Prupe.3G013800_v2.0.a1

Polyamine oxidase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
991293 .. 997115
5823 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G013800.1

Sequence Viewer

Length: 1494 bp
ATGCCAATCCCAATGGACCCAAAAGATTTTTTCTCTACTGATTTTCTGGAAGGCTCTATTTCGTCTCACATTGAGAGGCAGCACAATGCATGCCCTTCTGTTATTGTCATTGGTGGTGGTATATCAGGGATTGCAGCTGCACGTGTTCTCCATGATGCATCTTTTAAGGTTATCTTGCTGGAATCACGAGACAGACTTGGTGGCCGGATTCATACTGACTACTCATTTGGTTGTCCAGTAGATATGGGAGCATCATGGCTACATGGTGTTTGCAATGAGAATCCCTTGGCTCCACTGATACGCCGTCTAGGACTTACTTTATACCGTACGAGTGGTGACGACTCTGTGTTGTATGACCATGATTTGGAAAGCTATGCACTTTTTGATATGGATGGAAGCCAAGTTCCTCAAGAGATGGTCATTGAAGTTGGTAATACTTTCAAGCAAATTCTCAAAGAGACCGAGAAAGTACGGAATGAGAATACTGATGACATGTCTGTCTCTCAAGCAATTTCTATTGTGATGGATAGGCATCCAGAATTAAGACAAAACGGACTTGCTCACGAAGTGTTACAATGGTACATATGTCGAATGGAAGCGTGGTTCGCTGCAGATGCAGATGTGATATCGCTAAAAAACTGGGATCAGGAGCATGTTCTTTCTGGTGGCCATGGACTTATGGTGCAAGGCTATGACCCAATAATAAGGGCTCTTGCAGAAGATATTGATGTACGCTTGAATCACAGCAGGGTTACAAAGATATTAAATGGGCATAACAAGATGATGGTCACAATTGAAGACGGAAGAAACTTCGTTGCTGATGCAGCTATAATAACAGTACCCCATGGTATTCTTAAAGCCAAGATGATTGAGTTTGAACCAAAGTTGCCTGAGTGGAAGGTTGATGCAATTTCGGATCTTGGGGTGGGCAATGAAAACAAAATTGCCTTGCGATTTGAAAAGGTTTTCTGGCCTAATGTAGAGCTTTTAGGCGTGGTTGCACCAACCTCTTATGCATGTGGTTATTTTCTCAATCTTCACAAGACCACAGGCCATCCGGTCCTTGTCTATATGGCTGCTGGAAGGTTTGCATACGACCTTGAAAAATTAACTGATGATGGTGCAGTTAGTTTTGTTATGTTGCAGCTTAAGAAGATGTTACCTGATGCAACTGATCCAGTTCAATATCTTGTATCACGGTGGGGAACGGACCTGAATTCTCTTGGATGCTACTCGTTGGATTTGGTTGGAAAGCCTGGAGATATATATGATAGGCTTCGAGCACCTTTGGGCAGTCTTTTCTTTGGAGGCGAAGCTGTTAGCATGGACCACCAAGGATCTGTGCATGGAGCTTACTCAGCTGGAGTTATAGCTGCTGAGGATTGTCAGAGACATCTCCTAAATAAATTTGGTAGACTGGAAAAGCTTCAGCATGCTTACATTACGGATGAAGTCCTCGAAGCAACAGTTCCCCTGCAAATCTCAAGGATGTGA

Protein Analysis

498

Amino Acids

55.21

Weight (kDa)

5.31

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011767)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 497
AccB7I CCANNNNNTGG 1 cut(s) 364
AccI GTMKAC 1 cut(s) 1414
AclWI GGATC 4 cut(s) 651, 924, 1169, 1345
AcoI YGGCCR 2 cut(s) 202, 667
AcsI RAATTY 3 cut(s) 447, 1216, 1406
AcuI CTGAAG 1 cut(s) 1412
AcvI CACGTG 1 cut(s) 143
AdeI CACNNNGTG 1 cut(s) 568
AfaI GTAC 5 cut(s) 328, 471, 581, 732, 840
AfiI CCNNNNNNNGG 1 cut(s) 364
AflII CTTAAG 1 cut(s) 1148
AflIII ACRYGT 2 cut(s) 142, 492
AgsI TTSAA 8 cut(s) 425, 442, 739, 797, 878, 959, 1103, 1184
AjnI CCWGG 1 cut(s) 1255
AloI GAACNNNNNNTCC 4 cut(s) 387, 419, 587, 619
Alw21I GWGCWC 1 cut(s) 1285
Alw26I GTCTC 5 cut(s) 69, 183, 452, 505, 1384
AlwI GGATC 4 cut(s) 651, 924, 1169, 1345
AoxI GGCC 4 cut(s) 202, 667, 971, 1051
ApeKI GCWGC 8 cut(s) 79, 134, 137, 608, 824, 1076, 1144, 1373
ApoI RAATTY 3 cut(s) 447, 1216, 1406
ArsI GACNNNNNNTTYG 2 cut(s) 209, 241
Asp700I GAANNNNTTC 1 cut(s) 1425
AspS9I GGNCC 4 cut(s) 16, 1060, 1210, 1327
AsuHPI GGTGA 1 cut(s) 347
AvaII GGWCC 4 cut(s) 16, 1060, 1210, 1327
BaeI ACNNNNGTAYC 2 cut(s) 571, 604
BalI TGGCCA 1 cut(s) 669
BanII GRGCYC 1 cut(s) 712
BauI CACGAG 1 cut(s) 186
BbrPI CACGTG 1 cut(s) 143
BbsI GAAGAC 1 cut(s) 804
Bbv12I GWGCWC 1 cut(s) 1285
BbvCI CCTCAGC 1 cut(s) 1377
BbvI GCAGC 8 cut(s) 91, 124, 146, 595, 836, 1063, 1156, 1360
BccI CCATC 6 cut(s) 386, 409, 517, 778, 1062, 1112
BceAI ACGGC 1 cut(s) 288
BciT130I CCWGG 1 cut(s) 1257
BcoDI GTCTC 5 cut(s) 69, 183, 452, 505, 1384
BfaI CTAG 1 cut(s) 308
BfmI CTRYAG 1 cut(s) 609
BfrI CTTAAG 1 cut(s) 1148
BisI GCNGC 8 cut(s) 80, 135, 138, 609, 825, 1077, 1145, 1374
BlsI GCNGC 8 cut(s) 81, 136, 139, 610, 826, 1078, 1146, 1375
Bme1390I CCNGG 1 cut(s) 1257
Bme18I GGWCC 4 cut(s) 16, 1060, 1210, 1327
BmgT120I GGNCC 4 cut(s) 16, 1060, 1210, 1327
BmiI GGNNCC 2 cut(s) 18, 291
BmrFI CCNGG 1 cut(s) 1257
BmrI ACTGGG 1 cut(s) 649
BmsI GCATC 9 cut(s) 145, 167, 260, 541, 604, 811, 895, 1156, 1217
BmuI ACTGGG 1 cut(s) 649
BpiI GAAGAC 1 cut(s) 804
BpmI CTGGAG 2 cut(s) 1278, 1383
Bpu10I CCTNAGC 1 cut(s) 1377
BpuEI CTTGAG 3 cut(s) 393, 489, 1468
BsaAI YACGTR 1 cut(s) 143
BsaBI GATNNNNATC 1 cut(s) 531
BsaI GGTCTC 1 cut(s) 452
BsaJI CCNNGG 4 cut(s) 285, 670, 844, 1333
BsaWI WCCGGW 1 cut(s) 1057
BsaXI ACNNNNNCTCC 2 cut(s) 132, 162
Bsc4I CCNNNNNNNGG 1 cut(s) 364
Bse1I ACTGG 4 cut(s) 236, 644, 1178, 1422
Bse3DI GCAATG 2 cut(s) 280, 937
Bse8I GATNNNNATC 1 cut(s) 531
BseBI CCWGG 1 cut(s) 1257
BseDI CCNNGG 4 cut(s) 285, 670, 844, 1333
BseGI GGATG 6 cut(s) 397, 532, 1054, 1232, 1453, 1494
BseJI GATNNNNATC 1 cut(s) 531
BseLI CCNNNNNNNGG 1 cut(s) 364
BseMI GCAATG 2 cut(s) 280, 937
BseMII CTCAG 3 cut(s) 882, 1368, 1371
BseNI ACTGG 4 cut(s) 236, 644, 1178, 1422
BseXI GCAGC 8 cut(s) 91, 124, 146, 595, 836, 1063, 1156, 1360
BsgI GTGCAG 2 cut(s) 123, 1143
BshFI GGCC 4 cut(s) 204, 669, 973, 1053
BsiHKAI GWGCWC 1 cut(s) 1285
BsiSI CCGG 2 cut(s) 205, 1058
BsiWI CGTACG 1 cut(s) 326
BslI CCNNNNNNNGG 1 cut(s) 364
BsmAI GTCTC 5 cut(s) 69, 183, 452, 505, 1384
BsmBI CGTCTC 1 cut(s) 69
BsnI GGCC 4 cut(s) 204, 669, 973, 1053
Bso31I GGTCTC 1 cut(s) 452
Bsp1286I GDGCHC 2 cut(s) 712, 1285
Bsp143I GATC 4 cut(s) 643, 916, 1174, 1337
Bsp19I CCATGG 2 cut(s) 670, 844
BspANI GGCC 4 cut(s) 204, 669, 973, 1053
BspCNI CTCAG 3 cut(s) 883, 1369, 1370
BspLI GGNNCC 2 cut(s) 18, 291
BspMAI CTGCAG 1 cut(s) 613
BspPI GGATC 4 cut(s) 651, 924, 1169, 1345
BspTI CTTAAG 1 cut(s) 1148
BspTNI GGTCTC 1 cut(s) 452
BsrDI GCAATG 2 cut(s) 280, 937
BsrI ACTGG 4 cut(s) 236, 644, 1178, 1422
BssECI CCNNGG 4 cut(s) 285, 670, 844, 1333
BssMI GATC 4 cut(s) 643, 916, 1174, 1337
BssSI CACGAG 1 cut(s) 186
BssT1I CCWWGG 4 cut(s) 285, 670, 844, 1333
Bst2BI CACGAG 1 cut(s) 186
Bst2UI CCWGG 1 cut(s) 1257
Bst4CI ACNGT 4 cut(s) 326, 838, 1200, 1468
BstAFI CTTAAG 1 cut(s) 1148
BstBAI YACGTR 1 cut(s) 143
BstC8I GCNNGC 2 cut(s) 91, 1434
BstDEI CTNAG 3 cut(s) 891, 1357, 1377
BstDSI CCRYGG 2 cut(s) 670, 844
BstF5I GGATG 6 cut(s) 397, 532, 1054, 1232, 1453, 1494
BstKTI GATC 4 cut(s) 646, 919, 1177, 1340
BstMAI GTCTC 5 cut(s) 69, 183, 452, 505, 1384
BstMBI GATC 4 cut(s) 643, 916, 1174, 1337
BstMWI GCNNNNNNNGC 4 cut(s) 605, 614, 824, 1358
BstNI CCWGG 1 cut(s) 1257
BstNSI RCATGY 5 cut(s) 93, 496, 656, 1020, 1436
BstSCI CCNGG 1 cut(s) 1255
BstSFI CTRYAG 1 cut(s) 609
BstV1I GCAGC 8 cut(s) 91, 124, 146, 595, 836, 1063, 1156, 1360
BstV2I GAAGAC 1 cut(s) 804
BstX2I RGATCY 2 cut(s) 916, 1337
BstYI RGATCY 2 cut(s) 916, 1337
BsuRI GGCC 4 cut(s) 204, 669, 973, 1053
BtgI CCRYGG 2 cut(s) 670, 844
BtsCI GGATG 6 cut(s) 397, 532, 1054, 1232, 1453, 1494
BtsIMutI CAGTG 1 cut(s) 293
Cac8I GCNNGC 2 cut(s) 91, 1434
Cfr13I GGNCC 4 cut(s) 16, 1060, 1210, 1327
Csp6I GTAC 5 cut(s) 327, 470, 580, 731, 839
CviQI GTAC 5 cut(s) 327, 470, 580, 731, 839
DdeI CTNAG 3 cut(s) 891, 1357, 1377
DpnI GATC 4 cut(s) 645, 918, 1176, 1339
DpnII GATC 4 cut(s) 643, 916, 1174, 1337
DraIII CACNNNGTG 1 cut(s) 568
DrdI GACNNNNNNGTC 1 cut(s) 497
DseDI GACNNNNNNGTC 1 cut(s) 497
EaeI YGGCCR 2 cut(s) 202, 667
Eco130I CCWWGG 4 cut(s) 285, 670, 844, 1333
Eco24I GRGCYC 1 cut(s) 712
Eco31I GGTCTC 1 cut(s) 452
Eco32I GATATC 1 cut(s) 627
Eco47I GGWCC 4 cut(s) 16, 1060, 1210, 1327
Eco57I CTGAAG 1 cut(s) 1412
Eco72I CACGTG 1 cut(s) 143
EcoRI GAATTC 1 cut(s) 1216
EcoRII CCWGG 1 cut(s) 1255
EcoRV GATATC 1 cut(s) 627
EcoT14I CCWWGG 4 cut(s) 285, 670, 844, 1333
EcoT22I ATGCAT 3 cut(s) 91, 160, 1018
EcoT38I GRGCYC 1 cut(s) 712
ErhI CCWWGG 4 cut(s) 285, 670, 844, 1333
Esp3I CGTCTC 1 cut(s) 69
FalI AAGNNNNNCTT 2 cut(s) 158, 190
FauNDI CATATG 1 cut(s) 584
FblI GTMKAC 1 cut(s) 1414
Fnu4HI GCNGC 8 cut(s) 80, 135, 138, 609, 825, 1077, 1145, 1374
FokI GGATG 5 cut(s) 404, 519, 1041, 1239, 1460
FriOI GRGCYC 1 cut(s) 712
Fsp4HI GCNGC 8 cut(s) 80, 135, 138, 609, 825, 1077, 1145, 1374
FspBI CTAG 1 cut(s) 308
GluI GCNGC 8 cut(s) 80, 135, 138, 609, 825, 1077, 1145, 1374
GsuI CTGGAG 2 cut(s) 1278, 1383
HaeIII GGCC 4 cut(s) 204, 669, 973, 1053
HapII CCGG 2 cut(s) 205, 1058
HindIII AAGCTT 1 cut(s) 1424
HinfI GANTC 5 cut(s) 182, 208, 280, 341, 739
HpaII CCGG 2 cut(s) 205, 1058
HphI GGTGA 1 cut(s) 347
Hpy166II GTNNAC 1 cut(s) 1415
Hpy188I TCNGA 2 cut(s) 916, 1389
Hpy188III TCNNGA 6 cut(s) 47, 186, 410, 536, 563, 647
Hpy8I GTNNAC 1 cut(s) 1415
HpyAV CCTTC 4 cut(s) 44, 105, 892, 1077
HpyCH4III ACNGT 4 cut(s) 326, 838, 1200, 1468
HpyCH4IV ACGT 1 cut(s) 142
HpyF10VI GCNNNNNNNGC 4 cut(s) 605, 614, 824, 1358
HpyF3I CTNAG 3 cut(s) 891, 1357, 1377
HpySE526I ACGT 1 cut(s) 142
Kzo9I GATC 4 cut(s) 643, 916, 1174, 1337
LmnI GCTCC 4 cut(s) 248, 295, 649, 1349
Lsp1109I GCAGC 8 cut(s) 91, 124, 146, 595, 836, 1063, 1156, 1360
LweI GCATC 9 cut(s) 145, 167, 260, 541, 604, 811, 895, 1156, 1217
MaeI CTAG 1 cut(s) 308
MaeII ACGT 1 cut(s) 142
MaeIII GTNAC 5 cut(s) 335, 570, 751, 787, 1158
MalI GATC 4 cut(s) 645, 918, 1176, 1339
MboI GATC 4 cut(s) 643, 916, 1174, 1337
MboII GAAGA 5 cut(s) 731, 809, 816, 1028, 1165
MfeI CAATTG 1 cut(s) 792
MflI RGATCY 2 cut(s) 916, 1337
MhlI GDGCHC 2 cut(s) 712, 1285
MlsI TGGCCA 1 cut(s) 669
MluCI AATT 9 cut(s) 447, 510, 539, 792, 909, 942, 1106, 1216, 1406
MluNI TGGCCA 1 cut(s) 669
MlyI GAGTC 1 cut(s) 335
MmeI TCCRAC 2 cut(s) 1218, 1228
MnlI CCTC 6 cut(s) 69, 417, 1018, 1301, 1372, 1466
Mox20I TGGCCA 1 cut(s) 669
Mph1103I ATGCAT 3 cut(s) 91, 160, 1018
MroXI GAANNNNTTC 1 cut(s) 1425
MscI TGGCCA 1 cut(s) 669
MseI TTAA 6 cut(s) 165, 542, 764, 855, 1109, 1149
Msp20I TGGCCA 1 cut(s) 669
MspA1I CMGCKG 2 cut(s) 137, 1361
MspCI CTTAAG 1 cut(s) 1148
MspI CCGG 2 cut(s) 205, 1058
MspR9I CCNGG 1 cut(s) 1257
MunI CAATTG 1 cut(s) 792
MvaI CCWGG 1 cut(s) 1257
MwoI GCNNNNNNNGC 4 cut(s) 605, 614, 824, 1358
NcoI CCATGG 2 cut(s) 670, 844
NdeI CATATG 1 cut(s) 584
NdeII GATC 4 cut(s) 643, 916, 1174, 1337
NlaIV GGNNCC 2 cut(s) 18, 291
NmuCI GTSAC 2 cut(s) 335, 787
NsiI ATGCAT 3 cut(s) 91, 160, 1018
NspI RCATGY 5 cut(s) 93, 496, 656, 1020, 1436
PaeI GCATGC 2 cut(s) 93, 1436
PciI ACATGT 1 cut(s) 492
PdmI GAANNNNTTC 1 cut(s) 1425
PfeI GAWTC 4 cut(s) 182, 208, 280, 739
Pfl23II CGTACG 1 cut(s) 326
PflMI CCANNNNNTGG 1 cut(s) 364
PkrI GCNGC 8 cut(s) 81, 136, 139, 610, 826, 1078, 1146, 1375
PleI GAGTC 1 cut(s) 335
PmaCI CACGTG 1 cut(s) 143
PmlI CACGTG 1 cut(s) 143
PpsI GAGTC 1 cut(s) 335
Ppu21I YACGTR 1 cut(s) 143
PscI ACATGT 1 cut(s) 492
Psp6I CCWGG 1 cut(s) 1255
PspCI CACGTG 1 cut(s) 143
PspGI CCWGG 1 cut(s) 1255
PspLI CGTACG 1 cut(s) 326
PspN4I GGNNCC 2 cut(s) 18, 291
PspPI GGNCC 4 cut(s) 16, 1060, 1210, 1327
PstI CTGCAG 1 cut(s) 613
PsuI RGATCY 2 cut(s) 916, 1337
PvuII CAGCTG 2 cut(s) 137, 1361
RsaI GTAC 5 cut(s) 328, 471, 581, 732, 840
RsaNI GTAC 5 cut(s) 327, 470, 580, 731, 839
SaqAI TTAA 6 cut(s) 165, 542, 764, 855, 1109, 1149
SatI GCNGC 8 cut(s) 80, 135, 138, 609, 825, 1077, 1145, 1374
Sau3AI GATC 4 cut(s) 643, 916, 1174, 1337
Sau96I GGNCC 4 cut(s) 16, 1060, 1210, 1327
SchI GAGTC 1 cut(s) 335
ScrFI CCNGG 1 cut(s) 1257
SduI GDGCHC 2 cut(s) 712, 1285
SfaNI GCATC 9 cut(s) 145, 167, 260, 541, 604, 811, 895, 1156, 1217
SfcI CTRYAG 1 cut(s) 609
SinI GGWCC 4 cut(s) 16, 1060, 1210, 1327
SmlI CTYRAG 4 cut(s) 408, 504, 1148, 1483
SmoI CTYRAG 4 cut(s) 408, 504, 1148, 1483
SphI GCATGC 2 cut(s) 93, 1436
Sse9I AATT 9 cut(s) 447, 510, 539, 792, 909, 942, 1106, 1216, 1406
SspMI CTAG 1 cut(s) 308
StyD4I CCNGG 1 cut(s) 1255
StyI CCWWGG 4 cut(s) 285, 670, 844, 1333
TaaI ACNGT 4 cut(s) 326, 838, 1200, 1468
TaiI ACGT 1 cut(s) 145
TaqI TCGA 3 cut(s) 589, 1279, 1458
TaqII GACCGA 1 cut(s) 476
TasI AATT 9 cut(s) 447, 510, 539, 792, 909, 942, 1106, 1216, 1406
TfiI GAWTC 4 cut(s) 182, 208, 280, 739
Tru1I TTAA 6 cut(s) 165, 542, 764, 855, 1109, 1149
Tru9I TTAA 6 cut(s) 165, 542, 764, 855, 1109, 1149
TscAI CASTG 1 cut(s) 300
TseFI GTSAC 2 cut(s) 335, 787
TseI GCWGC 8 cut(s) 79, 134, 137, 608, 824, 1076, 1144, 1373
Tsp45I GTSAC 2 cut(s) 335, 787
TspDTI ATGAA 3 cut(s) 200, 948, 1464
TspGWI ACGGA 5 cut(s) 487, 567, 816, 1223, 1460
TspRI CASTG 1 cut(s) 300
Van91I CCANNNNNTGG 1 cut(s) 364
Vha464I CTTAAG 1 cut(s) 1148
VpaK11BI GGWCC 4 cut(s) 16, 1060, 1210, 1327
XapI RAATTY 3 cut(s) 447, 1216, 1406
XceI RCATGY 5 cut(s) 93, 496, 656, 1020, 1436
XmiI GTMKAC 1 cut(s) 1414
XmnI GAANNNNTTC 1 cut(s) 1425
XspI CTAG 1 cut(s) 308
Zsp2I ATGCAT 3 cut(s) 91, 160, 1018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.