Rh7BG284900

Transport and Golgi organization 2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0003076
Physical Location & Seq
Forward (+)
26779533 .. 26780905
1373 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG284900.1

Sequence Viewer

Length: 258 bp
ATGCACAGGGCTTGTCTTAAGAGCTTGAAGAGTCCAAAGGAATTTTCAAAGGAGTTGGTTAAAGCGGCTCACCACTCACTACTCACCAGTATAATGATATTCGCAGGTCTTCAGTCCAAAACCATGGTTTACCTCTCCAACAGGCCAAAAGGAAAGCCGGTTCTCATTCAAGAGGTTTCTCCAGGCATTCATGTGCTTTCCAATGCAAAGCTTGACTCACCCTGGCACAAGGATATCACCTGTCCAACCCAAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TANGO2

Protein Analysis

85

Amino Acids

9.46

Weight (kDa)

9.8

Isoelectric Point (pI)

56.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TANGO2 PF05742 6 - 77 8.6e-08 Transport and Golgi organisation 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 95
AciI CCGC 1 cut(s) 65
AcsI RAATTY 1 cut(s) 41
AcuI CTGAAG 1 cut(s) 95
AflII CTTAAG 1 cut(s) 17
AgsI TTSAA 3 cut(s) 28, 48, 170
AjnI CCWGG 2 cut(s) 181, 221
AjuI GAANNNNNNNTTGG 2 cut(s) 28, 60
AloI GAACNNNNNNTCC 2 cut(s) 144, 176
AluBI AGCT 2 cut(s) 24, 211
AluI AGCT 2 cut(s) 24, 211
AoxI GGCC 1 cut(s) 143
ApoI RAATTY 1 cut(s) 41
AsuHPI GGTGA 4 cut(s) 62, 76, 210, 229
BbsI GAAGAC 1 cut(s) 101
BciT130I CCWGG 2 cut(s) 183, 223
BfrI CTTAAG 1 cut(s) 17
BfuAI ACCTGC 1 cut(s) 95
BisI GCNGC 1 cut(s) 66
BlsI GCNGC 1 cut(s) 67
Bme1390I CCNGG 2 cut(s) 183, 223
BmrFI CCNGG 2 cut(s) 183, 223
BpiI GAAGAC 1 cut(s) 101
BpmI CTGGAG 1 cut(s) 165
BsaJI CCNNGG 2 cut(s) 123, 221
Bse118I RCCGGY 1 cut(s) 157
Bse1I ACTGG 1 cut(s) 87
BseBI CCWGG 2 cut(s) 183, 223
BseDI CCNNGG 2 cut(s) 123, 221
BseNI ACTGG 1 cut(s) 87
BshFI GGCC 1 cut(s) 145
BsiSI CCGG 1 cut(s) 158
BsmI GAATGC 1 cut(s) 186
BsnI GGCC 1 cut(s) 145
Bsp19I CCATGG 1 cut(s) 123
BspACI CCGC 1 cut(s) 65
BspANI GGCC 1 cut(s) 145
BspMI ACCTGC 1 cut(s) 95
BspTI CTTAAG 1 cut(s) 17
BsrFI RCCGGY 1 cut(s) 157
BsrI ACTGG 1 cut(s) 87
BssAI RCCGGY 1 cut(s) 157
BssECI CCNNGG 2 cut(s) 123, 221
BssT1I CCWWGG 1 cut(s) 123
Bst2UI CCWGG 2 cut(s) 183, 223
Bst6I CTCTTC 1 cut(s) 23
BstAFI CTTAAG 1 cut(s) 17
BstDSI CCRYGG 1 cut(s) 123
BstNI CCWGG 2 cut(s) 183, 223
BstSCI CCNGG 2 cut(s) 181, 221
BstV2I GAAGAC 1 cut(s) 101
BstXI CCANNNNNNTGG 1 cut(s) 124
BsuRI GGCC 1 cut(s) 145
BtgI CCRYGG 1 cut(s) 123
BveI ACCTGC 1 cut(s) 95
Cfr10I RCCGGY 1 cut(s) 157
CviAII CATG 2 cut(s) 124, 191
CviJI RGCY 6 cut(s) 11, 24, 68, 145, 157, 211
CviKI_1 RGCY 6 cut(s) 11, 24, 68, 145, 157, 211
Eam1104I CTCTTC 1 cut(s) 23
EarI CTCTTC 1 cut(s) 23
Eco130I CCWWGG 1 cut(s) 123
Eco32I GATATC 1 cut(s) 235
Eco57I CTGAAG 1 cut(s) 95
EcoRII CCWGG 2 cut(s) 181, 221
EcoRV GATATC 1 cut(s) 235
EcoT14I CCWWGG 1 cut(s) 123
ErhI CCWWGG 1 cut(s) 123
FaeI CATG 2 cut(s) 127, 194
FaiI YATR 3 cut(s) 92, 125, 192
FatI CATG 2 cut(s) 123, 190
Fnu4HI GCNGC 1 cut(s) 66
Fsp4HI GCNGC 1 cut(s) 66
GluI GCNGC 1 cut(s) 66
GsuI CTGGAG 1 cut(s) 165
HaeIII GGCC 1 cut(s) 145
HapII CCGG 1 cut(s) 158
Hin1II CATG 2 cut(s) 127, 194
HindIII AAGCTT 1 cut(s) 209
HinfI GANTC 2 cut(s) 31, 215
HpaII CCGG 1 cut(s) 158
HphI GGTGA 4 cut(s) 62, 76, 210, 229
Hpy166II GTNNAC 1 cut(s) 130
Hpy188I TCNGA 1 cut(s) 257
Hpy188III TCNNGA 1 cut(s) 170
Hpy8I GTNNAC 1 cut(s) 130
HpyCH4V TGCA 2 cut(s) 4, 206
Hsp92II CATG 2 cut(s) 127, 194
LpnPI CCDG 9 cut(s) 90, 100, 127, 168, 171, 195, 208, 235, 253
MboII GAAGA 2 cut(s) 40, 101
MluCI AATT 1 cut(s) 41
MlyI GAGTC 2 cut(s) 40, 209
MmeI TCCRAC 1 cut(s) 162
MnlI CCTC 2 cut(s) 143, 166
MseI TTAA 2 cut(s) 18, 60
MslI CAYNNNNRTG 1 cut(s) 191
MspCI CTTAAG 1 cut(s) 17
MspI CCGG 1 cut(s) 158
MspR9I CCNGG 2 cut(s) 183, 223
Mva1269I GAATGC 1 cut(s) 186
MvaI CCWGG 2 cut(s) 183, 223
NcoI CCATGG 1 cut(s) 123
NlaIII CATG 2 cut(s) 127, 194
PctI GAATGC 1 cut(s) 186
PkrI GCNGC 1 cut(s) 67
PleI GAGTC 2 cut(s) 39, 209
PpsI GAGTC 2 cut(s) 39, 209
Psp6I CCWGG 2 cut(s) 181, 221
PspGI CCWGG 2 cut(s) 181, 221
RseI CAYNNNNRTG 1 cut(s) 191
SaqAI TTAA 2 cut(s) 18, 60
SatI GCNGC 1 cut(s) 66
SchI GAGTC 2 cut(s) 40, 209
ScrFI CCNGG 2 cut(s) 183, 223
SetI ASST 6 cut(s) 26, 109, 135, 177, 213, 242
SmiMI CAYNNNNRTG 1 cut(s) 191
SmlI CTYRAG 1 cut(s) 17
SmoI CTYRAG 1 cut(s) 17
Sse9I AATT 1 cut(s) 41
SsiI CCGC 1 cut(s) 65
StyD4I CCNGG 2 cut(s) 181, 221
StyI CCWWGG 1 cut(s) 123
TasI AATT 1 cut(s) 41
TauI GCSGC 1 cut(s) 68
Tru1I TTAA 2 cut(s) 18, 60
Tru9I TTAA 2 cut(s) 18, 60
TspDTI ATGAA 1 cut(s) 179
Vha464I CTTAAG 1 cut(s) 17
XapI RAATTY 1 cut(s) 41
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.