Rmu_ssc0000132.1_g000001

Belongs to the gluconokinase GntK GntV family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000132.1
Physical Location & Seq
Forward (+)
110 .. 1299
1190 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000132.1_g000001.1.cds

Sequence Viewer

Length: 441 bp
atgctggccaaagagacaaactgtagctttattgatgctgatgatttccacccacaagcaaacaaagaaaagatgagtaaagggatccctctttcagaggaagatcgaattccttggcttgaaacacttcggaatgccttaagagagaacttggtcagtggaagtactgtacttcttggttgttcagctctgcagaagcggtaccgagacattttaagatctgcagaccctaactatgaacctggaagttatgcctgtctggtgaagttcatcttgttagacactaaggcacatgtgctggctgctcgattagagaagagagtggcagaaggaaagcacttcatgtcacctgaacttttgcagtctcagttagacttgcttcagattgatgattctgaagggatacttaaagttgatgctaacctaactccacaagacata

Protein Analysis

147

Amino Acids

16.51

Weight (kDa)

5.21

Isoelectric Point (pI)

57.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010412)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 201
AccB1I GGYRCC 1 cut(s) 201
AciI CCGC 1 cut(s) 199
AclWI GGATC 2 cut(s) 79, 92
AcoI YGGCCR 1 cut(s) 6
AcsI RAATTY 1 cut(s) 108
AcuI CTGAAG 2 cut(s) 365, 417
AfaI GTAC 3 cut(s) 166, 171, 203
AflII CTTAAG 1 cut(s) 139
AflIII ACRYGT 1 cut(s) 292
AgsI TTSAA 1 cut(s) 122
AjnI CCWGG 1 cut(s) 241
AluBI AGCT 2 cut(s) 27, 188
AluI AGCT 2 cut(s) 27, 188
Alw26I GTCTC 3 cut(s) 8, 201, 369
AlwI GGATC 2 cut(s) 79, 92
AoxI GGCC 1 cut(s) 6
ApeKI GCWGC 1 cut(s) 302
ApoI RAATTY 1 cut(s) 108
Asp700I GAANNNNTTC 1 cut(s) 126
Asp718I GGTACC 1 cut(s) 201
AsuHPI GGTGA 2 cut(s) 274, 339
BalI TGGCCA 1 cut(s) 8
BamHI GGATCC 1 cut(s) 84
BanI GGYRCC 1 cut(s) 201
BbvI GCAGC 1 cut(s) 289
BciT130I CCWGG 1 cut(s) 243
BciVI GTATCC 1 cut(s) 396
BcoDI GTCTC 3 cut(s) 8, 201, 369
BfmI CTRYAG 3 cut(s) 22, 191, 222
BfrI CTTAAG 1 cut(s) 139
BfuI GTATCC 1 cut(s) 396
BglII AGATCT 1 cut(s) 218
BisI GCNGC 1 cut(s) 303
BlsI GCNGC 1 cut(s) 304
BmcAI AGTACT 1 cut(s) 166
Bme1390I CCNGG 1 cut(s) 243
BmiI GGNNCC 2 cut(s) 86, 203
BmrFI CCNGG 1 cut(s) 243
BmsI GCATC 2 cut(s) 25, 406
BsaJI CCNNGG 1 cut(s) 113
BseBI CCWGG 1 cut(s) 243
BseDI CCNNGG 1 cut(s) 113
BseMII CTCAG 1 cut(s) 380
BseXI GCAGC 1 cut(s) 289
BshFI GGCC 1 cut(s) 8
BshNI GGYRCC 1 cut(s) 201
BsmAI GTCTC 3 cut(s) 8, 201, 369
BsmI GAATGC 1 cut(s) 139
BsnI GGCC 1 cut(s) 8
Bsp143I GATC 3 cut(s) 84, 103, 218
BspACI CCGC 1 cut(s) 199
BspANI GGCC 1 cut(s) 8
BspCNI CTCAG 1 cut(s) 379
BspLI GGNNCC 2 cut(s) 86, 203
BspMAI CTGCAG 2 cut(s) 195, 226
BspPI GGATC 2 cut(s) 79, 92
BspT107I GGYRCC 1 cut(s) 201
BspTI CTTAAG 1 cut(s) 139
BssECI CCNNGG 1 cut(s) 113
BssMI GATC 3 cut(s) 84, 103, 218
BssT1I CCWWGG 1 cut(s) 113
Bst2UI CCWGG 1 cut(s) 243
Bst4CI ACNGT 2 cut(s) 23, 169
Bst6I CTCTTC 1 cut(s) 311
BstAFI CTTAAG 1 cut(s) 139
BstC8I GCNNGC 2 cut(s) 6, 300
BstDEI CTNAG 2 cut(s) 285, 366
BstKTI GATC 3 cut(s) 87, 106, 221
BstMAI GTCTC 3 cut(s) 8, 201, 369
BstMBI GATC 3 cut(s) 84, 103, 218
BstNI CCWGG 1 cut(s) 243
BstNSI RCATGY 1 cut(s) 296
BstSCI CCNGG 1 cut(s) 241
BstSFI CTRYAG 3 cut(s) 22, 191, 222
BstV1I GCAGC 1 cut(s) 289
BstX2I RGATCY 2 cut(s) 84, 218
BstYI RGATCY 2 cut(s) 84, 218
BsuI GTATCC 1 cut(s) 396
BsuRI GGCC 1 cut(s) 8
BtsIMutI CAGTG 1 cut(s) 163
Cac8I GCNNGC 2 cut(s) 6, 300
Csp6I GTAC 3 cut(s) 165, 170, 202
CviAII CATG 2 cut(s) 293, 343
CviJI RGCY 5 cut(s) 8, 27, 118, 188, 302
CviKI_1 RGCY 5 cut(s) 8, 27, 118, 188, 302
CviQI GTAC 3 cut(s) 165, 170, 202
DdeI CTNAG 2 cut(s) 285, 366
DpnI GATC 3 cut(s) 86, 105, 220
DpnII GATC 3 cut(s) 84, 103, 218
EaeI YGGCCR 1 cut(s) 6
Eam1104I CTCTTC 1 cut(s) 311
EarI CTCTTC 1 cut(s) 311
Eco130I CCWWGG 1 cut(s) 113
Eco57I CTGAAG 2 cut(s) 365, 417
EcoRI GAATTC 1 cut(s) 108
EcoRII CCWGG 1 cut(s) 241
EcoT14I CCWWGG 1 cut(s) 113
ErhI CCWWGG 1 cut(s) 113
FaeI CATG 2 cut(s) 296, 346
FaiI YATR 5 cut(s) 237, 252, 294, 344, 440
FalI AAGNNNNNCTT 4 cut(s) 257, 289, 390, 422
FatI CATG 2 cut(s) 292, 342
Fnu4HI GCNGC 1 cut(s) 303
Fsp4HI GCNGC 1 cut(s) 303
GluI GCNGC 1 cut(s) 303
HaeIII GGCC 1 cut(s) 8
Hin1II CATG 2 cut(s) 296, 346
HinfI GANTC 1 cut(s) 392
HphI GGTGA 2 cut(s) 274, 339
Hpy188I TCNGA 4 cut(s) 97, 132, 384, 397
HpyAV CCTTC 2 cut(s) 323, 392
HpyCH4III ACNGT 2 cut(s) 23, 169
HpyCH4V TGCA 3 cut(s) 193, 224, 361
HpyF3I CTNAG 2 cut(s) 285, 366
Hsp92II CATG 2 cut(s) 296, 346
KpnI GGTACC 1 cut(s) 205
Kzo9I GATC 3 cut(s) 84, 103, 218
LpnPI CCDG 6 cut(s) 228, 245, 255, 268, 284, 363
Lsp1109I GCAGC 1 cut(s) 289
LweI GCATC 2 cut(s) 25, 406
MaeIII GTNAC 1 cut(s) 345
MalI GATC 3 cut(s) 86, 105, 220
MboI GATC 3 cut(s) 84, 103, 218
MboII GAAGA 2 cut(s) 113, 328
MflI RGATCY 2 cut(s) 84, 218
MlsI TGGCCA 1 cut(s) 8
MluCI AATT 1 cut(s) 108
MluNI TGGCCA 1 cut(s) 8
MnlI CCTC 2 cut(s) 91, 99
Mox20I TGGCCA 1 cut(s) 8
MroXI GAANNNNTTC 1 cut(s) 126
MscI TGGCCA 1 cut(s) 8
MseI TTAA 3 cut(s) 140, 215, 408
Msp20I TGGCCA 1 cut(s) 8
MspCI CTTAAG 1 cut(s) 139
MspR9I CCNGG 1 cut(s) 243
Mva1269I GAATGC 1 cut(s) 139
MvaI CCWGG 1 cut(s) 243
NdeII GATC 3 cut(s) 84, 103, 218
NlaIII CATG 2 cut(s) 296, 346
NlaIV GGNNCC 2 cut(s) 86, 203
NmuCI GTSAC 1 cut(s) 345
NspI RCATGY 1 cut(s) 296
PciI ACATGT 1 cut(s) 292
PctI GAATGC 1 cut(s) 139
PdmI GAANNNNTTC 1 cut(s) 126
PfeI GAWTC 1 cut(s) 392
PkrI GCNGC 1 cut(s) 304
PscI ACATGT 1 cut(s) 292
Psp6I CCWGG 1 cut(s) 241
PspGI CCWGG 1 cut(s) 241
PspN4I GGNNCC 2 cut(s) 86, 203
PstI CTGCAG 2 cut(s) 195, 226
PsuI RGATCY 2 cut(s) 84, 218
RsaI GTAC 3 cut(s) 166, 171, 203
RsaNI GTAC 3 cut(s) 165, 170, 202
SaqAI TTAA 3 cut(s) 140, 215, 408
SatI GCNGC 1 cut(s) 303
Sau3AI GATC 3 cut(s) 84, 103, 218
ScaI AGTACT 1 cut(s) 166
ScrFI CCNGG 1 cut(s) 243
SetI ASST 5 cut(s) 29, 190, 244, 352, 426
SfaNI GCATC 2 cut(s) 25, 406
SfcI CTRYAG 3 cut(s) 22, 191, 222
SmlI CTYRAG 1 cut(s) 139
SmoI CTYRAG 1 cut(s) 139
Sse9I AATT 1 cut(s) 108
SsiI CCGC 1 cut(s) 199
StyD4I CCNGG 1 cut(s) 241
StyI CCWWGG 1 cut(s) 113
TaaI ACNGT 2 cut(s) 23, 169
TaqI TCGA 2 cut(s) 106, 307
TasI AATT 1 cut(s) 108
TatI WGTACW 2 cut(s) 164, 169
TfiI GAWTC 1 cut(s) 392
Tru1I TTAA 3 cut(s) 140, 215, 408
Tru9I TTAA 3 cut(s) 140, 215, 408
TscAI CASTG 1 cut(s) 163
TseFI GTSAC 1 cut(s) 345
TseI GCWGC 1 cut(s) 302
Tsp45I GTSAC 1 cut(s) 345
TspDTI ATGAA 3 cut(s) 252, 259, 331
TspRI CASTG 1 cut(s) 163
Vha464I CTTAAG 1 cut(s) 139
XapI RAATTY 1 cut(s) 108
XceI RCATGY 1 cut(s) 296
XmnI GAANNNNTTC 1 cut(s) 126
ZrmI AGTACT 1 cut(s) 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.