Rh3CG074200

Formin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0003076
Physical Location & Seq
Forward (+)
5807461 .. 5811881
4421 bp
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UTR
Exon/CDS
Intron
Rh3CG074200.1

Sequence Viewer

Length: 402 bp
ATGGCCAAATGGCTGATTTTGTTTTTGTTTTTCATAGAAATGCTTATTGCTGAGAAAATGCCAGAGTTGCTGGATTTTGATAAGGATCTTATTCATTTGGAAGCTGCCTCTAAGATTCCATTGAAAGATTTAGCTGAAGAAATGCAAGCCGTGAGTAAAGGTCTTGAAAAGGTTGAGCAAGAACTTGCTGCTGCTGAAAACGACGGTGTAATCTCTTCTGGTTTTCGAAAGACTGACCTACAAATCAAAGGGCGAGTCTGCAAGGTGTGGAGAGTGAAGAAATACAGACCTGTTCCTAGAAACAATGGTCTTCAGTTTGTTTTAGTTAATGAGAAGAACGAGGGAATCCAAGGGTCTTTTCTAGAAGCATACTACACCACAATAAGGACTGGGCATAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FH2 PTEN_C2

Protein Analysis

133

Amino Acids

15.24

Weight (kDa)

7.81

Isoelectric Point (pI)

33.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FH2 PF02181 9 - 76 1.7e-11 Formin Homology 2 Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 93
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 2 cut(s) 156, 296
AfiI CCNNNNNNNGG 1 cut(s) 384
AgsI TTSAA 2 cut(s) 124, 167
AjuI GAANNNNNNNTTGG 2 cut(s) 342, 374
AluBI AGCT 2 cut(s) 104, 134
AluI AGCT 2 cut(s) 104, 134
AlwI GGATC 1 cut(s) 93
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 3 cut(s) 104, 188, 191
ArsI GACNNNNNNTTYG 2 cut(s) 240, 272
AsuII TTCGAA 1 cut(s) 226
BalI TGGCCA 1 cut(s) 5
BbsI GAAGAC 1 cut(s) 302
BbvI GCAGC 3 cut(s) 91, 175, 178
BceAI ACGGC 1 cut(s) 134
BfaI CTAG 2 cut(s) 297, 362
BisI GCNGC 3 cut(s) 105, 189, 192
BlsI GCNGC 3 cut(s) 106, 190, 193
BmrI ACTGGG 1 cut(s) 399
BmuI ACTGGG 1 cut(s) 399
BpiI GAAGAC 1 cut(s) 302
Bpu14I TTCGAA 1 cut(s) 226
BsaBI GATNNNNATC 1 cut(s) 84
BsaJI CCNNGG 1 cut(s) 349
Bsc4I CCNNNNNNNGG 1 cut(s) 384
Bse1I ACTGG 1 cut(s) 394
Bse8I GATNNNNATC 1 cut(s) 84
BseDI CCNNGG 1 cut(s) 349
BseJI GATNNNNATC 1 cut(s) 84
BseLI CCNNNNNNNGG 1 cut(s) 384
BseMII CTCAG 1 cut(s) 42
BseNI ACTGG 1 cut(s) 394
BseXI GCAGC 3 cut(s) 91, 175, 178
BshFI GGCC 1 cut(s) 5
BslI CCNNNNNNNGG 1 cut(s) 384
BsnI GGCC 1 cut(s) 5
Bsp119I TTCGAA 1 cut(s) 226
Bsp143I GATC 1 cut(s) 85
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 1 cut(s) 43
BspPI GGATC 1 cut(s) 93
BspT104I TTCGAA 1 cut(s) 226
BsrI ACTGG 1 cut(s) 394
BssECI CCNNGG 1 cut(s) 349
BssMI GATC 1 cut(s) 85
BssT1I CCWWGG 1 cut(s) 349
Bst4CI ACNGT 1 cut(s) 206
Bst6I CTCTTC 1 cut(s) 220
BstBI TTCGAA 1 cut(s) 226
BstC8I GCNNGC 1 cut(s) 147
BstDEI CTNAG 2 cut(s) 51, 111
BstKTI GATC 1 cut(s) 88
BstMBI GATC 1 cut(s) 85
BstMWI GCNNNNNNNGC 1 cut(s) 67
BstV1I GCAGC 3 cut(s) 91, 175, 178
BstV2I GAAGAC 1 cut(s) 302
BstX2I RGATCY 1 cut(s) 85
BstYI RGATCY 1 cut(s) 85
BsuRI GGCC 1 cut(s) 5
Cac8I GCNNGC 1 cut(s) 147
CviJI RGCY 5 cut(s) 5, 13, 104, 134, 149
CviKI_1 RGCY 5 cut(s) 5, 13, 104, 134, 149
DdeI CTNAG 2 cut(s) 51, 111
DpnI GATC 1 cut(s) 87
DpnII GATC 1 cut(s) 85
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 220
EarI CTCTTC 1 cut(s) 220
Eco130I CCWWGG 1 cut(s) 349
Eco57I CTGAAG 2 cut(s) 156, 296
EcoT14I CCWWGG 1 cut(s) 349
ErhI CCWWGG 1 cut(s) 349
FaiI YATR 3 cut(s) 35, 370, 396
Fnu4HI GCNGC 3 cut(s) 105, 189, 192
Fsp4HI GCNGC 3 cut(s) 105, 189, 192
FspBI CTAG 2 cut(s) 297, 362
GluI GCNGC 3 cut(s) 105, 189, 192
HaeIII GGCC 1 cut(s) 5
HinfI GANTC 3 cut(s) 115, 255, 345
Hpy188III TCNNGA 2 cut(s) 164, 362
Hpy99I CGWCG 1 cut(s) 206
HpyCH4III ACNGT 1 cut(s) 206
HpyCH4V TGCA 2 cut(s) 145, 261
HpyF10VI GCNNNNNNNGC 1 cut(s) 67
HpyF3I CTNAG 2 cut(s) 51, 111
Kzo9I GATC 1 cut(s) 85
LpnPI CCDG 5 cut(s) 56, 75, 204, 303, 375
Lsp1109I GCAGC 3 cut(s) 91, 175, 178
MaeI CTAG 2 cut(s) 297, 362
MalI GATC 1 cut(s) 87
MboI GATC 1 cut(s) 85
MboII GAAGA 5 cut(s) 149, 207, 289, 302, 346
MflI RGATCY 1 cut(s) 85
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 264
MnlI CCTC 2 cut(s) 118, 334
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 327
MslI CAYNNNNRTG 1 cut(s) 38
Msp20I TGGCCA 1 cut(s) 5
MwoI GCNNNNNNNGC 1 cut(s) 67
NdeII GATC 1 cut(s) 85
NspV TTCGAA 1 cut(s) 226
PfeI GAWTC 2 cut(s) 115, 345
PkrI GCNGC 3 cut(s) 106, 190, 193
PleI GAGTC 1 cut(s) 263
PpsI GAGTC 1 cut(s) 263
PsuI RGATCY 1 cut(s) 85
RseI CAYNNNNRTG 1 cut(s) 38
SaqAI TTAA 1 cut(s) 327
SatI GCNGC 3 cut(s) 105, 189, 192
Sau3AI GATC 1 cut(s) 85
SchI GAGTC 1 cut(s) 264
SetI ASST 7 cut(s) 106, 136, 163, 174, 240, 267, 292
SfuI TTCGAA 1 cut(s) 226
SmiMI CAYNNNNRTG 1 cut(s) 38
SspMI CTAG 2 cut(s) 297, 362
StyI CCWWGG 1 cut(s) 349
TaaI ACNGT 1 cut(s) 206
TaqI TCGA 1 cut(s) 226
TfiI GAWTC 2 cut(s) 115, 345
Tru1I TTAA 1 cut(s) 327
Tru9I TTAA 1 cut(s) 327
TseI GCWGC 3 cut(s) 104, 188, 191
TspDTI ATGAA 2 cut(s) 22, 83
XbaI TCTAGA 1 cut(s) 361
XspI CTAG 2 cut(s) 297, 362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.