Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0015584

Physical Location & Seq

Genomic Coordinates Reverse (-)

1034166 .. 1035685

Gene Structure 1520 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G014500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 657 bp

ATGTCTGATGTTATTCTTTTGGACTGTTGGGCGAGTCCCTTCTGCATGAGGGTGAAGATTGCCCTGGAGGAAAAGGGCATCAAGTATGAAAACAGAGCTGAGGATCTCTTTGGAGGCAAGAGTGAACTGCTGCTCACGTCGAACCCAATTTACGGGAAGGTGCCGGTGCTGCTTCACAATGGAAAACCATTGTGTGAGTCGAGCATCATCGTTGGCTACATTGATGAGACCTGGGCTTCACCACCACTACTCCCATCTTGCCCTTATGGTCGGGCTCAAGCCAAGTTCTGGGCTGACTTCATTGACAAAAAGTTGTTCGATGCGGGCGGCAACATATGGAAAACCAAAGGAGAAGCACAAGCGGTGGCTGTAAAAGACTTCATAGAGATCTTAAAGCAGCTGGAGGGTGGTCTGGGAGACAAGGATTACTTCGGTGGCGATAGCTTTGGTTTTGTGGACATCATAGCGATTGCTATAATCAGCTGGTTTAATGCATTCGAAAGGTTTGGCAACTTCAAGGTTGAAGACCACACCCCAAAGTTTTCAGCTTGGATTAAGAGGTGTTTGCAGAGAGAGACAGTAGCCAAAATCATTCCAGACCCAGAAAAGGTGTATGAATTTGTCCTCCTTCTCAAAAAGATGAACGGTATTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_C_2 GST_N

Protein Analysis

219

Amino Acids

24.53

Weight (kDa)

5.59

Isoelectric Point (pI)

32.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015584)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g37420
malus_domestica	MD09G1279700.v1.1 MD17G1271700.v1.1 MD17G1286500.v1.1
prunus_persica	Prupe.3G014500_v2.0.a1
pyrus_communis	pycom17g26990
rosa_chinensis	RchiOBHm_Chr5g0067311
rosa_laevigata	RLG00000035926
rosa_multiflora	Rmu_sc0000015.1_g000002
rosa_roxburghii	Rroxscaffold_1G00013760
rosa_rugosa	Rorug05G0384100
rosa_samantha	Rh5AG443500 Rh5BG460500 Rh5CG482800 Rh5DG475600
rosa_wichuraiana	Rw5G041420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	160
AccB7I	CCANNNNNTGG	1 cut(s)	288
AciI	CCGC	3 cut(s)	323, 327, 362
AclWI	GGATC	1 cut(s)	111
AcsI	RAATTY	1 cut(s)	617
AfiI	CCNNNNNNNGG	3 cut(s)	152, 288, 607
AgsI	TTSAA	3 cut(s)	517, 524, 653
AjiI	CACGTC	1 cut(s)	138
AjnI	CCWGG	2 cut(s)	63, 230
AluBI	AGCT	5 cut(s)	98, 400, 444, 483, 548
AluI	AGCT	5 cut(s)	98, 400, 444, 483, 548
Alw26I	GTCTC	3 cut(s)	221, 411, 569
AlwI	GGATC	1 cut(s)	111
ApeKI	GCWGC	3 cut(s)	130, 169, 397
ApoI	RAATTY	1 cut(s)	617
AsuHPI	GGTGA	2 cut(s)	64, 231
AsuII	TTCGAA	1 cut(s)	498
BanI	GGYRCC	1 cut(s)	160
BanII	GRGCYC	1 cut(s)	277
BbsI	GAAGAC	1 cut(s)	531
BbvCI	CCTCAGC	1 cut(s)	99
BbvI	GCAGC	3 cut(s)	117, 156, 409
BccI	CCATC	1 cut(s)	262
BciT130I	CCWGG	2 cut(s)	65, 232
BcoDI	GTCTC	3 cut(s)	221, 411, 569
BglII	AGATCT	1 cut(s)	387
BisI	GCNGC	4 cut(s)	131, 170, 328, 398
BlsI	GCNGC	4 cut(s)	132, 171, 329, 399
Bme1390I	CCNGG	2 cut(s)	65, 232
BmgBI	CACGTC	1 cut(s)	138
BmiI	GGNNCC	1 cut(s)	162
BmrFI	CCNGG	2 cut(s)	65, 232
BmsI	GCATC	3 cut(s)	87, 213, 310
BpiI	GAAGAC	1 cut(s)	531
BpmI	CTGGAG	2 cut(s)	86, 422
Bpu10I	CCTNAGC	1 cut(s)	99
Bpu14I	TTCGAA	1 cut(s)	498
BpuEI	CTTGAG	1 cut(s)	261
BsaI	GGTCTC	1 cut(s)	221
BsaJI	CCNNGG	2 cut(s)	63, 231
BsaXI	ACNNNNNCTCC	2 cut(s)	234, 264
Bsc4I	CCNNNNNNNGG	3 cut(s)	152, 288, 607
Bse118I	RCCGGY	1 cut(s)	163
BseBI	CCWGG	2 cut(s)	65, 232
BseDI	CCNNGG	2 cut(s)	63, 231
BseLI	CCNNNNNNNGG	3 cut(s)	152, 288, 607
BseMII	CTCAG	1 cut(s)	90
BseXI	GCAGC	3 cut(s)	117, 156, 409
BshNI	GGYRCC	1 cut(s)	160
BsiSI	CCGG	1 cut(s)	164
BslFI	GGGAC	1 cut(s)	21
BslI	CCNNNNNNNGG	3 cut(s)	152, 288, 607
BsmAI	GTCTC	3 cut(s)	221, 411, 569
BsmFI	GGGAC	1 cut(s)	21
BsmI	GAATGC	1 cut(s)	494
Bso31I	GGTCTC	1 cut(s)	221
Bsp119I	TTCGAA	1 cut(s)	498
Bsp1286I	GDGCHC	1 cut(s)	277
Bsp143I	GATC	2 cut(s)	103, 387
BspACI	CCGC	3 cut(s)	323, 327, 362
BspCNI	CTCAG	1 cut(s)	91
BspLI	GGNNCC	1 cut(s)	162
BspPI	GGATC	1 cut(s)	111
BspT104I	TTCGAA	1 cut(s)	498
BspT107I	GGYRCC	1 cut(s)	160
BspTNI	GGTCTC	1 cut(s)	221
BsrFI	RCCGGY	1 cut(s)	163
BssAI	RCCGGY	1 cut(s)	163
BssECI	CCNNGG	2 cut(s)	63, 231
BssMI	GATC	2 cut(s)	103, 387
Bst2UI	CCWGG	2 cut(s)	65, 232
Bst4CI	ACNGT	3 cut(s)	26, 580, 647
BstBI	TTCGAA	1 cut(s)	498
BstC8I	GCNNGC	1 cut(s)	325
BstDEI	CTNAG	1 cut(s)	99
BstKTI	GATC	2 cut(s)	106, 390
BstMAI	GTCTC	3 cut(s)	221, 411, 569
BstMBI	GATC	2 cut(s)	103, 387
BstMWI	GCNNNNNNNGC	1 cut(s)	169
BstNI	CCWGG	2 cut(s)	65, 232
BstSCI	CCNGG	2 cut(s)	63, 230
BstV1I	GCAGC	3 cut(s)	117, 156, 409
BstV2I	GAAGAC	1 cut(s)	531
BstX2I	RGATCY	2 cut(s)	103, 387
BstYI	RGATCY	2 cut(s)	103, 387
BtrI	CACGTC	1 cut(s)	138
Cac8I	GCNNGC	1 cut(s)	325
Cfr10I	RCCGGY	1 cut(s)	163
CviAII	CATG	1 cut(s)	46
DdeI	CTNAG	1 cut(s)	99
DpnI	GATC	2 cut(s)	105, 389
DpnII	GATC	2 cut(s)	103, 387
Eco24I	GRGCYC	1 cut(s)	277
Eco31I	GGTCTC	1 cut(s)	221
EcoRII	CCWGG	2 cut(s)	63, 230
EcoT22I	ATGCAT	1 cut(s)	496
EcoT38I	GRGCYC	1 cut(s)	277
FaeI	CATG	1 cut(s)	49
FaiI	YATR	9 cut(s)	47, 87, 267, 335, 337, 383, 464, 476, 615
FalI	AAGNNNNNCTT	2 cut(s)	413, 445
FaqI	GGGAC	1 cut(s)	21
FatI	CATG	1 cut(s)	45
FauI	CCCGC	1 cut(s)	316
FauNDI	CATATG	1 cut(s)	335
Fnu4HI	GCNGC	4 cut(s)	131, 170, 328, 398
FriOI	GRGCYC	1 cut(s)	277
Fsp4HI	GCNGC	4 cut(s)	131, 170, 328, 398
GluI	GCNGC	4 cut(s)	131, 170, 328, 398
GsuI	CTGGAG	2 cut(s)	86, 422
HapII	CCGG	1 cut(s)	164
Hin1II	CATG	1 cut(s)	49
HinfI	GANTC	2 cut(s)	34, 197
HpaII	CCGG	1 cut(s)	164
HphI	GGTGA	2 cut(s)	64, 231
Hpy166II	GTNNAC	2 cut(s)	125, 457
Hpy188I	TCNGA	1 cut(s)	7
Hpy188III	TCNNGA	1 cut(s)	596
Hpy8I	GTNNAC	2 cut(s)	125, 457
Hpy99I	CGWCG	1 cut(s)	142
HpyAV	CCTTC	3 cut(s)	49, 151, 638
HpyCH4III	ACNGT	3 cut(s)	26, 580, 647
HpyCH4IV	ACGT	1 cut(s)	137
HpyCH4V	TGCA	3 cut(s)	45, 494, 568
HpyF10VI	GCNNNNNNNGC	1 cut(s)	169
HpyF3I	CTNAG	1 cut(s)	99
HpySE526I	ACGT	1 cut(s)	137
Hsp92II	CATG	1 cut(s)	49
Kzo9I	GATC	2 cut(s)	103, 387
Lsp1109I	GCAGC	3 cut(s)	117, 156, 409
LweI	GCATC	3 cut(s)	87, 213, 310
MaeII	ACGT	1 cut(s)	137
MalI	GATC	2 cut(s)	105, 389
MboI	GATC	2 cut(s)	103, 387
MboII	GAAGA	2 cut(s)	67, 536
MflI	RGATCY	2 cut(s)	103, 387
MhlI	GDGCHC	1 cut(s)	277
MluCI	AATT	2 cut(s)	147, 617
MlyI	GAGTC	2 cut(s)	43, 206
MnlI	CCTC	7 cut(s)	42, 61, 94, 107, 397, 552, 635
Mph1103I	ATGCAT	1 cut(s)	496
MseI	TTAA	3 cut(s)	392, 489, 555
MslI	CAYNNNNRTG	1 cut(s)	50
MspA1I	CMGCKG	2 cut(s)	400, 483
MspI	CCGG	1 cut(s)	164
MspR9I	CCNGG	2 cut(s)	65, 232
Mva1269I	GAATGC	1 cut(s)	494
MvaI	CCWGG	2 cut(s)	65, 232
MwoI	GCNNNNNNNGC	1 cut(s)	169
NdeI	CATATG	1 cut(s)	335
NdeII	GATC	2 cut(s)	103, 387
NlaIII	CATG	1 cut(s)	49
NlaIV	GGNNCC	1 cut(s)	162
NsiI	ATGCAT	1 cut(s)	496
NspV	TTCGAA	1 cut(s)	498
PctI	GAATGC	1 cut(s)	494
PflMI	CCANNNNNTGG	1 cut(s)	288
PkrI	GCNGC	4 cut(s)	132, 171, 329, 399
PleI	GAGTC	2 cut(s)	42, 205
PpsI	GAGTC	2 cut(s)	42, 205
Psp6I	CCWGG	2 cut(s)	63, 230
PspGI	CCWGG	2 cut(s)	63, 230
PspN4I	GGNNCC	1 cut(s)	162
PsrI	GAACNNNNNNTAC	2 cut(s)	134, 166
PsuI	RGATCY	2 cut(s)	103, 387
PvuII	CAGCTG	2 cut(s)	400, 483
RseI	CAYNNNNRTG	1 cut(s)	50
SaqAI	TTAA	3 cut(s)	392, 489, 555
SatI	GCNGC	4 cut(s)	131, 170, 328, 398
Sau3AI	GATC	2 cut(s)	103, 387
SchI	GAGTC	2 cut(s)	43, 206
ScrFI	CCNGG	2 cut(s)	65, 232
SduI	GDGCHC	1 cut(s)	277
SfaNI	GCATC	3 cut(s)	87, 213, 310
SfuI	TTCGAA	1 cut(s)	498
SmiMI	CAYNNNNRTG	1 cut(s)	50
SmlI	CTYRAG	1 cut(s)	276
SmoI	CTYRAG	1 cut(s)	276
Sse9I	AATT	2 cut(s)	147, 617
SsiI	CCGC	3 cut(s)	323, 327, 362
StyD4I	CCNGG	2 cut(s)	63, 230
TaaI	ACNGT	3 cut(s)	26, 580, 647
TaiI	ACGT	1 cut(s)	140
TaqI	TCGA	4 cut(s)	140, 200, 318, 498
TasI	AATT	2 cut(s)	147, 617
TauI	GCSGC	1 cut(s)	330
Tru1I	TTAA	3 cut(s)	392, 489, 555
Tru9I	TTAA	3 cut(s)	392, 489, 555
TseI	GCWGC	3 cut(s)	130, 169, 397
TspDTI	ATGAA	5 cut(s)	102, 289, 370, 630, 656
Van91I	CCANNNNNTGG	1 cut(s)	288
XapI	RAATTY	1 cut(s)	617
Zsp2I	ATGCAT	1 cut(s)	496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.