, 2593, 5720 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 7157, 7189 |
| Alw21I | GWGCWC | 4 cut(s) | 2590, 2612, 3362, 6060 |
| Alw44I | GTGCAC | 3 cut(s) | 2586, 2608, 6056 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2876, 3416, 3553 |
| Ama87I | CYCGRG | 2 cut(s) | 1679, 4503 |
| Aor13HI | TCCGGA | 1 cut(s) | 7132 |
| AoxI | GGCC | 4 cut(s) | 1057, 2051, 2722, 6428 |
| ApaLI | GTGCAC | 3 cut(s) | 2586, 2608, 6056 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 952, 956, 984, 988, 1713, 1745, 1867, 1899 |
| AseI | ATTAAT | 2 cut(s) | 2061, 3647 |
| AsiGI | ACCGGT | 1 cut(s) | 4850 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1863, 2780, 5194, 5220 |
| Asp718I | GGTACC | 2 cut(s) | 2761, 3857 |
| AspA2I | CCTAGG | 1 cut(s) | 2038 |
| AspLEI | GCGC | 2 cut(s) | 3517, 4797 |
| AspS9I | GGNCC | 8 cut(s) | 1023, 1517, 1902, 3509, 5465, 5663, 5702, 6428 |
| AsuC2I | CCSGG | 1 cut(s) | 5940 |
| AsuNHI | GCTAGC | 1 cut(s) | 814 |
| AvaI | CYCGRG | 2 cut(s) | 1679, 4503 |
| AvaII | GGWCC | 7 cut(s) | 1023, 1517, 1902, 3509, 5465, 5663, 5702 |
| AvrII | CCTAGG | 1 cut(s) | 2038 |
| BaeGI | GKGCMC | 4 cut(s) | 2590, 2612, 5567, 6060 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2116, 2149, 2753, 2786 |
| BalI | TGGCCA | 1 cut(s) | 2053 |
| BamHI | GGATCC | 2 cut(s) | 568, 4165 |
| BanI | GGYRCC | 2 cut(s) | 2761, 3857 |
| BanII | GRGCYC | 1 cut(s) | 3362 |
| BbsI | GAAGAC | 2 cut(s) | 4431, 5354 |
| Bbv12I | GWGCWC | 4 cut(s) | 2590, 2612, 3362, 6060 |
| BbvCI | CCTCAGC | 2 cut(s) | 5931, 7071 |
| BceAI | ACGGC | 2 cut(s) | 56, 1736 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 2807, 2841, 2846, 2880, 7015, 7049 |
| BciVI | GTATCC | 1 cut(s) | 6009 |
| BclI | TGATCA | 3 cut(s) | 1378, 4879, 6547 |
| BcnI | CCSGG | 1 cut(s) | 5940 |
| BfrI | CTTAAG | 2 cut(s) | 1640, 5014 |
| BfuAI | ACCTGC | 3 cut(s) | 1686, 2214, 6117 |
| BfuI | GTATCC | 1 cut(s) | 6009 |
| BglII | AGATCT | 3 cut(s) | 868, 1196, 3616 |
| BlnI | CCTAGG | 1 cut(s) | 2038 |
| BlpI | GCTNAGC | 1 cut(s) | 7052 |
| BmcAI | AGTACT | 2 cut(s) | 4357, 6957 |
| Bme18I | GGWCC | 7 cut(s) | 1023, 1517, 1902, 3509, 5465, 5663, 5702 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3669 |
| BmeT110I | CYCGRG | 2 cut(s) | 1679, 4503 |
| BmgT120I | GGNCC | 8 cut(s) | 1023, 1517, 1902, 3509, 5465, 5663, 5702, 6428 |
| BmrI | ACTGGG | 2 cut(s) | 3210, 6403 |
| BmtI | GCTAGC | 1 cut(s) | 818 |
| BmuI | ACTGGG | 2 cut(s) | 3210, 6403 |
| BpiI | GAAGAC | 2 cut(s) | 4431, 5354 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1891, 1923, 2183, 2215, 3216, 3248 |
| BpmI | CTGGAG | 7 cut(s) | 530, 770, 1306, 2717, 3348, 6242, 7115 |
| Bpu10I | CCTNAGC | 3 cut(s) | 3132, 5931, 7071 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 7052 |
| BpuEI | CTTGAG | 5 cut(s) | 2165, 2385, 5264, 5459, 6625 |
| BpuMI | CCSGG | 1 cut(s) | 5940 |
| Bsa29I | ATCGAT | 1 cut(s) | 4545 |
| BsaAI | YACGTR | 1 cut(s) | 889 |
| BsaBI | GATNNNNATC | 2 cut(s) | 196, 2421 |
| BsaI | GGTCTC | 2 cut(s) | 4820, 5123 |
| BsaJI | CCNNGG | 9 cut(s) | 1365, 1435, 1895, 1983, 2038, 3923, 5808, 6035, 6189 |
| BsaWI | WCCGGW | 2 cut(s) | 4850, 7132 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 743, 773, 2936, 2966, 4922, 4952, 5528, 5558 |
| Bse118I | RCCGGY | 1 cut(s) | 4850 |
| Bse3DI | GCAATG | 5 cut(s) | 1929, 2912, 5378, 7157, 7220 |
| Bse8I | GATNNNNATC | 2 cut(s) | 196, 2421 |
| BseAI | TCCGGA | 1 cut(s) | 7132 |
| BseCI | ATCGAT | 1 cut(s) | 4545 |
| BseDI | CCNNGG | 9 cut(s) | 1365, 1435, 1895, 1983, 2038, 3923, 5808, 6035, 6189 |
| BseJI | GATNNNNATC | 2 cut(s) | 196, 2421 |
| BseMI | GCAATG | 5 cut(s) | 1929, 2912, 5378, 7157, 7220 |
| BseRI | GAGGAG | 4 cut(s) | 66, 3685, 4725, 4744 |
| BseSI | GKGCMC | 4 cut(s) | 2590, 2612, 5567, 6060 |
| BseYI | CCCAGC | 2 cut(s) | 2984, 6011 |
| BsgI | GTGCAG | 5 cut(s) | 1544, 1727, 2192, 4641, 7121 |
| BshFI | GGCC | 4 cut(s) | 1059, 2053, 2724, 6430 |
| BshNI | GGYRCC | 2 cut(s) | 2761, 3857 |
| BshTI | ACCGGT | 1 cut(s) | 4850 |
| BshVI | ATCGAT | 1 cut(s) | 4545 |
| BsiHKAI | GWGCWC | 4 cut(s) | 2590, 2612, 3362, 6060 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1679, 4503 |
| BsiSI | CCGG | 3 cut(s) | 4851, 5940, 7133 |
| BslFI | GGGAC | 6 cut(s) | 310, 639, 1888, 3099, 6347, 6410 |
| BsmBI | CGTCTC | 1 cut(s) | 26 |
| BsmFI | GGGAC | 6 cut(s) | 310, 639, 1888, 3099, 6347, 6410 |
| BsmI | GAATGC | 1 cut(s) | 3143 |
| BsnI | GGCC | 4 cut(s) | 1059, 2053, 2724, 6430 |
| Bso31I | GGTCTC | 2 cut(s) | 4820, 5123 |
| BsoBI | CYCGRG | 2 cut(s) | 1679, 4503 |
| Bsp1286I | GDGCHC | 5 cut(s) | 2590, 2612, 3362, 5567, 6060 |
| Bsp13I | TCCGGA | 1 cut(s) | 7132 |
| Bsp1407I | TGTACA | 3 cut(s) | 493, 592, 1549 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 7052 |
| Bsp19I | CCATGG | 1 cut(s) | 6189 |
| BspACI | CCGC | 8 cut(s) | 309, 633, 1051, 1627, 2235, 2717, 2896, 5317 |
| BspANI | GGCC | 4 cut(s) | 1059, 2053, 2724, 6430 |
| BspDI | ATCGAT | 1 cut(s) | 4545 |
| BspEI | TCCGGA | 1 cut(s) | 7132 |
| BspHI | TCATGA | 3 cut(s) | 352, 1990, 4239 |
| BspMAI | CTGCAG | 3 cut(s) | 2434, 3412, 4774 |
| BspMI | ACCTGC | 3 cut(s) | 1686, 2214, 6117 |
| BspOI | GCTAGC | 1 cut(s) | 818 |
| BspQI | GCTCTTC | 1 cut(s) | 4188 |
| BspT107I | GGYRCC | 2 cut(s) | 2761, 3857 |
| BspTI | CTTAAG | 2 cut(s) | 1640, 5014 |
| BspTNI | GGTCTC | 2 cut(s) | 4820, 5123 |
| BsrBI | CCGCTC | 2 cut(s) | 635, 2235 |
| BsrDI | GCAATG | 5 cut(s) | 1929, 2912, 5378, 7157, 7220 |
| BsrFI | RCCGGY | 1 cut(s) | 4850 |
| BsrGI | TGTACA | 3 cut(s) | 493, 592, 1549 |
| BssAI | RCCGGY | 1 cut(s) | 4850 |
| BssECI | CCNNGG | 9 cut(s) | 1365, 1435, 1895, 1983, 2038, 3923, 5808, 6035, 6189 |
| BssNAI | GTATAC | 1 cut(s) | 3725 |
| BssT1I | CCWWGG | 5 cut(s) | 1365, 1435, 2038, 3923, 6189 |
| Bst1107I | GTATAC | 1 cut(s) | 3725 |
| Bst6I | CTCTTC | 4 cut(s) | 2081, 2316, 4188, 6965 |
| BstAFI | CTTAAG | 2 cut(s) | 1640, 5014 |
| BstAUI | TGTACA | 3 cut(s) | 493, 592, 1549 |
| BstBAI | YACGTR | 1 cut(s) | 889 |
| BstC8I | GCNNGC | 5 cut(s) | 681, 816, 2510, 4138, 6294 |
| BstDSI | CCRYGG | 2 cut(s) | 6035, 6189 |
| BstEII | GGTNACC | 2 cut(s) | 1996, 4024 |
| BstHHI | GCGC | 2 cut(s) | 3517, 4797 |
| BstNSI | RCATGY | 9 cut(s) | 230, 936, 3320, 4892, 5035, 5039, 5294, 6479, 7214 |
| BstPI | GGTNACC | 2 cut(s) | 1996, 4024 |
| BstSLI | GKGCMC | 4 cut(s) | 2590, 2612, 5567, 6060 |
| BstV2I | GAAGAC | 2 cut(s) | 4431, 5354 |
| BstX2I | RGATCY | 9 cut(s) | 568, 868, 1196, 1310, 2042, 3262, 3616, 4165, 6932 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 856 |
| BstYI | RGATCY | 9 cut(s) | 568, 868, 1196, 1310, 2042, 3262, 3616, 4165, 6932 |
| BstZ17I | GTATAC | 1 cut(s) | 3725 |
| Bsu15I | ATCGAT | 1 cut(s) | 4545 |
| BsuI | GTATCC | 1 cut(s) | 6009 |
| BsuRI | GGCC | 4 cut(s) | 1059, 2053, 2724, 6430 |
| BsuTUI | ATCGAT | 1 cut(s) | 4545 |
| BtgI | CCRYGG | 2 cut(s) | 6035, 6189 |
| BtgZI | GCGATG | 2 cut(s) | 5651, 7032 |
| BtsI | GCAGTG | 4 cut(s) | 2039, 3166, 6470, 6692 |
| BveI | ACCTGC | 3 cut(s) | 1686, 2214, 6117 |
| Cac8I | GCNNGC | 5 cut(s) | 681, 816, 2510, 4138, 6294 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2876, 3416, 3553 |
| CciI | TCATGA | 3 cut(s) | 352, 1990, 4239 |
| CfoI | GCGC | 2 cut(s) | 3517, 4797 |
| Cfr10I | RCCGGY | 1 cut(s) | 4850 |
| Cfr13I | GGNCC | 8 cut(s) | 1023, 1517, 1902, 3509, 5465, 5663, 5702, 6428 |
| ClaI | ATCGAT | 1 cut(s) | 4545 |
| CseI | GACGC | 1 cut(s) | 1793 |
| CsiI | ACCWGGT | 1 cut(s) | 338 |
| CspAI | ACCGGT | 1 cut(s) | 4850 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 6663, 6698 |
| DraI | TTTAAA | 7 cut(s) | 1788, 2296, 3015, 4333, 4578, 4975, 6526 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 880, 3216 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3669 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 880, 3216 |
| EaeI | YGGCCR | 1 cut(s) | 2051 |
| Eam1104I | CTCTTC | 4 cut(s) | 2081, 2316, 4188, 6965 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3669 |
| EarI | CTCTTC | 4 cut(s) | 2081, 2316, 4188, 6965 |
| EciI | GGCGGA | 1 cut(s) | 2732 |
| Ecl136II | GAGCTC | 1 cut(s) | 3360 |
| Eco130I | CCWWGG | 5 cut(s) | 1365, 1435, 2038, 3923, 6189 |
| Eco24I | GRGCYC | 1 cut(s) | 3362 |
| Eco31I | GGTCTC | 2 cut(s) | 4820, 5123 |
| Eco32I | GATATC | 2 cut(s) | 4640, 4684 |
| Eco47I | GGWCC | 7 cut(s) | 1023, 1517, 1902, 3509, 5465, 5663, 5702 |
| Eco53kI | GAGCTC | 1 cut(s) | 3360 |
| Eco57I | CTGAAG | 7 cut(s) | 1623, 2492, 4140, 5043, 5694, 5706, 6405 |
| Eco88I | CYCGRG | 2 cut(s) | 1679, 4503 |
| Eco91I | GGTNACC | 2 cut(s) | 1996, 4024 |
| EcoICRI | GAGCTC | 1 cut(s) | 3360 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1902, 3509, 6428 |
| EcoO65I | GGTNACC | 2 cut(s) | 1996, 4024 |
| EcoRI | GAATTC | 1 cut(s) | 3814 |
| EcoRV | GATATC | 2 cut(s) | 4640, 4684 |
| EcoT14I | CCWWGG | 5 cut(s) | 1365, 1435, 2038, 3923, 6189 |
| EcoT22I | ATGCAT | 6 cut(s) | 2912, 3610, 5037, 7048, 7159, 7216 |
| EcoT38I | GRGCYC | 1 cut(s) | 3362 |
| ErhI | CCWWGG | 5 cut(s) | 1365, 1435, 2038, 3923, 6189 |
| Esp3I | CGTCTC | 1 cut(s) | 26 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 3094, 3126, 4185, 4217, 4379, 4411, 5376, 5408 |
| FaqI | GGGAC | 6 cut(s) | 310, 639, 1888, 3099, 6347, 6410 |
| FauI | CCCGC | 1 cut(s) | 2889 |
| FauNDI | CATATG | 1 cut(s) | 1879 |
| FbaI | TGATCA | 3 cut(s) | 1378, 4879, 6547 |
| FblI | GTMKAC | 4 cut(s) | 3724, 4391, 5028, 5139 |
| FriOI | GRGCYC | 1 cut(s) | 3362 |
| GlaI | GCGC | 2 cut(s) | 3516, 4796 |
| GsaI | CCCAGC | 2 cut(s) | 2988, 6015 |
| GsuI | CTGGAG | 7 cut(s) | 530, 770, 1306, 2717, 3348, 6242, 7115 |
| HaeIII | GGCC | 4 cut(s) | 1059, 2053, 2724, 6430 |
| HapII | CCGG | 3 cut(s) | 4851, 5940, 7133 |
| HgaI | GACGC | 1 cut(s) | 1793 |
| HhaI | GCGC | 2 cut(s) | 3517, 4797 |
| Hin6I | GCGC | 2 cut(s) | 3515, 4795 |
| HinP1I | GCGC | 2 cut(s) | 3515, 4795 |
| HincII | GTYRAC | 8 cut(s) | 143, 655, 1009, 1886, 2104, 2412, 4483, 5240 |
| HindII | GTYRAC | 8 cut(s) | 143, 655, 1009, 1886, 2104, 2412, 4483, 5240 |
| HindIII | AAGCTT | 3 cut(s) | 466, 910, 5058 |
| HpaII | CCGG | 3 cut(s) | 4851, 5940, 7133 |
| Hpy99I | CGWCG | 2 cut(s) | 2856, 7022 |
| HpyCH4IV | ACGT | 6 cut(s) | 888, 2851, 3168, 4437, 5717, 7236 |
| HpySE526I | ACGT | 6 cut(s) | 888, 2851, 3168, 4437, 5717, 7236 |
| HspAI | GCGC | 2 cut(s) | 3515, 4795 |
| Kpn2I | TCCGGA | 1 cut(s) | 7132 |
| KpnI | GGTACC | 2 cut(s) | 2765, 3861 |
| Ksp22I | TGATCA | 3 cut(s) | 1378, 4879, 6547 |
| LguI | GCTCTTC | 1 cut(s) | 4188 |
| MabI | ACCWGGT | 1 cut(s) | 338 |
| MaeII | ACGT | 6 cut(s) | 888, 2851, 3168, 4437, 5717, 7236 |
| MbiI | CCGCTC | 2 cut(s) | 635, 2235 |
| MfeI | CAATTG | 3 cut(s) | 2128, 3428, 4281 |
| MflI | RGATCY | 9 cut(s) | 568, 868, 1196, 1310, 2042, 3262, 3616, 4165, 6932 |
| MhlI | GDGCHC | 5 cut(s) | 2590, 2612, 3362, 5567, 6060 |
| MlsI | TGGCCA | 1 cut(s) | 2053 |
| MluNI | TGGCCA | 1 cut(s) | 2053 |
| MmeI | TCCRAC | 6 cut(s) | 1050, 1455, 1495, 1647, 5729, 7231 |
| Mox20I | TGGCCA | 1 cut(s) | 2053 |
| Mph1103I | ATGCAT | 6 cut(s) | 2912, 3610, 5037, 7048, 7159, 7216 |
| MroI | TCCGGA | 1 cut(s) | 7132 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1863, 2780, 5194, 5220 |
| MscI | TGGCCA | 1 cut(s) | 2053 |
| Msp20I | TGGCCA | 1 cut(s) | 2053 |
| MspA1I | CMGCKG | 2 cut(s) | 4140, 6230 |
| MspCI | CTTAAG | 2 cut(s) | 1640, 5014 |
| MspI | CCGG | 3 cut(s) | 4851, 5940, 7133 |
| MunI | CAATTG | 3 cut(s) | 2128, 3428, 4281 |
| Mva1269I | GAATGC | 1 cut(s) | 3143 |
| NciI | CCSGG | 1 cut(s) | 5940 |
| NcoI | CCATGG | 1 cut(s) | 6189 |
| NdeI | CATATG | 1 cut(s) | 1879 |
| NheI | GCTAGC | 1 cut(s) | 814 |
| NmeAIII | GCCGAG | 1 cut(s) | 5354 |
| NmuCI | GTSAC | 7 cut(s) | 688, 951, 958, 1063, 1658, 1996, 3226 |
| NsiI | ATGCAT | 6 cut(s) | 2912, 3610, 5037, 7048, 7159, 7216 |
| NspI | RCATGY | 9 cut(s) | 230, 936, 3320, 4892, 5035, 5039, 5294, 6479, 7214 |
| OliI | CACNNNNGTG | 3 cut(s) | 2163, 2593, 5720 |
| PacI | TTAATTAA | 1 cut(s) | 6561 |
| PaeR7I | CTCGAG | 1 cut(s) | 4503 |
| PagI | TCATGA | 3 cut(s) | 352, 1990, 4239 |
| PciI | ACATGT | 3 cut(s) | 3316, 4888, 5290 |
| PciSI | GCTCTTC | 1 cut(s) | 4188 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 648 |
| PctI | GAATGC | 1 cut(s) | 3143 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1863, 2780, 5194, 5220 |
| PflFI | GACNNNGTC | 2 cut(s) | 3471, 5540 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 3161, 4175 |
| PfoI | TCCNGGA | 3 cut(s) | 3985, 5739, 6417 |
| PinAI | ACCGGT | 1 cut(s) | 4850 |
| Ppu21I | YACGTR | 1 cut(s) | 889 |
| PpuMI | RGGWCCY | 2 cut(s) | 1902, 3509 |
| PscI | ACATGT | 3 cut(s) | 3316, 4888, 5290 |
| PshBI | ATTAAT | 2 cut(s) | 2061, 3647 |
| PsiI | TTATAA | 3 cut(s) | 1409, 2834, 5396 |
| Psp124BI | GAGCTC | 1 cut(s) | 3362 |
| Psp1406I | AACGTT | 2 cut(s) | 3168, 7236 |
| Psp5II | RGGWCCY | 2 cut(s) | 1902, 3509 |
| PspEI | GGTNACC | 2 cut(s) | 1996, 4024 |
| PspFI | CCCAGC | 2 cut(s) | 2984, 6011 |
| PspPI | GGNCC | 8 cut(s) | 1023, 1517, 1902, 3509, 5465, 5663, 5702, 6428 |
| PspPPI | RGGWCCY | 2 cut(s) | 1902, 3509 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 5766, 5798 |
| PstI | CTGCAG | 3 cut(s) | 2434, 3412, 4774 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2876, 3416, 3553 |
| PsuI | RGATCY | 9 cut(s) | 568, 868, 1196, 1310, 2042, 3262, 3616, 4165, 6932 |
| PsyI | GACNNNGTC | 2 cut(s) | 3471, 5540 |
| PvuII | CAGCTG | 2 cut(s) | 4140, 6230 |
| SacI | GAGCTC | 1 cut(s) | 3362 |
| SapI | GCTCTTC | 1 cut(s) | 4188 |
| Sau96I | GGNCC | 8 cut(s) | 1023, 1517, 1902, 3509, 5465, 5663, 5702, 6428 |
| ScaI | AGTACT | 2 cut(s) | 4357, 6957 |
| SduI | GDGCHC | 5 cut(s) | 2590, 2612, 3362, 5567, 6060 |
| SexAI | ACCWGGT | 1 cut(s) | 338 |
| Sfr274I | CTCGAG | 1 cut(s) | 4503 |
| SinI | GGWCC | 7 cut(s) | 1023, 1517, 1902, 3509, 5465, 5663, 5702 |
| SlaI | CTCGAG | 1 cut(s) | 4503 |
| SmlI | CTYRAG | 8 cut(s) | 1640, 2144, 2400, 4503, 5014, 5243, 5474, 6604 |
| SmoI | CTYRAG | 8 cut(s) | 1640, 2144, 2400, 4503, 5014, 5243, 5474, 6604 |
| SsiI | CCGC | 8 cut(s) | 309, 633, 1051, 1627, 2235, 2717, 2896, 5317 |
| SspI | AATATT | 4 cut(s) | 1333, 4981, 5261, 7066 |
| SstI | GAGCTC | 1 cut(s) | 3362 |
| StyI | CCWWGG | 5 cut(s) | 1365, 1435, 2038, 3923, 6189 |
| TaiI | ACGT | 6 cut(s) | 891, 2854, 3171, 4440, 5720, 7239 |
| TatI | WGTACW | 9 cut(s) | 493, 592, 1454, 1489, 1549, 2630, 4355, 6137, 6955 |
| TauI | GCSGC | 1 cut(s) | 312 |
| TseFI | GTSAC | 7 cut(s) | 688, 951, 958, 1063, 1658, 1996, 3226 |
| Tsp45I | GTSAC | 7 cut(s) | 688, 951, 958, 1063, 1658, 1996, 3226 |
| TspGWI | ACGGA | 2 cut(s) | 1303, 5094 |
| Tth111I | GACNNNGTC | 2 cut(s) | 3471, 5540 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 3161, 4175 |
| Vha464I | CTTAAG | 2 cut(s) | 1640, 5014 |
| VneI | GTGCAC | 3 cut(s) | 2586, 2608, 6056 |
| VpaK11BI | GGWCC | 7 cut(s) | 1023, 1517, 1902, 3509, 5465, 5663, 5702 |
| VspI | ATTAAT | 2 cut(s) | 2061, 3647 |
| XbaI | TCTAGA | 2 cut(s) | 3619, 5485 |
| XceI | RCATGY | 9 cut(s) | 230, 936, 3320, 4892, 5035, 5039, 5294, 6479, 7214 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 2732, 5459, 6097 |
| XhoI | CTCGAG | 1 cut(s) | 4503 |
| XmaJI | CCTAGG | 1 cut(s) | 2038 |
| XmiI | GTMKAC | 4 cut(s) | 3724, 4391, 5028, 5139 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1863, 2780, 5194, 5220 |
| ZrmI | AGTACT | 2 cut(s) | 4357, 6957 |
| Zsp2I | ATGCAT | 6 cut(s) | 2912, 3610, 5037, 7048, 7159, 7216 |