Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0008560

Physical Location & Seq

Genomic Coordinates Reverse (-)

8634123 .. 8639425

Gene Structure 5303 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g10560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGACTTACGCATCTCGTATCATCCACCATTCGAAAAGGTTACAGAATGCCCCCAACTTAGTACGGCAAGAGCAAGCACTCTTGGTTCGTTGGTTTTCACATGATGCTCAACCCTCAACTGATATCCTGAAGGCTCGTCACCCCAGTTATGTGCCTTCAGAAAGAGCAAGAGGTTCTAGGTCTTTCAGCAGTAGCACTAAATCAGTGTCTGGTACATTTACCAGGGATATCTCAATGATAAGGAAACTAGGAACTTCAGTTTCTGAATCGGGATTCAACAAATTGCTTTCATGTGTGCAGGTGCAATTGAGCAGAGGCTTTTCATCTGATGCTGGCCTTCCTCCACACCAAGAAATTGGAATGCCTTCTCTTTCACCCACTATGTCTGAGGGTAATATTGCTAGGTGGCTGAAGAAAGAGGGTGACAAAGTTTCTCCTGGTGAAGTTCTTTGTGAAGTTGAAACTGATAAAGCTACAGTGGAGATGGAATGCATGGAAGATGGTTATCTTGCCAAGATTGTACGACCAGATGGGACCCAAGGGATCAAAGTTGGAGAGGTGATTGCAATTACCGTTGAAGAGGAGGATGATATTGCAAAATTTAAAGATTACACACCATCGGCATCTGGTGCCAGTGCTTCTGCAGCTAAAGAGTCATCTGAGCCTACTCCGCCCAAAAAAGAGGTGGTTGCAGAACCAGTTACTTCCCCAGAGCCAAAAGTATCAAAGCCCAGTGCAGCTCCTGTTGCTTCCCCTTCTGGAGATCGCATATTTGCAAGTCCTCTGGCAAGAAGTTTGGCCGAAGAGCACAAGGTTCCCCTCTCAAGTATCAAAGGAACAGGTCCTGATGGAAGCATTGTGAAGGCTGATGTTGAAGAGTATTTGGCTTCTCGTGGGAAGGAAGCCCCTAAAGCTAAGGGTGCAGCACCTGCAGCGTTGGATTACACCGATATCCCCCATTCTCAGATACGGAAGATCACAGCTTCGAGATTATTATTTTCAAAGCAAACAATTCCTCATTATTATTTGACAGTAGATACATGTGTTGATAGACTCATGGATTTGAGAGGCCAACTCAATGCATTACAAGAGGCATCAGGTGGGAAGCGGATATCTGCTGCTGCTTTGGCTCTTCAAAAGGTTCCTCAATGCAATAGTTCATGGACAGATGATTACATCCGCCAGTTTCACAACGTTAACATTAATGTTGCGGTGCAGACAGAAAATGGACTCTTTGTACCCGTCATTAGGGATGCGAACAAGAAGGGACTATCCAGCATAGCTGAGGAGGTCAGGCAGCTGGCCCAAAAGGCTAAAGAAAACAGCTTAAAGCCAGAAGATTACGAGGGAGGCACATTTACTGTGACCAATTTGGGAGGTCCATTCGGCATCAAACAATTCTGTGCCATTATTAACCCTCCTCAGTCAGGCATTCTTGCAGTTGGATCAGCTGAGAAGAGGGTTGTACCTAGTTCCGGGCCCGAGCTATACAAGTTTGCTTCCTACATGTCTGTAACACTAAGCTGTGATCATCGTGTTATCGATGGTGCAATTGGTGCGGAATGGCTGAAGGCGTTCAAAGGCTACATTGAGAAGCCCGAGTCAATGCTGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

2-oxoacid_dh Biotin_lipoyl E3_binding

Protein Analysis

539

Amino Acids

58.14

Weight (kDa)

8.02

Isoelectric Point (pI)

52.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Biotin_lipoyl	PF00364	118 - 189	1.7e-18	Biotin-requiring enzyme
E3_binding	PF02817	257 - 292	3.1e-15	e3 binding domain
2-oxoacid_dh	PF00198	314 - 538	1.1e-71	2-oxoacid dehydrogenases acyltransferase (catalytic domain)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008560)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54220 AT1G54220 AT3G13930
fragaria_vesca	FvH4_6g34140 FvH4_6g34140 FvH4_6g34140
malus_domestica	MD09G1188500.v1.1 MD17G1172600.v1.1
prunus_persica	Prupe.3G045200_v2.0.a1 Prupe.3G045200_v2.0.a1
pyrus_communis	pycom09g10560 pycom17g17050
rosa_chinensis	RchiOBHm_Chr2g0144451
rosa_laevigata	RLG00000020082
rosa_multiflora	Rmu_sc0003475.1_g000006
rosa_roxburghii	Rroxscaffold_2G00101300
rosa_rugosa	Rorug02G0386700 Rorug02G0386800
rosa_samantha	Rh2AG439000 Rh2BG449300 Rh2CG426100 Rh2DG459100
rosa_wichuraiana	Rw2G035920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	289, 937
Acc36I	ACCTGC	2 cut(s)	289, 937
AccB1I	GGYRCC	1 cut(s)	629
AciI	CCGC	5 cut(s)	671, 1108, 1180, 1211, 1559
AclI	AACGTT	1 cut(s)	1194
AclWI	GGATC	2 cut(s)	551, 1453
AcoI	YGGCCR	1 cut(s)	798
AcsI	RAATTY	1 cut(s)	599
AcuI	CTGAAG	5 cut(s)	141, 149, 240, 431, 1589
AfaI	GTAC	5 cut(s)	63, 214, 522, 1239, 1467
AfiI	CCNNNNNNNGG	3 cut(s)	1248, 1427, 1475
AflIII	ACRYGT	2 cut(s)	1040, 1506
AgsI	TTSAA	7 cut(s)	277, 461, 578, 875, 1002, 1136, 1579
AjnI	CCWGG	2 cut(s)	221, 436
Alw21I	GWGCWC	1 cut(s)	810
AlwI	GGATC	2 cut(s)	551, 1453
AlwNI	CAGNNNCTG	5 cut(s)	209, 263, 743, 845, 929
Ama87I	CYCGRG	2 cut(s)	1481, 1598
AoxI	GGCC	5 cut(s)	334, 798, 1069, 1302, 1478
ApaI	GGGCCC	1 cut(s)	1482
ApeKI	GCWGC	8 cut(s)	644, 737, 923, 932, 1118, 1121, 1297, 1609
ApoI	RAATTY	1 cut(s)	599
AseI	ATTAAT	1 cut(s)	1203
Asp700I	GAANNNNTTC	2 cut(s)	364, 1574
AspS9I	GGNCC	6 cut(s)	534, 842, 1303, 1379, 1478, 1479
AsuC2I	CCSGG	1 cut(s)	1477
AsuHPI	GGTGA	5 cut(s)	131, 366, 434, 452, 571
AsuII	TTCGAA	1 cut(s)	32
AvaI	CYCGRG	2 cut(s)	1481, 1598
AvaII	GGWCC	3 cut(s)	534, 842, 1379
BaeGI	GKGCMC	1 cut(s)	1482
BaeI	ACNNNNGTAYC	2 cut(s)	1029, 1062
BanI	GGYRCC	1 cut(s)	629
BanII	GRGCYC	1 cut(s)	1482
BauI	CACGAG	1 cut(s)	891
Bbv12I	GWGCWC	1 cut(s)	810
BbvCI	CCTCAGC	1 cut(s)	1284
BbvI	GCAGC	8 cut(s)	656, 749, 935, 944, 1105, 1108, 1309, 1596
BccI	CCATC	6 cut(s)	478, 494, 524, 625, 842, 1538
BceAI	ACGGC	1 cut(s)	80
BciT130I	CCWGG	2 cut(s)	223, 438
BclI	TGATCA	1 cut(s)	1528
BcnI	CCSGG	1 cut(s)	1477
BfaI	CTAG	4 cut(s)	177, 248, 402, 1470
BfmI	CTRYAG	3 cut(s)	474, 642, 930
BfuAI	ACCTGC	2 cut(s)	289, 937
BglI	GCCNNNNNGGC	1 cut(s)	1310
BisI	GCNGC	8 cut(s)	645, 738, 924, 933, 1119, 1122, 1298, 1610
BlsI	GCNGC	8 cut(s)	646, 739, 925, 934, 1120, 1123, 1299, 1611
Bme1390I	CCNGG	3 cut(s)	223, 438, 1477
Bme18I	GGWCC	3 cut(s)	534, 842, 1379
BmeT110I	CYCGRG	2 cut(s)	1481, 1598
BmgT120I	GGNCC	6 cut(s)	534, 842, 1303, 1379, 1478, 1479
BmiI	GGNNCC	6 cut(s)	535, 536, 631, 816, 1143, 1480
BmrFI	CCNGG	3 cut(s)	223, 438, 1477
BmrI	ACTGGG	2 cut(s)	138, 726
BmsI	GCATC	7 cut(s)	20, 94, 319, 632, 1103, 1243, 1398
BmuI	ACTGGG	2 cut(s)	138, 726
BplI	GAGNNNNNCTC	2 cut(s)	1059, 1091
BpmI	CTGGAG	1 cut(s)	780
Bpu10I	CCTNAGC	2 cut(s)	915, 1284
Bpu14I	TTCGAA	1 cut(s)	32
BpuEI	CTTGAG	1 cut(s)	808
BpuMI	CCSGG	1 cut(s)	1477
Bsa29I	ATCGAT	1 cut(s)	1542
BsaBI	GATNNNNATC	1 cut(s)	504
BsaJI	CCNNGG	2 cut(s)	222, 538
Bsc4I	CCNNNNNNNGG	3 cut(s)	1248, 1427, 1475
Bse1I	ACTGG	5 cut(s)	144, 633, 698, 732, 1183
Bse8I	GATNNNNATC	1 cut(s)	504
BseBI	CCWGG	2 cut(s)	223, 438
BseCI	ATCGAT	1 cut(s)	1542
BseDI	CCNNGG	2 cut(s)	222, 538
BseGI	GGATG	4 cut(s)	21, 592, 1176, 1258
BseJI	GATNNNNATC	1 cut(s)	504
BseLI	CCNNNNNNNGG	3 cut(s)	1248, 1427, 1475
BseMII	CTCAG	6 cut(s)	378, 651, 977, 1275, 1436, 1443
BseNI	ACTGG	5 cut(s)	144, 633, 698, 732, 1183
BseRI	GAGGAG	3 cut(s)	596, 1301, 1410
BseSI	GKGCMC	1 cut(s)	1482
BseXI	GCAGC	8 cut(s)	656, 749, 935, 944, 1105, 1108, 1309, 1596
BsgI	GTGCAG	4 cut(s)	317, 756, 942, 1235
BshFI	GGCC	5 cut(s)	336, 800, 1071, 1304, 1480
BshNI	GGYRCC	1 cut(s)	629
BshVI	ATCGAT	1 cut(s)	1542
BsiHKAI	GWGCWC	1 cut(s)	810
BsiHKCI	CYCGRG	2 cut(s)	1481, 1598
BsiSI	CCGG	1 cut(s)	1476
BslFI	GGGAC	2 cut(s)	547, 1281
BslI	CCNNNNNNNGG	3 cut(s)	1248, 1427, 1475
BsmFI	GGGAC	2 cut(s)	547, 1281
BsmI	GAATGC	4 cut(s)	52, 366, 494, 1431
BsnI	GGCC	5 cut(s)	336, 800, 1071, 1304, 1480
BsoBI	CYCGRG	2 cut(s)	1481, 1598
Bsp119I	TTCGAA	1 cut(s)	32
Bsp120I	GGGCCC	1 cut(s)	1478
Bsp1286I	GDGCHC	2 cut(s)	810, 1482
Bsp143I	GATC	5 cut(s)	543, 763, 975, 1445, 1528
BspACI	CCGC	5 cut(s)	671, 1108, 1180, 1211, 1559
BspANI	GGCC	5 cut(s)	336, 800, 1071, 1304, 1480
BspCNI	CTCAG	6 cut(s)	379, 652, 976, 1276, 1435, 1444
BspDI	ATCGAT	1 cut(s)	1542
BspLI	GGNNCC	6 cut(s)	535, 536, 631, 816, 1143, 1480
BspMAI	CTGCAG	2 cut(s)	646, 934
BspMI	ACCTGC	2 cut(s)	289, 937
BspPI	GGATC	2 cut(s)	551, 1453
BspQI	GCTCTTC	2 cut(s)	798, 1137
BspT104I	TTCGAA	1 cut(s)	32
BspT107I	GGYRCC	1 cut(s)	629
BsrI	ACTGG	5 cut(s)	144, 633, 698, 732, 1183
BssECI	CCNNGG	2 cut(s)	222, 538
BssMI	GATC	5 cut(s)	543, 763, 975, 1445, 1528
BssSI	CACGAG	1 cut(s)	891
BssT1I	CCWWGG	1 cut(s)	538
Bst2BI	CACGAG	1 cut(s)	891
Bst2UI	CCWGG	2 cut(s)	223, 438
Bst4CI	ACNGT	4 cut(s)	478, 574, 1033, 1363
Bst6I	CTCTTC	5 cut(s)	573, 798, 870, 1137, 1451
BstAPI	GCANNNNNTGC	3 cut(s)	629, 929, 1556
BstBI	TTCGAA	1 cut(s)	32
BstC8I	GCNNGC	3 cut(s)	75, 334, 1302
BstDEI	CTNAG	9 cut(s)	58, 387, 660, 915, 963, 1284, 1422, 1452, 1520
BstENI	CCTNNNNNAGG	1 cut(s)	1425
BstF5I	GGATG	4 cut(s)	21, 592, 1176, 1258
BstKTI	GATC	5 cut(s)	546, 766, 978, 1448, 1531
BstMBI	GATC	5 cut(s)	543, 763, 975, 1445, 1528
BstNI	CCWGG	2 cut(s)	223, 438
BstNSI	RCATGY	2 cut(s)	1044, 1510
BstSCI	CCNGG	3 cut(s)	221, 436, 1475
BstSFI	CTRYAG	3 cut(s)	474, 642, 930
BstSLI	GKGCMC	1 cut(s)	1482
BstV1I	GCAGC	8 cut(s)	656, 749, 935, 944, 1105, 1108, 1309, 1596
BstXI	CCANNNNNNTGG	1 cut(s)	356
Bsu15I	ATCGAT	1 cut(s)	1542
BsuRI	GGCC	5 cut(s)	336, 800, 1071, 1304, 1480
BsuTUI	ATCGAT	1 cut(s)	1542
BtsCI	GGATG	4 cut(s)	21, 592, 1176, 1258
BtsIMutI	CAGTG	4 cut(s)	210, 483, 640, 739
BveI	ACCTGC	2 cut(s)	289, 937
Cac8I	GCNNGC	3 cut(s)	75, 334, 1302
CaiI	CAGNNNCTG	5 cut(s)	209, 263, 743, 845, 929
Cfr13I	GGNCC	6 cut(s)	534, 842, 1303, 1379, 1478, 1479
ClaI	ATCGAT	1 cut(s)	1542
Csp6I	GTAC	5 cut(s)	62, 213, 521, 1238, 1466
CviAII	CATG	7 cut(s)	101, 291, 493, 1041, 1057, 1161, 1507
CviQI	GTAC	5 cut(s)	62, 213, 521, 1238, 1466
DdeI	CTNAG	9 cut(s)	58, 387, 660, 915, 963, 1284, 1422, 1452, 1520
DpnI	GATC	5 cut(s)	545, 765, 977, 1447, 1530
DpnII	GATC	5 cut(s)	543, 763, 975, 1445, 1528
DraI	TTTAAA	1 cut(s)	604
EaeI	YGGCCR	1 cut(s)	798
Eam1104I	CTCTTC	5 cut(s)	573, 798, 870, 1137, 1451
EarI	CTCTTC	5 cut(s)	573, 798, 870, 1137, 1451
EciI	GGCGGA	2 cut(s)	660, 1169
Eco130I	CCWWGG	1 cut(s)	538
Eco24I	GRGCYC	1 cut(s)	1482
Eco32I	GATATC	4 cut(s)	124, 229, 952, 1113
Eco47I	GGWCC	3 cut(s)	534, 842, 1379
Eco57I	CTGAAG	5 cut(s)	141, 149, 240, 431, 1589
Eco88I	CYCGRG	2 cut(s)	1481, 1598
EcoNI	CCTNNNNNAGG	1 cut(s)	1425
EcoO109I	RGGNCCY	2 cut(s)	534, 842
EcoRII	CCWGG	2 cut(s)	221, 436
EcoRV	GATATC	4 cut(s)	124, 229, 952, 1113
EcoT14I	CCWWGG	1 cut(s)	538
EcoT22I	ATGCAT	2 cut(s)	494, 1084
EcoT38I	GRGCYC	1 cut(s)	1482
ErhI	CCWWGG	1 cut(s)	538
FaeI	CATG	7 cut(s)	104, 294, 496, 1044, 1060, 1164, 1510
FaqI	GGGAC	2 cut(s)	547, 1281
FatI	CATG	7 cut(s)	100, 290, 492, 1040, 1056, 1160, 1506
FbaI	TGATCA	1 cut(s)	1528
Fnu4HI	GCNGC	8 cut(s)	645, 738, 924, 933, 1119, 1122, 1298, 1610
FokI	GGATG	4 cut(s)	8, 599, 1163, 1265
FriOI	GRGCYC	1 cut(s)	1482
Fsp4HI	GCNGC	8 cut(s)	645, 738, 924, 933, 1119, 1122, 1298, 1610
FspBI	CTAG	4 cut(s)	177, 248, 402, 1470
GluI	GCNGC	8 cut(s)	645, 738, 924, 933, 1119, 1122, 1298, 1610
GsuI	CTGGAG	1 cut(s)	780
HaeIII	GGCC	5 cut(s)	336, 800, 1071, 1304, 1480
HapII	CCGG	1 cut(s)	1476
Hin1II	CATG	7 cut(s)	104, 294, 496, 1044, 1060, 1164, 1510
HincII	GTYRAC	1 cut(s)	1198
HindII	GTYRAC	1 cut(s)	1198
HinfI	GANTC	6 cut(s)	266, 273, 653, 1053, 1230, 1601
HpaI	GTTAAC	1 cut(s)	1198
HpaII	CCGG	1 cut(s)	1476
HphI	GGTGA	5 cut(s)	131, 366, 434, 452, 571
Hpy166II	GTNNAC	1 cut(s)	1198
Hpy188I	TCNGA	6 cut(s)	160, 265, 328, 388, 661, 966
Hpy188III	TCNNGA	5 cut(s)	127, 270, 759, 845, 987
Hpy8I	GTNNAC	1 cut(s)	1198
HpyAV	CCTTC	9 cut(s)	124, 165, 347, 375, 765, 856, 892, 1258, 1564
HpyCH4III	ACNGT	4 cut(s)	478, 574, 1033, 1363
HpyCH4IV	ACGT	1 cut(s)	1194
HpyF3I	CTNAG	9 cut(s)	58, 387, 660, 915, 963, 1284, 1422, 1452, 1520
HpySE526I	ACGT	1 cut(s)	1194
Hsp92II	CATG	7 cut(s)	104, 294, 496, 1044, 1060, 1164, 1510
KflI	GGGWCCC	1 cut(s)	534
Ksp22I	TGATCA	1 cut(s)	1528
KspAI	GTTAAC	1 cut(s)	1198
Kzo9I	GATC	5 cut(s)	543, 763, 975, 1445, 1528
LguI	GCTCTTC	2 cut(s)	798, 1137
LmnI	GCTCC	1 cut(s)	745
Lsp1109I	GCAGC	8 cut(s)	656, 749, 935, 944, 1105, 1108, 1309, 1596
LweI	GCATC	7 cut(s)	20, 94, 319, 632, 1103, 1243, 1398
MaeI	CTAG	4 cut(s)	177, 248, 402, 1470
MaeII	ACGT	1 cut(s)	1194
MaeIII	GTNAC	6 cut(s)	39, 137, 422, 700, 1363, 1513
MalI	GATC	5 cut(s)	545, 765, 977, 1447, 1530
MboI	GATC	5 cut(s)	543, 763, 975, 1445, 1528
MboII	GAAGA	9 cut(s)	424, 509, 590, 815, 887, 985, 1124, 1349, 1468
MfeI	CAATTG	2 cut(s)	305, 1551
MhlI	GDGCHC	2 cut(s)	810, 1482
MluCI	AATT	9 cut(s)	281, 305, 354, 567, 599, 1011, 1369, 1397, 1551
MlyI	GAGTC	4 cut(s)	662, 1047, 1224, 1610
MmeI	TCCRAC	3 cut(s)	532, 918, 1423
Mph1103I	ATGCAT	2 cut(s)	494, 1084
MroXI	GAANNNNTTC	2 cut(s)	364, 1574
MseI	TTAA	5 cut(s)	603, 1197, 1203, 1328, 1413
MspA1I	CMGCKG	2 cut(s)	1300, 1451
MspI	CCGG	1 cut(s)	1476
MspR9I	CCNGG	3 cut(s)	223, 438, 1477
MunI	CAATTG	2 cut(s)	305, 1551
Mva1269I	GAATGC	4 cut(s)	52, 366, 494, 1431
MvaI	CCWGG	2 cut(s)	223, 438
NciI	CCSGG	1 cut(s)	1477
NdeII	GATC	5 cut(s)	543, 763, 975, 1445, 1528
NlaIII	CATG	7 cut(s)	104, 294, 496, 1044, 1060, 1164, 1510
NlaIV	GGNNCC	6 cut(s)	535, 536, 631, 816, 1143, 1480
NmuCI	GTSAC	3 cut(s)	137, 422, 1363
NsiI	ATGCAT	2 cut(s)	494, 1084
NspI	RCATGY	2 cut(s)	1044, 1510
NspV	TTCGAA	1 cut(s)	32
PaqCI	CACCTGC	2 cut(s)	289, 937
PciI	ACATGT	2 cut(s)	1040, 1506
PciSI	GCTCTTC	2 cut(s)	798, 1137
PctI	GAATGC	4 cut(s)	52, 366, 494, 1431
PdmI	GAANNNNTTC	2 cut(s)	364, 1574
PfeI	GAWTC	2 cut(s)	266, 273
PkrI	GCNGC	8 cut(s)	646, 739, 925, 934, 1120, 1123, 1299, 1611
PleI	GAGTC	4 cut(s)	661, 1047, 1224, 1609
PpsI	GAGTC	4 cut(s)	661, 1047, 1224, 1609
PpuMI	RGGWCCY	2 cut(s)	534, 842
PscI	ACATGT	2 cut(s)	1040, 1506
PshBI	ATTAAT	1 cut(s)	1203
Psp1406I	AACGTT	1 cut(s)	1194
Psp5II	RGGWCCY	2 cut(s)	534, 842
Psp6I	CCWGG	2 cut(s)	221, 436
PspGI	CCWGG	2 cut(s)	221, 436
PspN4I	GGNNCC	6 cut(s)	535, 536, 631, 816, 1143, 1480
PspOMI	GGGCCC	1 cut(s)	1478
PspPI	GGNCC	6 cut(s)	534, 842, 1303, 1379, 1478, 1479
PspPPI	RGGWCCY	2 cut(s)	534, 842
PstI	CTGCAG	2 cut(s)	646, 934
PstNI	CAGNNNCTG	5 cut(s)	209, 263, 743, 845, 929
PvuII	CAGCTG	2 cut(s)	1300, 1451
RsaI	GTAC	5 cut(s)	63, 214, 522, 1239, 1467
RsaNI	GTAC	5 cut(s)	62, 213, 521, 1238, 1466
SapI	GCTCTTC	2 cut(s)	798, 1137
SaqAI	TTAA	5 cut(s)	603, 1197, 1203, 1328, 1413
SatI	GCNGC	8 cut(s)	645, 738, 924, 933, 1119, 1122, 1298, 1610
Sau3AI	GATC	5 cut(s)	543, 763, 975, 1445, 1528
Sau96I	GGNCC	6 cut(s)	534, 842, 1303, 1379, 1478, 1479
SchI	GAGTC	4 cut(s)	662, 1047, 1224, 1610
ScrFI	CCNGG	3 cut(s)	223, 438, 1477
SduI	GDGCHC	2 cut(s)	810, 1482
SfaNI	GCATC	7 cut(s)	20, 94, 319, 632, 1103, 1243, 1398
SfcI	CTRYAG	3 cut(s)	474, 642, 930
SfuI	TTCGAA	1 cut(s)	32
SinI	GGWCC	3 cut(s)	534, 842, 1379
SmlI	CTYRAG	1 cut(s)	823
SmoI	CTYRAG	1 cut(s)	823
Sse9I	AATT	9 cut(s)	281, 305, 354, 567, 599, 1011, 1369, 1397, 1551
SsiI	CCGC	5 cut(s)	671, 1108, 1180, 1211, 1559
SspI	AATATT	1 cut(s)	397
SspMI	CTAG	4 cut(s)	177, 248, 402, 1470
StyD4I	CCNGG	3 cut(s)	221, 436, 1475
StyI	CCWWGG	1 cut(s)	538
TaaI	ACNGT	4 cut(s)	478, 574, 1033, 1363
TaiI	ACGT	1 cut(s)	1197
TaqI	TCGA	3 cut(s)	32, 986, 1542
TasI	AATT	9 cut(s)	281, 305, 354, 567, 599, 1011, 1369, 1397, 1551
TfiI	GAWTC	2 cut(s)	266, 273
Tru1I	TTAA	5 cut(s)	603, 1197, 1203, 1328, 1413
Tru9I	TTAA	5 cut(s)	603, 1197, 1203, 1328, 1413
TscAI	CASTG	4 cut(s)	210, 483, 640, 739
TseFI	GTSAC	3 cut(s)	137, 422, 1363
TseI	GCWGC	8 cut(s)	644, 737, 923, 932, 1118, 1121, 1297, 1609
Tsp45I	GTSAC	3 cut(s)	137, 422, 1363
TspDTI	ATGAA	3 cut(s)	279, 312, 1149
TspGWI	ACGGA	1 cut(s)	985
TspRI	CASTG	4 cut(s)	210, 483, 640, 739
VpaK11BI	GGWCC	3 cut(s)	534, 842, 1379
VspI	ATTAAT	1 cut(s)	1203
XagI	CCTNNNNNAGG	1 cut(s)	1425
XapI	RAATTY	1 cut(s)	599
XceI	RCATGY	2 cut(s)	1044, 1510
XcmI	CCANNNNNNNNNTGG	1 cut(s)	682
XmnI	GAANNNNTTC	2 cut(s)	364, 1574
XspI	CTAG	4 cut(s)	177, 248, 402, 1470
Zsp2I	ATGCAT	2 cut(s)	494, 1084

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.