Rh2DG504800

Formin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0003076
Physical Location & Seq
Forward (+)
72801577 .. 72812192
10616 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG504800.1

Sequence Viewer

Length: 387 bp
ATGCCAGAGTTGCTGGATTTTGATAAGGATCTTATTCATTTGGAAGCTGCCTTTAAGATTCCATTGAAAGCTTTAGCTGAAGAAATGCAAGCCGTGAGTAAAGGTCTTGAAAAGGTTGAGCAAGAACTTGCTGCTGCTAAAAACGACGGTGTAATCTCTTCTGGTTTTCGAAAGGAGAGGATCACGGAATGGAAAAAGAAGTATTTTGAGGTGGAAATGGAAAAGGAAGTGGAGGAGAAAATCAAGGAGATGAATTTGTGTCTTCATGAGGGGGTTTACGATTTTCATATTGGGTTTGTCTTGAAGAAGGAGAAGGAAGGCGATTTTTGGATTTGTGTTGAGGAGAGCAGGAGAGCTGCAGGTCAGATACTGAAATACCACCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FH2 PTEN_C2

Protein Analysis

128

Amino Acids

14.93

Weight (kDa)

5.33

Isoelectric Point (pI)

34.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FH2 PF02181 1 - 84 3.7e-08 Formin Homology 2 Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 350
AclWI GGATC 2 cut(s) 36, 188
AcsI RAATTY 1 cut(s) 253
AcuI CTGAAG 1 cut(s) 99
AgsI TTSAA 3 cut(s) 67, 110, 304
AluBI AGCT 4 cut(s) 47, 71, 77, 356
AluI AGCT 4 cut(s) 47, 71, 77, 356
AlwI GGATC 2 cut(s) 36, 188
AlwNI CAGNNNCTG 1 cut(s) 370
ApeKI GCWGC 4 cut(s) 47, 131, 134, 356
ApoI RAATTY 1 cut(s) 253
AsuII TTCGAA 1 cut(s) 169
BbsI GAAGAC 1 cut(s) 254
BbvI GCAGC 4 cut(s) 34, 118, 121, 343
BceAI ACGGC 1 cut(s) 77
BfmI CTRYAG 1 cut(s) 357
BfuAI ACCTGC 1 cut(s) 350
BisI GCNGC 4 cut(s) 48, 132, 135, 357
BlsI GCNGC 4 cut(s) 49, 133, 136, 358
BpiI GAAGAC 1 cut(s) 254
Bpu14I TTCGAA 1 cut(s) 169
BsaBI GATNNNNATC 1 cut(s) 27
Bse8I GATNNNNATC 1 cut(s) 27
BseJI GATNNNNATC 1 cut(s) 27
BseRI GAGGAG 2 cut(s) 248, 356
BseXI GCAGC 4 cut(s) 34, 118, 121, 343
Bsp119I TTCGAA 1 cut(s) 169
Bsp143I GATC 2 cut(s) 28, 180
BspHI TCATGA 1 cut(s) 265
BspMAI CTGCAG 1 cut(s) 361
BspMI ACCTGC 1 cut(s) 350
BspPI GGATC 2 cut(s) 36, 188
BspT104I TTCGAA 1 cut(s) 169
BssMI GATC 2 cut(s) 28, 180
Bst4CI ACNGT 1 cut(s) 149
Bst6I CTCTTC 1 cut(s) 163
BstBI TTCGAA 1 cut(s) 169
BstC8I GCNNGC 1 cut(s) 90
BstKTI GATC 2 cut(s) 31, 183
BstMBI GATC 2 cut(s) 28, 180
BstMWI GCNNNNNNNGC 1 cut(s) 10
BstSFI CTRYAG 1 cut(s) 357
BstV1I GCAGC 4 cut(s) 34, 118, 121, 343
BstV2I GAAGAC 1 cut(s) 254
BstX2I RGATCY 1 cut(s) 28
BstYI RGATCY 1 cut(s) 28
BveI ACCTGC 1 cut(s) 350
Cac8I GCNNGC 1 cut(s) 90
CaiI CAGNNNCTG 1 cut(s) 370
CciI TCATGA 1 cut(s) 265
CviAII CATG 1 cut(s) 266
CviJI RGCY 5 cut(s) 47, 71, 77, 92, 356
CviKI_1 RGCY 5 cut(s) 47, 71, 77, 92, 356
DpnI GATC 2 cut(s) 30, 182
DpnII GATC 2 cut(s) 28, 180
Eam1104I CTCTTC 1 cut(s) 163
EarI CTCTTC 1 cut(s) 163
Eco57I CTGAAG 1 cut(s) 99
FaeI CATG 1 cut(s) 269
FaiI YATR 3 cut(s) 267, 288, 385
FatI CATG 1 cut(s) 265
Fnu4HI GCNGC 4 cut(s) 48, 132, 135, 357
Fsp4HI GCNGC 4 cut(s) 48, 132, 135, 357
GluI GCNGC 4 cut(s) 48, 132, 135, 357
Hin1II CATG 1 cut(s) 269
HindIII AAGCTT 1 cut(s) 69
HinfI GANTC 1 cut(s) 58
Hpy166II GTNNAC 1 cut(s) 277
Hpy188I TCNGA 1 cut(s) 366
Hpy188III TCNNGA 3 cut(s) 107, 266, 301
Hpy8I GTNNAC 1 cut(s) 277
Hpy99I CGWCG 1 cut(s) 149
HpyAV CCTTC 3 cut(s) 301, 307, 311
HpyCH4III ACNGT 1 cut(s) 149
HpyCH4V TGCA 2 cut(s) 88, 359
HpyF10VI GCNNNNNNNGC 1 cut(s) 10
Hsp92II CATG 1 cut(s) 269
Kzo9I GATC 2 cut(s) 28, 180
LpnPI CCDG 4 cut(s) 18, 147, 334, 345
Lsp1109I GCAGC 4 cut(s) 34, 118, 121, 343
MalI GATC 2 cut(s) 30, 182
MboI GATC 2 cut(s) 28, 180
MboII GAAGA 4 cut(s) 92, 150, 254, 316
MflI RGATCY 1 cut(s) 28
MluCI AATT 1 cut(s) 253
MnlI CCTC 5 cut(s) 171, 202, 226, 262, 334
MseI TTAA 1 cut(s) 54
MwoI GCNNNNNNNGC 1 cut(s) 10
NdeII GATC 2 cut(s) 28, 180
NlaIII CATG 1 cut(s) 269
NspV TTCGAA 1 cut(s) 169
PagI TCATGA 1 cut(s) 265
PfeI GAWTC 1 cut(s) 58
PkrI GCNGC 4 cut(s) 49, 133, 136, 358
PstI CTGCAG 1 cut(s) 361
PstNI CAGNNNCTG 1 cut(s) 370
PsuI RGATCY 1 cut(s) 28
SaqAI TTAA 1 cut(s) 54
SatI GCNGC 4 cut(s) 48, 132, 135, 357
Sau3AI GATC 2 cut(s) 28, 180
SetI ASST 9 cut(s) 49, 73, 79, 106, 117, 213, 358, 364, 384
SfcI CTRYAG 1 cut(s) 357
SfuI TTCGAA 1 cut(s) 169
Sse9I AATT 1 cut(s) 253
TaaI ACNGT 1 cut(s) 149
TaqI TCGA 1 cut(s) 169
TasI AATT 1 cut(s) 253
TfiI GAWTC 1 cut(s) 58
Tru1I TTAA 1 cut(s) 54
Tru9I TTAA 1 cut(s) 54
TseI GCWGC 4 cut(s) 47, 131, 134, 356
TspDTI ATGAA 4 cut(s) 26, 254, 266, 275
TspGWI ACGGA 1 cut(s) 200
XapI RAATTY 1 cut(s) 253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.