zinc-finger of the FCS-type, C2-C2
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53885 AT1G53903 |
| fragaria_vesca | FvH4_6g35720 |
| malus_domestica | MD09G1173600.v1.1 MD17G1153400.v1.1 |
| prunus_persica | Prupe.3G031700_v2.0.a1 |
| pyrus_communis | pycom09g09100 pycom17g14630 |
| rosa_chinensis | RchiOBHm_Chr2g0147731 |
| rosa_laevigata | RLG00000020273 |
| rosa_multiflora | Rmu_sc0000308.1_g000023 |
| rosa_roxburghii | Rroxscaffold_2G00099370 |
| rosa_rugosa | Rorug02G0401400 |
| rosa_samantha | Rh2AG458500 Rh2BG471600 Rh2CG445800 Rh2DG480500 |
| rosa_wichuraiana | Rw2G037480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 216 |
| AcoI | YGGCCR | 1 cut(s) | 337 |
| AfaI | GTAC | 2 cut(s) | 224, 393 |
| AflIII | ACRYGT | 2 cut(s) | 173, 219 |
| AgsI | TTSAA | 1 cut(s) | 70 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 137, 169 |
| AluBI | AGCT | 1 cut(s) | 51 |
| AluI | AGCT | 1 cut(s) | 51 |
| Alw21I | GWGCWC | 1 cut(s) | 53 |
| Alw26I | GTCTC | 1 cut(s) | 285 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 59 |
| AoxI | GGCC | 2 cut(s) | 21, 337 |
| ApeKI | GCWGC | 3 cut(s) | 246, 351, 354 |
| AsuHPI | GGTGA | 1 cut(s) | 242 |
| AsuNHI | GCTAGC | 1 cut(s) | 319 |
| BalI | TGGCCA | 1 cut(s) | 339 |
| BanII | GRGCYC | 1 cut(s) | 53 |
| Bbv12I | GWGCWC | 1 cut(s) | 53 |
| BbvI | GCAGC | 3 cut(s) | 258, 363, 366 |
| BcoDI | GTCTC | 1 cut(s) | 285 |
| BfaI | CTAG | 1 cut(s) | 320 |
| BglII | AGATCT | 1 cut(s) | 84 |
| BisI | GCNGC | 3 cut(s) | 247, 352, 355 |
| BlsI | GCNGC | 3 cut(s) | 248, 353, 356 |
| BmsI | GCATC | 1 cut(s) | 332 |
| BmtI | GCTAGC | 1 cut(s) | 323 |
| BpuEI | CTTGAG | 1 cut(s) | 224 |
| BsaBI | GATNNNNATC | 1 cut(s) | 393 |
| Bse8I | GATNNNNATC | 1 cut(s) | 393 |
| BseJI | GATNNNNATC | 1 cut(s) | 393 |
| BseMII | CTCAG | 2 cut(s) | 66, 141 |
| BseXI | GCAGC | 3 cut(s) | 258, 363, 366 |
| BsgI | GTGCAG | 1 cut(s) | 277 |
| BshFI | GGCC | 2 cut(s) | 23, 339 |
| BsiHKAI | GWGCWC | 1 cut(s) | 53 |
| BsmAI | GTCTC | 1 cut(s) | 285 |
| BsnI | GGCC | 2 cut(s) | 23, 339 |
| Bsp1286I | GDGCHC | 1 cut(s) | 53 |
| Bsp1407I | TGTACA | 2 cut(s) | 222, 391 |
| Bsp143I | GATC | 2 cut(s) | 3, 84 |
| BspANI | GGCC | 2 cut(s) | 23, 339 |
| BspCNI | CTCAG | 2 cut(s) | 65, 142 |
| BspOI | GCTAGC | 1 cut(s) | 323 |
| BsrGI | TGTACA | 2 cut(s) | 222, 391 |
| BssMI | GATC | 2 cut(s) | 3, 84 |
| Bst4CI | ACNGT | 1 cut(s) | 255 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 255 |
| BstAUI | TGTACA | 2 cut(s) | 222, 391 |
| BstC8I | GCNNGC | 2 cut(s) | 140, 321 |
| BstDEI | CTNAG | 5 cut(s) | 52, 150, 295, 363, 374 |
| BstKTI | GATC | 2 cut(s) | 6, 87 |
| BstMAI | GTCTC | 1 cut(s) | 285 |
| BstMBI | GATC | 2 cut(s) | 3, 84 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 255 |
| BstNSI | RCATGY | 2 cut(s) | 177, 223 |
| BstV1I | GCAGC | 3 cut(s) | 258, 363, 366 |
| BstX2I | RGATCY | 1 cut(s) | 84 |
| BstYI | RGATCY | 1 cut(s) | 84 |
| BsuRI | GGCC | 2 cut(s) | 23, 339 |
| BtsIMutI | CAGTG | 2 cut(s) | 60, 260 |
| Cac8I | GCNNGC | 2 cut(s) | 140, 321 |
| CaiI | CAGNNNCTG | 1 cut(s) | 59 |
| Csp6I | GTAC | 2 cut(s) | 223, 392 |
| CviAII | CATG | 2 cut(s) | 174, 220 |
| CviJI | RGCY | 9 cut(s) | 23, 51, 59, 138, 142, 201, 302, 339, 373 |
| CviKI_1 | RGCY | 9 cut(s) | 23, 51, 59, 138, 142, 201, 302, 339, 373 |
| CviQI | GTAC | 2 cut(s) | 223, 392 |
| DdeI | CTNAG | 5 cut(s) | 52, 150, 295, 363, 374 |
| DpnI | GATC | 2 cut(s) | 5, 86 |
| DpnII | GATC | 2 cut(s) | 3, 84 |
| EaeI | YGGCCR | 1 cut(s) | 337 |
| Ecl136II | GAGCTC | 1 cut(s) | 51 |
| Eco147I | AGGCCT | 1 cut(s) | 23 |
| Eco24I | GRGCYC | 1 cut(s) | 53 |
| Eco53kI | GAGCTC | 1 cut(s) | 51 |
| EcoICRI | GAGCTC | 1 cut(s) | 51 |
| EcoT38I | GRGCYC | 1 cut(s) | 53 |
| FaeI | CATG | 2 cut(s) | 177, 223 |
| FaiI | YATR | 7 cut(s) | 42, 80, 175, 184, 221, 251, 431 |
| FatI | CATG | 2 cut(s) | 173, 219 |
| FblI | GTMKAC | 1 cut(s) | 216 |
| Fnu4HI | GCNGC | 3 cut(s) | 247, 352, 355 |
| FriOI | GRGCYC | 1 cut(s) | 53 |
| Fsp4HI | GCNGC | 3 cut(s) | 247, 352, 355 |
| FspBI | CTAG | 1 cut(s) | 320 |
| GluI | GCNGC | 3 cut(s) | 247, 352, 355 |
| HaeIII | GGCC | 2 cut(s) | 23, 339 |
| Hin1II | CATG | 2 cut(s) | 177, 223 |
| HincII | GTYRAC | 1 cut(s) | 37 |
| HindII | GTYRAC | 1 cut(s) | 37 |
| HinfI | GANTC | 2 cut(s) | 367, 411 |
| HphI | GGTGA | 1 cut(s) | 242 |
| Hpy166II | GTNNAC | 2 cut(s) | 37, 217 |
| Hpy8I | GTNNAC | 2 cut(s) | 37, 217 |
| HpyCH4III | ACNGT | 1 cut(s) | 255 |
| HpyCH4V | TGCA | 5 cut(s) | 186, 246, 258, 351, 437 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 255 |
| HpyF3I | CTNAG | 5 cut(s) | 52, 150, 295, 363, 374 |
| Hsp92II | CATG | 2 cut(s) | 177, 223 |
| Kzo9I | GATC | 2 cut(s) | 3, 84 |
| LpnPI | CCDG | 4 cut(s) | 152, 162, 244, 316 |
| Lsp1109I | GCAGC | 3 cut(s) | 258, 363, 366 |
| LweI | GCATC | 1 cut(s) | 332 |
| MaeI | CTAG | 1 cut(s) | 320 |
| MaeIII | GTNAC | 1 cut(s) | 176 |
| MalI | GATC | 2 cut(s) | 5, 86 |
| MboI | GATC | 2 cut(s) | 3, 84 |
| MboII | GAAGA | 2 cut(s) | 114, 398 |
| MflI | RGATCY | 1 cut(s) | 84 |
| MhlI | GDGCHC | 1 cut(s) | 53 |
| MlsI | TGGCCA | 1 cut(s) | 339 |
| MluCI | AATT | 1 cut(s) | 28 |
| MluNI | TGGCCA | 1 cut(s) | 339 |
| MlyI | GAGTC | 1 cut(s) | 376 |
| MmeI | TCCRAC | 1 cut(s) | 43 |
| MnlI | CCTC | 4 cut(s) | 34, 205, 221, 292 |
| Mox20I | TGGCCA | 1 cut(s) | 339 |
| MscI | TGGCCA | 1 cut(s) | 339 |
| MseI | TTAA | 3 cut(s) | 128, 197, 442 |
| Msp20I | TGGCCA | 1 cut(s) | 339 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 255 |
| NdeII | GATC | 2 cut(s) | 3, 84 |
| NheI | GCTAGC | 1 cut(s) | 319 |
| NlaIII | CATG | 2 cut(s) | 177, 223 |
| NmuCI | GTSAC | 1 cut(s) | 176 |
| NspI | RCATGY | 2 cut(s) | 177, 223 |
| PceI | AGGCCT | 1 cut(s) | 23 |
| PciI | ACATGT | 2 cut(s) | 173, 219 |
| PfeI | GAWTC | 1 cut(s) | 411 |
| PkrI | GCNGC | 3 cut(s) | 248, 353, 356 |
| PleI | GAGTC | 1 cut(s) | 375 |
| PpsI | GAGTC | 1 cut(s) | 375 |
| PscI | ACATGT | 2 cut(s) | 173, 219 |
| Psp124BI | GAGCTC | 1 cut(s) | 53 |
| PstNI | CAGNNNCTG | 1 cut(s) | 59 |
| PsuI | RGATCY | 1 cut(s) | 84 |
| RsaI | GTAC | 2 cut(s) | 224, 393 |
| RsaNI | GTAC | 2 cut(s) | 223, 392 |
| SacI | GAGCTC | 1 cut(s) | 53 |
| SaqAI | TTAA | 3 cut(s) | 128, 197, 442 |
| SatI | GCNGC | 3 cut(s) | 247, 352, 355 |
| Sau3AI | GATC | 2 cut(s) | 3, 84 |
| SchI | GAGTC | 1 cut(s) | 376 |
| SduI | GDGCHC | 1 cut(s) | 53 |
| SetI | ASST | 3 cut(s) | 53, 216, 232 |
| SfaNI | GCATC | 1 cut(s) | 332 |
| SmlI | CTYRAG | 1 cut(s) | 203 |
| SmoI | CTYRAG | 1 cut(s) | 203 |
| Sse9I | AATT | 1 cut(s) | 28 |
| SseBI | AGGCCT | 1 cut(s) | 23 |
| SspMI | CTAG | 1 cut(s) | 320 |
| SstI | GAGCTC | 1 cut(s) | 53 |
| StuI | AGGCCT | 1 cut(s) | 23 |
| TaaI | ACNGT | 1 cut(s) | 255 |
| TaqII | GACCGA | 1 cut(s) | 423 |
| TasI | AATT | 1 cut(s) | 28 |
| TatI | WGTACW | 2 cut(s) | 222, 391 |
| TfiI | GAWTC | 1 cut(s) | 411 |
| Tru1I | TTAA | 3 cut(s) | 128, 197, 442 |
| Tru9I | TTAA | 3 cut(s) | 128, 197, 442 |
| TscAI | CASTG | 2 cut(s) | 60, 260 |
| TseFI | GTSAC | 1 cut(s) | 176 |
| TseI | GCWGC | 3 cut(s) | 246, 351, 354 |
| Tsp45I | GTSAC | 1 cut(s) | 176 |
| TspDTI | ATGAA | 2 cut(s) | 114, 297 |
| TspRI | CASTG | 2 cut(s) | 60, 260 |
| XceI | RCATGY | 2 cut(s) | 177, 223 |
| XmiI | GTMKAC | 1 cut(s) | 216 |
| XspI | CTAG | 1 cut(s) | 320 |