Secretory pathway protein Sec39
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24350 AT5G24350 AT5G24350 |
| fragaria_vesca | FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 |
| malus_domestica | MD01G1225300.v1.1 MD07G1295800.v1.1 |
| prunus_persica | Prupe.2G315300_v2.0.a1 Prupe.2G315300_v2.0.a1 |
| pyrus_communis | pycom01g23370 pycom07g26850 pycom07g26860 |
| rosa_chinensis | RchiOBHm_Chr1g0381961 |
| rosa_laevigata | RLG00000026198 |
| rosa_multiflora | Rmu_sc0010238.1_g000002 Rmu_sc0017430.1_g000002 Rmu_sc0017430.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00278310 |
| rosa_rugosa | Rorug01G0432500 |
| rosa_samantha | Rh1AG455700 Rh1BG412800 Rh1CG427700 Rh1DG445100 |
| rosa_wichuraiana | Rw1G041350 Rw1G041500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1409, 2786, 5348 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 880, 3168 |
| Acc36I | ACCTGC | 2 cut(s) | 1686, 2166 |
| Acc65I | GGTACC | 2 cut(s) | 2713, 3809 |
| AccB1I | GGYRCC | 2 cut(s) | 2713, 3809 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 3113, 4127 |
| AccBSI | CCGCTC | 2 cut(s) | 635, 2187 |
| AccI | GTMKAC | 5 cut(s) | 3676, 4343, 4980, 5091, 5314 |
| AccIII | TCCGGA | 1 cut(s) | 7084 |
| AciI | CCGC | 9 cut(s) | 309, 633, 1051, 1627, 2187, 2669, 2848, 5269, 5882 |
| AclI | AACGTT | 2 cut(s) | 3120, 7188 |
| AcoI | YGGCCR | 1 cut(s) | 2051 |
| AcuI | CTGAAG | 7 cut(s) | 1623, 2444, 4092, 4995, 5646, 5658, 6357 |
| AflII | CTTAAG | 2 cut(s) | 1640, 4966 |
| AflIII | ACRYGT | 3 cut(s) | 3268, 4840, 5242 |
| AgeI | ACCGGT | 1 cut(s) | 4802 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3621 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1513, 1545 |
| AleI | CACNNNNGTG | 2 cut(s) | 2545, 5672 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 7109, 7141 |
| Alw21I | GWGCWC | 4 cut(s) | 2542, 2564, 3314, 6012 |
| Alw44I | GTGCAC | 3 cut(s) | 2538, 2560, 6008 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2828, 3368, 3505 |
| Ama87I | CYCGRG | 2 cut(s) | 1679, 4455 |
| Aor13HI | TCCGGA | 1 cut(s) | 7084 |
| AoxI | GGCC | 4 cut(s) | 1057, 2051, 2674, 6380 |
| ApaLI | GTGCAC | 3 cut(s) | 2538, 2560, 6008 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 952, 956, 984, 988, 1713, 1745, 1867, 1899 |
| AseI | ATTAAT | 2 cut(s) | 2061, 3599 |
| AsiGI | ACCGGT | 1 cut(s) | 4802 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1863, 2732, 5146, 5172 |
| Asp718I | GGTACC | 2 cut(s) | 2713, 3809 |
| AspA2I | CCTAGG | 1 cut(s) | 2038 |
| AspLEI | GCGC | 2 cut(s) | 3469, 4749 |
| AspS9I | GGNCC | 8 cut(s) | 1023, 1517, 1902, 3461, 5417, 5615, 5654, 6380 |
| AsuC2I | CCSGG | 1 cut(s) | 5892 |
| AsuNHI | GCTAGC | 1 cut(s) | 814 |
| AvaI | CYCGRG | 2 cut(s) | 1679, 4455 |
| AvaII | GGWCC | 7 cut(s) | 1023, 1517, 1902, 3461, 5417, 5615, 5654 |
| AvrII | CCTAGG | 1 cut(s) | 2038 |
| BaeGI | GKGCMC | 4 cut(s) | 2542, 2564, 5519, 6012 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2705, 2738 |
| BalI | TGGCCA | 1 cut(s) | 2053 |
| BamHI | GGATCC | 2 cut(s) | 568, 4117 |
| BanI | GGYRCC | 2 cut(s) | 2713, 3809 |
| BanII | GRGCYC | 1 cut(s) | 3314 |
| BbsI | GAAGAC | 1 cut(s) | 4383 |
| Bbv12I | GWGCWC | 4 cut(s) | 2542, 2564, 3314, 6012 |
| BbvCI | CCTCAGC | 1 cut(s) | 7023 |
| BceAI | ACGGC | 1 cut(s) | 56 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 2759, 2793, 2798, 2832, 6967, 7001 |
| BciVI | GTATCC | 1 cut(s) | 5961 |
| BclI | TGATCA | 2 cut(s) | 1378, 4831 |
| BcnI | CCSGG | 1 cut(s) | 5892 |
| BfrI | CTTAAG | 2 cut(s) | 1640, 4966 |
| BfuAI | ACCTGC | 2 cut(s) | 1686, 2166 |
| BfuI | GTATCC | 1 cut(s) | 5961 |
| BglII | AGATCT | 3 cut(s) | 868, 1196, 3568 |
| BlnI | CCTAGG | 1 cut(s) | 2038 |
| BlpI | GCTNAGC | 1 cut(s) | 7004 |
| BmcAI | AGTACT | 2 cut(s) | 4309, 6909 |
| Bme18I | GGWCC | 7 cut(s) | 1023, 1517, 1902, 3461, 5417, 5615, 5654 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3621 |
| BmeT110I | CYCGRG | 2 cut(s) | 1679, 4455 |
| BmgT120I | GGNCC | 8 cut(s) | 1023, 1517, 1902, 3461, 5417, 5615, 5654, 6380 |
| BmrI | ACTGGG | 2 cut(s) | 3162, 6355 |
| BmtI | GCTAGC | 1 cut(s) | 818 |
| BmuI | ACTGGG | 2 cut(s) | 3162, 6355 |
| BpiI | GAAGAC | 1 cut(s) | 4383 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1891, 1923, 2135, 2167, 3168, 3200 |
| BpmI | CTGGAG | 7 cut(s) | 530, 770, 1306, 2669, 3300, 6194, 7067 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3084, 7023 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 7004 |
| BpuEI | CTTGAG | 4 cut(s) | 2337, 5216, 5411, 6577 |
| BpuMI | CCSGG | 1 cut(s) | 5892 |
| Bsa29I | ATCGAT | 1 cut(s) | 4497 |
| BsaAI | YACGTR | 1 cut(s) | 889 |
| BsaBI | GATNNNNATC | 2 cut(s) | 196, 2373 |
| BsaI | GGTCTC | 2 cut(s) | 4772, 5075 |
| BsaJI | CCNNGG | 9 cut(s) | 1365, 1435, 1895, 1983, 2038, 3875, 5760, 5987, 6141 |
| BsaWI | WCCGGW | 2 cut(s) | 4802, 7084 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 743, 773, 2888, 2918, 4874, 4904, 5480, 5510 |
| Bse118I | RCCGGY | 1 cut(s) | 4802 |
| Bse3DI | GCAATG | 5 cut(s) | 1929, 2864, 5330, 7109, 7172 |
| Bse8I | GATNNNNATC | 2 cut(s) | 196, 2373 |
| BseAI | TCCGGA | 1 cut(s) | 7084 |
| BseCI | ATCGAT | 1 cut(s) | 4497 |
| BseDI | CCNNGG | 9 cut(s) | 1365, 1435, 1895, 1983, 2038, 3875, 5760, 5987, 6141 |
| BseJI | GATNNNNATC | 2 cut(s) | 196, 2373 |
| BseMI | GCAATG | 5 cut(s) | 1929, 2864, 5330, 7109, 7172 |
| BseRI | GAGGAG | 4 cut(s) | 66, 3637, 4677, 4696 |
| BseSI | GKGCMC | 4 cut(s) | 2542, 2564, 5519, 6012 |
| BseYI | CCCAGC | 2 cut(s) | 2936, 5963 |
| BsgI | GTGCAG | 5 cut(s) | 1544, 1727, 2144, 4593, 7073 |
| BshFI | GGCC | 4 cut(s) | 1059, 2053, 2676, 6382 |
| BshNI | GGYRCC | 2 cut(s) | 2713, 3809 |
| BshTI | ACCGGT | 1 cut(s) | 4802 |
| BshVI | ATCGAT | 1 cut(s) | 4497 |
| BsiHKAI | GWGCWC | 4 cut(s) | 2542, 2564, 3314, 6012 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1679, 4455 |
| BsiSI | CCGG | 3 cut(s) | 4803, 5892, 7085 |
| BslFI | GGGAC | 5 cut(s) | 310, 639, 1888, 3051, 6362 |
| BsmBI | CGTCTC | 1 cut(s) | 26 |
| BsmFI | GGGAC | 5 cut(s) | 310, 639, 1888, 3051, 6362 |
| BsmI | GAATGC | 1 cut(s) | 3095 |
| BsnI | GGCC | 4 cut(s) | 1059, 2053, 2676, 6382 |
| Bso31I | GGTCTC | 2 cut(s) | 4772, 5075 |
| BsoBI | CYCGRG | 2 cut(s) | 1679, 4455 |
| Bsp1286I | GDGCHC | 5 cut(s) | 2542, 2564, 3314, 5519, 6012 |
| Bsp13I | TCCGGA | 1 cut(s) | 7084 |
| Bsp1407I | TGTACA | 3 cut(s) | 493, 592, 1549 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 7004 |
| Bsp19I | CCATGG | 1 cut(s) | 6141 |
| BspACI | CCGC | 9 cut(s) | 309, 633, 1051, 1627, 2187, 2669, 2848, 5269, 5882 |
| BspANI | GGCC | 4 cut(s) | 1059, 2053, 2676, 6382 |
| BspDI | ATCGAT | 1 cut(s) | 4497 |
| BspEI | TCCGGA | 1 cut(s) | 7084 |
| BspHI | TCATGA | 3 cut(s) | 352, 1990, 4191 |
| BspMAI | CTGCAG | 3 cut(s) | 2386, 3364, 4726 |
| BspMI | ACCTGC | 2 cut(s) | 1686, 2166 |
| BspOI | GCTAGC | 1 cut(s) | 818 |
| BspQI | GCTCTTC | 1 cut(s) | 4140 |
| BspT107I | GGYRCC | 2 cut(s) | 2713, 3809 |
| BspTI | CTTAAG | 2 cut(s) | 1640, 4966 |
| BspTNI | GGTCTC | 2 cut(s) | 4772, 5075 |
| BsrBI | CCGCTC | 2 cut(s) | 635, 2187 |
| BsrDI | GCAATG | 5 cut(s) | 1929, 2864, 5330, 7109, 7172 |
| BsrFI | RCCGGY | 1 cut(s) | 4802 |
| BsrGI | TGTACA | 3 cut(s) | 493, 592, 1549 |
| BssAI | RCCGGY | 1 cut(s) | 4802 |
| BssECI | CCNNGG | 9 cut(s) | 1365, 1435, 1895, 1983, 2038, 3875, 5760, 5987, 6141 |
| BssNAI | GTATAC | 1 cut(s) | 3677 |
| BssT1I | CCWWGG | 5 cut(s) | 1365, 1435, 2038, 3875, 6141 |
| Bst1107I | GTATAC | 1 cut(s) | 3677 |
| Bst6I | CTCTTC | 4 cut(s) | 2081, 2268, 4140, 6917 |
| BstAFI | CTTAAG | 2 cut(s) | 1640, 4966 |
| BstAUI | TGTACA | 3 cut(s) | 493, 592, 1549 |
| BstBAI | YACGTR | 1 cut(s) | 889 |
| BstC8I | GCNNGC | 6 cut(s) | 681, 816, 1750, 2462, 4090, 6246 |
| BstDSI | CCRYGG | 2 cut(s) | 5987, 6141 |
| BstEII | GGTNACC | 2 cut(s) | 1996, 3976 |
| BstHHI | GCGC | 2 cut(s) | 3469, 4749 |
| BstNSI | RCATGY | 9 cut(s) | 230, 936, 3272, 4844, 4987, 4991, 5246, 6431, 7166 |
| BstPI | GGTNACC | 2 cut(s) | 1996, 3976 |
| BstSLI | GKGCMC | 4 cut(s) | 2542, 2564, 5519, 6012 |
| BstV2I | GAAGAC | 1 cut(s) | 4383 |
| BstX2I | RGATCY | 9 cut(s) | 568, 868, 1196, 1310, 2042, 3214, 3568, 4117, 6884 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 856 |
| BstYI | RGATCY | 9 cut(s) | 568, 868, 1196, 1310, 2042, 3214, 3568, 4117, 6884 |
| BstZ17I | GTATAC | 1 cut(s) | 3677 |
| Bsu15I | ATCGAT | 1 cut(s) | 4497 |
| BsuI | GTATCC | 1 cut(s) | 5961 |
| BsuRI | GGCC | 4 cut(s) | 1059, 2053, 2676, 6382 |
| BsuTUI | ATCGAT | 1 cut(s) | 4497 |
| BtgI | CCRYGG | 2 cut(s) | 5987, 6141 |
| BtgZI | GCGATG | 2 cut(s) | 5603, 6984 |
| BtsI | GCAGTG | 5 cut(s) | 116, 2039, 3118, 6422, 6644 |
| BveI | ACCTGC | 2 cut(s) | 1686, 2166 |
| Cac8I | GCNNGC | 6 cut(s) | 681, 816, 1750, 2462, 4090, 6246 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2828, 3368, 3505 |
| CciI | TCATGA | 3 cut(s) | 352, 1990, 4191 |
| CfoI | GCGC | 2 cut(s) | 3469, 4749 |
| Cfr10I | RCCGGY | 1 cut(s) | 4802 |
| Cfr13I | GGNCC | 8 cut(s) | 1023, 1517, 1902, 3461, 5417, 5615, 5654, 6380 |
| ClaI | ATCGAT | 1 cut(s) | 4497 |
| CseI | GACGC | 1 cut(s) | 1793 |
| CsiI | ACCWGGT | 1 cut(s) | 338 |
| CspAI | ACCGGT | 1 cut(s) | 4802 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 6615, 6650 |
| DraI | TTTAAA | 7 cut(s) | 1788, 2248, 2967, 4285, 4530, 4927, 6478 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 880, 3168 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3621 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 880, 3168 |
| EaeI | YGGCCR | 1 cut(s) | 2051 |
| Eam1104I | CTCTTC | 4 cut(s) | 2081, 2268, 4140, 6917 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3621 |
| EarI | CTCTTC | 4 cut(s) | 2081, 2268, 4140, 6917 |
| EciI | GGCGGA | 1 cut(s) | 2684 |
| Ecl136II | GAGCTC | 1 cut(s) | 3312 |
| Eco130I | CCWWGG | 5 cut(s) | 1365, 1435, 2038, 3875, 6141 |
| Eco24I | GRGCYC | 1 cut(s) | 3314 |
| Eco31I | GGTCTC | 2 cut(s) | 4772, 5075 |
| Eco32I | GATATC | 2 cut(s) | 4592, 4636 |
| Eco47I | GGWCC | 7 cut(s) | 1023, 1517, 1902, 3461, 5417, 5615, 5654 |
| Eco53kI | GAGCTC | 1 cut(s) | 3312 |
| Eco57I | CTGAAG | 7 cut(s) | 1623, 2444, 4092, 4995, 5646, 5658, 6357 |
| Eco88I | CYCGRG | 2 cut(s) | 1679, 4455 |
| Eco91I | GGTNACC | 2 cut(s) | 1996, 3976 |
| EcoICRI | GAGCTC | 1 cut(s) | 3312 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1902, 3461, 6380 |
| EcoO65I | GGTNACC | 2 cut(s) | 1996, 3976 |
| EcoRI | GAATTC | 1 cut(s) | 3766 |
| EcoRV | GATATC | 2 cut(s) | 4592, 4636 |
| EcoT14I | CCWWGG | 5 cut(s) | 1365, 1435, 2038, 3875, 6141 |
| EcoT22I | ATGCAT | 6 cut(s) | 2864, 3562, 4989, 7000, 7111, 7168 |
| EcoT38I | GRGCYC | 1 cut(s) | 3314 |
| ErhI | CCWWGG | 5 cut(s) | 1365, 1435, 2038, 3875, 6141 |
| Esp3I | CGTCTC | 1 cut(s) | 26 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 3046, 3078, 4137, 4169, 4331, 4363, 5328, 5360 |
| FaqI | GGGAC | 5 cut(s) | 310, 639, 1888, 3051, 6362 |
| FauI | CCCGC | 2 cut(s) | 2841, 5889 |
| FauNDI | CATATG | 1 cut(s) | 1879 |
| FbaI | TGATCA | 2 cut(s) | 1378, 4831 |
| FblI | GTMKAC | 5 cut(s) | 3676, 4343, 4980, 5091, 5314 |
| FriOI | GRGCYC | 1 cut(s) | 3314 |
| GlaI | GCGC | 2 cut(s) | 3468, 4748 |
| GsaI | CCCAGC | 2 cut(s) | 2940, 5967 |
| GsuI | CTGGAG | 7 cut(s) | 530, 770, 1306, 2669, 3300, 6194, 7067 |
| HaeIII | GGCC | 4 cut(s) | 1059, 2053, 2676, 6382 |
| HapII | CCGG | 3 cut(s) | 4803, 5892, 7085 |
| HgaI | GACGC | 1 cut(s) | 1793 |
| HhaI | GCGC | 2 cut(s) | 3469, 4749 |
| Hin6I | GCGC | 2 cut(s) | 3467, 4747 |
| HinP1I | GCGC | 2 cut(s) | 3467, 4747 |
| HincII | GTYRAC | 7 cut(s) | 143, 655, 1009, 1886, 2364, 4435, 5192 |
| HindII | GTYRAC | 7 cut(s) | 143, 655, 1009, 1886, 2364, 4435, 5192 |
| HindIII | AAGCTT | 3 cut(s) | 466, 910, 5010 |
| HpaII | CCGG | 3 cut(s) | 4803, 5892, 7085 |
| Hpy99I | CGWCG | 2 cut(s) | 2808, 6974 |
| HpyCH4IV | ACGT | 6 cut(s) | 888, 2803, 3120, 4389, 5669, 7188 |
| HpySE526I | ACGT | 6 cut(s) | 888, 2803, 3120, 4389, 5669, 7188 |
| HspAI | GCGC | 2 cut(s) | 3467, 4747 |
| Kpn2I | TCCGGA | 1 cut(s) | 7084 |
| KpnI | GGTACC | 2 cut(s) | 2717, 3813 |
| Ksp22I | TGATCA | 2 cut(s) | 1378, 4831 |
| LguI | GCTCTTC | 1 cut(s) | 4140 |
| MabI | ACCWGGT | 1 cut(s) | 338 |
| MaeII | ACGT | 6 cut(s) | 888, 2803, 3120, 4389, 5669, 7188 |
| MbiI | CCGCTC | 2 cut(s) | 635, 2187 |
| MfeI | CAATTG | 2 cut(s) | 3380, 4233 |
| MflI | RGATCY | 9 cut(s) | 568, 868, 1196, 1310, 2042, 3214, 3568, 4117, 6884 |
| MhlI | GDGCHC | 5 cut(s) | 2542, 2564, 3314, 5519, 6012 |
| MlsI | TGGCCA | 1 cut(s) | 2053 |
| MluNI | TGGCCA | 1 cut(s) | 2053 |
| MmeI | TCCRAC | 6 cut(s) | 1050, 1455, 1495, 1647, 5681, 7183 |
| Mox20I | TGGCCA | 1 cut(s) | 2053 |
| Mph1103I | ATGCAT | 6 cut(s) | 2864, 3562, 4989, 7000, 7111, 7168 |
| MroI | TCCGGA | 1 cut(s) | 7084 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1863, 2732, 5146, 5172 |
| MscI | TGGCCA | 1 cut(s) | 2053 |
| Msp20I | TGGCCA | 1 cut(s) | 2053 |
| MspA1I | CMGCKG | 2 cut(s) | 4092, 6182 |
| MspCI | CTTAAG | 2 cut(s) | 1640, 4966 |
| MspI | CCGG | 3 cut(s) | 4803, 5892, 7085 |
| MunI | CAATTG | 2 cut(s) | 3380, 4233 |
| Mva1269I | GAATGC | 1 cut(s) | 3095 |
| NciI | CCSGG | 1 cut(s) | 5892 |
| NcoI | CCATGG | 1 cut(s) | 6141 |
| NdeI | CATATG | 1 cut(s) | 1879 |
| NheI | GCTAGC | 1 cut(s) | 814 |
| NmeAIII | GCCGAG | 2 cut(s) | 1789, 5306 |
| NmuCI | GTSAC | 7 cut(s) | 688, 951, 958, 1063, 1658, 1996, 3178 |
| NsiI | ATGCAT | 6 cut(s) | 2864, 3562, 4989, 7000, 7111, 7168 |
| NspI | RCATGY | 9 cut(s) | 230, 936, 3272, 4844, 4987, 4991, 5246, 6431, 7166 |
| OliI | CACNNNNGTG | 2 cut(s) | 2545, 5672 |
| PaeR7I | CTCGAG | 1 cut(s) | 4455 |
| PagI | TCATGA | 3 cut(s) | 352, 1990, 4191 |
| PciI | ACATGT | 3 cut(s) | 3268, 4840, 5242 |
| PciSI | GCTCTTC | 1 cut(s) | 4140 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 648 |
| PctI | GAATGC | 1 cut(s) | 3095 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1863, 2732, 5146, 5172 |
| PflFI | GACNNNGTC | 2 cut(s) | 3423, 5492 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 3113, 4127 |
| PfoI | TCCNGGA | 3 cut(s) | 3937, 5691, 6369 |
| PinAI | ACCGGT | 1 cut(s) | 4802 |
| Ppu21I | YACGTR | 1 cut(s) | 889 |
| PpuMI | RGGWCCY | 2 cut(s) | 1902, 3461 |
| PscI | ACATGT | 3 cut(s) | 3268, 4840, 5242 |
| PshBI | ATTAAT | 2 cut(s) | 2061, 3599 |
| PsiI | TTATAA | 3 cut(s) | 1409, 2786, 5348 |
| Psp124BI | GAGCTC | 1 cut(s) | 3314 |
| Psp1406I | AACGTT | 2 cut(s) | 3120, 7188 |
| Psp5II | RGGWCCY | 2 cut(s) | 1902, 3461 |
| PspEI | GGTNACC | 2 cut(s) | 1996, 3976 |
| PspFI | CCCAGC | 2 cut(s) | 2936, 5963 |
| PspPI | GGNCC | 8 cut(s) | 1023, 1517, 1902, 3461, 5417, 5615, 5654, 6380 |
| PspPPI | RGGWCCY | 2 cut(s) | 1902, 3461 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 5718, 5750 |
| PstI | CTGCAG | 3 cut(s) | 2386, 3364, 4726 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2828, 3368, 3505 |
| PsuI | RGATCY | 9 cut(s) | 568, 868, 1196, 1310, 2042, 3214, 3568, 4117, 6884 |
| PsyI | GACNNNGTC | 2 cut(s) | 3423, 5492 |
| PvuII | CAGCTG | 2 cut(s) | 4092, 6182 |
| SacI | GAGCTC | 1 cut(s) | 3314 |
| SapI | GCTCTTC | 1 cut(s) | 4140 |
| Sau96I | GGNCC | 8 cut(s) | 1023, 1517, 1902, 3461, 5417, 5615, 5654, 6380 |
| ScaI | AGTACT | 2 cut(s) | 4309, 6909 |
| SduI | GDGCHC | 5 cut(s) | 2542, 2564, 3314, 5519, 6012 |
| SexAI | ACCWGGT | 1 cut(s) | 338 |
| Sfr274I | CTCGAG | 1 cut(s) | 4455 |
| SinI | GGWCC | 7 cut(s) | 1023, 1517, 1902, 3461, 5417, 5615, 5654 |
| SlaI | CTCGAG | 1 cut(s) | 4455 |
| SmlI | CTYRAG | 7 cut(s) | 1640, 2352, 4455, 4966, 5195, 5426, 6556 |
| SmoI | CTYRAG | 7 cut(s) | 1640, 2352, 4455, 4966, 5195, 5426, 6556 |
| SsiI | CCGC | 9 cut(s) | 309, 633, 1051, 1627, 2187, 2669, 2848, 5269, 5882 |
| SspI | AATATT | 4 cut(s) | 1333, 4933, 5213, 7018 |
| SstI | GAGCTC | 1 cut(s) | 3314 |
| StyI | CCWWGG | 5 cut(s) | 1365, 1435, 2038, 3875, 6141 |
| TaiI | ACGT | 6 cut(s) | 891, 2806, 3123, 4392, 5672, 7191 |
| TatI | WGTACW | 9 cut(s) | 493, 592, 1454, 1489, 1549, 2582, 4307, 6089, 6907 |
| TauI | GCSGC | 1 cut(s) | 312 |
| TseFI | GTSAC | 7 cut(s) | 688, 951, 958, 1063, 1658, 1996, 3178 |
| Tsp45I | GTSAC | 7 cut(s) | 688, 951, 958, 1063, 1658, 1996, 3178 |
| TspGWI | ACGGA | 2 cut(s) | 1303, 5046 |
| Tth111I | GACNNNGTC | 2 cut(s) | 3423, 5492 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 3113, 4127 |
| Vha464I | CTTAAG | 2 cut(s) | 1640, 4966 |
| VneI | GTGCAC | 3 cut(s) | 2538, 2560, 6008 |
| VpaK11BI | GGWCC | 7 cut(s) | 1023, 1517, 1902, 3461, 5417, 5615, 5654 |
| VspI | ATTAAT | 2 cut(s) | 2061, 3599 |
| XbaI | TCTAGA | 2 cut(s) | 3571, 5437 |
| XceI | RCATGY | 9 cut(s) | 230, 936, 3272, 4844, 4987, 4991, 5246, 6431, 7166 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2684, 6049 |
| XhoI | CTCGAG | 1 cut(s) | 4455 |
| XmaJI | CCTAGG | 1 cut(s) | 2038 |
| XmiI | GTMKAC | 5 cut(s) | 3676, 4343, 4980, 5091, 5314 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1863, 2732, 5146, 5172 |
| ZrmI | AGTACT | 2 cut(s) | 4309, 6909 |
| Zsp2I | ATGCAT | 6 cut(s) | 2864, 3562, 4989, 7000, 7111, 7168 |