Prupe.2G323800_v2.0.a1

Belongs to the gluconokinase GntK GntV family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
29975859 .. 29977594
1736 bp
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UTR
Exon/CDS
Intron
Prupe.2G323800.1

Sequence Viewer

Length: 564 bp
ATGGCTTCAGTTCACGGAGGGATGGCTGTTGTGATTATGGGTGTCAGTGGTGCTGGGAAATCGACGATAGGTGAGATGCTGGCAAAAGAGACAAACTCTAACTTTATAGATGCCGATGATTTCCATCCACAATCAAACAAAGAAAAGATGCGTAAAGGGATCCCCCTTTCAGAGGAAGACCGGATGCCTTGGCTTGAAACACTTCGAAATGCCTTAAGAGAAAAGTTGGTCGATGGAGGAACTGTAATTCTTGGGTGTTCAGCTCTGCAGAAGCGATACAGAGAAGTTCTACGATCCGCCGACCCTAATTATGAACTTGGAAGTCATGTCAGTCTGGTGAAGTTCGTCCTGTTGGATGCACAGGCAGAGGTGCTGGCTGCTAGATTAGAGAAAAGAATCGCAGAAGGGAAGCATTTCATGTCGCCTGCACTTTTGCAGTCTCAGTTAGGCTTGCTTCAGATTGATGATTCTGAAGGGATACTTAAAGTTGATGCCACTTTAAGTCCTCAAGACATAGTAAATACCATTCAAAGATTGATTTTCAGCTTTAGAGTTAAGATTTAA

Protein Analysis

188

Amino Acids

20.6

Weight (kDa)

6.43

Isoelectric Point (pI)

43.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010412)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 297
AclWI GGATC 3 cut(s) 154, 167, 288
AcuI CTGAAG 2 cut(s) 440, 492
AfiI CCNNNNNNNGG 1 cut(s) 172
AflII CTTAAG 1 cut(s) 214
AgsI TTSAA 2 cut(s) 197, 530
AluBI AGCT 2 cut(s) 263, 546
AluI AGCT 2 cut(s) 263, 546
Alw26I GTCTC 2 cut(s) 83, 444
AlwI GGATC 3 cut(s) 154, 167, 288
ApeKI GCWGC 1 cut(s) 377
Asp700I GAANNNNTTC 2 cut(s) 201, 413
AsuHPI GGTGA 2 cut(s) 83, 349
AsuII TTCGAA 1 cut(s) 205
BamHI GGATCC 1 cut(s) 159
BbsI GAAGAC 1 cut(s) 183
BbvI GCAGC 1 cut(s) 364
BccI CCATC 3 cut(s) 16, 132, 227
BciVI GTATCC 1 cut(s) 471
BcoDI GTCTC 2 cut(s) 83, 444
BfaI CTAG 1 cut(s) 381
BfmI CTRYAG 1 cut(s) 266
BfrI CTTAAG 1 cut(s) 214
BfuI GTATCC 1 cut(s) 471
BisI GCNGC 1 cut(s) 378
BlsI GCNGC 1 cut(s) 379
BmiI GGNNCC 1 cut(s) 161
BmsI GCATC 6 cut(s) 66, 100, 138, 174, 346, 481
BpiI GAAGAC 1 cut(s) 183
BplI GAGNNNNNCTC 2 cut(s) 80, 112
Bpu14I TTCGAA 1 cut(s) 205
BpuEI CTTGAG 1 cut(s) 492
BsaBI GATNNNNATC 1 cut(s) 123
BsaJI CCNNGG 1 cut(s) 188
BsaWI WCCGGW 1 cut(s) 180
BsaXI ACNNNNNCTCC 2 cut(s) 228, 258
Bsc4I CCNNNNNNNGG 1 cut(s) 172
Bse8I GATNNNNATC 1 cut(s) 123
BseDI CCNNGG 1 cut(s) 188
BseGI GGATG 4 cut(s) 27, 124, 189, 361
BseJI GATNNNNATC 1 cut(s) 123
BseLI CCNNNNNNNGG 1 cut(s) 172
BseMII CTCAG 1 cut(s) 455
BseXI GCAGC 1 cut(s) 364
BseYI CCCAGC 1 cut(s) 53
BsgI GTGCAG 1 cut(s) 411
BsiSI CCGG 1 cut(s) 181
BslI CCNNNNNNNGG 1 cut(s) 172
BsmAI GTCTC 2 cut(s) 83, 444
Bsp119I TTCGAA 1 cut(s) 205
Bsp143I GATC 2 cut(s) 159, 293
BspACI CCGC 1 cut(s) 297
BspCNI CTCAG 1 cut(s) 454
BspLI GGNNCC 1 cut(s) 161
BspMAI CTGCAG 1 cut(s) 270
BspPI GGATC 3 cut(s) 154, 167, 288
BspT104I TTCGAA 1 cut(s) 205
BspTI CTTAAG 1 cut(s) 214
BssECI CCNNGG 1 cut(s) 188
BssMI GATC 2 cut(s) 159, 293
BssT1I CCWWGG 1 cut(s) 188
Bst4CI ACNGT 1 cut(s) 244
BstAFI CTTAAG 1 cut(s) 214
BstBI TTCGAA 1 cut(s) 205
BstC8I GCNNGC 4 cut(s) 81, 375, 426, 452
BstDEI CTNAG 1 cut(s) 441
BstENI CCTNNNNNAGG 1 cut(s) 170
BstF5I GGATG 4 cut(s) 27, 124, 189, 361
BstKTI GATC 2 cut(s) 162, 296
BstMAI GTCTC 2 cut(s) 83, 444
BstMBI GATC 2 cut(s) 159, 293
BstSFI CTRYAG 1 cut(s) 266
BstV1I GCAGC 1 cut(s) 364
BstV2I GAAGAC 1 cut(s) 183
BstX2I RGATCY 1 cut(s) 159
BstYI RGATCY 1 cut(s) 159
BsuI GTATCC 1 cut(s) 471
BtsCI GGATG 4 cut(s) 27, 124, 189, 361
BtsIMutI CAGTG 1 cut(s) 52
Cac8I GCNNGC 4 cut(s) 81, 375, 426, 452
CviAII CATG 2 cut(s) 326, 418
CviJI RGCY 7 cut(s) 5, 26, 193, 263, 377, 450, 546
CviKI_1 RGCY 7 cut(s) 5, 26, 193, 263, 377, 450, 546
DdeI CTNAG 1 cut(s) 441
DpnI GATC 2 cut(s) 161, 295
DpnII GATC 2 cut(s) 159, 293
EciI GGCGGA 1 cut(s) 286
Eco130I CCWWGG 1 cut(s) 188
Eco57I CTGAAG 2 cut(s) 440, 492
EcoNI CCTNNNNNAGG 1 cut(s) 170
EcoT14I CCWWGG 1 cut(s) 188
ErhI CCWWGG 1 cut(s) 188
FaeI CATG 2 cut(s) 329, 421
FaiI YATR 6 cut(s) 38, 107, 312, 327, 419, 515
FalI AAGNNNNNCTT 2 cut(s) 465, 497
FatI CATG 2 cut(s) 325, 417
Fnu4HI GCNGC 1 cut(s) 378
FokI GGATG 4 cut(s) 34, 111, 196, 368
Fsp4HI GCNGC 1 cut(s) 378
FspBI CTAG 1 cut(s) 381
GluI GCNGC 1 cut(s) 378
GsaI CCCAGC 1 cut(s) 57
HapII CCGG 1 cut(s) 181
Hin1II CATG 2 cut(s) 329, 421
HinfI GANTC 2 cut(s) 396, 467
HpaII CCGG 1 cut(s) 181
HphI GGTGA 2 cut(s) 83, 349
Hpy166II GTNNAC 1 cut(s) 13
Hpy188I TCNGA 3 cut(s) 172, 459, 472
Hpy188III TCNNGA 1 cut(s) 509
Hpy8I GTNNAC 1 cut(s) 13
Hpy99I CGWCG 1 cut(s) 67
HpyAV CCTTC 2 cut(s) 398, 467
HpyCH4III ACNGT 1 cut(s) 244
HpyCH4V TGCA 4 cut(s) 268, 359, 428, 436
HpyF3I CTNAG 1 cut(s) 441
Hsp92II CATG 2 cut(s) 329, 421
Kzo9I GATC 2 cut(s) 159, 293
LpnPI CCDG 8 cut(s) 39, 65, 194, 320, 347, 359, 362, 438
Lsp1109I GCAGC 1 cut(s) 364
LweI GCATC 6 cut(s) 66, 100, 138, 174, 346, 481
MaeI CTAG 1 cut(s) 381
MalI GATC 2 cut(s) 161, 295
MboI GATC 2 cut(s) 159, 293
MboII GAAGA 1 cut(s) 188
MflI RGATCY 1 cut(s) 159
MluCI AATT 2 cut(s) 246, 307
MmeI TCCRAC 1 cut(s) 333
MnlI CCTC 5 cut(s) 11, 166, 230, 361, 516
MroXI GAANNNNTTC 2 cut(s) 201, 413
MseI TTAA 5 cut(s) 215, 483, 500, 555, 562
MspCI CTTAAG 1 cut(s) 214
MspI CCGG 1 cut(s) 181
NdeII GATC 2 cut(s) 159, 293
NlaIII CATG 2 cut(s) 329, 421
NlaIV GGNNCC 1 cut(s) 161
NspV TTCGAA 1 cut(s) 205
PdmI GAANNNNTTC 2 cut(s) 201, 413
PfeI GAWTC 2 cut(s) 396, 467
PkrI GCNGC 1 cut(s) 379
PspFI CCCAGC 1 cut(s) 53
PspN4I GGNNCC 1 cut(s) 161
PstI CTGCAG 1 cut(s) 270
PsuI RGATCY 1 cut(s) 159
SaqAI TTAA 5 cut(s) 215, 483, 500, 555, 562
SatI GCNGC 1 cut(s) 378
Sau3AI GATC 2 cut(s) 159, 293
SetI ASST 4 cut(s) 73, 265, 372, 548
SfaNI GCATC 6 cut(s) 66, 100, 138, 174, 346, 481
SfcI CTRYAG 1 cut(s) 266
SfuI TTCGAA 1 cut(s) 205
SmlI CTYRAG 2 cut(s) 214, 507
SmoI CTYRAG 2 cut(s) 214, 507
Sse9I AATT 2 cut(s) 246, 307
SsiI CCGC 1 cut(s) 297
SspMI CTAG 1 cut(s) 381
StyI CCWWGG 1 cut(s) 188
TaaI ACNGT 1 cut(s) 244
TaqI TCGA 3 cut(s) 62, 205, 231
TasI AATT 2 cut(s) 246, 307
TfiI GAWTC 2 cut(s) 396, 467
Tru1I TTAA 5 cut(s) 215, 483, 500, 555, 562
Tru9I TTAA 5 cut(s) 215, 483, 500, 555, 562
TscAI CASTG 1 cut(s) 52
TseI GCWGC 1 cut(s) 377
TspDTI ATGAA 2 cut(s) 327, 406
TspGWI ACGGA 1 cut(s) 30
TspRI CASTG 1 cut(s) 52
Vha464I CTTAAG 1 cut(s) 214
XagI CCTNNNNNAGG 1 cut(s) 170
XmnI GAANNNNTTC 2 cut(s) 201, 413
XspI CTAG 1 cut(s) 381
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.