Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0008604

Physical Location & Seq

Genomic Coordinates Reverse (-)

4179677 .. 4186244

Gene Structure 6568 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G059100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGCTTCATACAGGCCTTTCCCGCCCCAATCGTCATTCGGGCCGCCGCCGAATCAAAACCCTCTTACACCAACACCACCGCCACCTCCTTCACAGAGAGGCAATCAATATAATCAGAATTGGGGATATAATGCTAGTAGTGGTGGTGGTGGTGGTGGTGATGGGGCTGTGCCTGCAGCTTCTTCTTCGTATCCTCAAAACTACAATTACAATCATGGTAATTACGGCCCTCCAAGAACTCAACACCCTCACCCTCCCCCACAATATAATTATCCACCACCGCCTCCGCCGCCCGAGTCTTCATACCCACCACCTCCGCCCCCTCAAGCTCCTCCAGTGGCACAAAATAAAATGCCTTTACAGCCTCCACAAGCCCCCATGTACTACCAGAATTCTCAGTATTCACAATATAGTCACCAGCCAATCCAGCCTTTACAGCAGCCGCCACCTCCACCCCCACCACCTTTTTCCCCGAGTTCCTCTGTCCCACCACCACCCCCACCCCCGGGTTCACCGCCACCACCCCCTCCACAAAGTAAGGATGGTGGGGTAGATAGAGGATCCCATGAAAAAGGGGCTCCCAGGGATGTGTCGGTGTCGGGGAGGCGTGAACATGGGCATTTGAATCATGGGGTTCCTCAAAAACAGCATAAGCCCCCTGTTCCTTCAATGCCAGTGAAGAAAGCGAATGGGCCTCCAGGGAGAGTGGAGACAGAGGAAGAGAGGAGATTGAGGAAGAAGAGGGAGTTTGAGAAGCAAAGGCAAGAAGAGAAGCATAGGCAGCAGCTGAAGGATTCCCAAAATTCAGTTTTGCAAAAGACACAGATGTTGTCTTCTGGGAAAGGACATGGGTCGATTGCGGGGTCGCGAATGGGGGAAAGGAGGGCTACTCCATTCTTGAGCGGCGAGAGGACTGAAAATAGGCTGAAGAAGCCAACCACATTTGTATGCAAGTTGAAATTTCGGAATGAACTTCCAGATCCAAGTGCACAGCCAAAGCTTATGTCTTTGAAGAAAGACAAAGATCAATATACAAAATACACAATAACATCGTTGGAGAAAACATACAAGCCCAAGCTTTTTGTTGAGCCAGATCTTGGGATACCTCTTGACCTGCTTGACCTCAGTGTATACAATCCTCCAAGTGTTAGACCACCCCTTGCTTTGGAAGATGAGGAATTATTGCGGGATGACGTAGCAGCAACCCCTGTGAAAAATAATGGCATCAGAAGAAAAGAGCGGCCTACCGATAAAGGGGTTGCATGGCTGGTTAAAACGCAATATATATCTCCTCTTAGCATGGACTCTGCGAGACAGTCTTTAACTGAAAAACAAGCAAAAGAACTGCGGGAAATGAAGGGAGGTCGCAACATTTTGGACAACCTTAATGACAGGGAAAGACAAATCAAGGACATTGAGGCATCATTTGAGGCCTGCAAGTCACGCCCTGTTCATGCAACCAATAAGAATTTATACCCTGTCGAGATTCTACCTCTGTTGCCCGATTTTGAGCGGTATGAAGACCAATTTGTCCTTGCAGCATTTGATGGTGCTCCTACTGCTGATTCAGAAATCTACAGCAAATTGGACCAGTCCGGTCATGACGCTTATGAATCAAGAGCCATTATGAAAAGTTATAAGGTAACAGGCGCAGATCCAGCTAATCCAGAGAAATTTTTGGCTTACATGGTCCCTTCTCCAAATGAGCTATCAAAAGATCCGTATGATGAATCTGAAGATGTTTCTTATTCTTGGGTTCGCGAGTATCATTACGATGTAAGAGGTGATGATGTGCATGATCCCACAACATACCTTGTTTCATTTGATGAAGAAGAAGCACGCTATGCGCCCCTTCCCACAAAGCTTGTCTTAAGGAAAAAGAGGTCCAAAGAGGGAAAAACCAGCGATGAGGTTGAACATTTTCCCGCACCTTCAAGAGTGACTGTCAGGCAGAGATCAACTGTTGCTGCAATTGAACTAAAGGATTCAGGGGATTATTCAAGGGGATCTGTGTCAAATTTGAAAACAAGACGCTTTGATGTTGAGGATACCCTTGAAAGACCACGGAAGATTGCACGACATCAAGATATTGATGAATATAGTGGTGCTGAAGATGATTTATCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008023 GO:0008150 GO:0008152 GO:0008213 GO:0009909 GO:0009910 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016591 GO:0016593 GO:0019538 GO:0030880 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0051093 GO:0051239 GO:0051241 GO:0051276 GO:0055029 GO:0061695 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:1901564 GO:1902494 GO:1990234 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04011 map04011

Pfam Domains

Protein Families

Paf1

Protein Analysis

710

Amino Acids

79.43

Weight (kDa)

8.51

Isoelectric Point (pI)

68.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79730
fragaria_vesca	FvH4_6g32381 FvH4_6g32381
malus_domestica	MD09G1202900.v1.1 MD17G1184000.v1.1
prunus_persica	Prupe.1G178600_v2.0.a1 Prupe.1G178600_v2.0.a1 Prupe.1G178600_v2.0.a1 Prupe.1G178600_v2.0.a1 Prupe.3G059100_v2.0.a1
pyrus_communis	pycom17g19340
rosa_chinensis	RchiOBHm_Chr2g0140531
rosa_laevigata	RLG00000019875
rosa_multiflora	Rmu_sc0002490.1_g000024
rosa_roxburghii	Rroxscaffold_153G00436660 Rroxscaffold_2G00104720
rosa_rugosa	Rorug02G0363400 Rorug02G0363500
rosa_samantha	Rh2AG414300 Rh2BG424200 Rh2CG400700 Rh2DG434200
rosa_wichuraiana	Rw2G033930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1638
AasI	GACNNNNNNGTC	1 cut(s)	1529
Acc36I	ACCTGC	1 cut(s)	1122
AccB7I	CCANNNNNTGG	1 cut(s)	1097
AccBSI	CCGCTC	3 cut(s)	903, 1240, 1513
AccI	GTMKAC	1 cut(s)	1131
AccII	CGCG	2 cut(s)	868, 1761
AclWI	GGATC	7 cut(s)	555, 568, 974, 1649, 1712, 1793, 2014
AcsI	RAATTY	6 cut(s)	391, 802, 959, 1468, 1673, 2017
AcuI	CTGAAG	4 cut(s)	809, 947, 1755, 2130
AfaI	GTAC	1 cut(s)	383
AfiI	CCNNNNNNNGG	5 cut(s)	505, 506, 1097, 1165, 1254
AflII	CTTAAG	1 cut(s)	1870
AjnI	CCWGG	2 cut(s)	581, 697
AluBI	AGCT	8 cut(s)	179, 329, 787, 1000, 1078, 1661, 1708, 1864
AluI	AGCT	8 cut(s)	179, 329, 787, 1000, 1078, 1661, 1708, 1864
Alw21I	GWGCWC	2 cut(s)	991, 1555
Alw26I	GTCTC	2 cut(s)	704, 1306
Alw44I	GTGCAC	1 cut(s)	987
AlwI	GGATC	7 cut(s)	555, 568, 974, 1649, 1712, 1793, 2014
AlwNI	CAGNNNCTG	1 cut(s)	787
Ama87I	CYCGRG	3 cut(s)	293, 472, 505
AoxI	GGCC	6 cut(s)	14, 41, 226, 692, 1241, 1431
ApaLI	GTGCAC	1 cut(s)	987
ApeKI	GCWGC	7 cut(s)	176, 439, 781, 784, 1199, 1538, 1967
ApoI	RAATTY	6 cut(s)	391, 802, 959, 1468, 1673, 2017
ArsI	GACNNNNNNTTYG	2 cut(s)	989, 1021
Asp700I	GAANNNNTTC	1 cut(s)	1920
AspLEI	GCGC	2 cut(s)	1652, 1849
AspS9I	GGNCC	6 cut(s)	41, 227, 692, 1588, 1690, 1884
AsuC2I	CCSGG	2 cut(s)	506, 507
AsuHPI	GGTGA	5 cut(s)	170, 242, 407, 504, 1796
AvaI	CYCGRG	3 cut(s)	293, 472, 505
AvaII	GGWCC	3 cut(s)	1588, 1690, 1884
BaeGI	GKGCMC	1 cut(s)	991
BamHI	GGATCC	1 cut(s)	560
BanII	GRGCYC	1 cut(s)	580
BbsI	GAAGAC	3 cut(s)	291, 825, 1527
Bbv12I	GWGCWC	2 cut(s)	991, 1555
BbvI	GCAGC	7 cut(s)	188, 451, 793, 796, 1211, 1550, 1954
BccI	CCATC	3 cut(s)	155, 536, 1541
BceAI	ACGGC	1 cut(s)	241
BciT130I	CCWGG	2 cut(s)	583, 699
BciVI	GTATCC	3 cut(s)	201, 1095, 2041
BcnI	CCSGG	2 cut(s)	506, 507
BcoDI	GTCTC	2 cut(s)	704, 1306
BfaI	CTAG	1 cut(s)	135
BfmI	CTRYAG	2 cut(s)	174, 1576
BfrI	CTTAAG	1 cut(s)	1870
BfuAI	ACCTGC	1 cut(s)	1122
BfuI	GTATCC	3 cut(s)	201, 1095, 2041
BglII	AGATCT	1 cut(s)	1093
Bme1390I	CCNGG	4 cut(s)	506, 507, 583, 699
Bme18I	GGWCC	3 cut(s)	1588, 1690, 1884
BmeT110I	CYCGRG	3 cut(s)	293, 472, 505
BmgT120I	GGNCC	6 cut(s)	41, 227, 692, 1588, 1690, 1884
BmiI	GGNNCC	4 cut(s)	562, 579, 636, 1692
BmrFI	CCNGG	4 cut(s)	506, 507, 583, 699
BmsI	GCATC	2 cut(s)	1233, 1430
BoxI	GACNNNNGTC	1 cut(s)	850
BpiI	GAAGAC	3 cut(s)	291, 825, 1527
BplI	GAGNNNNNCTC	2 cut(s)	874, 906
BpmI	CTGGAG	2 cut(s)	318, 681
BpuEI	CTTGAG	2 cut(s)	309, 919
BpuMI	CCSGG	2 cut(s)	506, 507
BsaJI	CCNNGG	6 cut(s)	504, 505, 581, 582, 698, 2063
BsaWI	WCCGGW	1 cut(s)	1595
Bsc4I	CCNNNNNNNGG	5 cut(s)	505, 506, 1097, 1165, 1254
Bse1I	ACTGG	3 cut(s)	335, 674, 1591
BseBI	CCWGG	2 cut(s)	583, 699
BseDI	CCNNGG	6 cut(s)	504, 505, 581, 582, 698, 2063
BseGI	GGATG	3 cut(s)	547, 592, 1195
BseLI	CCNNNNNNNGG	5 cut(s)	505, 506, 1097, 1165, 1254
BseMII	CTCAG	2 cut(s)	410, 1138
BseNI	ACTGG	3 cut(s)	335, 674, 1591
BseRI	GAGGAG	3 cut(s)	321, 739, 1281
BseSI	GKGCMC	1 cut(s)	991
BseXI	GCAGC	7 cut(s)	188, 451, 793, 796, 1211, 1550, 1954
Bsh1236I	CGCG	2 cut(s)	868, 1761
BshFI	GGCC	6 cut(s)	16, 43, 228, 694, 1243, 1433
BsiHKAI	GWGCWC	2 cut(s)	991, 1555
BsiHKCI	CYCGRG	3 cut(s)	293, 472, 505
BsiSI	CCGG	2 cut(s)	506, 1596
BslFI	GGGAC	2 cut(s)	470, 1676
BslI	CCNNNNNNNGG	5 cut(s)	505, 506, 1097, 1165, 1254
BsmAI	GTCTC	2 cut(s)	704, 1306
BsmFI	GGGAC	2 cut(s)	470, 1676
BsnI	GGCC	6 cut(s)	16, 43, 228, 694, 1243, 1433
BsoBI	CYCGRG	3 cut(s)	293, 472, 505
Bsp1286I	GDGCHC	3 cut(s)	580, 991, 1555
Bsp143I	GATC	9 cut(s)	560, 979, 1024, 1093, 1654, 1717, 1798, 1955, 2006
Bsp68I	TCGCGA	2 cut(s)	868, 1761
BspANI	GGCC	6 cut(s)	16, 43, 228, 694, 1243, 1433
BspCNI	CTCAG	2 cut(s)	409, 1137
BspFNI	CGCG	2 cut(s)	868, 1761
BspHI	TCATGA	1 cut(s)	1600
BspLI	GGNNCC	4 cut(s)	562, 579, 636, 1692
BspMAI	CTGCAG	1 cut(s)	178
BspMI	ACCTGC	1 cut(s)	1122
BspPI	GGATC	7 cut(s)	555, 568, 974, 1649, 1712, 1793, 2014
BspTI	CTTAAG	1 cut(s)	1870
BsrBI	CCGCTC	3 cut(s)	903, 1240, 1513
BsrI	ACTGG	3 cut(s)	335, 674, 1591
BssECI	CCNNGG	6 cut(s)	504, 505, 581, 582, 698, 2063
BssMI	GATC	9 cut(s)	560, 979, 1024, 1093, 1654, 1717, 1798, 1955, 2006
BssNAI	GTATAC	1 cut(s)	1132
Bst1107I	GTATAC	1 cut(s)	1132
Bst2UI	CCWGG	2 cut(s)	583, 699
Bst4CI	ACNGT	3 cut(s)	1317, 1945, 1963
Bst6I	CTCTTC	3 cut(s)	714, 734, 762
BstAFI	CTTAAG	1 cut(s)	1870
BstAPI	GCANNNNNTGC	1 cut(s)	1844
BstC8I	GCNNGC	3 cut(s)	174, 1435, 1840
BstDEI	CTNAG	3 cut(s)	396, 1124, 1295
BstDSI	CCRYGG	1 cut(s)	2063
BstF5I	GGATG	3 cut(s)	547, 592, 1195
BstFNI	CGCG	2 cut(s)	868, 1761
BstHHI	GCGC	2 cut(s)	1652, 1849
BstKTI	GATC	9 cut(s)	563, 982, 1027, 1096, 1657, 1720, 1801, 1958, 2009
BstMAI	GTCTC	2 cut(s)	704, 1306
BstMBI	GATC	9 cut(s)	560, 979, 1024, 1093, 1654, 1717, 1798, 1955, 2006
BstNI	CCWGG	2 cut(s)	583, 699
BstPAI	GACNNNNGTC	1 cut(s)	850
BstSCI	CCNGG	4 cut(s)	504, 505, 581, 697
BstSFI	CTRYAG	2 cut(s)	174, 1576
BstSLI	GKGCMC	1 cut(s)	991
BstUI	CGCG	2 cut(s)	868, 1761
BstV1I	GCAGC	7 cut(s)	188, 451, 793, 796, 1211, 1550, 1954
BstV2I	GAAGAC	3 cut(s)	291, 825, 1527
BstX2I	RGATCY	6 cut(s)	560, 979, 1093, 1654, 1717, 2006
BstYI	RGATCY	6 cut(s)	560, 979, 1093, 1654, 1717, 2006
BstZ17I	GTATAC	1 cut(s)	1132
BsuI	GTATCC	3 cut(s)	201, 1095, 2041
BsuRI	GGCC	6 cut(s)	16, 43, 228, 694, 1243, 1433
BtgI	CCRYGG	1 cut(s)	2063
BtgZI	GCGATG	1 cut(s)	1920
BtsCI	GGATG	3 cut(s)	547, 592, 1195
BtsIMutI	CAGTG	3 cut(s)	342, 681, 1132
BtuMI	TCGCGA	2 cut(s)	868, 1761
BveI	ACCTGC	1 cut(s)	1122
Cac8I	GCNNGC	3 cut(s)	174, 1435, 1840
CaiI	CAGNNNCTG	1 cut(s)	787
CciI	TCATGA	1 cut(s)	1600
CfoI	GCGC	2 cut(s)	1652, 1849
Cfr13I	GGNCC	6 cut(s)	41, 227, 692, 1588, 1690, 1884
Cfr9I	CCCGGG	1 cut(s)	505
CseI	GACGC	2 cut(s)	1613, 2040
Csp6I	GTAC	1 cut(s)	382
CspCI	CAANNNNNGTGG	2 cut(s)	1846, 1881
CviQI	GTAC	1 cut(s)	382
DdeI	CTNAG	3 cut(s)	396, 1124, 1295
DpnI	GATC	9 cut(s)	562, 981, 1026, 1095, 1656, 1719, 1800, 1957, 2008
DpnII	GATC	9 cut(s)	560, 979, 1024, 1093, 1654, 1717, 1798, 1955, 2006
DrdI	GACNNNNNNGTC	1 cut(s)	1529
DseDI	GACNNNNNNGTC	1 cut(s)	1529
Eam1104I	CTCTTC	3 cut(s)	714, 734, 762
EarI	CTCTTC	3 cut(s)	714, 734, 762
EciI	GGCGGA	2 cut(s)	276, 306
Eco147I	AGGCCT	2 cut(s)	16, 1433
Eco24I	GRGCYC	1 cut(s)	580
Eco47I	GGWCC	3 cut(s)	1588, 1690, 1884
Eco57I	CTGAAG	4 cut(s)	809, 947, 1755, 2130
Eco88I	CYCGRG	3 cut(s)	293, 472, 505
EcoRI	GAATTC	1 cut(s)	391
EcoRII	CCWGG	2 cut(s)	581, 697
EcoT38I	GRGCYC	1 cut(s)	580
FalI	AAGNNNNNCTT	2 cut(s)	1853, 1885
FaqI	GGGAC	2 cut(s)	470, 1676
FauI	CCCGC	5 cut(s)	30, 853, 1179, 1341, 1933
FblI	GTMKAC	1 cut(s)	1131
FokI	GGATG	3 cut(s)	554, 599, 1202
FriOI	GRGCYC	1 cut(s)	580
FspBI	CTAG	1 cut(s)	135
GlaI	GCGC	2 cut(s)	1651, 1848
GsuI	CTGGAG	2 cut(s)	318, 681
HaeIII	GGCC	6 cut(s)	16, 43, 228, 694, 1243, 1433
HapII	CCGG	2 cut(s)	506, 1596
HgaI	GACGC	2 cut(s)	1613, 2040
HhaI	GCGC	2 cut(s)	1652, 1849
Hin6I	GCGC	2 cut(s)	1650, 1847
HinP1I	GCGC	2 cut(s)	1650, 1847
HindIII	AAGCTT	3 cut(s)	998, 1076, 1862
HpaII	CCGG	2 cut(s)	506, 1596
HphI	GGTGA	5 cut(s)	170, 242, 407, 504, 1796
Hpy166II	GTNNAC	4 cut(s)	512, 611, 989, 1132
Hpy188I	TCNGA	6 cut(s)	117, 966, 1229, 1570, 1735, 2125
Hpy8I	GTNNAC	4 cut(s)	512, 611, 989, 1132
HpyAV	CCTTC	7 cut(s)	99, 675, 784, 1351, 1704, 1862, 1941
HpyCH4III	ACNGT	3 cut(s)	1317, 1945, 1963
HpyCH4IV	ACGT	1 cut(s)	1194
HpyF3I	CTNAG	3 cut(s)	396, 1124, 1295
HpySE526I	ACGT	1 cut(s)	1194
HspAI	GCGC	2 cut(s)	1650, 1847
Kzo9I	GATC	9 cut(s)	560, 979, 1024, 1093, 1654, 1717, 1798, 1955, 2006
LmnI	GCTCC	3 cut(s)	334, 583, 1558
Lsp1109I	GCAGC	7 cut(s)	188, 451, 793, 796, 1211, 1550, 1954
LweI	GCATC	2 cut(s)	1233, 1430
MaeI	CTAG	1 cut(s)	135
MaeII	ACGT	1 cut(s)	1194
MaeIII	GTNAC	4 cut(s)	413, 1440, 1642, 1939
MalI	GATC	9 cut(s)	562, 981, 1026, 1095, 1656, 1719, 1800, 1957, 2008
MbiI	CCGCTC	3 cut(s)	903, 1240, 1513
MboI	GATC	9 cut(s)	560, 979, 1024, 1093, 1654, 1717, 1798, 1955, 2006
MfeI	CAATTG	1 cut(s)	1971
MflI	RGATCY	6 cut(s)	560, 979, 1093, 1654, 1717, 2006
MhlI	GDGCHC	3 cut(s)	580, 991, 1555
MlyI	GAGTC	2 cut(s)	305, 1298
MmeI	TCCRAC	1 cut(s)	1035
MroXI	GAANNNNTTC	1 cut(s)	1920
MseI	TTAA	5 cut(s)	1272, 1322, 1386, 1871, 2128
MslI	CAYNNNNRTG	2 cut(s)	946, 1773
MspA1I	CMGCKG	1 cut(s)	787
MspCI	CTTAAG	1 cut(s)	1870
MspI	CCGG	2 cut(s)	506, 1596
MspR9I	CCNGG	4 cut(s)	506, 507, 583, 699
MunI	CAATTG	1 cut(s)	1971
MvaI	CCWGG	2 cut(s)	583, 699
MvnI	CGCG	2 cut(s)	868, 1761
NciI	CCSGG	2 cut(s)	506, 507
NdeII	GATC	9 cut(s)	560, 979, 1024, 1093, 1654, 1717, 1798, 1955, 2006
NlaIV	GGNNCC	4 cut(s)	562, 579, 636, 1692
NmuCI	GTSAC	3 cut(s)	413, 1440, 1939
NruI	TCGCGA	2 cut(s)	868, 1761
PagI	TCATGA	1 cut(s)	1600
PasI	CCCWGGG	1 cut(s)	582
PceI	AGGCCT	2 cut(s)	16, 1433
PdmI	GAANNNNTTC	1 cut(s)	1920
PfeI	GAWTC	8 cut(s)	52, 625, 794, 1486, 1565, 1613, 1730, 1985
PflMI	CCANNNNNTGG	1 cut(s)	1097
PleI	GAGTC	2 cut(s)	304, 1298
PpsI	GAGTC	2 cut(s)	304, 1298
PshAI	GACNNNNGTC	1 cut(s)	850
PsiI	TTATAA	1 cut(s)	1638
Psp6I	CCWGG	2 cut(s)	581, 697
PspGI	CCWGG	2 cut(s)	581, 697
PspN4I	GGNNCC	4 cut(s)	562, 579, 636, 1692
PspPI	GGNCC	6 cut(s)	41, 227, 692, 1588, 1690, 1884
PstI	CTGCAG	1 cut(s)	178
PstNI	CAGNNNCTG	1 cut(s)	787
PsuI	RGATCY	6 cut(s)	560, 979, 1093, 1654, 1717, 2006
PvuII	CAGCTG	1 cut(s)	787
RruI	TCGCGA	2 cut(s)	868, 1761
RsaI	GTAC	1 cut(s)	383
RsaNI	GTAC	1 cut(s)	382
RseI	CAYNNNNRTG	2 cut(s)	946, 1773
SaqAI	TTAA	5 cut(s)	1272, 1322, 1386, 1871, 2128
Sau3AI	GATC	9 cut(s)	560, 979, 1024, 1093, 1654, 1717, 1798, 1955, 2006
Sau96I	GGNCC	6 cut(s)	41, 227, 692, 1588, 1690, 1884
SchI	GAGTC	2 cut(s)	305, 1298
ScrFI	CCNGG	4 cut(s)	506, 507, 583, 699
SduI	GDGCHC	3 cut(s)	580, 991, 1555
SfaNI	GCATC	2 cut(s)	1233, 1430
SfcI	CTRYAG	2 cut(s)	174, 1576
SinI	GGWCC	3 cut(s)	1588, 1690, 1884
SmaI	CCCGGG	1 cut(s)	507
SmiMI	CAYNNNNRTG	2 cut(s)	946, 1773
SmlI	CTYRAG	3 cut(s)	324, 898, 1870
SmoI	CTYRAG	3 cut(s)	324, 898, 1870
SseBI	AGGCCT	2 cut(s)	16, 1433
SspMI	CTAG	1 cut(s)	135
StuI	AGGCCT	2 cut(s)	16, 1433
StyD4I	CCNGG	4 cut(s)	504, 505, 581, 697
TaaI	ACNGT	3 cut(s)	1317, 1945, 1963
TaiI	ACGT	1 cut(s)	1197
TaqI	TCGA	2 cut(s)	854, 1482
TatI	WGTACW	1 cut(s)	381
TauI	GCSGC	6 cut(s)	46, 49, 292, 445, 906, 1243
TfiI	GAWTC	8 cut(s)	52, 625, 794, 1486, 1565, 1613, 1730, 1985
Tru1I	TTAA	5 cut(s)	1272, 1322, 1386, 1871, 2128
Tru9I	TTAA	5 cut(s)	1272, 1322, 1386, 1871, 2128
TscAI	CASTG	3 cut(s)	342, 681, 1132
TseFI	GTSAC	3 cut(s)	413, 1440, 1939
TseI	GCWGC	7 cut(s)	176, 439, 781, 784, 1199, 1538, 1967
Tsp45I	GTSAC	3 cut(s)	413, 1440, 1939
TspGWI	ACGGA	2 cut(s)	1710, 2080
TspMI	CCCGGG	1 cut(s)	505
TspRI	CASTG	3 cut(s)	342, 681, 1132
Van91I	CCANNNNNTGG	1 cut(s)	1097
Vha464I	CTTAAG	1 cut(s)	1870
VneI	GTGCAC	1 cut(s)	987
VpaK11BI	GGWCC	3 cut(s)	1588, 1690, 1884
XapI	RAATTY	6 cut(s)	391, 802, 959, 1468, 1673, 2017
XmaI	CCCGGG	1 cut(s)	505
XmiI	GTMKAC	1 cut(s)	1131
XmnI	GAANNNNTTC	1 cut(s)	1920
XspI	CTAG	1 cut(s)	135

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.