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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03150 AT5G17165 |
| fragaria_vesca | FvH4_7g33540 FvH4_7g33540 |
| malus_domestica | MD01G1233000.v1.1 MD07G1305300.v1.1 |
| prunus_persica | Prupe.2G323400_v2.0.a1 |
| pyrus_communis | pycom01g24140 |
| rosa_chinensis | RchiOBHm_Chr1g0383761 |
| rosa_laevigata | RLG00000026098 |
| rosa_multiflora | Rmu_sc0012471.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00277230 |
| rosa_rugosa | Rorug01G0442300 |
| rosa_samantha | Rh1AG467900 Rh1BG425500 Rh1CG438300 Rh1DG458300 |
| rosa_wichuraiana | Rw1G040450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 254 |
| Acc36I | ACCTGC | 1 cut(s) | 254 |
| AccBSI | CCGCTC | 1 cut(s) | 113 |
| AccI | GTMKAC | 1 cut(s) | 126 |
| AccII | CGCG | 2 cut(s) | 70, 72 |
| AciI | CCGC | 5 cut(s) | 6, 111, 185, 261, 337 |
| AclWI | GGATC | 3 cut(s) | 35, 55, 175 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AfaI | GTAC | 1 cut(s) | 203 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 224 |
| AgsI | TTSAA | 1 cut(s) | 78 |
| AluBI | AGCT | 3 cut(s) | 36, 85, 245 |
| AluI | AGCT | 3 cut(s) | 36, 85, 245 |
| AlwI | GGATC | 3 cut(s) | 35, 55, 175 |
| AoxI | GGCC | 3 cut(s) | 3, 108, 236 |
| ApeKI | GCWGC | 1 cut(s) | 242 |
| AspLEI | GCGC | 2 cut(s) | 70, 72 |
| AspS9I | GGNCC | 2 cut(s) | 108, 236 |
| AsuHPI | GGTGA | 1 cut(s) | 362 |
| BanII | GRGCYC | 1 cut(s) | 211 |
| BbvI | GCAGC | 1 cut(s) | 254 |
| BceAI | ACGGC | 1 cut(s) | 292 |
| BfmI | CTRYAG | 1 cut(s) | 240 |
| BfuAI | ACCTGC | 1 cut(s) | 254 |
| BisI | GCNGC | 3 cut(s) | 6, 111, 243 |
| BlsI | GCNGC | 3 cut(s) | 7, 112, 244 |
| BmcAI | AGTACT | 1 cut(s) | 203 |
| BmgT120I | GGNCC | 2 cut(s) | 108, 236 |
| BmiI | GGNNCC | 4 cut(s) | 210, 280, 307, 335 |
| BmrI | ACTGGG | 2 cut(s) | 214, 234 |
| BmsI | GCATC | 1 cut(s) | 357 |
| BmuI | ACTGGG | 2 cut(s) | 214, 234 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 97, 129, 293, 325 |
| BpmI | CTGGAG | 1 cut(s) | 338 |
| Bpu10I | CCTNAGC | 1 cut(s) | 37 |
| BsaJI | CCNNGG | 1 cut(s) | 309 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 297, 327 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 224 |
| Bse1I | ACTGG | 2 cut(s) | 209, 229 |
| BseDI | CCNNGG | 1 cut(s) | 309 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 224 |
| BseMII | CTCAG | 3 cut(s) | 95, 115, 135 |
| BseNI | ACTGG | 2 cut(s) | 209, 229 |
| BsePI | GCGCGC | 1 cut(s) | 68 |
| BseRI | GAGGAG | 1 cut(s) | 271 |
| BseXI | GCAGC | 1 cut(s) | 254 |
| BseYI | CCCAGC | 1 cut(s) | 158 |
| Bsh1236I | CGCG | 2 cut(s) | 70, 72 |
| BshFI | GGCC | 3 cut(s) | 5, 110, 238 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 224 |
| BsnI | GGCC | 3 cut(s) | 5, 110, 238 |
| Bsp1286I | GDGCHC | 1 cut(s) | 211 |
| Bsp143I | GATC | 3 cut(s) | 27, 60, 180 |
| BspACI | CCGC | 5 cut(s) | 6, 111, 185, 261, 337 |
| BspANI | GGCC | 3 cut(s) | 5, 110, 238 |
| BspCNI | CTCAG | 3 cut(s) | 94, 114, 134 |
| BspFNI | CGCG | 2 cut(s) | 70, 72 |
| BspLI | GGNNCC | 4 cut(s) | 210, 280, 307, 335 |
| BspMAI | CTGCAG | 1 cut(s) | 244 |
| BspMI | ACCTGC | 1 cut(s) | 254 |
| BspPI | GGATC | 3 cut(s) | 35, 55, 175 |
| BsrBI | CCGCTC | 1 cut(s) | 113 |
| BsrI | ACTGG | 2 cut(s) | 209, 229 |
| BssECI | CCNNGG | 1 cut(s) | 309 |
| BssHII | GCGCGC | 1 cut(s) | 68 |
| BssMI | GATC | 3 cut(s) | 27, 60, 180 |
| BstC8I | GCNNGC | 3 cut(s) | 70, 240, 288 |
| BstDEI | CTNAG | 4 cut(s) | 37, 81, 101, 121 |
| BstFNI | CGCG | 2 cut(s) | 70, 72 |
| BstHHI | GCGC | 2 cut(s) | 70, 72 |
| BstKTI | GATC | 3 cut(s) | 30, 63, 183 |
| BstMBI | GATC | 3 cut(s) | 27, 60, 180 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 116, 345 |
| BstSFI | CTRYAG | 1 cut(s) | 240 |
| BstUI | CGCG | 2 cut(s) | 70, 72 |
| BstV1I | GCAGC | 1 cut(s) | 254 |
| BstX2I | RGATCY | 1 cut(s) | 60 |
| BstYI | RGATCY | 1 cut(s) | 60 |
| BsuRI | GGCC | 3 cut(s) | 5, 110, 238 |
| BveI | ACCTGC | 1 cut(s) | 254 |
| Cac8I | GCNNGC | 3 cut(s) | 70, 240, 288 |
| CfoI | GCGC | 2 cut(s) | 70, 72 |
| Cfr13I | GGNCC | 2 cut(s) | 108, 236 |
| Csp6I | GTAC | 1 cut(s) | 202 |
| CviQI | GTAC | 1 cut(s) | 202 |
| DdeI | CTNAG | 4 cut(s) | 37, 81, 101, 121 |
| DpnI | GATC | 3 cut(s) | 29, 62, 182 |
| DpnII | GATC | 3 cut(s) | 27, 60, 180 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| EciI | GGCGGA | 1 cut(s) | 326 |
| Eco24I | GRGCYC | 1 cut(s) | 211 |
| EcoT38I | GRGCYC | 1 cut(s) | 211 |
| FaiI | YATR | 2 cut(s) | 252, 258 |
| FauI | CCCGC | 1 cut(s) | 192 |
| FblI | GTMKAC | 1 cut(s) | 126 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 111, 243 |
| FriOI | GRGCYC | 1 cut(s) | 211 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 111, 243 |
| GlaI | GCGC | 2 cut(s) | 69, 71 |
| GluI | GCNGC | 3 cut(s) | 6, 111, 243 |
| GsaI | CCCAGC | 1 cut(s) | 162 |
| GsuI | CTGGAG | 1 cut(s) | 338 |
| HaeIII | GGCC | 3 cut(s) | 5, 110, 238 |
| HhaI | GCGC | 2 cut(s) | 70, 72 |
| Hin6I | GCGC | 2 cut(s) | 68, 70 |
| HinP1I | GCGC | 2 cut(s) | 68, 70 |
| HincII | GTYRAC | 2 cut(s) | 55, 155 |
| HindII | GTYRAC | 2 cut(s) | 55, 155 |
| HinfI | GANTC | 3 cut(s) | 48, 74, 151 |
| HphI | GGTGA | 1 cut(s) | 362 |
| Hpy166II | GTNNAC | 3 cut(s) | 55, 127, 155 |
| Hpy188I | TCNGA | 1 cut(s) | 65 |
| Hpy188III | TCNNGA | 2 cut(s) | 31, 103 |
| Hpy8I | GTNNAC | 3 cut(s) | 55, 127, 155 |
| HpyAV | CCTTC | 1 cut(s) | 319 |
| HpyCH4V | TGCA | 1 cut(s) | 242 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 116, 345 |
| HpyF3I | CTNAG | 4 cut(s) | 37, 81, 101, 121 |
| HspAI | GCGC | 2 cut(s) | 68, 70 |
| Kzo9I | GATC | 3 cut(s) | 27, 60, 180 |
| LmnI | GCTCC | 4 cut(s) | 214, 284, 305, 319 |
| Lsp1109I | GCAGC | 1 cut(s) | 254 |
| LweI | GCATC | 1 cut(s) | 357 |
| MalI | GATC | 3 cut(s) | 29, 62, 182 |
| MbiI | CCGCTC | 1 cut(s) | 113 |
| MboI | GATC | 3 cut(s) | 27, 60, 180 |
| MflI | RGATCY | 1 cut(s) | 60 |
| MhlI | GDGCHC | 1 cut(s) | 211 |
| MluCI | AATT | 1 cut(s) | 10 |
| MlyI | GAGTC | 2 cut(s) | 57, 160 |
| MnlI | CCTC | 9 cut(s) | 17, 99, 130, 228, 292, 295, 319, 346, 378 |
| MspA1I | CMGCKG | 1 cut(s) | 245 |
| MvnI | CGCG | 2 cut(s) | 70, 72 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 116, 345 |
| NdeII | GATC | 3 cut(s) | 27, 60, 180 |
| NlaIV | GGNNCC | 4 cut(s) | 210, 280, 307, 335 |
| PaqCI | CACCTGC | 1 cut(s) | 254 |
| PauI | GCGCGC | 1 cut(s) | 68 |
| PfeI | GAWTC | 1 cut(s) | 74 |
| PkrI | GCNGC | 3 cut(s) | 7, 112, 244 |
| PleI | GAGTC | 2 cut(s) | 56, 159 |
| PpsI | GAGTC | 2 cut(s) | 56, 159 |
| PspFI | CCCAGC | 1 cut(s) | 158 |
| PspN4I | GGNNCC | 4 cut(s) | 210, 280, 307, 335 |
| PspPI | GGNCC | 2 cut(s) | 108, 236 |
| PstI | CTGCAG | 1 cut(s) | 244 |
| PsuI | RGATCY | 1 cut(s) | 60 |
| PteI | GCGCGC | 1 cut(s) | 68 |
| PvuII | CAGCTG | 1 cut(s) | 245 |
| RsaI | GTAC | 1 cut(s) | 203 |
| RsaNI | GTAC | 1 cut(s) | 202 |
| SatI | GCNGC | 3 cut(s) | 6, 111, 243 |
| Sau3AI | GATC | 3 cut(s) | 27, 60, 180 |
| Sau96I | GGNCC | 2 cut(s) | 108, 236 |
| ScaI | AGTACT | 1 cut(s) | 203 |
| SchI | GAGTC | 2 cut(s) | 57, 160 |
| SduI | GDGCHC | 1 cut(s) | 211 |
| SetI | ASST | 6 cut(s) | 38, 87, 196, 247, 268, 375 |
| SfaNI | GCATC | 1 cut(s) | 357 |
| SfcI | CTRYAG | 1 cut(s) | 240 |
| Sse9I | AATT | 1 cut(s) | 10 |
| SsiI | CCGC | 5 cut(s) | 6, 111, 185, 261, 337 |
| TaqI | TCGA | 3 cut(s) | 14, 22, 351 |
| TasI | AATT | 1 cut(s) | 10 |
| TatI | WGTACW | 1 cut(s) | 201 |
| TauI | GCSGC | 2 cut(s) | 8, 113 |
| TfiI | GAWTC | 1 cut(s) | 74 |
| TseI | GCWGC | 1 cut(s) | 242 |
| TspDTI | ATGAA | 1 cut(s) | 159 |
| XmiI | GTMKAC | 1 cut(s) | 126 |
| ZrmI | AGTACT | 1 cut(s) | 203 |