Rmu_sc0017430.1_g000003

Secretory pathway protein Sec39

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017430.1
OG0004767
Physical Location & Seq
Forward (+)
28337 .. 32109
3773 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017430.1_g000003.1.cds

Sequence Viewer

Length: 3387 bp
atgaatgactgggattttattcaggtaccaaagtcggtgaactttttcttagagtctcatgcagatggaaaaggtgtaaagcaaattcttcgccttataatttcaaagtttatacgtcggcagcctagtcgttcagatactgattgggcagccatgtggcgggatatgcaatgcattagggaaaaagcatttccttttctggacttggagtatatgttaatggaattttgcagaggactgctgaaagctgggaagttttctcttgccaggaattatttaaagggtacaagttctgttgctttggcatcagacaaggctgagaaccttgtcattcaagctgcaagggagtattttttctcagcttcaagcctttcttgtcccgaaatctggaaggctaaggaatgcctcaatatatttccaagcagtggaaacgttaaagtagagtctgatattattgatgcacttacatttagacttcccagtctaggagtgactctcttacccatgcaattcaggcaaataaaagatccaatggagattatcaaaatggcaatcacaagtcaaactggtgcatatatacatgttgatgaactcattgaaattgccaaactacttggattgagctctccagacaacatatcttctgttcaggaagctattgccagagaagctgcagttgctggtgatctgcaattggcacttgatctctgtcttgttttggctaagaaaggacatggtcatatttgggatttatctgctgcaatagcaaggggtcctgcgcttgaaaacatggatataaattctcgaaagcagcttctgggttttgctttaagtaattgtgatgaggaatcagttagtgagttgctctatgcatggaaagatctagatttgcaaggtcagtgtgaaacattaatgatgttgagtgagacaaaatgtccagatttctcaattcaaggctcctcgatcatttcagattcagcccacagtatacaagatataatcaagctaaaaggttgcttggaaatggttgagggagctagttgtgatgaccaagaagttcatattagtaacattaagaattcactttctgctgttactgaaaacccacctattgataatggtaccaatttggaatcacttttgagagaaaatgggaaagttttgtcttttgctgccatacagcttccttggttgctcgaactaagtaggaaaacagaacactgtaagaagcgaaatactaatgtgattcctggaaagcagtatgtcagtgtaagaacacaggctttggtaaccattctctcctggttggcaagacatggtttagctcctacagacaatgtggttgcctctcttgcaaaatctattattgaaccacctgttactgaagatgaatatatagccagctgctcctttctcttgaatctggtggatccattgaatggggttgaagtgatagaagagcagcttagaacaaggaaggattaccaagaaatatctagcatcatgaatatggggatgacatatagcttattatatagttctgcaattgagtgtgaaagtcctatgcaaaggagggagctgctattgaggaagtttaaagagaagcacacacaatctagtactgatgaatttgacaaatttgacaaggtaaagtctaccttttggagagaatggaagctgaaattagaagaccaaaagcacgttgcagatcactgtagagcattagagaaaataattcctggtgttgacacaacacgctttttgtctcgagactttaattacattgggagtgttcttcttcccctgatcgattctgtaaagttagagaaaaagcacattttaaaggacattctgaaattagctgatggctatggcttgaatcgtgcagaggtctttttacgatatctaagttctgtccttgtctctgaggtatggacaaatgatgatatcacagccgaaatttctgaatttagaggagaaatagatgaccaagctgttgaaaccatcaaagcgatctcctctgctgtgtaccctgcagtcgatggatgcaacaagttgcgccttgcttacctgtttggtctcctttctgactgctacttgcgactggaagaaaccggtaaagaattaccaataatacatcctgatcaagcacatgtctctggttttggattatctcgtttttacaggttggtggagcaagagtgcataagagttgcctttattgtgaacctgaactttaaaaatattgctggattaggtggtttgaactttaagtgcttaagctctgaagtctacatgcatgtctatgatagtagcttggaagctttgtcaaagatgatacagacttttaccagcatatattctgatccgttgccagagggtctcataacatggcaggatgtctacaaacattatatatggagtttgctgacagctttagagactaaagctggaacagcttccatcatcaaaagcactgaaacccttcaaggttttgtatgtcaacttgagcagagctatgaatattgcagaaggtatatcagactcttggcacatgtagattctttgaacatgatgaagcggtatttcacaataatcctacctctttttggttcttatgggggtctaccagataactcggcattgcaagaatgtcttataattctcttgaacttttggataagattgattgatgagatgaaggagattgcatcacatgaggatgctggaccaaacctcaagctcaatctagattgcttattgcattgtctaaaagtttgtatgaggttggtaatggaggacagtgtctcccctagtcaggggtggggcacacttgtcagctttatcaatcatggtttaattggtgaatctgcttctgaactttatttattctgtagagcgatgattttttctggttgtggatttggacctgtggctgaagtattttctgaagcagtaattcggggtccaactggtttcacgttggtgggagacagagaaatccaggaactcccccatctctacttgaatatcttggaacatattttacaggatgtggtcattagtgaatcccaggaataccagaatttataccagcttttgtcctctttgagtaaattagaaggagatttggaggatttggataaggtcaggaatataatttgggaaagaatggctgagttctctgataacccgcagcttcccggttccattcgagtgtttgctttagagctgatgcaatacctgacagggaaaaatataaagggtttctctgctgggatacaatctagtgttataccgtgggaaggatgggatgagaactccccacaaaccaccaccgcaactctattccttcaagctcacctcgccgaagatgctcaatcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006508 GO:0006624 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016485 GO:0019538 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0051604 GO:0071704 GO:1901564
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sec39

Protein Analysis

1128

Amino Acids

126.91

Weight (kDa)

5.17

Isoelectric Point (pI)

42.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 98, 2660
AasI GACNNNNNNGTC 1 cut(s) 480
Acc65I GGTACC 2 cut(s) 25, 1121
AccB1I GGYRCC 2 cut(s) 25, 1121
AccB7I CCANNNNNTGG 2 cut(s) 425, 1439
AccI GTMKAC 5 cut(s) 988, 1655, 2292, 2403, 2626
AciI CCGC 4 cut(s) 160, 2581, 3194, 3339
AclI AACGTT 1 cut(s) 432
AclWI GGATC 4 cut(s) 521, 1424, 1437, 2360
AcsI RAATTY 9 cut(s) 84, 224, 799, 1078, 1628, 1637, 1959, 1967, 3085
AcuI CTGAAG 4 cut(s) 1404, 2307, 2958, 2970
AfaI GTAC 5 cut(s) 27, 286, 1123, 1621, 2030
AfiI CCNNNNNNNGG 9 cut(s) 159, 387, 425, 485, 1439, 2609, 2818, 2819, 3305
AflII CTTAAG 1 cut(s) 2278
AflIII ACRYGT 3 cut(s) 580, 2152, 2554
AgeI ACCGGT 1 cut(s) 2114
AhdI GACNNNNNGTC 1 cut(s) 933
AjnI CCWGG 6 cut(s) 266, 1249, 1301, 1738, 3003, 3072
AleI CACNNNNGTG 1 cut(s) 2984
Alw21I GWGCWC 1 cut(s) 626
AlwI GGATC 4 cut(s) 521, 1424, 1437, 2360
AlwNI CAGNNNCTG 3 cut(s) 140, 680, 817
Ama87I CYCGRG 1 cut(s) 1767
ApoI RAATTY 9 cut(s) 84, 224, 799, 1078, 1628, 1637, 1959, 1967, 3085
AseI ATTAAT 1 cut(s) 911
AsiGI ACCGGT 1 cut(s) 2114
Asp700I GAANNNNTTC 3 cut(s) 44, 2458, 2484
Asp718I GGTACC 2 cut(s) 25, 1121
AspLEI GCGC 2 cut(s) 781, 2061
AspS9I GGNCC 4 cut(s) 773, 2729, 2927, 2966
AsuC2I CCSGG 1 cut(s) 3204
AsuHPI GGTGA 4 cut(s) 49, 695, 2876, 3353
AvaI CYCGRG 1 cut(s) 1767
AvaII GGWCC 4 cut(s) 773, 2729, 2927, 2966
BaeGI GKGCMC 1 cut(s) 2831
BaeI ACNNNNGTAYC 2 cut(s) 17, 50
BamHI GGATCC 1 cut(s) 1429
BanI GGYRCC 2 cut(s) 25, 1121
BanII GRGCYC 1 cut(s) 626
BbsI GAAGAC 1 cut(s) 1695
Bbv12I GWGCWC 1 cut(s) 626
BccI CCATC 7 cut(s) 59, 1859, 2012, 2036, 2471, 3024, 3303
BcgI CGANNNNNNTGC 4 cut(s) 71, 105, 110, 144
BciT130I CCWGG 6 cut(s) 268, 1251, 1303, 1740, 3005, 3074
BciVI GTATCC 1 cut(s) 3273
BclI TGATCA 1 cut(s) 2143
BcnI CCSGG 1 cut(s) 3204
BfmI CTRYAG 5 cut(s) 672, 1329, 1714, 2034, 2893
BfrI CTTAAG 1 cut(s) 2278
BfuI GTATCC 1 cut(s) 3273
BglII AGATCT 1 cut(s) 880
BmcAI AGTACT 1 cut(s) 1621
Bme1390I CCNGG 7 cut(s) 268, 1251, 1303, 1740, 3005, 3074, 3204
Bme18I GGWCC 4 cut(s) 773, 2729, 2927, 2966
BmeRI GACNNNNNGTC 1 cut(s) 933
BmeT110I CYCGRG 1 cut(s) 1767
BmgT120I GGNCC 4 cut(s) 773, 2729, 2927, 2966
BmiI GGNNCC 7 cut(s) 27, 774, 958, 1123, 1431, 2967, 3208
BmrFI CCNGG 7 cut(s) 268, 1251, 1303, 1740, 3005, 3074, 3204
BmrI ACTGGG 2 cut(s) 19, 474
BmsI GCATC 8 cut(s) 314, 448, 1509, 2036, 2713, 2720, 3225, 3364
BmuI ACTGGG 2 cut(s) 19, 474
BpiI GAAGAC 1 cut(s) 1695
BplI GAGNNNNNCTC 2 cut(s) 480, 512
BpmI CTGGAG 1 cut(s) 612
Bpu10I CCTNAGC 1 cut(s) 396
BpuEI CTTGAG 2 cut(s) 2528, 2723
BpuMI CCSGG 1 cut(s) 3204
Bsa29I ATCGAT 1 cut(s) 1809
BsaI GGTCTC 2 cut(s) 2084, 2387
BsaJI CCNNGG 3 cut(s) 1187, 3072, 3299
BsaWI WCCGGW 1 cut(s) 2114
BsaXI ACNNNNNCTCC 6 cut(s) 200, 230, 2186, 2216, 2792, 2822
Bsc4I CCNNNNNNNGG 9 cut(s) 159, 387, 425, 485, 1439, 2609, 2818, 2819, 3305
Bse118I RCCGGY 1 cut(s) 2114
Bse1I ACTGG 5 cut(s) 14, 480, 571, 2109, 2977
Bse3DI GCAATG 2 cut(s) 176, 2642
BseBI CCWGG 6 cut(s) 268, 1251, 1303, 1740, 3005, 3074
BseCI ATCGAT 1 cut(s) 1809
BseDI CCNNGG 3 cut(s) 1187, 3072, 3299
BseGI GGATG 8 cut(s) 1521, 2051, 2137, 2404, 2728, 3058, 3314, 3319
BseLI CCNNNNNNNGG 9 cut(s) 159, 387, 425, 485, 1439, 2609, 2818, 2819, 3305
BseMI GCAATG 2 cut(s) 176, 2642
BseMII CTCAG 4 cut(s) 309, 372, 1917, 3168
BseNI ACTGG 5 cut(s) 14, 480, 571, 2109, 2977
BseRI GAGGAG 3 cut(s) 949, 1989, 2008
BseSI GKGCMC 1 cut(s) 2831
BseYI CCCAGC 2 cut(s) 248, 3275
BsgI GTGCAG 1 cut(s) 1905
BshNI GGYRCC 2 cut(s) 25, 1121
BshTI ACCGGT 1 cut(s) 2114
BshVI ATCGAT 1 cut(s) 1809
BsiHKAI GWGCWC 1 cut(s) 626
BsiHKCI CYCGRG 1 cut(s) 1767
BsiSI CCGG 2 cut(s) 2115, 3204
BslFI GGGAC 1 cut(s) 363
BslI CCNNNNNNNGG 9 cut(s) 159, 387, 425, 485, 1439, 2609, 2818, 2819, 3305
BsmFI GGGAC 1 cut(s) 363
BsmI GAATGC 1 cut(s) 407
Bso31I GGTCTC 2 cut(s) 2084, 2387
BsoBI CYCGRG 1 cut(s) 1767
Bsp1286I GDGCHC 2 cut(s) 626, 2831
BspACI CCGC 4 cut(s) 160, 2581, 3194, 3339
BspCNI CTCAG 4 cut(s) 310, 371, 1918, 3169
BspDI ATCGAT 1 cut(s) 1809
BspHI TCATGA 1 cut(s) 1503
BspLI GGNNCC 7 cut(s) 27, 774, 958, 1123, 1431, 2967, 3208
BspMAI CTGCAG 2 cut(s) 676, 2038
BspPI GGATC 4 cut(s) 521, 1424, 1437, 2360
BspQI GCTCTTC 1 cut(s) 1452
BspT107I GGYRCC 2 cut(s) 25, 1121
BspTI CTTAAG 1 cut(s) 2278
BspTNI GGTCTC 2 cut(s) 2084, 2387
BsrDI GCAATG 2 cut(s) 176, 2642
BsrFI RCCGGY 1 cut(s) 2114
BsrI ACTGG 5 cut(s) 14, 480, 571, 2109, 2977
BssAI RCCGGY 1 cut(s) 2114
BssECI CCNNGG 3 cut(s) 1187, 3072, 3299
BssNAI GTATAC 1 cut(s) 989
BssT1I CCWWGG 1 cut(s) 1187
Bst1107I GTATAC 1 cut(s) 989
Bst2UI CCWGG 6 cut(s) 268, 1251, 1303, 1740, 3005, 3074
Bst4CI ACNGT 5 cut(s) 986, 1223, 1715, 2804, 3300
Bst6I CTCTTC 1 cut(s) 1452
BstAFI CTTAAG 1 cut(s) 2278
BstC8I GCNNGC 1 cut(s) 1402
BstDSI CCRYGG 1 cut(s) 3299
BstEII GGTNACC 1 cut(s) 1288
BstF5I GGATG 8 cut(s) 1521, 2051, 2137, 2404, 2728, 3058, 3314, 3319
BstHHI GCGC 2 cut(s) 781, 2061
BstMWI GCNNNNNNNGC 9 cut(s) 166, 514, 668, 677, 764, 1352, 2456, 3365, 3374
BstNI CCWGG 6 cut(s) 268, 1251, 1303, 1740, 3005, 3074
BstNSI RCATGY 5 cut(s) 584, 2156, 2299, 2303, 2558
BstPI GGTNACC 1 cut(s) 1288
BstSCI CCNGG 7 cut(s) 266, 1249, 1301, 1738, 3003, 3072, 3202
BstSFI CTRYAG 5 cut(s) 672, 1329, 1714, 2034, 2893
BstSLI GKGCMC 1 cut(s) 2831
BstV2I GAAGAC 1 cut(s) 1695
BstX2I RGATCY 3 cut(s) 526, 880, 1429
BstYI RGATCY 3 cut(s) 526, 880, 1429
BstZ17I GTATAC 1 cut(s) 989
Bsu15I ATCGAT 1 cut(s) 1809
BsuI GTATCC 1 cut(s) 3273
BsuTUI ATCGAT 1 cut(s) 1809
BtgI CCRYGG 1 cut(s) 3299
BtgZI GCGATG 1 cut(s) 2915
BtsCI GGATG 8 cut(s) 1521, 2051, 2137, 2404, 2728, 3058, 3314, 3319
BtsI GCAGTG 1 cut(s) 430
BtsIMutI CAGTG 7 cut(s) 430, 905, 1219, 1273, 1711, 2475, 2809
Cac8I GCNNGC 1 cut(s) 1402
CaiI CAGNNNCTG 3 cut(s) 140, 680, 817
CciI TCATGA 1 cut(s) 1503
CfoI GCGC 2 cut(s) 781, 2061
Cfr10I RCCGGY 1 cut(s) 2114
Cfr13I GGNCC 4 cut(s) 773, 2729, 2927, 2966
ClaI ATCGAT 1 cut(s) 1809
Csp6I GTAC 5 cut(s) 26, 285, 1122, 1620, 2029
CspAI ACCGGT 1 cut(s) 2114
CviQI GTAC 5 cut(s) 26, 285, 1122, 1620, 2029
DraI TTTAAA 4 cut(s) 279, 1597, 1842, 2239
DrdI GACNNNNNNGTC 1 cut(s) 480
DriI GACNNNNNGTC 1 cut(s) 933
DseDI GACNNNNNNGTC 1 cut(s) 480
Eam1104I CTCTTC 1 cut(s) 1452
Eam1105I GACNNNNNGTC 1 cut(s) 933
EarI CTCTTC 1 cut(s) 1452
Ecl136II GAGCTC 1 cut(s) 624
Eco130I CCWWGG 1 cut(s) 1187
Eco24I GRGCYC 1 cut(s) 626
Eco31I GGTCTC 2 cut(s) 2084, 2387
Eco32I GATATC 2 cut(s) 1904, 1948
Eco47I GGWCC 4 cut(s) 773, 2729, 2927, 2966
Eco53kI GAGCTC 1 cut(s) 624
Eco57I CTGAAG 4 cut(s) 1404, 2307, 2958, 2970
Eco88I CYCGRG 1 cut(s) 1767
Eco91I GGTNACC 1 cut(s) 1288
EcoICRI GAGCTC 1 cut(s) 624
EcoO109I RGGNCCY 1 cut(s) 773
EcoO65I GGTNACC 1 cut(s) 1288
EcoRI GAATTC 1 cut(s) 1078
EcoRII CCWGG 6 cut(s) 266, 1249, 1301, 1738, 3003, 3072
EcoRV GATATC 2 cut(s) 1904, 1948
EcoT14I CCWWGG 1 cut(s) 1187
EcoT22I ATGCAT 3 cut(s) 176, 874, 2301
EcoT38I GRGCYC 1 cut(s) 626
ErhI CCWWGG 1 cut(s) 1187
FalI AAGNNNNNCTT 8 cut(s) 358, 390, 1449, 1481, 1643, 1675, 2640, 2672
FaqI GGGAC 1 cut(s) 363
FauI CCCGC 2 cut(s) 153, 3201
FbaI TGATCA 1 cut(s) 2143
FblI GTMKAC 5 cut(s) 988, 1655, 2292, 2403, 2626
FokI GGATG 8 cut(s) 1528, 2058, 2124, 2411, 2735, 3065, 3321, 3326
FriOI GRGCYC 1 cut(s) 626
GlaI GCGC 2 cut(s) 780, 2060
GsaI CCCAGC 2 cut(s) 252, 3279
GsuI CTGGAG 1 cut(s) 612
HapII CCGG 2 cut(s) 2115, 3204
HhaI GCGC 2 cut(s) 781, 2061
Hin6I GCGC 2 cut(s) 779, 2059
HinP1I GCGC 2 cut(s) 779, 2059
HincII GTYRAC 2 cut(s) 1747, 2504
HindII GTYRAC 2 cut(s) 1747, 2504
HindIII AAGCTT 1 cut(s) 2322
HpaII CCGG 2 cut(s) 2115, 3204
HphI GGTGA 4 cut(s) 49, 695, 2876, 3353
Hpy99I CGWCG 1 cut(s) 120
HpyAV CCTTC 8 cut(s) 385, 1471, 2495, 2526, 2695, 3116, 3299, 3362
HpyCH4III ACNGT 5 cut(s) 986, 1223, 1715, 2804, 3300
HpyCH4IV ACGT 4 cut(s) 115, 432, 1701, 2981
HpyF10VI GCNNNNNNNGC 9 cut(s) 166, 514, 668, 677, 764, 1352, 2456, 3365, 3374
HpySE526I ACGT 4 cut(s) 115, 432, 1701, 2981
HspAI GCGC 2 cut(s) 779, 2059
KpnI GGTACC 2 cut(s) 29, 1125
Ksp22I TGATCA 1 cut(s) 2143
LguI GCTCTTC 1 cut(s) 1452
LmnI GCTCC 6 cut(s) 962, 1034, 1330, 1412, 1576, 2194
LweI GCATC 8 cut(s) 314, 448, 1509, 2036, 2713, 2720, 3225, 3364
MaeII ACGT 4 cut(s) 115, 432, 1701, 2981
MaeIII GTNAC 5 cut(s) 490, 1067, 1093, 1288, 1378
MboII GAAGA 9 cut(s) 80, 633, 1397, 1469, 1700, 1787, 1790, 2120, 3383
MfeI CAATTG 2 cut(s) 692, 1545
MflI RGATCY 3 cut(s) 526, 880, 1429
MhlI GDGCHC 2 cut(s) 626, 2831
MlyI GAGTC 4 cut(s) 62, 452, 487, 2538
MmeI TCCRAC 1 cut(s) 2993
Mph1103I ATGCAT 3 cut(s) 176, 874, 2301
MroXI GAANNNNTTC 3 cut(s) 44, 2458, 2484
MslI CAYNNNNRTG 7 cut(s) 63, 585, 1508, 2304, 2721, 2984, 3215
MspA1I CMGCKG 1 cut(s) 1404
MspCI CTTAAG 1 cut(s) 2278
MspI CCGG 2 cut(s) 2115, 3204
MspR9I CCNGG 7 cut(s) 268, 1251, 1303, 1740, 3005, 3074, 3204
MunI CAATTG 2 cut(s) 692, 1545
Mva1269I GAATGC 1 cut(s) 407
MvaI CCWGG 6 cut(s) 268, 1251, 1303, 1740, 3005, 3074
MwoI GCNNNNNNNGC 9 cut(s) 166, 514, 668, 677, 764, 1352, 2456, 3365, 3374
NciI CCSGG 1 cut(s) 3204
NlaIV GGNNCC 7 cut(s) 27, 774, 958, 1123, 1431, 2967, 3208
NmeAIII GCCGAG 1 cut(s) 2618
NmuCI GTSAC 1 cut(s) 490
NsiI ATGCAT 3 cut(s) 176, 874, 2301
NspI RCATGY 5 cut(s) 584, 2156, 2299, 2303, 2558
OliI CACNNNNGTG 1 cut(s) 2984
PaeR7I CTCGAG 1 cut(s) 1767
PagI TCATGA 1 cut(s) 1503
PciI ACATGT 3 cut(s) 580, 2152, 2554
PciSI GCTCTTC 1 cut(s) 1452
PctI GAATGC 1 cut(s) 407
PdmI GAANNNNTTC 3 cut(s) 44, 2458, 2484
PflFI GACNNNGTC 2 cut(s) 735, 2804
PflMI CCANNNNNTGG 2 cut(s) 425, 1439
PfoI TCCNGGA 2 cut(s) 1249, 3003
PinAI ACCGGT 1 cut(s) 2114
PleI GAGTC 4 cut(s) 61, 451, 487, 2538
PpsI GAGTC 4 cut(s) 61, 451, 487, 2538
PpuMI RGGWCCY 1 cut(s) 773
PscI ACATGT 3 cut(s) 580, 2152, 2554
PshBI ATTAAT 1 cut(s) 911
PsiI TTATAA 2 cut(s) 98, 2660
Psp124BI GAGCTC 1 cut(s) 626
Psp1406I AACGTT 1 cut(s) 432
Psp5II RGGWCCY 1 cut(s) 773
Psp6I CCWGG 6 cut(s) 266, 1249, 1301, 1738, 3003, 3072
PspEI GGTNACC 1 cut(s) 1288
PspFI CCCAGC 2 cut(s) 248, 3275
PspGI CCWGG 6 cut(s) 266, 1249, 1301, 1738, 3003, 3072
PspN4I GGNNCC 7 cut(s) 27, 774, 958, 1123, 1431, 2967, 3208
PspPI GGNCC 4 cut(s) 773, 2729, 2927, 2966
PspPPI RGGWCCY 1 cut(s) 773
PsrI GAACNNNNNNTAC 2 cut(s) 3030, 3062
PstI CTGCAG 2 cut(s) 676, 2038
PstNI CAGNNNCTG 3 cut(s) 140, 680, 817
PsuI RGATCY 3 cut(s) 526, 880, 1429
PsyI GACNNNGTC 2 cut(s) 735, 2804
PvuII CAGCTG 1 cut(s) 1404
RsaI GTAC 5 cut(s) 27, 286, 1123, 1621, 2030
RsaNI GTAC 5 cut(s) 26, 285, 1122, 1620, 2029
RseI CAYNNNNRTG 7 cut(s) 63, 585, 1508, 2304, 2721, 2984, 3215
SacI GAGCTC 1 cut(s) 626
SapI GCTCTTC 1 cut(s) 1452
Sau96I GGNCC 4 cut(s) 773, 2729, 2927, 2966
ScaI AGTACT 1 cut(s) 1621
SchI GAGTC 4 cut(s) 62, 452, 487, 2538
ScrFI CCNGG 7 cut(s) 268, 1251, 1303, 1740, 3005, 3074, 3204
SduI GDGCHC 2 cut(s) 626, 2831
SfaNI GCATC 8 cut(s) 314, 448, 1509, 2036, 2713, 2720, 3225, 3364
SfcI CTRYAG 5 cut(s) 672, 1329, 1714, 2034, 2893
Sfr274I CTCGAG 1 cut(s) 1767
SinI GGWCC 4 cut(s) 773, 2729, 2927, 2966
SlaI CTCGAG 1 cut(s) 1767
SmiMI CAYNNNNRTG 7 cut(s) 63, 585, 1508, 2304, 2721, 2984, 3215
SmlI CTYRAG 4 cut(s) 1767, 2278, 2507, 2738
SmoI CTYRAG 4 cut(s) 1767, 2278, 2507, 2738
SsiI CCGC 4 cut(s) 160, 2581, 3194, 3339
SspI AATATT 2 cut(s) 2245, 2525
SstI GAGCTC 1 cut(s) 626
StyD4I CCNGG 7 cut(s) 266, 1249, 1301, 1738, 3003, 3072, 3202
StyI CCWWGG 1 cut(s) 1187
TaaI ACNGT 5 cut(s) 986, 1223, 1715, 2804, 3300
TaiI ACGT 4 cut(s) 118, 435, 1704, 2984
TaqI TCGA 7 cut(s) 805, 962, 1197, 1768, 1809, 2040, 3214
TatI WGTACW 1 cut(s) 1619
TscAI CASTG 7 cut(s) 430, 905, 1226, 1273, 1718, 2482, 2809
TseFI GTSAC 1 cut(s) 490
Tsp45I GTSAC 1 cut(s) 490
TspDTI ATGAA 9 cut(s) 17, 603, 1049, 1404, 1520, 1641, 2535, 2591, 2714
TspGWI ACGGA 1 cut(s) 2358
TspRI CASTG 7 cut(s) 430, 905, 1226, 1273, 1718, 2482, 2809
Tth111I GACNNNGTC 2 cut(s) 735, 2804
Van91I CCANNNNNTGG 2 cut(s) 425, 1439
Vha464I CTTAAG 1 cut(s) 2278
VpaK11BI GGWCC 4 cut(s) 773, 2729, 2927, 2966
VspI ATTAAT 1 cut(s) 911
XapI RAATTY 9 cut(s) 84, 224, 799, 1078, 1628, 1637, 1959, 1967, 3085
XbaI TCTAGA 2 cut(s) 883, 2749
XceI RCATGY 5 cut(s) 584, 2156, 2299, 2303, 2558
XhoI CTCGAG 1 cut(s) 1767
XmiI GTMKAC 5 cut(s) 988, 1655, 2292, 2403, 2626
XmnI GAANNNNTTC 3 cut(s) 44, 2458, 2484
ZrmI AGTACT 1 cut(s) 1621
Zsp2I ATGCAT 3 cut(s) 176, 874, 2301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.