Photosystem I reaction center subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G52230 AT3G16140 |
| fragaria_vesca | FvH4_6g31740 |
| malus_domestica | MD09G1209500.v1.1 |
| prunus_persica | Prupe.3G067400_v2.0.a1 |
| pyrus_communis | pycom09g12570 pycom17g19830 |
| rosa_chinensis | RchiOBHm_Chr2g0138931 |
| rosa_laevigata | RLG00000019769 |
| rosa_multiflora | Rmu_sc0001376.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00105860 |
| rosa_rugosa | Rorug02G0353200 Rorug02G0353300 |
| rosa_samantha | Rh2AG403300 Rh2BG413800 Rh2CG389400 Rh2DG423600 |
| rosa_wichuraiana | Rw2G032810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 164 |
| AccBSI | CCGCTC | 1 cut(s) | 132 |
| AccI | GTMKAC | 1 cut(s) | 168 |
| AciI | CCGC | 2 cut(s) | 100, 132 |
| AclWI | GGATC | 1 cut(s) | 192 |
| AcoI | YGGCCR | 1 cut(s) | 144 |
| AcuI | CTGAAG | 2 cut(s) | 236, 348 |
| AcvI | CACGTG | 1 cut(s) | 422 |
| AfaI | GTAC | 1 cut(s) | 218 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 207, 322, 413 |
| AgsI | TTSAA | 1 cut(s) | 32 |
| AluBI | AGCT | 3 cut(s) | 26, 82, 412 |
| AluI | AGCT | 3 cut(s) | 26, 82, 412 |
| Alw26I | GTCTC | 2 cut(s) | 150, 263 |
| AlwI | GGATC | 1 cut(s) | 192 |
| AoxI | GGCC | 4 cut(s) | 49, 144, 391, 415 |
| ApaI | GGGCCC | 1 cut(s) | 395 |
| ApeKI | GCWGC | 2 cut(s) | 23, 278 |
| AspS9I | GGNCC | 3 cut(s) | 391, 392, 416 |
| AsuC2I | CCSGG | 1 cut(s) | 202 |
| AsuHPI | GGTGA | 2 cut(s) | 228, 280 |
| BaeGI | GKGCMC | 1 cut(s) | 395 |
| BalI | TGGCCA | 1 cut(s) | 146 |
| BanII | GRGCYC | 1 cut(s) | 395 |
| BbrPI | CACGTG | 1 cut(s) | 422 |
| BbvI | GCAGC | 2 cut(s) | 35, 265 |
| BccI | CCATC | 2 cut(s) | 50, 389 |
| BceAI | ACGGC | 1 cut(s) | 235 |
| BcnI | CCSGG | 1 cut(s) | 202 |
| BcoDI | GTCTC | 2 cut(s) | 150, 263 |
| BfaI | CTAG | 1 cut(s) | 413 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 423 |
| BglII | AGATCT | 1 cut(s) | 429 |
| BisI | GCNGC | 2 cut(s) | 24, 279 |
| BlsI | GCNGC | 2 cut(s) | 25, 280 |
| Bme1390I | CCNGG | 1 cut(s) | 202 |
| BmgT120I | GGNCC | 3 cut(s) | 391, 392, 416 |
| BmiI | GGNNCC | 2 cut(s) | 76, 393 |
| BmrFI | CCNGG | 1 cut(s) | 202 |
| BmsI | GCATC | 2 cut(s) | 14, 217 |
| Bpu10I | CCTNAGC | 1 cut(s) | 19 |
| BpuEI | CTTGAG | 2 cut(s) | 200, 293 |
| BpuMI | CCSGG | 1 cut(s) | 202 |
| BsaAI | YACGTR | 1 cut(s) | 422 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 207, 322, 413 |
| Bse1I | ACTGG | 1 cut(s) | 76 |
| Bse3DI | GCAATG | 1 cut(s) | 339 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 207, 322, 413 |
| BseMI | GCAATG | 1 cut(s) | 339 |
| BseMII | CTCAG | 2 cut(s) | 124, 237 |
| BseNI | ACTGG | 1 cut(s) | 76 |
| BseSI | GKGCMC | 1 cut(s) | 395 |
| BseXI | GCAGC | 2 cut(s) | 35, 265 |
| BshFI | GGCC | 4 cut(s) | 51, 146, 393, 417 |
| BsiSI | CCGG | 2 cut(s) | 57, 201 |
| BslFI | GGGAC | 1 cut(s) | 224 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 207, 322, 413 |
| BsmAI | GTCTC | 2 cut(s) | 150, 263 |
| BsmFI | GGGAC | 1 cut(s) | 224 |
| BsnI | GGCC | 4 cut(s) | 51, 146, 393, 417 |
| Bsp120I | GGGCCC | 1 cut(s) | 391 |
| Bsp1286I | GDGCHC | 1 cut(s) | 395 |
| Bsp143I | GATC | 3 cut(s) | 184, 318, 429 |
| BspACI | CCGC | 2 cut(s) | 100, 132 |
| BspANI | GGCC | 4 cut(s) | 51, 146, 393, 417 |
| BspCNI | CTCAG | 2 cut(s) | 123, 236 |
| BspLI | GGNNCC | 2 cut(s) | 76, 393 |
| BspPI | GGATC | 1 cut(s) | 192 |
| BsrBI | CCGCTC | 1 cut(s) | 132 |
| BsrDI | GCAATG | 1 cut(s) | 339 |
| BsrI | ACTGG | 1 cut(s) | 76 |
| BssMI | GATC | 3 cut(s) | 184, 318, 429 |
| Bst6I | CTCTTC | 1 cut(s) | 255 |
| BstBAI | YACGTR | 1 cut(s) | 422 |
| BstDEI | CTNAG | 4 cut(s) | 19, 110, 223, 350 |
| BstKTI | GATC | 3 cut(s) | 187, 321, 432 |
| BstMAI | GTCTC | 2 cut(s) | 150, 263 |
| BstMBI | GATC | 3 cut(s) | 184, 318, 429 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 11, 20, 143, 423 |
| BstSCI | CCNGG | 1 cut(s) | 200 |
| BstSLI | GKGCMC | 1 cut(s) | 395 |
| BstV1I | GCAGC | 2 cut(s) | 35, 265 |
| BstX2I | RGATCY | 2 cut(s) | 184, 429 |
| BstYI | RGATCY | 2 cut(s) | 184, 429 |
| BsuRI | GGCC | 4 cut(s) | 51, 146, 393, 417 |
| BtsI | GCAGTG | 1 cut(s) | 357 |
| BtsIMutI | CAGTG | 2 cut(s) | 69, 357 |
| Cfr13I | GGNCC | 3 cut(s) | 391, 392, 416 |
| Csp6I | GTAC | 1 cut(s) | 217 |
| CviQI | GTAC | 1 cut(s) | 217 |
| DdeI | CTNAG | 4 cut(s) | 19, 110, 223, 350 |
| DpnI | GATC | 3 cut(s) | 186, 320, 431 |
| DpnII | GATC | 3 cut(s) | 184, 318, 429 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 164 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 164 |
| EaeI | YGGCCR | 1 cut(s) | 144 |
| Eam1104I | CTCTTC | 1 cut(s) | 255 |
| EarI | CTCTTC | 1 cut(s) | 255 |
| Eco24I | GRGCYC | 1 cut(s) | 395 |
| Eco57I | CTGAAG | 2 cut(s) | 236, 348 |
| Eco72I | CACGTG | 1 cut(s) | 422 |
| EcoO109I | RGGNCCY | 1 cut(s) | 391 |
| EcoT38I | GRGCYC | 1 cut(s) | 395 |
| FaiI | YATR | 1 cut(s) | 153 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 197, 229, 284, 316 |
| FaqI | GGGAC | 1 cut(s) | 224 |
| FauI | CCCGC | 1 cut(s) | 107 |
| FblI | GTMKAC | 1 cut(s) | 168 |
| Fnu4HI | GCNGC | 2 cut(s) | 24, 279 |
| FriOI | GRGCYC | 1 cut(s) | 395 |
| Fsp4HI | GCNGC | 2 cut(s) | 24, 279 |
| FspBI | CTAG | 1 cut(s) | 413 |
| GluI | GCNGC | 2 cut(s) | 24, 279 |
| HaeIII | GGCC | 4 cut(s) | 51, 146, 393, 417 |
| HapII | CCGG | 2 cut(s) | 57, 201 |
| HpaII | CCGG | 2 cut(s) | 57, 201 |
| HphI | GGTGA | 2 cut(s) | 228, 280 |
| Hpy166II | GTNNAC | 1 cut(s) | 169 |
| Hpy188I | TCNGA | 4 cut(s) | 113, 226, 255, 367 |
| Hpy188III | TCNNGA | 3 cut(s) | 127, 316, 385 |
| Hpy8I | GTNNAC | 1 cut(s) | 169 |
| HpyAV | CCTTC | 2 cut(s) | 76, 382 |
| HpyCH4IV | ACGT | 1 cut(s) | 421 |
| HpyCH4V | TGCA | 1 cut(s) | 230 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 11, 20, 143, 423 |
| HpyF3I | CTNAG | 4 cut(s) | 19, 110, 223, 350 |
| HpySE526I | ACGT | 1 cut(s) | 421 |
| Kzo9I | GATC | 3 cut(s) | 184, 318, 429 |
| LmnI | GCTCC | 2 cut(s) | 129, 286 |
| LpnPI | CCDG | 8 cut(s) | 48, 57, 70, 112, 116, 173, 214, 329 |
| Lsp1109I | GCAGC | 2 cut(s) | 35, 265 |
| LweI | GCATC | 2 cut(s) | 14, 217 |
| MaeI | CTAG | 1 cut(s) | 413 |
| MaeII | ACGT | 1 cut(s) | 421 |
| MalI | GATC | 3 cut(s) | 186, 320, 431 |
| MbiI | CCGCTC | 1 cut(s) | 132 |
| MboI | GATC | 3 cut(s) | 184, 318, 429 |
| MboII | GAAGA | 1 cut(s) | 242 |
| MflI | RGATCY | 2 cut(s) | 184, 429 |
| MhlI | GDGCHC | 1 cut(s) | 395 |
| MlsI | TGGCCA | 1 cut(s) | 146 |
| MluNI | TGGCCA | 1 cut(s) | 146 |
| MnlI | CCTC | 6 cut(s) | 119, 175, 244, 258, 290, 320 |
| Mox20I | TGGCCA | 1 cut(s) | 146 |
| MscI | TGGCCA | 1 cut(s) | 146 |
| Msp20I | TGGCCA | 1 cut(s) | 146 |
| MspA1I | CMGCKG | 1 cut(s) | 26 |
| MspI | CCGG | 2 cut(s) | 57, 201 |
| MspR9I | CCNGG | 1 cut(s) | 202 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 11, 20, 143, 423 |
| NciI | CCSGG | 1 cut(s) | 202 |
| NdeII | GATC | 3 cut(s) | 184, 318, 429 |
| NlaIV | GGNNCC | 2 cut(s) | 76, 393 |
| PkrI | GCNGC | 2 cut(s) | 25, 280 |
| PmaCI | CACGTG | 1 cut(s) | 422 |
| PmlI | CACGTG | 1 cut(s) | 422 |
| Ppu21I | YACGTR | 1 cut(s) | 422 |
| PspCI | CACGTG | 1 cut(s) | 422 |
| PspN4I | GGNNCC | 2 cut(s) | 76, 393 |
| PspOMI | GGGCCC | 1 cut(s) | 391 |
| PspPI | GGNCC | 3 cut(s) | 391, 392, 416 |
| PsuI | RGATCY | 2 cut(s) | 184, 429 |
| PvuII | CAGCTG | 1 cut(s) | 26 |
| RsaI | GTAC | 1 cut(s) | 218 |
| RsaNI | GTAC | 1 cut(s) | 217 |
| SatI | GCNGC | 2 cut(s) | 24, 279 |
| Sau3AI | GATC | 3 cut(s) | 184, 318, 429 |
| Sau96I | GGNCC | 3 cut(s) | 391, 392, 416 |
| ScrFI | CCNGG | 1 cut(s) | 202 |
| SduI | GDGCHC | 1 cut(s) | 395 |
| SetI | ASST | 8 cut(s) | 20, 28, 84, 180, 331, 351, 414, 424 |
| SfaNI | GCATC | 2 cut(s) | 14, 217 |
| SmlI | CTYRAG | 2 cut(s) | 179, 308 |
| SmoI | CTYRAG | 2 cut(s) | 179, 308 |
| SsiI | CCGC | 2 cut(s) | 100, 132 |
| SspMI | CTAG | 1 cut(s) | 413 |
| StyD4I | CCNGG | 1 cut(s) | 200 |
| TaiI | ACGT | 1 cut(s) | 424 |
| TaqI | TCGA | 1 cut(s) | 174 |
| TscAI | CASTG | 2 cut(s) | 76, 364 |
| TseI | GCWGC | 2 cut(s) | 23, 278 |
| TspRI | CASTG | 2 cut(s) | 76, 364 |
| XmiI | GTMKAC | 1 cut(s) | 168 |
| XspI | CTAG | 1 cut(s) | 413 |