Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0014029

Physical Location & Seq

Genomic Coordinates Forward (+)

53478399 .. 53480389

Gene Structure 1991 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0435600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGCATTCTCTGAAATGGGTTCTCTTGGATTTGATTGGTAAATGCAAAACCTTGAGTTGCTTCAAGCAAATCCATGCAAAGACTGTAACTTCAGGCCTGGCTTGCAATGACTTGGTTGCCACCAATGTTGTTAAGTTCTTGGGAAAATCTGCAACCCATTTCGATTACGCTTGTGATTTTCTGAAACAAGTTGACTGGCGTGTGAACTCTTTCCCGTTTAACATGTTGATCTCTGGCTATGCTAATGGTGAAAATGCAGGGGAGGCGGTTTTGGTTTATAGAAGGATAGTTAGAGATGGGTTTATGCCTGATATGTTTACTATTCCGGCGGTTTTGAAATCTTGTGTTAAGTTTTTGGGGATGGGAGAGGGTAGACAGGTCCATAGTGTGGTTGTGAAGATGGGTTTTCAGTGGGATGTGTATGTTCAGAACTCGCTTGTGCATTTCTATAGTGTTTGTGGTGAGTGTGGTAATGCTTGTAAGGTGTTTGATGAAATGCGTGTGAGAGATGTGGTGTCTTGGACTGGTTTGGTGTCCGGGCATGTGAAGGCAGGGTTGTTTGGTGAGGCCGTGTCTTTGTTTTTGAGGATGGATGTGAAGCCGAATGTGGCGACTTTTGTTAGTGTGGTTGTGGCTTGTGGGCGGATGGGGTATTTGAATGTGGGGAAGGGGGTTCATGGATTGATTTTGAAGCATTCGTTGGGGATGGACTTGGTGGTGGGCAATGCTGTTGTGGATATGTATGTTAAGTGTGAGAGTTTGTGTGAGGCGAAGCGGGTTTTTGATGAGCTTCCCGAAAGGGACATTGTGTCTTGGACTAGCTTGATAAGTGGATACGTGCAGTGTAAACGTCCGAGGGAGTCGCTGGATTTGTTTTGCAGCATGCAGACTATGGGAATAGAGCCTGATAAGATTATACTTTCCAGTGTGCTTTCAGCTTGTGCCAGTCTTGGGGCTCTTGATTATGGTAGATGGGTCCATGAGTATATTGATCGTAAGGGTATCAAATGGGATGTACATATTGGAACAGCTATGATCGACATGTATGCCAAGTGTGGCTGTATAAACATGGCATTGCGTACTTTCAGTGAATTGCCTTGCGGGAATGTCTCTACTTGGAATGCATTGCTAGGTGGTTTAGCCATGCATGGACATGGGCACGAGGCACTCAAAAAGTTTGAAGAAATGACTAGGTCTGGCATCAGGCCAAATGCAGTTACTTTTCTAGCTGTCTTGACAGCTTGCTGTCATTCTGGTTTGATTGATGAAGGCCGTGGATACTTTCATCAGATGATAAGTGCACCTCATAATCTCTCTCCAAGATTAGAACACTATGGATGCATGGTTGATCTGCTCTGTCGGGCTGGACTCCTCGATGAAGCTCAGAAATTGATAAACACTATGCCAATGCAACCTGATGTGCTGATATTGGGAGCTCTTCTAAGTGCTTGTAAGGCCAAAAATGATGCTGAGCTCTCTCAAGAAATATTAGACCGTCTCCTGCAACTTGAGTGGCAAGATAGTGGGGTTTATGTGCTTCTATCAAACATTTTTGCTGCTAATAAAAGATGGGCTGATGCGACAAGGATAAGGAGGTTGATGAAGAAGAGAGGTATACAGAAGGCCCCTGGCTCAAGTGTCATAGAGGTGGACGGTAAGGCTCACAAATTTTTGGTTGGGGATACTAGCCACCCTCAGAATGAGGATATACATGTAGTGTTAGACATCCTTGCTAATACAAGCCAATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006355 GO:0006950 GO:0006979 GO:0006996 GO:0008150 GO:0009266 GO:0009295 GO:0009314 GO:0009408 GO:0009416 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009636 GO:0009642 GO:0009644 GO:0009657 GO:0009658 GO:0009889 GO:0009987 GO:0010035 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032991 GO:0042221 GO:0042493 GO:0042542 GO:0042644 GO:0042646 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043621 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0101031 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

HSP20

Protein Analysis

583

Amino Acids

64.47

Weight (kDa)

7.97

Isoelectric Point (pI)

38.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	267 - 315	9e-09	PPR repeat family
PPR	PF01535	270 - 300	2.9e-07	PPR repeat
PPR_2	PF13041	369 - 417	4.8e-13	PPR repeat family
PPR_3	PF13812	369 - 415	8.6e-06	Pentatricopeptide repeat domain
PPR	PF01535	371 - 401	5.7e-06	PPR repeat
PPR_1	PF12854	438 - 468	9.4e-06	PPR repeat
E_motif	PF20431	488 - 549	3e-18	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014029)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27670
fragaria_vesca	FvH4_6g02120 FvH4_7g32800
malus_domestica	MD01G1227600.v1.1 MD07G1298000.v1.1
prunus_persica	Prupe.2G317700_v2.0.a1
pyrus_communis	pycom07g27040
rosa_chinensis	RchiOBHm_Chr1g0382761
rosa_laevigata	RLG00000026163
rosa_multiflora	Rmu_co8395491.1_g000001
rosa_roxburghii	Rroxscaffold_4G00277930
rosa_rugosa	Rorug01G0435600
rosa_samantha	Rh1AG460800 Rh1BG417600 Rh1CG431200 Rh1DG449800
rosa_wichuraiana	Rw1G041080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	388
AccI	GTMKAC	2 cut(s)	373, 1615
AciI	CCGC	5 cut(s)	266, 329, 643, 775, 1101
AcsI	RAATTY	1 cut(s)	1667
AcuI	CTGAAG	1 cut(s)	75
AfaI	GTAC	2 cut(s)	1017, 1081
AfiI	CCNNNNNNNGG	2 cut(s)	388, 951
AflIII	ACRYGT	3 cut(s)	222, 1041, 1711
AgsI	TTSAA	5 cut(s)	64, 337, 658, 691, 1181
AhdI	GACNNNNNGTC	1 cut(s)	808
AjnI	CCWGG	2 cut(s)	96, 1627
AjuI	GAANNNNNNNTTGG	2 cut(s)	683, 715
AluBI	AGCT	9 cut(s)	790, 822, 938, 1031, 1229, 1241, 1382, 1436, 1474
AluI	AGCT	9 cut(s)	790, 822, 938, 1031, 1229, 1241, 1382, 1436, 1474
Alw21I	GWGCWC	3 cut(s)	1303, 1438, 1476
Alw26I	GTCTC	2 cut(s)	1114, 1502
Alw44I	GTGCAC	1 cut(s)	1299
AoxI	GGCC	6 cut(s)	94, 567, 1205, 1270, 1455, 1623
ApaLI	GTGCAC	1 cut(s)	1299
ApeKI	GCWGC	2 cut(s)	879, 1556
ApoI	RAATTY	1 cut(s)	1667
Asp700I	GAANNNNTTC	1 cut(s)	209
AspS9I	GGNCC	3 cut(s)	379, 976, 1624
AsuC2I	CCSGG	1 cut(s)	538
AsuHPI	GGTGA	3 cut(s)	260, 473, 575
AvaII	GGWCC	2 cut(s)	379, 976
BaeGI	GKGCMC	2 cut(s)	1161, 1303
BanII	GRGCYC	3 cut(s)	958, 1438, 1476
BauI	CACGAG	1 cut(s)	1160
Bbv12I	GWGCWC	3 cut(s)	1303, 1438, 1476
BbvI	GCAGC	2 cut(s)	891, 1543
BccI	CCATC	8 cut(s)	290, 355, 394, 583, 640, 700, 966, 1563
BceAI	ACGGC	2 cut(s)	554, 1257
BcgI	CGANNNNNNTGC	2 cut(s)	1028, 1062
BciT130I	CCWGG	2 cut(s)	98, 1629
BciVI	GTATCC	3 cut(s)	827, 1271, 1675
BcnI	CCSGG	1 cut(s)	538
BcoDI	GTCTC	2 cut(s)	1114, 1502
BfaI	CTAG	5 cut(s)	819, 1130, 1191, 1226, 1686
BfmI	CTRYAG	1 cut(s)	448
BfuI	GTATCC	3 cut(s)	827, 1271, 1675
BisI	GCNGC	2 cut(s)	880, 1557
BlpI	GCTNAGC	1 cut(s)	1470
BlsI	GCNGC	2 cut(s)	881, 1558
Bme1390I	CCNGG	3 cut(s)	98, 538, 1629
Bme18I	GGWCC	2 cut(s)	379, 976
BmeRI	GACNNNNNGTC	1 cut(s)	808
BmgT120I	GGNCC	3 cut(s)	379, 976, 1624
BmiI	GGNNCC	2 cut(s)	977, 1626
BmrFI	CCNGG	3 cut(s)	98, 538, 1629
BmsI	GCATC	4 cut(s)	1209, 1328, 1456, 1567
Bpu1102I	GCTNAGC	1 cut(s)	1470
BpuEI	CTTGAG	4 cut(s)	73, 1464, 1529, 1618
BpuMI	CCSGG	1 cut(s)	538
BsaAI	YACGTR	1 cut(s)	838
BsaJI	CCNNGG	3 cut(s)	854, 1273, 1627
Bsc4I	CCNNNNNNNGG	2 cut(s)	388, 951
Bse1I	ACTGG	4 cut(s)	200, 529, 924, 945
Bse3DI	GCAATG	4 cut(s)	112, 730, 1073, 1124
BseBI	CCWGG	2 cut(s)	98, 1629
BseDI	CCNNGG	3 cut(s)	854, 1273, 1627
BseGI	GGATG	9 cut(s)	366, 421, 594, 598, 651, 711, 1018, 1343, 1725
BseLI	CCNNNNNNNGG	2 cut(s)	388, 951
BseMI	GCAATG	4 cut(s)	112, 730, 1073, 1124
BseMII	CTCAG	3 cut(s)	1397, 1461, 1709
BseNI	ACTGG	4 cut(s)	200, 529, 924, 945
BseRI	GAGGAG	1 cut(s)	1361
BseSI	GKGCMC	2 cut(s)	1161, 1303
BseXI	GCAGC	2 cut(s)	891, 1543
BsgI	GTGCAG	1 cut(s)	860
BshFI	GGCC	6 cut(s)	96, 569, 1207, 1272, 1457, 1625
BsiHKAI	GWGCWC	3 cut(s)	1303, 1438, 1476
BsiSI	CCGG	2 cut(s)	326, 537
BslFI	GGGAC	1 cut(s)	815
BslI	CCNNNNNNNGG	2 cut(s)	388, 951
BsmAI	GTCTC	2 cut(s)	1114, 1502
BsmBI	CGTCTC	1 cut(s)	1502
BsmFI	GGGAC	1 cut(s)	815
BsmI	GAATGC	3 cut(s)	4, 694, 1126
BsnI	GGCC	6 cut(s)	96, 569, 1207, 1272, 1457, 1625
Bsp1286I	GDGCHC	5 cut(s)	958, 1161, 1303, 1438, 1476
Bsp1407I	TGTACA	1 cut(s)	1015
Bsp143I	GATC	4 cut(s)	228, 991, 1035, 1348
Bsp1720I	GCTNAGC	1 cut(s)	1470
BspACI	CCGC	5 cut(s)	266, 329, 643, 775, 1101
BspANI	GGCC	6 cut(s)	96, 569, 1207, 1272, 1457, 1625
BspCNI	CTCAG	3 cut(s)	1396, 1462, 1708
BspLI	GGNNCC	2 cut(s)	977, 1626
BspQI	GCTCTTC	1 cut(s)	1443
BsrDI	GCAATG	4 cut(s)	112, 730, 1073, 1124
BsrGI	TGTACA	1 cut(s)	1015
BsrI	ACTGG	4 cut(s)	200, 529, 924, 945
BssECI	CCNNGG	3 cut(s)	854, 1273, 1627
BssMI	GATC	4 cut(s)	228, 991, 1035, 1348
BssNAI	GTATAC	1 cut(s)	1616
BssSI	CACGAG	1 cut(s)	1160
Bst1107I	GTATAC	1 cut(s)	1616
Bst2BI	CACGAG	1 cut(s)	1160
Bst2UI	CCWGG	2 cut(s)	98, 1629
Bst4CI	ACNGT	3 cut(s)	85, 1496, 1655
Bst6I	CTCTTC	2 cut(s)	1443, 1601
BstAUI	TGTACA	1 cut(s)	1015
BstBAI	YACGTR	1 cut(s)	838
BstC8I	GCNNGC	3 cut(s)	103, 884, 1243
BstDEI	CTNAG	4 cut(s)	1383, 1442, 1470, 1695
BstDSI	CCRYGG	1 cut(s)	1273
BstF5I	GGATG	9 cut(s)	366, 421, 594, 598, 651, 711, 1018, 1343, 1725
BstKTI	GATC	4 cut(s)	231, 994, 1038, 1351
BstMAI	GTCTC	2 cut(s)	1114, 1502
BstMBI	GATC	4 cut(s)	228, 991, 1035, 1348
BstMWI	GCNNNNNNNGC	3 cut(s)	102, 263, 1454
BstNI	CCWGG	2 cut(s)	98, 1629
BstNSI	RCATGY	5 cut(s)	226, 545, 886, 1045, 1715
BstSCI	CCNGG	3 cut(s)	96, 536, 1627
BstSFI	CTRYAG	1 cut(s)	448
BstSLI	GKGCMC	2 cut(s)	1161, 1303
BstV1I	GCAGC	2 cut(s)	891, 1543
BstZ17I	GTATAC	1 cut(s)	1616
BsuI	GTATCC	3 cut(s)	827, 1271, 1675
BsuRI	GGCC	6 cut(s)	96, 569, 1207, 1272, 1457, 1625
BtgI	CCRYGG	1 cut(s)	1273
BtsCI	GGATG	9 cut(s)	366, 421, 594, 598, 651, 711, 1018, 1343, 1725
BtsI	GCAGTG	1 cut(s)	848
BtsIMutI	CAGTG	4 cut(s)	416, 848, 931, 1093
Cac8I	GCNNGC	3 cut(s)	103, 884, 1243
Cfr13I	GGNCC	3 cut(s)	379, 976, 1624
Csp6I	GTAC	2 cut(s)	1016, 1080
CspCI	CAANNNNNGTGG	4 cut(s)	109, 144, 1493, 1528
CviQI	GTAC	2 cut(s)	1016, 1080
DdeI	CTNAG	4 cut(s)	1383, 1442, 1470, 1695
DpnI	GATC	4 cut(s)	230, 993, 1037, 1350
DpnII	GATC	4 cut(s)	228, 991, 1035, 1348
DriI	GACNNNNNGTC	1 cut(s)	808
Eam1104I	CTCTTC	2 cut(s)	1443, 1601
Eam1105I	GACNNNNNGTC	1 cut(s)	808
EarI	CTCTTC	2 cut(s)	1443, 1601
EciI	GGCGGA	1 cut(s)	658
Ecl136II	GAGCTC	2 cut(s)	1436, 1474
Eco147I	AGGCCT	1 cut(s)	96
Eco24I	GRGCYC	3 cut(s)	958, 1438, 1476
Eco47I	GGWCC	2 cut(s)	379, 976
Eco53kI	GAGCTC	2 cut(s)	1436, 1474
Eco57I	CTGAAG	1 cut(s)	75
EcoICRI	GAGCTC	2 cut(s)	1436, 1474
EcoO109I	RGGNCCY	1 cut(s)	1624
EcoRII	CCWGG	2 cut(s)	96, 1627
EcoT22I	ATGCAT	4 cut(s)	6, 1126, 1149, 1343
EcoT38I	GRGCYC	3 cut(s)	958, 1438, 1476
Esp3I	CGTCTC	1 cut(s)	1502
FalI	AAGNNNNNCTT	1 cut(s)	1732
FaqI	GGGAC	1 cut(s)	815
FauI	CCCGC	2 cut(s)	768, 1094
FblI	GTMKAC	2 cut(s)	373, 1615
Fnu4HI	GCNGC	2 cut(s)	880, 1557
FokI	GGATG	9 cut(s)	373, 428, 601, 605, 658, 718, 1025, 1350, 1712
FriOI	GRGCYC	3 cut(s)	958, 1438, 1476
Fsp4HI	GCNGC	2 cut(s)	880, 1557
FspBI	CTAG	5 cut(s)	819, 1130, 1191, 1226, 1686
GluI	GCNGC	2 cut(s)	880, 1557
HaeIII	GGCC	6 cut(s)	96, 569, 1207, 1272, 1457, 1625
HapII	CCGG	2 cut(s)	326, 537
HincII	GTYRAC	1 cut(s)	193
HindII	GTYRAC	1 cut(s)	193
HinfI	GANTC	2 cut(s)	860, 1368
HpaII	CCGG	2 cut(s)	326, 537
HphI	GGTGA	3 cut(s)	260, 473, 575
Hpy166II	GTNNAC	8 cut(s)	193, 205, 318, 374, 848, 1301, 1616, 1651
Hpy188I	TCNGA	7 cut(s)	12, 183, 429, 855, 1290, 1386, 1698
Hpy188III	TCNNGA	4 cut(s)	794, 959, 1234, 1481
Hpy8I	GTNNAC	8 cut(s)	193, 205, 318, 374, 848, 1301, 1616, 1651
HpyAV	CCTTC	5 cut(s)	276, 541, 661, 1262, 1615
HpyCH4III	ACNGT	3 cut(s)	85, 1496, 1655
HpyCH4IV	ACGT	2 cut(s)	837, 850
HpyF10VI	GCNNNNNNNGC	3 cut(s)	102, 263, 1454
HpyF3I	CTNAG	4 cut(s)	1383, 1442, 1470, 1695
HpySE526I	ACGT	2 cut(s)	837, 850
Kzo9I	GATC	4 cut(s)	228, 991, 1035, 1348
LguI	GCTCTTC	1 cut(s)	1443
LmnI	GCTCC	1 cut(s)	1433
Lsp1109I	GCAGC	2 cut(s)	891, 1543
LweI	GCATC	4 cut(s)	1209, 1328, 1456, 1567
MaeI	CTAG	5 cut(s)	819, 1130, 1191, 1226, 1686
MaeII	ACGT	2 cut(s)	837, 850
MaeIII	GTNAC	2 cut(s)	85, 1216
MalI	GATC	4 cut(s)	230, 993, 1037, 1350
MboI	GATC	4 cut(s)	228, 991, 1035, 1348
MboII	GAAGA	5 cut(s)	409, 1193, 1430, 1615, 1618
MhlI	GDGCHC	5 cut(s)	958, 1161, 1303, 1438, 1476
MluCI	AATT	3 cut(s)	1091, 1388, 1667
MlyI	GAGTC	2 cut(s)	869, 1362
Mph1103I	ATGCAT	4 cut(s)	6, 1126, 1149, 1343
MroXI	GAANNNNTTC	1 cut(s)	209
MseI	TTAA	5 cut(s)	132, 219, 348, 747, 1750
MslI	CAYNNNNRTG	2 cut(s)	1152, 1646
MspI	CCGG	2 cut(s)	326, 537
MspR9I	CCNGG	3 cut(s)	98, 538, 1629
Mva1269I	GAATGC	3 cut(s)	4, 694, 1126
MvaI	CCWGG	2 cut(s)	98, 1629
MwoI	GCNNNNNNNGC	3 cut(s)	102, 263, 1454
NciI	CCSGG	1 cut(s)	538
NdeII	GATC	4 cut(s)	228, 991, 1035, 1348
NlaIV	GGNNCC	2 cut(s)	977, 1626
NsiI	ATGCAT	4 cut(s)	6, 1126, 1149, 1343
NspI	RCATGY	5 cut(s)	226, 545, 886, 1045, 1715
PaeI	GCATGC	1 cut(s)	886
PceI	AGGCCT	1 cut(s)	96
PciI	ACATGT	3 cut(s)	222, 1041, 1711
PciSI	GCTCTTC	1 cut(s)	1443
PctI	GAATGC	3 cut(s)	4, 694, 1126
PdmI	GAANNNNTTC	1 cut(s)	209
PflFI	GACNNNGTC	1 cut(s)	1192
PflMI	CCANNNNNTGG	1 cut(s)	388
PkrI	GCNGC	2 cut(s)	881, 1558
PleI	GAGTC	2 cut(s)	868, 1362
PpsI	GAGTC	2 cut(s)	868, 1362
Ppu21I	YACGTR	1 cut(s)	838
PscI	ACATGT	3 cut(s)	222, 1041, 1711
Psp124BI	GAGCTC	2 cut(s)	1438, 1476
Psp6I	CCWGG	2 cut(s)	96, 1627
PspGI	CCWGG	2 cut(s)	96, 1627
PspN4I	GGNNCC	2 cut(s)	977, 1626
PspPI	GGNCC	3 cut(s)	379, 976, 1624
PsyI	GACNNNGTC	1 cut(s)	1192
RsaI	GTAC	2 cut(s)	1017, 1081
RsaNI	GTAC	2 cut(s)	1016, 1080
RseI	CAYNNNNRTG	2 cut(s)	1152, 1646
SacI	GAGCTC	2 cut(s)	1438, 1476
SapI	GCTCTTC	1 cut(s)	1443
SaqAI	TTAA	5 cut(s)	132, 219, 348, 747, 1750
SatI	GCNGC	2 cut(s)	880, 1557
Sau3AI	GATC	4 cut(s)	228, 991, 1035, 1348
Sau96I	GGNCC	3 cut(s)	379, 976, 1624
SchI	GAGTC	2 cut(s)	869, 1362
ScrFI	CCNGG	3 cut(s)	98, 538, 1629
SduI	GDGCHC	5 cut(s)	958, 1161, 1303, 1438, 1476
SfaNI	GCATC	4 cut(s)	1209, 1328, 1456, 1567
SfcI	CTRYAG	1 cut(s)	448
SinI	GGWCC	2 cut(s)	379, 976
SmiMI	CAYNNNNRTG	2 cut(s)	1152, 1646
SmlI	CTYRAG	4 cut(s)	52, 1479, 1508, 1633
SmoI	CTYRAG	4 cut(s)	52, 1479, 1508, 1633
SphI	GCATGC	1 cut(s)	886
Sse9I	AATT	3 cut(s)	1091, 1388, 1667
SseBI	AGGCCT	1 cut(s)	96
SsiI	CCGC	5 cut(s)	266, 329, 643, 775, 1101
SspI	AATATT	1 cut(s)	1488
SspMI	CTAG	5 cut(s)	819, 1130, 1191, 1226, 1686
SstI	GAGCTC	2 cut(s)	1438, 1476
StuI	AGGCCT	1 cut(s)	96
StyD4I	CCNGG	3 cut(s)	96, 536, 1627
TaaI	ACNGT	3 cut(s)	85, 1496, 1655
TaiI	ACGT	2 cut(s)	840, 853
TaqI	TCGA	3 cut(s)	162, 1038, 1374
TasI	AATT	3 cut(s)	1091, 1388, 1667
TatI	WGTACW	1 cut(s)	1015
Tru1I	TTAA	5 cut(s)	132, 219, 348, 747, 1750
Tru9I	TTAA	5 cut(s)	132, 219, 348, 747, 1750
TscAI	CASTG	4 cut(s)	416, 848, 931, 1093
TseI	GCWGC	2 cut(s)	879, 1556
TspDTI	ATGAA	6 cut(s)	507, 665, 1274, 1281, 1392, 1616
TspRI	CASTG	4 cut(s)	416, 848, 931, 1093
Tth111I	GACNNNGTC	1 cut(s)	1192
Van91I	CCANNNNNTGG	1 cut(s)	388
VneI	GTGCAC	1 cut(s)	1299
VpaK11BI	GGWCC	2 cut(s)	379, 976
XapI	RAATTY	1 cut(s)	1667
XceI	RCATGY	5 cut(s)	226, 545, 886, 1045, 1715
XmiI	GTMKAC	2 cut(s)	373, 1615
XmnI	GAANNNNTTC	1 cut(s)	209
XspI	CTAG	5 cut(s)	819, 1130, 1191, 1226, 1686
Zsp2I	ATGCAT	4 cut(s)	6, 1126, 1149, 1343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.