Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0008560

Physical Location & Seq

Genomic Coordinates Reverse (-)

3245429 .. 3252354

Gene Structure 6926 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G045200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGTCTTACGCATCTCATATCATCCACCACTCGAAAAAGTTAAGGAATGCTTCCAACTTACTACGGCAAGAGCAGGCCCTCTTGGTTCGTTTTTTTTCTCATGATGCTCAACCATCTATTGATATACGGAAGGCCCATCGCCACAGTTATGTGCCTTCAGAAAGAGCAAGAGTTTGTAGGTCTTTCAGCAGTACCACTAAATCATTGTCGGGTACATTTACCAGGGATGTCTCAACGACAACGAAACTAGGAAATTCAATTTCTGGTTCGGTATCCAACAAACAGCTTTCATGTATGCAGGTGCAATTGAGGAGAGGCTTTTCATCCGATGCAGCCCTTCCTCCACACCAAGAACTTGGAATGCCTTCTCTTTCACCCACTATGTCTGAGGGTAATATTGCAAGGTGGTTGAAGAAAGAGGGCGATAAAGTTTCTCCTGGTGAAGTGCTCTGTGAAGTTGAAACTGATAAAGCTACAGTGGAGATGGAAAGCATGGAAGACGGTTATCTTGCCAAGATTGTACGAGGAGATGGGACCCAAGGAATCAAAGTTGGTGAGGTGATTGCAATAACTGTTGAAGATGAGGAAGATATTGCAAAATTTAAAGATTACACACCATCAGCATCAGGTGCCAGCGCTGCTGCAGCTAAAGCGTCACCTGAGCCTACCCCTCCCAAAAAGGAGGTGGTTGAAGAACCAGTTACTTCTCCAGAGCCAAAGGTTTCAAAGCCCACTGCAGCTGCCCCTTCTGGTGATCGCATATTTGCTAGTCCTCTTGCAAGAAACTTGGCTGAAGAGCACAAGGTGCCCCTATCAAGTATCAAAGGAACGGGTCCTGATGGAAGCATTGTGAAGGCTGATGTTGAAGAGTATTTGGCTTCCCGTGGGAAGGAAGCTCCCAAAGCTAAGGGCGGGGCACCTGCAGCATTAGCATTAGATTACACCGATATCCCTCATTCTCAGATACGGAAGATCACAGCTTCGAGATTATTATTATCAAAGCAAACAATTCCTCATTATTATTTGACTGTAGATACATGTGTTGACAGACTCATGGATTTGAGAGGCCAACTCAATGCATTACAAGAAGCATCAGGTGGGAAGCGGTTATCTGTTAATGATCTCGTAATTAAGGCTGCTGCTTTGGCTCTTCAAAAGGTTCCTCAATGCAATAGTTCATGGACAGATGATCACATCCGCCAGTTTCACAATGTGAACATTAATGTTGCAGTGCAGACAGAAAATGGACTCTTTGTGCCTGTCGTTAGGGATGCAAACAAGAAGGGACTCTCCAGCATAGCTGAGGAGGTCAGGCAGCTGGCCCAAAAAGCCAGAGAGAACAGCTTAAAGCCAGAAGATTATGAGGGAGGCACATTTACAGTAACGAATTTGGGAGGTCCATTTGGCATCAAGCAATTTTGTGCCATCATTAACCCTCCTCAATCAGGCATTCTTGCAGTTGGATCAGCTGAGAAGAGGGTTGTACCTAGTTCTGGGCCCGAGCAATACCAGTTTGCTTCCTTCATGTCTGTAACACTAAGCTGTGATCATCGTGTTATTGATGGTGCAATCGGTGCGGAATGGCTTAAAGCATTCAAAGGCTACATTGAGAACCCCGAGTCGATGTTGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

2-oxoacid_dh Biotin_lipoyl E3_binding

Protein Analysis

545

Amino Acids

58.8

Weight (kDa)

8.03

Isoelectric Point (pI)

48.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008560)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54220 AT1G54220 AT3G13930
fragaria_vesca	FvH4_6g34140 FvH4_6g34140 FvH4_6g34140
malus_domestica	MD09G1188500.v1.1 MD17G1172600.v1.1
prunus_persica	Prupe.3G045200_v2.0.a1 Prupe.3G045200_v2.0.a1
pyrus_communis	pycom09g10560 pycom17g17050
rosa_chinensis	RchiOBHm_Chr2g0144451
rosa_laevigata	RLG00000020082
rosa_multiflora	Rmu_sc0003475.1_g000006
rosa_roxburghii	Rroxscaffold_2G00101300
rosa_rugosa	Rorug02G0386700 Rorug02G0386800
rosa_samantha	Rh2AG439000 Rh2BG449300 Rh2CG426100 Rh2DG459100
rosa_wichuraiana	Rw2G035920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	289, 928
Acc36I	ACCTGC	2 cut(s)	289, 928
AccB1I	GGYRCC	3 cut(s)	629, 805, 916
AciI	CCGC	4 cut(s)	912, 1105, 1198, 1577
AclWI	GGATC	1 cut(s)	1471
AcsI	RAATTY	3 cut(s)	253, 599, 1387
AcuI	CTGAAG	2 cut(s)	141, 813
AdeI	CACNNNGTG	2 cut(s)	805, 1213
AfaI	GTAC	4 cut(s)	193, 214, 522, 1485
AfeI	AGCGCT	1 cut(s)	637
AfiI	CCNNNNNNNGG	3 cut(s)	889, 1445, 1493
AflIII	ACRYGT	1 cut(s)	1037
AgsI	TTSAA	9 cut(s)	258, 412, 461, 578, 692, 726, 866, 1154, 1597
AjnI	CCWGG	2 cut(s)	221, 436
Alw21I	GWGCWC	2 cut(s)	450, 801
Alw26I	GTCTC	1 cut(s)	235
AlwI	GGATC	1 cut(s)	1471
Ama87I	CYCGRG	2 cut(s)	1499, 1616
Aor51HI	AGCGCT	1 cut(s)	637
AoxI	GGCC	5 cut(s)	75, 132, 1066, 1320, 1496
ApaI	GGGCCC	1 cut(s)	1500
ApoI	RAATTY	3 cut(s)	253, 599, 1387
AseI	ATTAAT	1 cut(s)	1221
Asp700I	GAANNNNTTC	1 cut(s)	364
AspLEI	GCGC	1 cut(s)	638
AspS9I	GGNCC	8 cut(s)	76, 133, 534, 833, 1321, 1397, 1496, 1497
AsuHPI	GGTGA	6 cut(s)	366, 452, 566, 571, 648, 764
AvaI	CYCGRG	2 cut(s)	1499, 1616
AvaII	GGWCC	3 cut(s)	534, 833, 1397
BaeGI	GKGCMC	3 cut(s)	810, 919, 1500
BaeI	ACNNNNGTAYC	2 cut(s)	1026, 1059
BanI	GGYRCC	3 cut(s)	629, 805, 916
BanII	GRGCYC	1 cut(s)	1500
BbsI	GAAGAC	1 cut(s)	504
Bbv12I	GWGCWC	2 cut(s)	450, 801
BbvCI	CCTCAGC	1 cut(s)	1302
BccI	CCATC	8 cut(s)	121, 144, 478, 524, 625, 833, 1433, 1556
BceAI	ACGGC	1 cut(s)	80
BciT130I	CCWGG	2 cut(s)	223, 438
BciVI	GTATCC	1 cut(s)	283
BclI	TGATCA	2 cut(s)	1189, 1546
BcoDI	GTCTC	1 cut(s)	235
BfaI	CTAG	3 cut(s)	248, 768, 1488
BfmI	CTRYAG	5 cut(s)	474, 642, 735, 921, 1029
BfoI	RGCGCY	1 cut(s)	639
BfuAI	ACCTGC	2 cut(s)	289, 928
BfuI	GTATCC	1 cut(s)	283
Bme1390I	CCNGG	2 cut(s)	223, 438
Bme18I	GGWCC	3 cut(s)	534, 833, 1397
BmeT110I	CYCGRG	2 cut(s)	1499, 1616
BmgT120I	GGNCC	8 cut(s)	76, 133, 534, 833, 1321, 1397, 1496, 1497
BmiI	GGNNCC	8 cut(s)	535, 536, 631, 807, 834, 918, 1161, 1498
BmrFI	CCNGG	2 cut(s)	223, 438
BmsI	GCATC	7 cut(s)	20, 94, 319, 632, 1100, 1261, 1416
BpiI	GAAGAC	1 cut(s)	504
BplI	GAGNNNNNCTC	2 cut(s)	1056, 1088
BpmI	CTGGAG	2 cut(s)	693, 1276
Bpu10I	CCTNAGC	3 cut(s)	660, 906, 1302
BsaJI	CCNNGG	3 cut(s)	222, 538, 883
Bsc4I	CCNNNNNNNGG	3 cut(s)	889, 1445, 1493
Bse1I	ACTGG	3 cut(s)	698, 1201, 1510
BseBI	CCWGG	2 cut(s)	223, 438
BseDI	CCNNGG	3 cut(s)	222, 538, 883
BseGI	GGATG	5 cut(s)	21, 232, 323, 1194, 1276
BseLI	CCNNNNNNNGG	3 cut(s)	889, 1445, 1493
BseMII	CTCAG	5 cut(s)	378, 651, 974, 1293, 1461
BseNI	ACTGG	3 cut(s)	698, 1201, 1510
BseRI	GAGGAG	4 cut(s)	325, 540, 1319, 1428
BseSI	GKGCMC	3 cut(s)	810, 919, 1500
BsgI	GTGCAG	1 cut(s)	1253
BshFI	GGCC	5 cut(s)	77, 134, 1068, 1322, 1498
BshNI	GGYRCC	3 cut(s)	629, 805, 916
BsiHKAI	GWGCWC	2 cut(s)	450, 801
BsiHKCI	CYCGRG	2 cut(s)	1499, 1616
BslFI	GGGAC	2 cut(s)	547, 1299
BslI	CCNNNNNNNGG	3 cut(s)	889, 1445, 1493
BsmAI	GTCTC	1 cut(s)	235
BsmFI	GGGAC	2 cut(s)	547, 1299
BsmI	GAATGC	4 cut(s)	52, 366, 1449, 1592
BsnI	GGCC	5 cut(s)	77, 134, 1068, 1322, 1498
BsoBI	CYCGRG	2 cut(s)	1499, 1616
Bsp120I	GGGCCC	1 cut(s)	1496
Bsp1286I	GDGCHC	5 cut(s)	450, 801, 810, 919, 1500
Bsp143I	GATC	6 cut(s)	754, 972, 1120, 1189, 1463, 1546
BspACI	CCGC	4 cut(s)	912, 1105, 1198, 1577
BspANI	GGCC	5 cut(s)	77, 134, 1068, 1322, 1498
BspCNI	CTCAG	5 cut(s)	379, 652, 973, 1294, 1462
BspHI	TCATGA	1 cut(s)	100
BspLI	GGNNCC	8 cut(s)	535, 536, 631, 807, 834, 918, 1161, 1498
BspMAI	CTGCAG	3 cut(s)	646, 739, 925
BspMI	ACCTGC	2 cut(s)	289, 928
BspPI	GGATC	1 cut(s)	1471
BspQI	GCTCTTC	2 cut(s)	789, 1155
BspT107I	GGYRCC	3 cut(s)	629, 805, 916
BsrI	ACTGG	3 cut(s)	698, 1201, 1510
BssECI	CCNNGG	3 cut(s)	222, 538, 883
BssMI	GATC	6 cut(s)	754, 972, 1120, 1189, 1463, 1546
BssT1I	CCWWGG	1 cut(s)	538
Bst2UI	CCWGG	2 cut(s)	223, 438
Bst4CI	ACNGT	6 cut(s)	146, 478, 503, 574, 1030, 1381
Bst6I	CTCTTC	4 cut(s)	789, 861, 1155, 1469
BstAPI	GCANNNNNTGC	3 cut(s)	629, 805, 1574
BstC8I	GCNNGC	3 cut(s)	75, 634, 1320
BstDEI	CTNAG	7 cut(s)	387, 660, 906, 960, 1302, 1470, 1538
BstDSI	CCRYGG	1 cut(s)	883
BstENI	CCTNNNNNAGG	1 cut(s)	1443
BstF5I	GGATG	5 cut(s)	21, 232, 323, 1194, 1276
BstH2I	RGCGCY	1 cut(s)	639
BstHHI	GCGC	1 cut(s)	638
BstKTI	GATC	6 cut(s)	757, 975, 1123, 1192, 1466, 1549
BstMAI	GTCTC	1 cut(s)	235
BstMBI	GATC	6 cut(s)	754, 972, 1120, 1189, 1463, 1546
BstNI	CCWGG	2 cut(s)	223, 438
BstNSI	RCATGY	1 cut(s)	1041
BstSCI	CCNGG	2 cut(s)	221, 436
BstSFI	CTRYAG	5 cut(s)	474, 642, 735, 921, 1029
BstSLI	GKGCMC	3 cut(s)	810, 919, 1500
BstV2I	GAAGAC	1 cut(s)	504
BstXI	CCANNNNNNTGG	1 cut(s)	356
BsuI	GTATCC	1 cut(s)	283
BsuRI	GGCC	5 cut(s)	77, 134, 1068, 1322, 1498
BtgI	CCRYGG	1 cut(s)	883
BtgZI	GCGATG	1 cut(s)	122
BtsCI	GGATG	5 cut(s)	21, 232, 323, 1194, 1276
BtsI	GCAGTG	2 cut(s)	732, 1236
BtsIMutI	CAGTG	3 cut(s)	483, 732, 1236
BveI	ACCTGC	2 cut(s)	289, 928
Cac8I	GCNNGC	3 cut(s)	75, 634, 1320
CciI	TCATGA	1 cut(s)	100
CfoI	GCGC	1 cut(s)	638
Cfr13I	GGNCC	8 cut(s)	76, 133, 534, 833, 1321, 1397, 1496, 1497
CseI	GACGC	1 cut(s)	642
Csp6I	GTAC	4 cut(s)	192, 213, 521, 1484
CviAII	CATG	7 cut(s)	101, 291, 493, 1038, 1054, 1179, 1525
CviQI	GTAC	4 cut(s)	192, 213, 521, 1484
DdeI	CTNAG	7 cut(s)	387, 660, 906, 960, 1302, 1470, 1538
DpnI	GATC	6 cut(s)	756, 974, 1122, 1191, 1465, 1548
DpnII	GATC	6 cut(s)	754, 972, 1120, 1189, 1463, 1546
DraI	TTTAAA	1 cut(s)	604
DraIII	CACNNNGTG	2 cut(s)	805, 1213
Eam1104I	CTCTTC	4 cut(s)	789, 861, 1155, 1469
EarI	CTCTTC	4 cut(s)	789, 861, 1155, 1469
EciI	GGCGGA	1 cut(s)	1187
Eco130I	CCWWGG	1 cut(s)	538
Eco24I	GRGCYC	1 cut(s)	1500
Eco32I	GATATC	1 cut(s)	949
Eco47I	GGWCC	3 cut(s)	534, 833, 1397
Eco47III	AGCGCT	1 cut(s)	637
Eco57I	CTGAAG	2 cut(s)	141, 813
Eco88I	CYCGRG	2 cut(s)	1499, 1616
EcoNI	CCTNNNNNAGG	1 cut(s)	1443
EcoO109I	RGGNCCY	3 cut(s)	76, 534, 833
EcoRII	CCWGG	2 cut(s)	221, 436
EcoRV	GATATC	1 cut(s)	949
EcoT14I	CCWWGG	1 cut(s)	538
EcoT22I	ATGCAT	1 cut(s)	1081
EcoT38I	GRGCYC	1 cut(s)	1500
ErhI	CCWWGG	1 cut(s)	538
FaeI	CATG	7 cut(s)	104, 294, 496, 1041, 1057, 1182, 1528
FalI	AAGNNNNNCTT	2 cut(s)	34, 66
FaqI	GGGAC	2 cut(s)	547, 1299
FatI	CATG	7 cut(s)	100, 290, 492, 1037, 1053, 1178, 1524
FauI	CCCGC	1 cut(s)	905
FbaI	TGATCA	2 cut(s)	1189, 1546
FokI	GGATG	5 cut(s)	8, 239, 310, 1181, 1283
FriOI	GRGCYC	1 cut(s)	1500
FspBI	CTAG	3 cut(s)	248, 768, 1488
GlaI	GCGC	1 cut(s)	637
GsuI	CTGGAG	2 cut(s)	693, 1276
HaeII	RGCGCY	1 cut(s)	639
HaeIII	GGCC	5 cut(s)	77, 134, 1068, 1322, 1498
HgaI	GACGC	1 cut(s)	642
HhaI	GCGC	1 cut(s)	638
Hin1II	CATG	7 cut(s)	104, 294, 496, 1041, 1057, 1182, 1528
Hin6I	GCGC	1 cut(s)	636
HinP1I	GCGC	1 cut(s)	636
HincII	GTYRAC	1 cut(s)	1045
HindII	GTYRAC	1 cut(s)	1045
HinfI	GANTC	5 cut(s)	543, 1050, 1248, 1287, 1619
HphI	GGTGA	6 cut(s)	366, 452, 566, 571, 648, 764
Hpy166II	GTNNAC	2 cut(s)	1045, 1216
Hpy188I	TCNGA	4 cut(s)	160, 328, 388, 963
Hpy188III	TCNNGA	4 cut(s)	101, 710, 836, 984
Hpy8I	GTNNAC	2 cut(s)	1045, 1216
HpyAV	CCTTC	9 cut(s)	124, 165, 347, 375, 756, 847, 883, 1276, 1531
HpyCH4III	ACNGT	6 cut(s)	146, 478, 503, 574, 1030, 1381
HpyF3I	CTNAG	7 cut(s)	387, 660, 906, 960, 1302, 1470, 1538
Hsp92II	CATG	7 cut(s)	104, 294, 496, 1041, 1057, 1182, 1528
HspAI	GCGC	1 cut(s)	636
KflI	GGGWCCC	1 cut(s)	534
Ksp22I	TGATCA	2 cut(s)	1189, 1546
Kzo9I	GATC	6 cut(s)	754, 972, 1120, 1189, 1463, 1546
LguI	GCTCTTC	2 cut(s)	789, 1155
LmnI	GCTCC	1 cut(s)	901
LweI	GCATC	7 cut(s)	20, 94, 319, 632, 1100, 1261, 1416
MaeI	CTAG	3 cut(s)	248, 768, 1488
MaeIII	GTNAC	4 cut(s)	654, 700, 1381, 1531
MalI	GATC	6 cut(s)	756, 974, 1122, 1191, 1465, 1548
MboI	GATC	6 cut(s)	754, 972, 1120, 1189, 1463, 1546
MfeI	CAATTG	1 cut(s)	305
MhlI	GDGCHC	5 cut(s)	450, 801, 810, 919, 1500
MluCI	AATT	8 cut(s)	253, 258, 305, 599, 1008, 1128, 1387, 1415
MlyI	GAGTC	4 cut(s)	1044, 1242, 1281, 1628
MmeI	TCCRAC	3 cut(s)	78, 300, 1441
Mph1103I	ATGCAT	1 cut(s)	1081
MroXI	GAANNNNTTC	1 cut(s)	364
MseI	TTAA	8 cut(s)	41, 603, 1116, 1131, 1221, 1346, 1431, 1587
MslI	CAYNNNNRTG	1 cut(s)	147
MspA1I	CMGCKG	3 cut(s)	740, 1318, 1469
MspR9I	CCNGG	2 cut(s)	223, 438
MunI	CAATTG	1 cut(s)	305
Mva1269I	GAATGC	4 cut(s)	52, 366, 1449, 1592
MvaI	CCWGG	2 cut(s)	223, 438
NdeII	GATC	6 cut(s)	754, 972, 1120, 1189, 1463, 1546
NlaIII	CATG	7 cut(s)	104, 294, 496, 1041, 1057, 1182, 1528
NlaIV	GGNNCC	8 cut(s)	535, 536, 631, 807, 834, 918, 1161, 1498
NmuCI	GTSAC	1 cut(s)	654
NsiI	ATGCAT	1 cut(s)	1081
NspI	RCATGY	1 cut(s)	1041
PagI	TCATGA	1 cut(s)	100
PaqCI	CACCTGC	2 cut(s)	289, 928
PciI	ACATGT	1 cut(s)	1037
PciSI	GCTCTTC	2 cut(s)	789, 1155
PctI	GAATGC	4 cut(s)	52, 366, 1449, 1592
PdmI	GAANNNNTTC	1 cut(s)	364
PfeI	GAWTC	1 cut(s)	543
PleI	GAGTC	4 cut(s)	1044, 1242, 1281, 1627
PpsI	GAGTC	4 cut(s)	1044, 1242, 1281, 1627
PpuMI	RGGWCCY	2 cut(s)	534, 833
PscI	ACATGT	1 cut(s)	1037
PshBI	ATTAAT	1 cut(s)	1221
Psp5II	RGGWCCY	2 cut(s)	534, 833
Psp6I	CCWGG	2 cut(s)	221, 436
PspGI	CCWGG	2 cut(s)	221, 436
PspN4I	GGNNCC	8 cut(s)	535, 536, 631, 807, 834, 918, 1161, 1498
PspOMI	GGGCCC	1 cut(s)	1496
PspPI	GGNCC	8 cut(s)	76, 133, 534, 833, 1321, 1397, 1496, 1497
PspPPI	RGGWCCY	2 cut(s)	534, 833
PstI	CTGCAG	3 cut(s)	646, 739, 925
PvuII	CAGCTG	3 cut(s)	740, 1318, 1469
RsaI	GTAC	4 cut(s)	193, 214, 522, 1485
RsaNI	GTAC	4 cut(s)	192, 213, 521, 1484
RseI	CAYNNNNRTG	1 cut(s)	147
SapI	GCTCTTC	2 cut(s)	789, 1155
SaqAI	TTAA	8 cut(s)	41, 603, 1116, 1131, 1221, 1346, 1431, 1587
Sau3AI	GATC	6 cut(s)	754, 972, 1120, 1189, 1463, 1546
Sau96I	GGNCC	8 cut(s)	76, 133, 534, 833, 1321, 1397, 1496, 1497
SchI	GAGTC	4 cut(s)	1044, 1242, 1281, 1628
ScrFI	CCNGG	2 cut(s)	223, 438
SduI	GDGCHC	5 cut(s)	450, 801, 810, 919, 1500
SfaNI	GCATC	7 cut(s)	20, 94, 319, 632, 1100, 1261, 1416
SfcI	CTRYAG	5 cut(s)	474, 642, 735, 921, 1029
SinI	GGWCC	3 cut(s)	534, 833, 1397
SmiMI	CAYNNNNRTG	1 cut(s)	147
Sse9I	AATT	8 cut(s)	253, 258, 305, 599, 1008, 1128, 1387, 1415
SsiI	CCGC	4 cut(s)	912, 1105, 1198, 1577
SspI	AATATT	1 cut(s)	397
SspMI	CTAG	3 cut(s)	248, 768, 1488
StyD4I	CCNGG	2 cut(s)	221, 436
StyI	CCWWGG	1 cut(s)	538
TaaI	ACNGT	6 cut(s)	146, 478, 503, 574, 1030, 1381
TaqI	TCGA	3 cut(s)	32, 983, 1622
TasI	AATT	8 cut(s)	253, 258, 305, 599, 1008, 1128, 1387, 1415
TfiI	GAWTC	1 cut(s)	543
Tru1I	TTAA	8 cut(s)	41, 603, 1116, 1131, 1221, 1346, 1431, 1587
Tru9I	TTAA	8 cut(s)	41, 603, 1116, 1131, 1221, 1346, 1431, 1587
TscAI	CASTG	3 cut(s)	483, 739, 1236
TseFI	GTSAC	1 cut(s)	654
Tsp45I	GTSAC	1 cut(s)	654
TspDTI	ATGAA	4 cut(s)	279, 312, 1167, 1513
TspGWI	ACGGA	2 cut(s)	142, 982
TspRI	CASTG	3 cut(s)	483, 739, 1236
VpaK11BI	GGWCC	3 cut(s)	534, 833, 1397
VspI	ATTAAT	1 cut(s)	1221
XagI	CCTNNNNNAGG	1 cut(s)	1443
XapI	RAATTY	3 cut(s)	253, 599, 1387
XceI	RCATGY	1 cut(s)	1041
XcmI	CCANNNNNNNNNTGG	1 cut(s)	682
XmnI	GAANNNNTTC	1 cut(s)	364
XspI	CTAG	3 cut(s)	248, 768, 1488
Zsp2I	ATGCAT	1 cut(s)	1081

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.