Rh2BG449300

The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
63439517 .. 63446115
6599 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG449300.1

Sequence Viewer

Length: 1290 bp
ATGCCTTCTCTTTCACCTACTATGTCTGAGGGTAATATTGCTAGGTGGTTGAAGAAAGAGGGTGATAAAGTCTCTCCTGGTGAAGTGCTCTGTGAAGTTGAAACTGATAAAGCTACAGTTGAGATGGAATGCATGGAGGATGGATATCTTGCCAAGATCGTACAAGGAGAAGGGGCACAAGGAATCAAAGTTGGTGAGGTGATTTGCGTAACTGTTGAAGATGAGGAAGATATTGCAAAATTCAAAGATTACACACCATCAGCATCAGGTTCTGGAGGTGATGTAGCTAAAGGGTCATCTGACTCTAGCCCGCCTCCCCCGCCCAAAAAAGAGGCAGTTGAAGCACCAGTTGCTGCTCCCGAGCCAAAGACTTCAAAGCCCAGTGCAGCTCCTCCTTCTGGAGATCGTGTATTTGCTAGTCCTCTTGCAAGAAGTTTGGCTGAGGAACACAAGGTACCCCTCTCAAGTATCAAAGGAACAGGCCCGGATGGAAGCATTGTGAAGGCTGATATTGAAGAGTACTTGGCTTCTGGTGGGAAGCAAGTTTCTGAACCAGCTCCCAAGGCCAAGGGTGCTGCAGCCCCAACACTGGATTACACCGACATCCCTCATACTCAGATACGGAAGGTTACAGCTTCAAGATTATTATTCTCAAAGCAAACTATTCCTCATTATTATTTGACAGTAGATACATGTGTCGACAAGCTCGTTGAGTTGAGAGGCCAGCTCAATTCATTGCAAGAAGCTACAGGTGGGAAGCGGATATCTATCAATGATCTTGTAATAAAGGCTGCTGCTTTGGCTCTTCAAAAGGTTCCTCAGGTCAATAGCTCATGGACAGATGATTGCATCCGCCAGTATCACAATGTGAATGTTAATGTTGCAGTGCAGACAGACAATGGACTATATGTTCCTGTTGTCAGGGATGCGAACAAAAAGGGACTATCCGCTATATCTGAGGAGGTTAAGCTGCTGGCCCAAAAAGCCAAGGAGAACAGCTTAAAGCCAGAAGATTATGAGGGAGGGACATTTACAGTGTCGAATTTGGGAGGTCCATTTGGCATCAAACAATTTTGTGCCATCATTAACCCGCCCCAATCAGGCATTCTGGCAATTGGGTCAGCTGAGAAGAGGGTTGTACCTAGTTCCGGGCCCGAGCAATACAAGTTTGCATCTTTCCTATCTGCAACACTAAGCTGTGATCATCGTGTTATTGACGGTGCAATTGGTGCTGAGTGGCTAAAAGCATTCAAAGGCTACATCGAGAATCCAGAGTCAATGTTGCTCTAA

Protein Analysis

429

Amino Acids

45.61

Weight (kDa)

5.34

Isoelectric Point (pI)

46.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Biotin_lipoyl PF00364 1 - 69 1.3e-16 Biotin-requiring enzyme
E3_binding PF02817 137 - 172 5.3e-15 e3 binding domain
2-oxoacid_dh PF00198 198 - 429 1.2e-79 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 454
AccB1I GGYRCC 1 cut(s) 454
AccI GTMKAC 1 cut(s) 699
AciI CCGC 6 cut(s) 311, 320, 760, 853, 948, 1091
AcsI RAATTY 2 cut(s) 239, 1042
AdeI CACNNNGTG 1 cut(s) 868
AfaI GTAC 4 cut(s) 162, 456, 521, 1140
AfiI CCNNNNNNNGG 4 cut(s) 398, 589, 1100, 1148
AflIII ACRYGT 1 cut(s) 692
AjnI CCWGG 1 cut(s) 76
AjuI GAANNNNNNNTTGG 2 cut(s) 1089, 1121
AloI GAACNNNNNNTCC 2 cut(s) 894, 926
Alw21I GWGCWC 1 cut(s) 90
Alw26I GTCTC 1 cut(s) 76
AlwNI CAGNNNCTG 2 cut(s) 272, 353
Ama87I CYCGRG 2 cut(s) 359, 1154
AoxI GGCC 5 cut(s) 481, 564, 721, 975, 1151
ApaI GGGCCC 1 cut(s) 1155
ApeKI GCWGC 7 cut(s) 353, 386, 575, 578, 791, 794, 970
ApoI RAATTY 2 cut(s) 239, 1042
Asp718I GGTACC 1 cut(s) 454
AspS9I GGNCC 5 cut(s) 482, 976, 1052, 1151, 1152
AsuC2I CCSGG 2 cut(s) 485, 1150
AsuHPI GGTGA 6 cut(s) 6, 74, 92, 206, 211, 290
AvaI CYCGRG 2 cut(s) 359, 1154
AvaII GGWCC 1 cut(s) 1052
AxyI CCTNAGG 1 cut(s) 819
BaeGI GKGCMC 2 cut(s) 178, 1155
BaeI ACNNNNGTAYC 2 cut(s) 681, 714
BanI GGYRCC 1 cut(s) 454
BanII GRGCYC 1 cut(s) 1155
Bbv12I GWGCWC 1 cut(s) 90
BbvCI CCTCAGC 1 cut(s) 441
BbvI GCAGC 7 cut(s) 340, 398, 562, 590, 778, 781, 957
BccI CCATC 5 cut(s) 118, 134, 265, 482, 1088
BciT130I CCWGG 1 cut(s) 78
BclI TGATCA 1 cut(s) 1201
BcnI CCSGG 2 cut(s) 485, 1150
BcoDI GTCTC 1 cut(s) 76
BfaI CTAG 4 cut(s) 42, 306, 417, 1143
BfmI CTRYAG 3 cut(s) 114, 576, 747
BisI GCNGC 7 cut(s) 354, 387, 576, 579, 792, 795, 971
BlsI GCNGC 7 cut(s) 355, 388, 577, 580, 793, 796, 972
BmcAI AGTACT 1 cut(s) 521
Bme1390I CCNGG 3 cut(s) 78, 485, 1150
Bme18I GGWCC 1 cut(s) 1052
BmeT110I CYCGRG 2 cut(s) 359, 1154
BmgT120I GGNCC 5 cut(s) 482, 976, 1052, 1151, 1152
BmiI GGNNCC 3 cut(s) 456, 816, 1153
BmrFI CCNGG 3 cut(s) 78, 485, 1150
BmrI ACTGGG 1 cut(s) 375
BmsI GCATC 5 cut(s) 272, 858, 916, 1071, 1181
BmuI ACTGGG 1 cut(s) 375
BplI GAGNNNNNCTC 2 cut(s) 711, 743
BpmI CTGGAG 2 cut(s) 294, 420
Bpu10I CCTNAGC 1 cut(s) 441
BpuEI CTTGAG 1 cut(s) 448
BpuMI CCSGG 2 cut(s) 485, 1150
BsaBI GATNNNNATC 2 cut(s) 144, 767
BsaJI CCNNGG 3 cut(s) 561, 567, 987
BsaXI ACNNNNNCTCC 4 cut(s) 267, 297, 393, 423
Bsc4I CCNNNNNNNGG 4 cut(s) 398, 589, 1100, 1148
Bse1I ACTGG 4 cut(s) 347, 381, 594, 856
Bse21I CCTNAGG 1 cut(s) 819
Bse3DI GCAATG 1 cut(s) 734
Bse8I GATNNNNATC 2 cut(s) 144, 767
BseBI CCWGG 1 cut(s) 78
BseDI CCNNGG 3 cut(s) 561, 567, 987
BseGI GGATG 5 cut(s) 145, 493, 603, 849, 931
BseJI GATNNNNATC 2 cut(s) 144, 767
BseLI CCNNNNNNNGG 4 cut(s) 398, 589, 1100, 1148
BseMI GCAATG 1 cut(s) 734
BseMII CTCAG 7 cut(s) 18, 432, 629, 833, 948, 1116, 1224
BseNI ACTGG 4 cut(s) 347, 381, 594, 856
BseRI GAGGAG 2 cut(s) 381, 974
BseSI GKGCMC 2 cut(s) 178, 1155
BseXI GCAGC 7 cut(s) 340, 398, 562, 590, 778, 781, 957
BsgI GTGCAG 2 cut(s) 405, 908
BshFI GGCC 5 cut(s) 483, 566, 723, 977, 1153
BshNI GGYRCC 1 cut(s) 454
BsiHKAI GWGCWC 1 cut(s) 90
BsiHKCI CYCGRG 2 cut(s) 359, 1154
BsiSI CCGG 2 cut(s) 485, 1149
BslFI GGGAC 2 cut(s) 954, 1039
BslI CCNNNNNNNGG 4 cut(s) 398, 589, 1100, 1148
BsmAI GTCTC 1 cut(s) 76
BsmFI GGGAC 2 cut(s) 954, 1039
BsmI GAATGC 3 cut(s) 134, 1104, 1247
BsnI GGCC 5 cut(s) 483, 566, 723, 977, 1153
BsoBI CYCGRG 2 cut(s) 359, 1154
Bsp120I GGGCCC 1 cut(s) 1151
Bsp1286I GDGCHC 3 cut(s) 90, 178, 1155
Bsp143I GATC 4 cut(s) 156, 403, 775, 1201
BspACI CCGC 6 cut(s) 311, 320, 760, 853, 948, 1091
BspANI GGCC 5 cut(s) 483, 566, 723, 977, 1153
BspCNI CTCAG 7 cut(s) 19, 433, 628, 832, 949, 1117, 1225
BspLI GGNNCC 3 cut(s) 456, 816, 1153
BspMAI CTGCAG 1 cut(s) 580
BspQI GCTCTTC 1 cut(s) 810
BspT107I GGYRCC 1 cut(s) 454
BsrDI GCAATG 1 cut(s) 734
BsrI ACTGG 4 cut(s) 347, 381, 594, 856
BssECI CCNNGG 3 cut(s) 561, 567, 987
BssMI GATC 4 cut(s) 156, 403, 775, 1201
BssT1I CCWWGG 3 cut(s) 561, 567, 987
Bst2UI CCWGG 1 cut(s) 78
Bst4CI ACNGT 5 cut(s) 118, 214, 685, 1036, 1220
Bst6I CTCTTC 3 cut(s) 510, 810, 1124
BstAPI GCANNNNNTGC 2 cut(s) 350, 1229
BstC8I GCNNGC 3 cut(s) 311, 725, 975
BstDEI CTNAG 8 cut(s) 27, 441, 615, 819, 957, 1125, 1193, 1233
BstF5I GGATG 5 cut(s) 145, 493, 603, 849, 931
BstKTI GATC 4 cut(s) 159, 406, 778, 1204
BstMAI GTCTC 1 cut(s) 76
BstMBI GATC 4 cut(s) 156, 403, 775, 1201
BstMWI GCNNNNNNNGC 8 cut(s) 319, 341, 350, 563, 572, 800, 983, 1229
BstNI CCWGG 1 cut(s) 78
BstNSI RCATGY 1 cut(s) 696
BstSCI CCNGG 3 cut(s) 76, 483, 1148
BstSFI CTRYAG 3 cut(s) 114, 576, 747
BstSLI GKGCMC 2 cut(s) 178, 1155
BstV1I GCAGC 7 cut(s) 340, 398, 562, 590, 778, 781, 957
Bsu36I CCTNAGG 1 cut(s) 819
BsuRI GGCC 5 cut(s) 483, 566, 723, 977, 1153
BtsCI GGATG 5 cut(s) 145, 493, 603, 849, 931
BtsI GCAGTG 1 cut(s) 891
BtsIMutI CAGTG 4 cut(s) 388, 587, 891, 1041
Cac8I GCNNGC 3 cut(s) 311, 725, 975
CaiI CAGNNNCTG 2 cut(s) 272, 353
Cfr13I GGNCC 5 cut(s) 482, 976, 1052, 1151, 1152
Csp6I GTAC 4 cut(s) 161, 455, 520, 1139
CviAII CATG 3 cut(s) 133, 693, 834
CviQI GTAC 4 cut(s) 161, 455, 520, 1139
DdeI CTNAG 8 cut(s) 27, 441, 615, 819, 957, 1125, 1193, 1233
DpnI GATC 4 cut(s) 158, 405, 777, 1203
DpnII GATC 4 cut(s) 156, 403, 775, 1201
DraIII CACNNNGTG 1 cut(s) 868
Eam1104I CTCTTC 3 cut(s) 510, 810, 1124
EarI CTCTTC 3 cut(s) 510, 810, 1124
EciI GGCGGA 1 cut(s) 842
Eco130I CCWWGG 3 cut(s) 561, 567, 987
Eco24I GRGCYC 1 cut(s) 1155
Eco32I GATATC 2 cut(s) 146, 765
Eco47I GGWCC 1 cut(s) 1052
Eco81I CCTNAGG 1 cut(s) 819
Eco88I CYCGRG 2 cut(s) 359, 1154
EcoRII CCWGG 1 cut(s) 76
EcoRV GATATC 2 cut(s) 146, 765
EcoT14I CCWWGG 3 cut(s) 561, 567, 987
EcoT22I ATGCAT 1 cut(s) 134
EcoT38I GRGCYC 1 cut(s) 1155
ErhI CCWWGG 3 cut(s) 561, 567, 987
FaeI CATG 3 cut(s) 136, 696, 837
FaiI YATR 9 cut(s) 23, 134, 612, 694, 835, 907, 909, 953, 1017
FaqI GGGAC 2 cut(s) 954, 1039
FatI CATG 3 cut(s) 132, 692, 833
FauI CCCGC 3 cut(s) 318, 327, 1098
FbaI TGATCA 1 cut(s) 1201
FblI GTMKAC 1 cut(s) 699
Fnu4HI GCNGC 7 cut(s) 354, 387, 576, 579, 792, 795, 971
FokI GGATG 5 cut(s) 152, 500, 590, 836, 938
FriOI GRGCYC 1 cut(s) 1155
Fsp4HI GCNGC 7 cut(s) 354, 387, 576, 579, 792, 795, 971
FspBI CTAG 4 cut(s) 42, 306, 417, 1143
GluI GCNGC 7 cut(s) 354, 387, 576, 579, 792, 795, 971
GsuI CTGGAG 2 cut(s) 294, 420
HaeIII GGCC 5 cut(s) 483, 566, 723, 977, 1153
HapII CCGG 2 cut(s) 485, 1149
Hin1II CATG 3 cut(s) 136, 696, 837
HincII GTYRAC 1 cut(s) 700
HindII GTYRAC 1 cut(s) 700
HinfI GANTC 4 cut(s) 183, 302, 1267, 1274
HpaII CCGG 2 cut(s) 485, 1149
HphI GGTGA 6 cut(s) 6, 74, 92, 206, 211, 290
Hpy166II GTNNAC 1 cut(s) 700
Hpy188I TCNGA 5 cut(s) 28, 301, 550, 618, 958
Hpy188III TCNNGA 6 cut(s) 273, 359, 399, 639, 1264, 1271
Hpy8I GTNNAC 1 cut(s) 700
HpyAV CCTTC 5 cut(s) 15, 164, 405, 496, 619
HpyCH4III ACNGT 5 cut(s) 118, 214, 685, 1036, 1220
HpyF10VI GCNNNNNNNGC 8 cut(s) 319, 341, 350, 563, 572, 800, 983, 1229
HpyF3I CTNAG 8 cut(s) 27, 441, 615, 819, 957, 1125, 1193, 1233
Hsp92II CATG 3 cut(s) 136, 696, 837
KpnI GGTACC 1 cut(s) 458
Ksp22I TGATCA 1 cut(s) 1201
Kzo9I GATC 4 cut(s) 156, 403, 775, 1201
LguI GCTCTTC 1 cut(s) 810
LmnI GCTCC 3 cut(s) 361, 394, 562
Lsp1109I GCAGC 7 cut(s) 340, 398, 562, 590, 778, 781, 957
LweI GCATC 5 cut(s) 272, 858, 916, 1071, 1181
MaeI CTAG 4 cut(s) 42, 306, 417, 1143
MaeIII GTNAC 2 cut(s) 208, 628
MalI GATC 4 cut(s) 158, 405, 777, 1203
MboI GATC 4 cut(s) 156, 403, 775, 1201
MboII GAAGA 7 cut(s) 64, 230, 239, 527, 797, 1022, 1141
MfeI CAATTG 2 cut(s) 1113, 1224
MhlI GDGCHC 3 cut(s) 90, 178, 1155
MluCI AATT 6 cut(s) 239, 730, 1042, 1070, 1113, 1224
MlyI GAGTC 2 cut(s) 296, 1283
Mph1103I ATGCAT 1 cut(s) 134
MseI TTAA 4 cut(s) 876, 966, 1001, 1086
MspA1I CMGCKG 1 cut(s) 1124
MspI CCGG 2 cut(s) 485, 1149
MspR9I CCNGG 3 cut(s) 78, 485, 1150
MunI CAATTG 2 cut(s) 1113, 1224
Mva1269I GAATGC 3 cut(s) 134, 1104, 1247
MvaI CCWGG 1 cut(s) 78
MwoI GCNNNNNNNGC 8 cut(s) 319, 341, 350, 563, 572, 800, 983, 1229
NciI CCSGG 2 cut(s) 485, 1150
NdeII GATC 4 cut(s) 156, 403, 775, 1201
NlaIII CATG 3 cut(s) 136, 696, 837
NlaIV GGNNCC 3 cut(s) 456, 816, 1153
NsiI ATGCAT 1 cut(s) 134
NspI RCATGY 1 cut(s) 696
PciI ACATGT 1 cut(s) 692
PciSI GCTCTTC 1 cut(s) 810
PcsI WCGNNNNNNNCGW 1 cut(s) 705
PctI GAATGC 3 cut(s) 134, 1104, 1247
PfeI GAWTC 2 cut(s) 183, 1267
PkrI GCNGC 7 cut(s) 355, 388, 577, 580, 793, 796, 972
PleI GAGTC 2 cut(s) 296, 1282
PpsI GAGTC 2 cut(s) 296, 1282
PscI ACATGT 1 cut(s) 692
Psp6I CCWGG 1 cut(s) 76
PspGI CCWGG 1 cut(s) 76
PspN4I GGNNCC 3 cut(s) 456, 816, 1153
PspOMI GGGCCC 1 cut(s) 1151
PspPI GGNCC 5 cut(s) 482, 976, 1052, 1151, 1152
PsrI GAACNNNNNNTAC 2 cut(s) 438, 470
PstI CTGCAG 1 cut(s) 580
PstNI CAGNNNCTG 2 cut(s) 272, 353
PvuII CAGCTG 1 cut(s) 1124
RsaI GTAC 4 cut(s) 162, 456, 521, 1140
RsaNI GTAC 4 cut(s) 161, 455, 520, 1139
SalI GTCGAC 1 cut(s) 698
SapI GCTCTTC 1 cut(s) 810
SaqAI TTAA 4 cut(s) 876, 966, 1001, 1086
SatI GCNGC 7 cut(s) 354, 387, 576, 579, 792, 795, 971
Sau3AI GATC 4 cut(s) 156, 403, 775, 1201
Sau96I GGNCC 5 cut(s) 482, 976, 1052, 1151, 1152
ScaI AGTACT 1 cut(s) 521
SchI GAGTC 2 cut(s) 296, 1283
ScrFI CCNGG 3 cut(s) 78, 485, 1150
SduI GDGCHC 3 cut(s) 90, 178, 1155
SfaNI GCATC 5 cut(s) 272, 858, 916, 1071, 1181
SfcI CTRYAG 3 cut(s) 114, 576, 747
SinI GGWCC 1 cut(s) 1052
SmlI CTYRAG 1 cut(s) 463
SmoI CTYRAG 1 cut(s) 463
Sse9I AATT 6 cut(s) 239, 730, 1042, 1070, 1113, 1224
SsiI CCGC 6 cut(s) 311, 320, 760, 853, 948, 1091
SspI AATATT 1 cut(s) 37
SspMI CTAG 4 cut(s) 42, 306, 417, 1143
StyD4I CCNGG 3 cut(s) 76, 483, 1148
StyI CCWWGG 3 cut(s) 561, 567, 987
TaaI ACNGT 5 cut(s) 118, 214, 685, 1036, 1220
TaqI TCGA 3 cut(s) 699, 1040, 1263
TasI AATT 6 cut(s) 239, 730, 1042, 1070, 1113, 1224
TatI WGTACW 1 cut(s) 519
TfiI GAWTC 2 cut(s) 183, 1267
Tru1I TTAA 4 cut(s) 876, 966, 1001, 1086
Tru9I TTAA 4 cut(s) 876, 966, 1001, 1086
TscAI CASTG 4 cut(s) 388, 594, 891, 1041
TseI GCWGC 7 cut(s) 353, 386, 575, 578, 791, 794, 970
TspDTI ATGAA 1 cut(s) 723
TspGWI ACGGA 1 cut(s) 637
TspRI CASTG 4 cut(s) 388, 594, 891, 1041
VpaK11BI GGWCC 1 cut(s) 1052
XapI RAATTY 2 cut(s) 239, 1042
XceI RCATGY 1 cut(s) 696
XmiI GTMKAC 1 cut(s) 699
XspI CTAG 4 cut(s) 42, 306, 417, 1143
ZrmI AGTACT 1 cut(s) 521
Zsp2I ATGCAT 1 cut(s) 134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.