Nudix hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g30240 |
| malus_domestica | MD09G1270800.v1.1 MD17G1269000.v1.1 |
| prunus_persica | Prupe.3G017600_v2.0.a1 |
| pyrus_communis | pycom09g18190 pycom17g26770 |
| rosa_chinensis | RchiOBHm_Chr3g0491151 |
| rosa_laevigata | RLG00000022859 |
| rosa_multiflora | Rmu_sc0010935.1_g000001 Rmu_sc0016107.1_g000002 Rmu_sc0024833.1_g000004 |
| rosa_roxburghii | Rroxscaffold_6G00393120 |
| rosa_rugosa | Rorug03G0246500 |
| rosa_samantha | Rh3AG296900 Rh3BG332900 Rh3CG330000 Rh3DG330600 |
| rosa_wichuraiana | Rw3G026190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 13 |
| AccB1I | GGYRCC | 1 cut(s) | 13 |
| AclWI | GGATC | 1 cut(s) | 323 |
| AcoI | YGGCCR | 1 cut(s) | 395 |
| AfaI | GTAC | 1 cut(s) | 15 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 215, 243 |
| AflIII | ACRYGT | 1 cut(s) | 357 |
| AgsI | TTSAA | 1 cut(s) | 322 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 464, 496 |
| AluBI | AGCT | 1 cut(s) | 554 |
| AluI | AGCT | 1 cut(s) | 554 |
| Alw21I | GWGCWC | 1 cut(s) | 436 |
| Alw26I | GTCTC | 1 cut(s) | 254 |
| AlwI | GGATC | 1 cut(s) | 323 |
| Ama87I | CYCGRG | 1 cut(s) | 255 |
| AoxI | GGCC | 1 cut(s) | 395 |
| ApeKI | GCWGC | 2 cut(s) | 64, 248 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 405, 437 |
| Asp718I | GGTACC | 1 cut(s) | 13 |
| AsuHPI | GGTGA | 1 cut(s) | 311 |
| AvaI | CYCGRG | 1 cut(s) | 255 |
| BalI | TGGCCA | 1 cut(s) | 397 |
| BanI | GGYRCC | 1 cut(s) | 13 |
| Bbv12I | GWGCWC | 1 cut(s) | 436 |
| BbvI | GCAGC | 2 cut(s) | 76, 260 |
| BccI | CCATC | 1 cut(s) | 565 |
| BcoDI | GTCTC | 1 cut(s) | 254 |
| BfaI | CTAG | 2 cut(s) | 161, 555 |
| BisI | GCNGC | 2 cut(s) | 65, 249 |
| BlsI | GCNGC | 2 cut(s) | 66, 250 |
| BmeT110I | CYCGRG | 1 cut(s) | 255 |
| BmiI | GGNNCC | 1 cut(s) | 15 |
| BmrI | ACTGGG | 1 cut(s) | 314 |
| BmsI | GCATC | 2 cut(s) | 139, 328 |
| BmuI | ACTGGG | 1 cut(s) | 314 |
| BpuEI | CTTGAG | 1 cut(s) | 420 |
| BsaJI | CCNNGG | 3 cut(s) | 36, 237, 480 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 215, 243 |
| Bse1I | ACTGG | 2 cut(s) | 55, 309 |
| BseDI | CCNNGG | 3 cut(s) | 36, 237, 480 |
| BseGI | GGATG | 3 cut(s) | 104, 432, 474 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 215, 243 |
| BseMII | CTCAG | 2 cut(s) | 424, 524 |
| BseNI | ACTGG | 2 cut(s) | 55, 309 |
| BseXI | GCAGC | 2 cut(s) | 76, 260 |
| BshFI | GGCC | 1 cut(s) | 397 |
| BshNI | GGYRCC | 1 cut(s) | 13 |
| BsiHKAI | GWGCWC | 1 cut(s) | 436 |
| BsiHKCI | CYCGRG | 1 cut(s) | 255 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 215, 243 |
| BsmAI | GTCTC | 1 cut(s) | 254 |
| BsmBI | CGTCTC | 1 cut(s) | 254 |
| BsmI | GAATGC | 1 cut(s) | 204 |
| BsnI | GGCC | 1 cut(s) | 397 |
| BsoBI | CYCGRG | 1 cut(s) | 255 |
| Bsp1286I | GDGCHC | 1 cut(s) | 436 |
| Bsp143I | GATC | 2 cut(s) | 315, 538 |
| BspANI | GGCC | 1 cut(s) | 397 |
| BspCNI | CTCAG | 2 cut(s) | 423, 523 |
| BspLI | GGNNCC | 1 cut(s) | 15 |
| BspPI | GGATC | 1 cut(s) | 323 |
| BspT107I | GGYRCC | 1 cut(s) | 13 |
| BsrI | ACTGG | 2 cut(s) | 55, 309 |
| BssECI | CCNNGG | 3 cut(s) | 36, 237, 480 |
| BssMI | GATC | 2 cut(s) | 315, 538 |
| BssT1I | CCWWGG | 3 cut(s) | 36, 237, 480 |
| Bst4CI | ACNGT | 1 cut(s) | 353 |
| BstC8I | GCNNGC | 2 cut(s) | 56, 458 |
| BstDEI | CTNAG | 2 cut(s) | 410, 510 |
| BstF5I | GGATG | 3 cut(s) | 104, 432, 474 |
| BstKTI | GATC | 2 cut(s) | 318, 541 |
| BstMAI | GTCTC | 1 cut(s) | 254 |
| BstMBI | GATC | 2 cut(s) | 315, 538 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 64, 440 |
| BstNSI | RCATGY | 2 cut(s) | 361, 579 |
| BstV1I | GCAGC | 2 cut(s) | 76, 260 |
| BstX2I | RGATCY | 1 cut(s) | 315 |
| BstYI | RGATCY | 1 cut(s) | 315 |
| BsuRI | GGCC | 1 cut(s) | 397 |
| BtsCI | GGATG | 3 cut(s) | 104, 432, 474 |
| BtsIMutI | CAGTG | 1 cut(s) | 48 |
| Cac8I | GCNNGC | 2 cut(s) | 56, 458 |
| Csp6I | GTAC | 1 cut(s) | 14 |
| CviAII | CATG | 5 cut(s) | 146, 335, 358, 542, 576 |
| CviJI | RGCY | 5 cut(s) | 251, 333, 397, 479, 554 |
| CviKI_1 | RGCY | 5 cut(s) | 251, 333, 397, 479, 554 |
| CviQI | GTAC | 1 cut(s) | 14 |
| DdeI | CTNAG | 2 cut(s) | 410, 510 |
| DpnI | GATC | 2 cut(s) | 317, 540 |
| DpnII | GATC | 2 cut(s) | 315, 538 |
| EaeI | YGGCCR | 1 cut(s) | 395 |
| Eco130I | CCWWGG | 3 cut(s) | 36, 237, 480 |
| Eco88I | CYCGRG | 1 cut(s) | 255 |
| EcoT14I | CCWWGG | 3 cut(s) | 36, 237, 480 |
| ErhI | CCWWGG | 3 cut(s) | 36, 237, 480 |
| Esp3I | CGTCTC | 1 cut(s) | 254 |
| FaeI | CATG | 5 cut(s) | 149, 338, 361, 545, 579 |
| FatI | CATG | 5 cut(s) | 145, 334, 357, 541, 575 |
| Fnu4HI | GCNGC | 2 cut(s) | 65, 249 |
| FokI | GGATG | 3 cut(s) | 111, 439, 481 |
| Fsp4HI | GCNGC | 2 cut(s) | 65, 249 |
| FspBI | CTAG | 2 cut(s) | 161, 555 |
| GluI | GCNGC | 2 cut(s) | 65, 249 |
| HaeIII | GGCC | 1 cut(s) | 397 |
| Hin1II | CATG | 5 cut(s) | 149, 338, 361, 545, 579 |
| HinfI | GANTC | 4 cut(s) | 133, 233, 288, 406 |
| HphI | GGTGA | 1 cut(s) | 311 |
| Hpy166II | GTNNAC | 1 cut(s) | 302 |
| Hpy188I | TCNGA | 2 cut(s) | 413, 570 |
| Hpy188III | TCNNGA | 6 cut(s) | 20, 255, 322, 377, 437, 524 |
| Hpy8I | GTNNAC | 1 cut(s) | 302 |
| Hpy99I | CGWCG | 1 cut(s) | 87 |
| HpyAV | CCTTC | 2 cut(s) | 236, 411 |
| HpyCH4III | ACNGT | 1 cut(s) | 353 |
| HpyCH4IV | ACGT | 1 cut(s) | 263 |
| HpyCH4V | TGCA | 2 cut(s) | 64, 152 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 64, 440 |
| HpyF3I | CTNAG | 2 cut(s) | 410, 510 |
| HpySE526I | ACGT | 1 cut(s) | 263 |
| Hsp92II | CATG | 5 cut(s) | 149, 338, 361, 545, 579 |
| KpnI | GGTACC | 1 cut(s) | 17 |
| Kzo9I | GATC | 2 cut(s) | 315, 538 |
| LmnI | GCTCC | 1 cut(s) | 379 |
| LpnPI | CCDG | 9 cut(s) | 36, 40, 168, 261, 290, 362, 379, 411, 470 |
| Lsp1109I | GCAGC | 2 cut(s) | 76, 260 |
| LweI | GCATC | 2 cut(s) | 139, 328 |
| MaeI | CTAG | 2 cut(s) | 161, 555 |
| MaeII | ACGT | 1 cut(s) | 263 |
| MaeIII | GTNAC | 1 cut(s) | 353 |
| MalI | GATC | 2 cut(s) | 317, 540 |
| MboI | GATC | 2 cut(s) | 315, 538 |
| MboII | GAAGA | 2 cut(s) | 310, 415 |
| MflI | RGATCY | 1 cut(s) | 315 |
| MhlI | GDGCHC | 1 cut(s) | 436 |
| MlsI | TGGCCA | 1 cut(s) | 397 |
| MluCI | AATT | 1 cut(s) | 533 |
| MluNI | TGGCCA | 1 cut(s) | 397 |
| MlyI | GAGTC | 2 cut(s) | 127, 282 |
| MmeI | TCCRAC | 1 cut(s) | 366 |
| MnlI | CCTC | 8 cut(s) | 27, 148, 209, 262, 262, 278, 289, 552 |
| Mox20I | TGGCCA | 1 cut(s) | 397 |
| MscI | TGGCCA | 1 cut(s) | 397 |
| MseI | TTAA | 1 cut(s) | 549 |
| Msp20I | TGGCCA | 1 cut(s) | 397 |
| Mva1269I | GAATGC | 1 cut(s) | 204 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 64, 440 |
| NdeII | GATC | 2 cut(s) | 315, 538 |
| NlaIII | CATG | 5 cut(s) | 149, 338, 361, 545, 579 |
| NlaIV | GGNNCC | 1 cut(s) | 15 |
| NspI | RCATGY | 2 cut(s) | 361, 579 |
| PciI | ACATGT | 1 cut(s) | 357 |
| PctI | GAATGC | 1 cut(s) | 204 |
| PfeI | GAWTC | 2 cut(s) | 233, 406 |
| PkrI | GCNGC | 2 cut(s) | 66, 250 |
| PleI | GAGTC | 2 cut(s) | 127, 282 |
| PpsI | GAGTC | 2 cut(s) | 127, 282 |
| PscI | ACATGT | 1 cut(s) | 357 |
| PspN4I | GGNNCC | 1 cut(s) | 15 |
| PsuI | RGATCY | 1 cut(s) | 315 |
| RsaI | GTAC | 1 cut(s) | 15 |
| RsaNI | GTAC | 1 cut(s) | 14 |
| SaqAI | TTAA | 1 cut(s) | 549 |
| SatI | GCNGC | 2 cut(s) | 65, 249 |
| Sau3AI | GATC | 2 cut(s) | 315, 538 |
| SchI | GAGTC | 2 cut(s) | 127, 282 |
| SduI | GDGCHC | 1 cut(s) | 436 |
| SetI | ASST | 4 cut(s) | 19, 82, 266, 556 |
| SfaNI | GCATC | 2 cut(s) | 139, 328 |
| SmlI | CTYRAG | 2 cut(s) | 18, 435 |
| SmoI | CTYRAG | 2 cut(s) | 18, 435 |
| Sse9I | AATT | 1 cut(s) | 533 |
| SspMI | CTAG | 2 cut(s) | 161, 555 |
| StyI | CCWWGG | 3 cut(s) | 36, 237, 480 |
| TaaI | ACNGT | 1 cut(s) | 353 |
| TaiI | ACGT | 1 cut(s) | 266 |
| TasI | AATT | 1 cut(s) | 533 |
| TfiI | GAWTC | 2 cut(s) | 233, 406 |
| Tru1I | TTAA | 1 cut(s) | 549 |
| Tru9I | TTAA | 1 cut(s) | 549 |
| TscAI | CASTG | 1 cut(s) | 55 |
| TseI | GCWGC | 2 cut(s) | 64, 248 |
| TspDTI | ATGAA | 2 cut(s) | 246, 485 |
| TspRI | CASTG | 1 cut(s) | 55 |
| XceI | RCATGY | 2 cut(s) | 361, 579 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 216 |
| XspI | CTAG | 2 cut(s) | 161, 555 |