Belongs to the CTL (choline transporter-like) family
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0155381 RchiOBHm_Chr5g0058981 RchiOBHm_Chr5g0076361 RchiOBHm_Chr5g0082591 RchiOBHm_Chr7g0187121 |
| rosa_laevigata | RLG00000002482 RLG00000013344 RLG00000020042 RLG00000022826 RLG00000031491 RLG00000033579 RLG00000037047 |
| rosa_roxburghii | Rroxscaffold_1G00061570 Rroxscaffold_4G00301770 Rroxscaffold_4G00327150 Rroxscaffold_5G00367140 |
| rosa_rugosa | Rorug02G0401400 Rorug05G0384900 Rorug07G0201200 |
| rosa_samantha | Rh2AG392300 Rh2BG247500 Rh2BG399800 Rh2DG414600 Rh2DG504800 Rh3AG072600 Rh3BG074600 Rh3CG074200 Rh4BG374200 Rh4CG310700 Rh4CG388200 Rh5AG329000 Rh5BG326100 Rh5BG396600 Rh5CG420400 Rh7AG176200 Rh7BG284900 Rh7CG312600 |
| rosa_wichuraiana | Rw7G012570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1195 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 844, 968 |
| AccI | GTMKAC | 1 cut(s) | 9 |
| AccII | CGCG | 1 cut(s) | 1617 |
| AciI | CCGC | 7 cut(s) | 113, 122, 165, 169, 239, 475, 973 |
| AclWI | GGATC | 3 cut(s) | 978, 1032, 1703 |
| AcoI | YGGCCR | 7 cut(s) | 166, 751, 864, 907, 974, 1360, 2064 |
| AcsI | RAATTY | 1 cut(s) | 795 |
| AcuI | CTGAAG | 2 cut(s) | 1734, 2061 |
| AcyI | GRCGYC | 1 cut(s) | 6 |
| AfaI | GTAC | 5 cut(s) | 332, 935, 1155, 1424, 2269 |
| AfeI | AGCGCT | 1 cut(s) | 372 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 364, 487, 599, 760, 844, 968, 972, 1369, 1425 |
| AflIII | ACRYGT | 1 cut(s) | 12 |
| AhlI | ACTAGT | 1 cut(s) | 1036 |
| AjnI | CCWGG | 5 cut(s) | 753, 759, 1643, 1691, 2132 |
| AleI | CACNNNNGTG | 1 cut(s) | 1010 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 359, 391 |
| Alw21I | GWGCWC | 1 cut(s) | 1389 |
| Alw26I | GTCTC | 7 cut(s) | 110, 291, 540, 664, 896, 1128, 1771 |
| AlwI | GGATC | 3 cut(s) | 978, 1032, 1703 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 418 |
| Ama87I | CYCGRG | 1 cut(s) | 2053 |
| Aor51HI | AGCGCT | 1 cut(s) | 372 |
| ApeKI | GCWGC | 7 cut(s) | 204, 415, 701, 1100, 1174, 1480, 1971 |
| ApoI | RAATTY | 1 cut(s) | 795 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 236, 268 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1077 |
| AspLEI | GCGC | 4 cut(s) | 373, 504, 1619, 1849 |
| AspS9I | GGNCC | 4 cut(s) | 218, 757, 1647, 1841 |
| AsuC2I | CCSGG | 2 cut(s) | 103, 1713 |
| AsuHPI | GGTGA | 3 cut(s) | 378, 1321, 1682 |
| AsuII | TTCGAA | 1 cut(s) | 892 |
| AvaI | CYCGRG | 1 cut(s) | 2053 |
| AvaII | GGWCC | 4 cut(s) | 218, 757, 1647, 1841 |
| BaeGI | GKGCMC | 1 cut(s) | 1200 |
| BalI | TGGCCA | 2 cut(s) | 753, 866 |
| BanI | GGYRCC | 1 cut(s) | 1195 |
| BbsI | GAAGAC | 3 cut(s) | 192, 1353, 2067 |
| Bbv12I | GWGCWC | 1 cut(s) | 1389 |
| BbvCI | CCTCAGC | 1 cut(s) | 74 |
| BbvI | GCAGC | 7 cut(s) | 216, 427, 713, 1087, 1161, 1467, 1958 |
| BccI | CCATC | 8 cut(s) | 281, 287, 399, 823, 856, 1090, 2093, 2300 |
| BceAI | ACGGC | 5 cut(s) | 135, 207, 894, 1375, 2051 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2126, 2160 |
| BciT130I | CCWGG | 5 cut(s) | 755, 761, 1645, 1693, 2134 |
| BcnI | CCSGG | 2 cut(s) | 103, 1713 |
| BcoDI | GTCTC | 7 cut(s) | 110, 291, 540, 664, 896, 1128, 1771 |
| BcuI | ACTAGT | 1 cut(s) | 1036 |
| BfaI | CTAG | 3 cut(s) | 615, 707, 1037 |
| BfmI | CTRYAG | 1 cut(s) | 2238 |
| BfoI | RGCGCY | 2 cut(s) | 374, 505 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1559 |
| BglII | AGATCT | 1 cut(s) | 1653 |
| BlpI | GCTNAGC | 1 cut(s) | 419 |
| Bme1390I | CCNGG | 7 cut(s) | 103, 755, 761, 1645, 1693, 1713, 2134 |
| Bme18I | GGWCC | 4 cut(s) | 218, 757, 1647, 1841 |
| BmeT110I | CYCGRG | 1 cut(s) | 2053 |
| BmgT120I | GGNCC | 4 cut(s) | 218, 757, 1647, 1841 |
| BmiI | GGNNCC | 3 cut(s) | 464, 1197, 1842 |
| BmrFI | CCNGG | 7 cut(s) | 103, 755, 761, 1645, 1693, 1713, 2134 |
| BmsI | GCATC | 7 cut(s) | 88, 247, 613, 1288, 1347, 1637, 2036 |
| BpiI | GAAGAC | 3 cut(s) | 192, 1353, 2067 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 867, 899 |
| BpmI | CTGGAG | 3 cut(s) | 894, 1566, 1675 |
| Bpu10I | CCTNAGC | 1 cut(s) | 74 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 419 |
| Bpu14I | TTCGAA | 1 cut(s) | 892 |
| BpuEI | CTTGAG | 3 cut(s) | 827, 982, 1642 |
| BpuMI | CCSGG | 2 cut(s) | 103, 1713 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1059, 1803 |
| BsaHI | GRCGYC | 1 cut(s) | 6 |
| BsaJI | CCNNGG | 5 cut(s) | 443, 639, 681, 1305, 1992 |
| BsaWI | WCCGGW | 2 cut(s) | 1425, 2008 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 718, 748 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 364, 487, 599, 760, 844, 968, 972, 1369, 1425 |
| Bse1I | ACTGG | 5 cut(s) | 754, 910, 966, 1549, 2026 |
| Bse3DI | GCAATG | 4 cut(s) | 849, 1129, 1363, 1894 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1059, 1803 |
| BseBI | CCWGG | 5 cut(s) | 755, 761, 1645, 1693, 2134 |
| BseDI | CCNNGG | 5 cut(s) | 443, 639, 681, 1305, 1992 |
| BseGI | GGATG | 6 cut(s) | 154, 391, 728, 1060, 2051, 2311 |
| BseJI | GATNNNNATC | 2 cut(s) | 1059, 1803 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 364, 487, 599, 760, 844, 968, 972, 1369, 1425 |
| BseMI | GCAATG | 4 cut(s) | 849, 1129, 1363, 1894 |
| BseMII | CTCAG | 5 cut(s) | 88, 186, 339, 410, 1229 |
| BseNI | ACTGG | 5 cut(s) | 754, 910, 966, 1549, 2026 |
| BseRI | GAGGAG | 2 cut(s) | 656, 863 |
| BseSI | GKGCMC | 1 cut(s) | 1200 |
| BseX3I | CGGCCG | 1 cut(s) | 166 |
| BseXI | GCAGC | 7 cut(s) | 216, 427, 713, 1087, 1161, 1467, 1958 |
| BseYI | CCCAGC | 2 cut(s) | 83, 1562 |
| BsgI | GTGCAG | 1 cut(s) | 1761 |
| Bsh1236I | CGCG | 1 cut(s) | 1617 |
| Bsh1285I | CGRYCG | 1 cut(s) | 169 |
| BshNI | GGYRCC | 1 cut(s) | 1195 |
| BsiEI | CGRYCG | 1 cut(s) | 169 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1389 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2053 |
| BsiSI | CCGG | 7 cut(s) | 102, 110, 172, 1426, 1712, 1844, 2009 |
| BslFI | GGGAC | 5 cut(s) | 118, 739, 1016, 1311, 1835 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 364, 487, 599, 760, 844, 968, 972, 1369, 1425 |
| BsmAI | GTCTC | 7 cut(s) | 110, 291, 540, 664, 896, 1128, 1771 |
| BsmBI | CGTCTC | 2 cut(s) | 110, 540 |
| BsmFI | GGGAC | 5 cut(s) | 118, 739, 1016, 1311, 1835 |
| BsoBI | CYCGRG | 1 cut(s) | 2053 |
| Bsp119I | TTCGAA | 1 cut(s) | 892 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1200, 1389 |
| Bsp1407I | TGTACA | 1 cut(s) | 1153 |
| Bsp143I | GATC | 9 cut(s) | 233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2143 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 419 |
| Bsp19I | CCATGG | 1 cut(s) | 1992 |
| BspACI | CCGC | 7 cut(s) | 113, 122, 165, 169, 239, 475, 973 |
| BspCNI | CTCAG | 5 cut(s) | 87, 187, 340, 411, 1230 |
| BspFNI | CGCG | 1 cut(s) | 1617 |
| BspLI | GGNNCC | 3 cut(s) | 464, 1197, 1842 |
| BspPI | GGATC | 3 cut(s) | 978, 1032, 1703 |
| BspT104I | TTCGAA | 1 cut(s) | 892 |
| BspT107I | GGYRCC | 1 cut(s) | 1195 |
| BsrDI | GCAATG | 4 cut(s) | 849, 1129, 1363, 1894 |
| BsrGI | TGTACA | 1 cut(s) | 1153 |
| BsrI | ACTGG | 5 cut(s) | 754, 910, 966, 1549, 2026 |
| BssECI | CCNNGG | 5 cut(s) | 443, 639, 681, 1305, 1992 |
| BssMI | GATC | 9 cut(s) | 233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2143 |
| BssNI | GRCGYC | 1 cut(s) | 6 |
| BssT1I | CCWWGG | 3 cut(s) | 443, 1305, 1992 |
| Bst2UI | CCWGG | 5 cut(s) | 755, 761, 1645, 1693, 2134 |
| Bst4CI | ACNGT | 9 cut(s) | 599, 1108, 1251, 1411, 1442, 1949, 2159, 2182, 2230 |
| Bst6I | CTCTTC | 1 cut(s) | 1787 |
| BstACI | GRCGYC | 1 cut(s) | 6 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1457 |
| BstAUI | TGTACA | 1 cut(s) | 1153 |
| BstBI | TTCGAA | 1 cut(s) | 892 |
| BstC8I | GCNNGC | 5 cut(s) | 425, 963, 1232, 2027, 2294 |
| BstDEI | CTNAG | 6 cut(s) | 74, 195, 348, 419, 1238, 1390 |
| BstDSI | CCRYGG | 1 cut(s) | 1992 |
| BstF5I | GGATG | 6 cut(s) | 154, 391, 728, 1060, 2051, 2311 |
| BstFNI | CGCG | 1 cut(s) | 1617 |
| BstH2I | RGCGCY | 2 cut(s) | 374, 505 |
| BstHHI | GCGC | 4 cut(s) | 373, 504, 1619, 1849 |
| BstKTI | GATC | 9 cut(s) | 236, 986, 1027, 1092, 1656, 1711, 1734, 1882, 2146 |
| BstMAI | GTCTC | 7 cut(s) | 110, 291, 540, 664, 896, 1128, 1771 |
| BstMBI | GATC | 9 cut(s) | 233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2143 |
| BstMCI | CGRYCG | 1 cut(s) | 169 |
| BstNI | CCWGG | 5 cut(s) | 755, 761, 1645, 1693, 2134 |
| BstNSI | RCATGY | 2 cut(s) | 16, 2029 |
| BstSCI | CCNGG | 7 cut(s) | 101, 753, 759, 1643, 1691, 1711, 2132 |
| BstSFI | CTRYAG | 1 cut(s) | 2238 |
| BstSLI | GKGCMC | 1 cut(s) | 1200 |
| BstUI | CGCG | 1 cut(s) | 1617 |
| BstV1I | GCAGC | 7 cut(s) | 216, 427, 713, 1087, 1161, 1467, 1958 |
| BstV2I | GAAGAC | 3 cut(s) | 192, 1353, 2067 |
| BstX2I | RGATCY | 3 cut(s) | 983, 1024, 1653 |
| BstYI | RGATCY | 3 cut(s) | 983, 1024, 1653 |
| BstZI | CGGCCG | 1 cut(s) | 166 |
| BtgI | CCRYGG | 1 cut(s) | 1992 |
| BtgZI | GCGATG | 1 cut(s) | 575 |
| BtsCI | GGATG | 6 cut(s) | 154, 391, 728, 1060, 2051, 2311 |
| BtsI | GCAGTG | 3 cut(s) | 610, 2158, 2303 |
| Cac8I | GCNNGC | 5 cut(s) | 425, 963, 1232, 2027, 2294 |
| CaiI | CAGNNNCTG | 1 cut(s) | 418 |
| CciNI | GCGGCCGC | 1 cut(s) | 166 |
| CfoI | GCGC | 4 cut(s) | 373, 504, 1619, 1849 |
| Cfr13I | GGNCC | 4 cut(s) | 218, 757, 1647, 1841 |
| CseI | GACGC | 2 cut(s) | 1290, 1486 |
| Csp6I | GTAC | 5 cut(s) | 331, 934, 1154, 1423, 2268 |
| CviQI | GTAC | 5 cut(s) | 331, 934, 1154, 1423, 2268 |
| DdeI | CTNAG | 6 cut(s) | 74, 195, 348, 419, 1238, 1390 |
| DpnI | GATC | 9 cut(s) | 235, 985, 1026, 1091, 1655, 1710, 1733, 1881, 2145 |
| DpnII | GATC | 9 cut(s) | 233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2143 |
| EaeI | YGGCCR | 7 cut(s) | 166, 751, 864, 907, 974, 1360, 2064 |
| EagI | CGGCCG | 1 cut(s) | 166 |
| Eam1104I | CTCTTC | 1 cut(s) | 1787 |
| EarI | CTCTTC | 1 cut(s) | 1787 |
| EciI | GGCGGA | 1 cut(s) | 128 |
| EclXI | CGGCCG | 1 cut(s) | 166 |
| Eco130I | CCWWGG | 3 cut(s) | 443, 1305, 1992 |
| Eco147I | AGGCCT | 3 cut(s) | 435, 995, 2116 |
| Eco32I | GATATC | 1 cut(s) | 2017 |
| Eco47I | GGWCC | 4 cut(s) | 218, 757, 1647, 1841 |
| Eco47III | AGCGCT | 1 cut(s) | 372 |
| Eco52I | CGGCCG | 1 cut(s) | 166 |
| Eco57I | CTGAAG | 2 cut(s) | 1734, 2061 |
| Eco88I | CYCGRG | 1 cut(s) | 2053 |
| EcoRII | CCWGG | 5 cut(s) | 753, 759, 1643, 1691, 2132 |
| EcoRV | GATATC | 1 cut(s) | 2017 |
| EcoT14I | CCWWGG | 3 cut(s) | 443, 1305, 1992 |
| EcoT22I | ATGCAT | 1 cut(s) | 1913 |
| ErhI | CCWWGG | 3 cut(s) | 443, 1305, 1992 |
| Esp3I | CGTCTC | 2 cut(s) | 110, 540 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2276, 2308 |
| FaqI | GGGAC | 5 cut(s) | 118, 739, 1016, 1311, 1835 |
| FblI | GTMKAC | 1 cut(s) | 9 |
| FokI | GGATG | 5 cut(s) | 161, 378, 715, 1067, 2058 |
| FspBI | CTAG | 3 cut(s) | 615, 707, 1037 |
| GlaI | GCGC | 4 cut(s) | 372, 503, 1618, 1848 |
| GsaI | CCCAGC | 2 cut(s) | 87, 1566 |
| GsuI | CTGGAG | 3 cut(s) | 894, 1566, 1675 |
| HaeII | RGCGCY | 2 cut(s) | 374, 505 |
| HapII | CCGG | 7 cut(s) | 102, 110, 172, 1426, 1712, 1844, 2009 |
| HgaI | GACGC | 2 cut(s) | 1290, 1486 |
| HhaI | GCGC | 4 cut(s) | 373, 504, 1619, 1849 |
| Hin1I | GRCGYC | 1 cut(s) | 6 |
| Hin6I | GCGC | 4 cut(s) | 371, 502, 1617, 1847 |
| HinP1I | GCGC | 4 cut(s) | 371, 502, 1617, 1847 |
| HincII | GTYRAC | 4 cut(s) | 10, 835, 1438, 2178 |
| HindII | GTYRAC | 4 cut(s) | 10, 835, 1438, 2178 |
| HindIII | AAGCTT | 1 cut(s) | 582 |
| HpaI | GTTAAC | 2 cut(s) | 835, 2178 |
| HpaII | CCGG | 7 cut(s) | 102, 110, 172, 1426, 1712, 1844, 2009 |
| HphI | GGTGA | 3 cut(s) | 378, 1321, 1682 |
| Hpy166II | GTNNAC | 5 cut(s) | 10, 835, 1213, 1438, 2178 |
| Hpy188I | TCNGA | 9 cut(s) | 359, 545, 656, 682, 698, 1044, 1416, 1530, 1926 |
| Hpy188III | TCNNGA | 8 cut(s) | 95, 180, 231, 395, 806, 1244, 2096, 2197 |
| Hpy8I | GTNNAC | 5 cut(s) | 10, 835, 1213, 1438, 2178 |
| Hpy99I | CGWCG | 2 cut(s) | 11, 1480 |
| HpyAV | CCTTC | 7 cut(s) | 137, 146, 747, 1063, 1124, 1528, 2156 |
| HpyCH4III | ACNGT | 9 cut(s) | 599, 1108, 1251, 1411, 1442, 1949, 2159, 2182, 2230 |
| HpyCH4IV | ACGT | 1 cut(s) | 1324 |
| HpyF3I | CTNAG | 6 cut(s) | 74, 195, 348, 419, 1238, 1390 |
| HpySE526I | ACGT | 1 cut(s) | 1324 |
| Hsp92I | GRCGYC | 1 cut(s) | 6 |
| HspAI | GCGC | 4 cut(s) | 371, 502, 1617, 1847 |
| KspAI | GTTAAC | 2 cut(s) | 835, 2178 |
| Kzo9I | GATC | 9 cut(s) | 233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2143 |
| LmnI | GCTCC | 8 cut(s) | 156, 445, 568, 643, 850, 1384, 1625, 2011 |
| Lsp1109I | GCAGC | 7 cut(s) | 216, 427, 713, 1087, 1161, 1467, 1958 |
| LweI | GCATC | 7 cut(s) | 88, 247, 613, 1288, 1347, 1637, 2036 |
| MaeI | CTAG | 3 cut(s) | 615, 707, 1037 |
| MaeII | ACGT | 1 cut(s) | 1324 |
| MaeIII | GTNAC | 3 cut(s) | 384, 1894, 2153 |
| MalI | GATC | 9 cut(s) | 235, 985, 1026, 1091, 1655, 1710, 1733, 1881, 2145 |
| MboI | GATC | 9 cut(s) | 233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2143 |
| MfeI | CAATTG | 4 cut(s) | 1157, 1272, 1620, 1854 |
| MflI | RGATCY | 3 cut(s) | 983, 1024, 1653 |
| MhlI | GDGCHC | 2 cut(s) | 1200, 1389 |
| MlsI | TGGCCA | 2 cut(s) | 753, 866 |
| MluCI | AATT | 7 cut(s) | 795, 922, 1157, 1272, 1620, 1854, 2088 |
| MluNI | TGGCCA | 2 cut(s) | 753, 866 |
| MlyI | GAGTC | 9 cut(s) | 100, 392, 666, 1249, 1997, 2045, 2117, 2243, 2252 |
| MmeI | TCCRAC | 2 cut(s) | 42, 2085 |
| Mox20I | TGGCCA | 2 cut(s) | 753, 866 |
| Mph1103I | ATGCAT | 1 cut(s) | 1913 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1077 |
| MscI | TGGCCA | 2 cut(s) | 753, 866 |
| MseI | TTAA | 5 cut(s) | 834, 921, 1832, 2177, 2283 |
| MslI | CAYNNNNRTG | 5 cut(s) | 396, 956, 1010, 1055, 2024 |
| Msp20I | TGGCCA | 2 cut(s) | 753, 866 |
| MspA1I | CMGCKG | 3 cut(s) | 239, 418, 872 |
| MspI | CCGG | 7 cut(s) | 102, 110, 172, 1426, 1712, 1844, 2009 |
| MspR9I | CCNGG | 7 cut(s) | 103, 755, 761, 1645, 1693, 1713, 2134 |
| MunI | CAATTG | 4 cut(s) | 1157, 1272, 1620, 1854 |
| MvaI | CCWGG | 5 cut(s) | 755, 761, 1645, 1693, 2134 |
| MvnI | CGCG | 1 cut(s) | 1617 |
| NciI | CCSGG | 2 cut(s) | 103, 1713 |
| NcoI | CCATGG | 1 cut(s) | 1992 |
| NdeII | GATC | 9 cut(s) | 233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2143 |
| NlaIV | GGNNCC | 3 cut(s) | 464, 1197, 1842 |
| NmuCI | GTSAC | 2 cut(s) | 384, 2153 |
| NotI | GCGGCCGC | 1 cut(s) | 166 |
| NsiI | ATGCAT | 1 cut(s) | 1913 |
| NspI | RCATGY | 2 cut(s) | 16, 2029 |
| NspV | TTCGAA | 1 cut(s) | 892 |
| OliI | CACNNNNGTG | 1 cut(s) | 1010 |
| PaeI | GCATGC | 1 cut(s) | 2029 |
| PaeR7I | CTCGAG | 1 cut(s) | 2053 |
| PceI | AGGCCT | 3 cut(s) | 435, 995, 2116 |
| PciI | ACATGT | 1 cut(s) | 12 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1077 |
| PfeI | GAWTC | 5 cut(s) | 657, 1060, 1538, 1804, 1957 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 844, 968 |
| PfoI | TCCNGGA | 2 cut(s) | 1691, 1711 |
| PleI | GAGTC | 9 cut(s) | 100, 391, 666, 1248, 1996, 2045, 2116, 2242, 2251 |
| PpsI | GAGTC | 9 cut(s) | 100, 391, 666, 1248, 1996, 2045, 2116, 2242, 2251 |
| PscI | ACATGT | 1 cut(s) | 12 |
| Psp6I | CCWGG | 5 cut(s) | 753, 759, 1643, 1691, 2132 |
| PspFI | CCCAGC | 2 cut(s) | 83, 1562 |
| PspGI | CCWGG | 5 cut(s) | 753, 759, 1643, 1691, 2132 |
| PspN4I | GGNNCC | 3 cut(s) | 464, 1197, 1842 |
| PspPI | GGNCC | 4 cut(s) | 218, 757, 1647, 1841 |
| PspXI | VCTCGAGB | 1 cut(s) | 2053 |
| PstNI | CAGNNNCTG | 1 cut(s) | 418 |
| PsuI | RGATCY | 3 cut(s) | 983, 1024, 1653 |
| PvuII | CAGCTG | 2 cut(s) | 418, 872 |
| RsaI | GTAC | 5 cut(s) | 332, 935, 1155, 1424, 2269 |
| RsaNI | GTAC | 5 cut(s) | 331, 934, 1154, 1423, 2268 |
| RseI | CAYNNNNRTG | 5 cut(s) | 396, 956, 1010, 1055, 2024 |
| SalI | GTCGAC | 1 cut(s) | 8 |
| SaqAI | TTAA | 5 cut(s) | 834, 921, 1832, 2177, 2283 |
| Sau3AI | GATC | 9 cut(s) | 233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2143 |
| Sau96I | GGNCC | 4 cut(s) | 218, 757, 1647, 1841 |
| SchI | GAGTC | 9 cut(s) | 100, 392, 666, 1249, 1997, 2045, 2117, 2243, 2252 |
| ScrFI | CCNGG | 7 cut(s) | 103, 755, 761, 1645, 1693, 1713, 2134 |
| SduI | GDGCHC | 2 cut(s) | 1200, 1389 |
| SfaNI | GCATC | 7 cut(s) | 88, 247, 613, 1288, 1347, 1637, 2036 |
| SfcI | CTRYAG | 1 cut(s) | 2238 |
| Sfr274I | CTCGAG | 1 cut(s) | 2053 |
| SfuI | TTCGAA | 1 cut(s) | 892 |
| SinI | GGWCC | 4 cut(s) | 218, 757, 1647, 1841 |
| SlaI | CTCGAG | 1 cut(s) | 2053 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 396, 956, 1010, 1055, 2024 |
| SmlI | CTYRAG | 4 cut(s) | 806, 997, 1657, 2053 |
| SmoI | CTYRAG | 4 cut(s) | 806, 997, 1657, 2053 |
| SpeI | ACTAGT | 1 cut(s) | 1036 |
| SphI | GCATGC | 1 cut(s) | 2029 |
| Sse9I | AATT | 7 cut(s) | 795, 922, 1157, 1272, 1620, 1854, 2088 |
| SseBI | AGGCCT | 3 cut(s) | 435, 995, 2116 |
| SsiI | CCGC | 7 cut(s) | 113, 122, 165, 169, 239, 475, 973 |
| SspI | AATATT | 1 cut(s) | 2281 |
| SspMI | CTAG | 3 cut(s) | 615, 707, 1037 |
| StuI | AGGCCT | 3 cut(s) | 435, 995, 2116 |
| StyD4I | CCNGG | 7 cut(s) | 101, 753, 759, 1643, 1691, 1711, 2132 |
| StyI | CCWWGG | 3 cut(s) | 443, 1305, 1992 |
| TaaI | ACNGT | 9 cut(s) | 599, 1108, 1251, 1411, 1442, 1949, 2159, 2182, 2230 |
| TaiI | ACGT | 1 cut(s) | 1327 |
| TaqII | GACCGA | 1 cut(s) | 791 |
| TasI | AATT | 7 cut(s) | 795, 922, 1157, 1272, 1620, 1854, 2088 |
| TatI | WGTACW | 3 cut(s) | 933, 1153, 2267 |
| TauI | GCSGC | 5 cut(s) | 125, 168, 171, 477, 976 |
| TfiI | GAWTC | 5 cut(s) | 657, 1060, 1538, 1804, 1957 |
| Tru1I | TTAA | 5 cut(s) | 834, 921, 1832, 2177, 2283 |
| Tru9I | TTAA | 5 cut(s) | 834, 921, 1832, 2177, 2283 |
| TseFI | GTSAC | 2 cut(s) | 384, 2153 |
| TseI | GCWGC | 7 cut(s) | 204, 415, 701, 1100, 1174, 1480, 1971 |
| Tsp45I | GTSAC | 2 cut(s) | 384, 2153 |
| TspDTI | ATGAA | 7 cut(s) | 165, 294, 522, 1039, 1501, 1547, 1946 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 844, 968 |
| VpaK11BI | GGWCC | 4 cut(s) | 218, 757, 1647, 1841 |
| XapI | RAATTY | 1 cut(s) | 795 |
| XceI | RCATGY | 2 cut(s) | 16, 2029 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2227 |
| XhoI | CTCGAG | 1 cut(s) | 2053 |
| XmiI | GTMKAC | 1 cut(s) | 9 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1077 |
| XspI | CTAG | 3 cut(s) | 615, 707, 1037 |
| Zsp2I | ATGCAT | 1 cut(s) | 1913 |