Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0014029

Physical Location & Seq

Genomic Coordinates Forward (+)

29728790 .. 29729985

Gene Structure 1196 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G317700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 672 bp

ATGTCTTCAACTTTGGCTTTGTCATCTTCATCACCTCTGCTATCAACCAAAGCTAGGTCTTCAATCAAAACATATGTCACTGCGCCGTGCTCAGCCACCTTTCCTTCGCGGTTGCATAGGCTGCCCGTGGTGAGAGCTCAGGCTGGTGGAGATGGCAAGCTGGACGTGCAAGTCAATCAGGGCAACCAAGGAACTGAAGTCGAGAGGAGGCCAAGGAGGTTGGCTGTCGACATTTCACCTTTTGGTTTATTGGATCCCATCTCCCCAGTGAGGACCATGCGCCAAATGCTGGACACAGTGGACAGGCTCCTGGAGGACACTGTGACATTGCCAGGCAGAAACAGAGCATCAGGGGAAGTACGTGCGCCTTGGGACATCAAAGATGATGAACATGAGATCAAAATGAGGTTTGACATGCCCGGCCTCTCCAAGGAGGATGTCAAGGTGGCTGTAGAAGATGATGTTCTTGTTATAAAGGGAGAGCACAAAAAGGAAGAAAGTGGTGATGATTCATGGTCGAGCAGGAGCTTTAGCTCCTATAATACCCGCCTTCAGCTTCCTGATAATTGTGAGAAGGACAACATAAAGGCAGAGCTTAAGAATGGTGTTCTTTACATATCCATTCCCAAAACTAAAGTTGAACGCAAGGTCATTGATGTTGCTATCCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006355 GO:0006950 GO:0006979 GO:0006996 GO:0008150 GO:0009266 GO:0009295 GO:0009314 GO:0009408 GO:0009416 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009636 GO:0009642 GO:0009644 GO:0009657 GO:0009658 GO:0009889 GO:0009987 GO:0010035 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032991 GO:0042221 GO:0042493 GO:0042542 GO:0042644 GO:0042646 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043621 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0101031 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

HSP20

Protein Analysis

224

Amino Acids

24.8

Weight (kDa)

7.75

Isoelectric Point (pI)

47.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014029)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27670
fragaria_vesca	FvH4_6g02120 FvH4_7g32800
malus_domestica	MD01G1227600.v1.1 MD07G1298000.v1.1
prunus_persica	Prupe.2G317700_v2.0.a1
pyrus_communis	pycom07g27040
rosa_chinensis	RchiOBHm_Chr1g0382761
rosa_laevigata	RLG00000026163
rosa_multiflora	Rmu_co8395491.1_g000001
rosa_roxburghii	Rroxscaffold_4G00277930
rosa_rugosa	Rorug01G0435600
rosa_samantha	Rh1AG460800 Rh1BG417600 Rh1CG431200 Rh1DG449800
rosa_wichuraiana	Rw1G041080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	473
AasI	GACNNNNNNGTC	1 cut(s)	170
AccB7I	CCANNNNNTGG	1 cut(s)	289
AccI	GTMKAC	1 cut(s)	228
AccII	CGCG	1 cut(s)	109
AciI	CCGC	2 cut(s)	109, 547
AclWI	GGATC	2 cut(s)	248, 261
AcuI	CTGAAG	2 cut(s)	216, 536
AfaI	GTAC	1 cut(s)	360
AfiI	CCNNNNNNNGG	4 cut(s)	54, 270, 289, 430
AflII	CTTAAG	1 cut(s)	596
AgsI	TTSAA	3 cut(s)	9, 63, 641
AjiI	CACGTC	1 cut(s)	166
AjnI	CCWGG	2 cut(s)	309, 331
AluBI	AGCT	7 cut(s)	53, 137, 160, 528, 534, 556, 595
AluI	AGCT	7 cut(s)	53, 137, 160, 528, 534, 556, 595
Alw21I	GWGCWC	3 cut(s)	92, 139, 486
AlwI	GGATC	2 cut(s)	248, 261
AoxI	GGCC	2 cut(s)	209, 421
ApeKI	GCWGC	1 cut(s)	121
ArsI	GACNNNNNNTTYG	2 cut(s)	60, 92
AspLEI	GCGC	3 cut(s)	85, 282, 367
AspS9I	GGNCC	1 cut(s)	273
AsuC2I	CCSGG	1 cut(s)	420
AsuHPI	GGTGA	4 cut(s)	24, 142, 228, 515
AvaII	GGWCC	1 cut(s)	273
BamHI	GGATCC	1 cut(s)	253
BanII	GRGCYC	1 cut(s)	139
BbsI	GAAGAC	1 cut(s)	51
Bbv12I	GWGCWC	3 cut(s)	92, 139, 486
BbvI	GCAGC	1 cut(s)	108
BccI	CCATC	2 cut(s)	146, 266
BceAI	ACGGC	1 cut(s)	70
BciT130I	CCWGG	2 cut(s)	311, 333
BcnI	CCSGG	1 cut(s)	420
BfaI	CTAG	1 cut(s)	54
BfmI	CTRYAG	1 cut(s)	450
BfrI	CTTAAG	1 cut(s)	596
BisI	GCNGC	1 cut(s)	122
BlpI	GCTNAGC	1 cut(s)	91
BlsI	GCNGC	1 cut(s)	123
Bme1390I	CCNGG	3 cut(s)	311, 333, 420
Bme18I	GGWCC	1 cut(s)	273
BmgBI	CACGTC	1 cut(s)	166
BmgT120I	GGNCC	1 cut(s)	273
BmiI	GGNNCC	2 cut(s)	255, 308
BmrFI	CCNGG	3 cut(s)	311, 333, 420
BmrI	ACTGGG	1 cut(s)	260
BmsI	GCATC	1 cut(s)	356
BmuI	ACTGGG	1 cut(s)	260
BpiI	GAAGAC	1 cut(s)	51
BpmI	CTGGAG	1 cut(s)	332
Bpu10I	CCTNAGC	1 cut(s)	138
Bpu1102I	GCTNAGC	1 cut(s)	91
BpuMI	CCSGG	1 cut(s)	420
BsaAI	YACGTR	1 cut(s)	362
BsaJI	CCNNGG	5 cut(s)	126, 187, 212, 368, 429
Bsc4I	CCNNNNNNNGG	4 cut(s)	54, 270, 289, 430
Bse1I	ACTGG	2 cut(s)	266, 667
Bse3DI	GCAATG	1 cut(s)	326
BseBI	CCWGG	2 cut(s)	311, 333
BseDI	CCNNGG	5 cut(s)	126, 187, 212, 368, 429
BseGI	GGATG	1 cut(s)	442
BseLI	CCNNNNNNNGG	4 cut(s)	54, 270, 289, 430
BseMI	GCAATG	1 cut(s)	326
BseMII	CTCAG	2 cut(s)	105, 152
BseNI	ACTGG	2 cut(s)	266, 667
BseRI	GAGGAG	1 cut(s)	220
BseXI	GCAGC	1 cut(s)	108
Bsh1236I	CGCG	1 cut(s)	109
BshFI	GGCC	2 cut(s)	211, 423
BsiHKAI	GWGCWC	3 cut(s)	92, 139, 486
BsiSI	CCGG	1 cut(s)	420
BslFI	GGGAC	1 cut(s)	386
BslI	CCNNNNNNNGG	4 cut(s)	54, 270, 289, 430
BsmFI	GGGAC	1 cut(s)	386
BsnI	GGCC	2 cut(s)	211, 423
Bsp1286I	GDGCHC	3 cut(s)	92, 139, 486
Bsp143I	GATC	2 cut(s)	253, 396
Bsp1720I	GCTNAGC	1 cut(s)	91
BspACI	CCGC	2 cut(s)	109, 547
BspANI	GGCC	2 cut(s)	211, 423
BspCNI	CTCAG	2 cut(s)	104, 151
BspFNI	CGCG	1 cut(s)	109
BspLI	GGNNCC	2 cut(s)	255, 308
BspPI	GGATC	2 cut(s)	248, 261
BspTI	CTTAAG	1 cut(s)	596
BsrDI	GCAATG	1 cut(s)	326
BsrI	ACTGG	2 cut(s)	266, 667
BssECI	CCNNGG	5 cut(s)	126, 187, 212, 368, 429
BssMI	GATC	2 cut(s)	253, 396
BssT1I	CCWWGG	4 cut(s)	187, 212, 368, 429
Bst2UI	CCWGG	2 cut(s)	311, 333
Bst4CI	ACNGT	2 cut(s)	298, 322
BstAFI	CTTAAG	1 cut(s)	596
BstAPI	GCANNNNNTGC	1 cut(s)	121
BstBAI	YACGTR	1 cut(s)	362
BstC8I	GCNNGC	1 cut(s)	158
BstDEI	CTNAG	2 cut(s)	91, 138
BstDSI	CCRYGG	1 cut(s)	126
BstENI	CCTNNNNNAGG	1 cut(s)	428
BstF5I	GGATG	1 cut(s)	442
BstFNI	CGCG	1 cut(s)	109
BstHHI	GCGC	3 cut(s)	85, 282, 367
BstKTI	GATC	2 cut(s)	256, 399
BstMBI	GATC	2 cut(s)	253, 396
BstMWI	GCNNNNNNNGC	3 cut(s)	121, 166, 286
BstNI	CCWGG	2 cut(s)	311, 333
BstNSI	RCATGY	1 cut(s)	418
BstSCI	CCNGG	3 cut(s)	309, 331, 418
BstSFI	CTRYAG	1 cut(s)	450
BstUI	CGCG	1 cut(s)	109
BstV1I	GCAGC	1 cut(s)	108
BstV2I	GAAGAC	1 cut(s)	51
BstX2I	RGATCY	1 cut(s)	253
BstYI	RGATCY	1 cut(s)	253
BsuRI	GGCC	2 cut(s)	211, 423
BtgI	CCRYGG	1 cut(s)	126
BtrI	CACGTC	1 cut(s)	166
BtsCI	GGATG	1 cut(s)	442
BtsI	GCAGTG	1 cut(s)	78
BtsIMutI	CAGTG	4 cut(s)	78, 273, 303, 318
Cac8I	GCNNGC	1 cut(s)	158
CfoI	GCGC	3 cut(s)	85, 282, 367
Cfr13I	GGNCC	1 cut(s)	273
Csp6I	GTAC	1 cut(s)	359
CviAII	CATG	4 cut(s)	277, 392, 415, 513
CviQI	GTAC	1 cut(s)	359
DdeI	CTNAG	2 cut(s)	91, 138
DpnI	GATC	2 cut(s)	255, 398
DpnII	GATC	2 cut(s)	253, 396
DrdI	GACNNNNNNGTC	1 cut(s)	170
DseDI	GACNNNNNNGTC	1 cut(s)	170
Ecl136II	GAGCTC	1 cut(s)	137
Eco130I	CCWWGG	4 cut(s)	187, 212, 368, 429
Eco24I	GRGCYC	1 cut(s)	139
Eco47I	GGWCC	1 cut(s)	273
Eco53kI	GAGCTC	1 cut(s)	137
Eco57I	CTGAAG	2 cut(s)	216, 536
EcoICRI	GAGCTC	1 cut(s)	137
EcoNI	CCTNNNNNAGG	1 cut(s)	428
EcoRII	CCWGG	2 cut(s)	309, 331
EcoT14I	CCWWGG	4 cut(s)	187, 212, 368, 429
EcoT38I	GRGCYC	1 cut(s)	139
ErhI	CCWWGG	4 cut(s)	187, 212, 368, 429
FaeI	CATG	4 cut(s)	280, 395, 418, 516
FaqI	GGGAC	1 cut(s)	386
FatI	CATG	4 cut(s)	276, 391, 414, 512
FauI	CCCGC	1 cut(s)	554
FauNDI	CATATG	1 cut(s)	73
FblI	GTMKAC	1 cut(s)	228
Fnu4HI	GCNGC	1 cut(s)	122
FokI	GGATG	1 cut(s)	449
FriOI	GRGCYC	1 cut(s)	139
Fsp4HI	GCNGC	1 cut(s)	122
FspBI	CTAG	1 cut(s)	54
GlaI	GCGC	3 cut(s)	84, 281, 366
GluI	GCNGC	1 cut(s)	122
GsuI	CTGGAG	1 cut(s)	332
HaeIII	GGCC	2 cut(s)	211, 423
HapII	CCGG	1 cut(s)	420
HhaI	GCGC	3 cut(s)	85, 282, 367
Hin1II	CATG	4 cut(s)	280, 395, 418, 516
Hin6I	GCGC	3 cut(s)	83, 280, 365
HinP1I	GCGC	3 cut(s)	83, 280, 365
HincII	GTYRAC	1 cut(s)	229
HindII	GTYRAC	1 cut(s)	229
HinfI	GANTC	1 cut(s)	509
HpaII	CCGG	1 cut(s)	420
HphI	GGTGA	4 cut(s)	24, 142, 228, 515
Hpy166II	GTNNAC	2 cut(s)	229, 301
Hpy188III	TCNNGA	2 cut(s)	202, 560
Hpy8I	GTNNAC	2 cut(s)	229, 301
HpyAV	CCTTC	3 cut(s)	114, 560, 568
HpyCH4III	ACNGT	2 cut(s)	298, 322
HpyCH4IV	ACGT	2 cut(s)	165, 361
HpyCH4V	TGCA	2 cut(s)	115, 169
HpyF10VI	GCNNNNNNNGC	3 cut(s)	121, 166, 286
HpyF3I	CTNAG	2 cut(s)	91, 138
HpySE526I	ACGT	2 cut(s)	165, 361
Hsp92II	CATG	4 cut(s)	280, 395, 418, 516
HspAI	GCGC	3 cut(s)	83, 280, 365
Kzo9I	GATC	2 cut(s)	253, 396
LmnI	GCTCC	3 cut(s)	312, 525, 539
Lsp1109I	GCAGC	1 cut(s)	108
LweI	GCATC	1 cut(s)	356
MaeI	CTAG	1 cut(s)	54
MaeII	ACGT	2 cut(s)	165, 361
MaeIII	GTNAC	2 cut(s)	76, 322
MalI	GATC	2 cut(s)	255, 398
MboI	GATC	2 cut(s)	253, 396
MboII	GAAGA	4 cut(s)	18, 51, 467, 506
MflI	RGATCY	1 cut(s)	253
MhlI	GDGCHC	3 cut(s)	92, 139, 486
MluCI	AATT	1 cut(s)	565
MnlI	CCTC	9 cut(s)	45, 198, 201, 210, 264, 307, 399, 427, 434
MseI	TTAA	1 cut(s)	597
MspCI	CTTAAG	1 cut(s)	596
MspI	CCGG	1 cut(s)	420
MspR9I	CCNGG	3 cut(s)	311, 333, 420
MvaI	CCWGG	2 cut(s)	311, 333
MvnI	CGCG	1 cut(s)	109
MwoI	GCNNNNNNNGC	3 cut(s)	121, 166, 286
NciI	CCSGG	1 cut(s)	420
NdeI	CATATG	1 cut(s)	73
NdeII	GATC	2 cut(s)	253, 396
NlaIII	CATG	4 cut(s)	280, 395, 418, 516
NlaIV	GGNNCC	2 cut(s)	255, 308
NmuCI	GTSAC	2 cut(s)	76, 322
NspI	RCATGY	1 cut(s)	418
PfeI	GAWTC	1 cut(s)	509
PflMI	CCANNNNNTGG	1 cut(s)	289
PfoI	TCCNGGA	1 cut(s)	309
PkrI	GCNGC	1 cut(s)	123
Ppu21I	YACGTR	1 cut(s)	362
PsiI	TTATAA	1 cut(s)	473
Psp124BI	GAGCTC	1 cut(s)	139
Psp6I	CCWGG	2 cut(s)	309, 331
PspGI	CCWGG	2 cut(s)	309, 331
PspN4I	GGNNCC	2 cut(s)	255, 308
PspPI	GGNCC	1 cut(s)	273
PsuI	RGATCY	1 cut(s)	253
RsaI	GTAC	1 cut(s)	360
RsaNI	GTAC	1 cut(s)	359
SacI	GAGCTC	1 cut(s)	139
SalI	GTCGAC	1 cut(s)	227
SaqAI	TTAA	1 cut(s)	597
SatI	GCNGC	1 cut(s)	122
Sau3AI	GATC	2 cut(s)	253, 396
Sau96I	GGNCC	1 cut(s)	273
ScrFI	CCNGG	3 cut(s)	311, 333, 420
SduI	GDGCHC	3 cut(s)	92, 139, 486
SfaNI	GCATC	1 cut(s)	356
SfcI	CTRYAG	1 cut(s)	450
SinI	GGWCC	1 cut(s)	273
SmlI	CTYRAG	1 cut(s)	596
SmoI	CTYRAG	1 cut(s)	596
Sse9I	AATT	1 cut(s)	565
SsiI	CCGC	2 cut(s)	109, 547
SspMI	CTAG	1 cut(s)	54
SstI	GAGCTC	1 cut(s)	139
StyD4I	CCNGG	3 cut(s)	309, 331, 418
StyI	CCWWGG	4 cut(s)	187, 212, 368, 429
TaaI	ACNGT	2 cut(s)	298, 322
TaiI	ACGT	2 cut(s)	168, 364
TaqI	TCGA	3 cut(s)	201, 228, 518
TasI	AATT	1 cut(s)	565
TfiI	GAWTC	1 cut(s)	509
Tru1I	TTAA	1 cut(s)	597
Tru9I	TTAA	1 cut(s)	597
TscAI	CASTG	4 cut(s)	85, 273, 303, 325
TseFI	GTSAC	2 cut(s)	76, 322
TseI	GCWGC	1 cut(s)	121
Tsp45I	GTSAC	2 cut(s)	76, 322
TspDTI	ATGAA	3 cut(s)	18, 402, 501
TspRI	CASTG	4 cut(s)	85, 273, 303, 325
Van91I	CCANNNNNTGG	1 cut(s)	289
Vha464I	CTTAAG	1 cut(s)	596
VpaK11BI	GGWCC	1 cut(s)	273
XagI	CCTNNNNNAGG	1 cut(s)	428
XceI	RCATGY	1 cut(s)	418
XmiI	GTMKAC	1 cut(s)	228
XspI	CTAG	1 cut(s)	54

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.