No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15660 |
| fragaria_vesca | FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 |
| malus_domestica | MD09G1215000.v1.1 MD17G1197700.v1.1 |
| prunus_persica | Prupe.3G073700_v2.0.a1 Prupe.3G073700_v2.0.a1 Prupe.3G073700_v2.0.a1 Prupe.3G073700_v2.0.a1 Prupe.3G073700_v2.0.a1 |
| pyrus_communis | pycom09g13190 pycom17g20260 |
| rosa_chinensis | RchiOBHm_Chr2g0137511 |
| rosa_laevigata | RLG00000019658 RLG00000019659 |
| rosa_multiflora | Rmu_sc0000765.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00107040 |
| rosa_rugosa | Rorug02G0342700 Rorug02G0342800 Rorug02G0342900 Rorug02G0343000 Rorug02G0343000 Rorug02G0343000 |
| rosa_samantha | Rh2AG390600 Rh2BG398300 Rh2CG377800 Rh2DG413300 |
| rosa_wichuraiana | Rw2G032000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 991 |
| Acc36I | ACCTGC | 3 cut(s) | 373, 771, 991 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1637, 1826 |
| AccI | GTMKAC | 1 cut(s) | 2080 |
| AciI | CCGC | 5 cut(s) | 35, 75, 803, 883, 1823 |
| AclWI | GGATC | 4 cut(s) | 1100, 1811, 1824, 2033 |
| AcsI | RAATTY | 5 cut(s) | 222, 543, 750, 869, 1292 |
| AcuI | CTGAAG | 2 cut(s) | 1296, 2174 |
| AfaI | GTAC | 3 cut(s) | 214, 1990, 2117 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 40, 41, 74, 438, 1637, 1826, 2132, 2155 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 766 |
| AhlI | ACTAGT | 1 cut(s) | 599 |
| AjiI | CACGTC | 1 cut(s) | 1739 |
| AjnI | CCWGG | 3 cut(s) | 538, 1842, 2125 |
| Alw21I | GWGCWC | 2 cut(s) | 20, 825 |
| Alw26I | GTCTC | 4 cut(s) | 1136, 1646, 1664, 1853 |
| AlwI | GGATC | 4 cut(s) | 1100, 1811, 1824, 2033 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1538, 1985 |
| AoxI | GGCC | 3 cut(s) | 52, 156, 1445 |
| ApeKI | GCWGC | 2 cut(s) | 37, 2204 |
| ApoI | RAATTY | 5 cut(s) | 222, 543, 750, 869, 1292 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2023, 2055 |
| AspLEI | GCGC | 1 cut(s) | 993 |
| AspS9I | GGNCC | 4 cut(s) | 31, 1433, 1664, 1833 |
| AsuHPI | GGTGA | 5 cut(s) | 758, 1263, 1355, 2147, 2170 |
| AsuNHI | GCTAGC | 1 cut(s) | 2200 |
| AvaII | GGWCC | 4 cut(s) | 31, 1433, 1664, 1833 |
| BamHI | GGATCC | 1 cut(s) | 1816 |
| BanII | GRGCYC | 3 cut(s) | 20, 334, 1049 |
| BauI | CACGAG | 2 cut(s) | 2020, 2084 |
| BbsI | GAAGAC | 3 cut(s) | 55, 894, 1509 |
| Bbv12I | GWGCWC | 2 cut(s) | 20, 825 |
| BbvCI | CCTCAGC | 2 cut(s) | 285, 1929 |
| BbvI | GCAGC | 1 cut(s) | 24 |
| BceAI | ACGGC | 3 cut(s) | 44, 516, 1594 |
| BciT130I | CCWGG | 3 cut(s) | 540, 1844, 2127 |
| BciVI | GTATCC | 2 cut(s) | 890, 960 |
| BcoDI | GTCTC | 4 cut(s) | 1136, 1646, 1664, 1853 |
| BcuI | ACTAGT | 1 cut(s) | 599 |
| BfaI | CTAG | 7 cut(s) | 600, 788, 1139, 1655, 1976, 2034, 2201 |
| BfmI | CTRYAG | 1 cut(s) | 38 |
| BfuAI | ACCTGC | 3 cut(s) | 373, 771, 991 |
| BfuI | GTATCC | 2 cut(s) | 890, 960 |
| BglII | AGATCT | 3 cut(s) | 784, 1313, 1370 |
| BisI | GCNGC | 2 cut(s) | 38, 2205 |
| BlpI | GCTNAGC | 1 cut(s) | 987 |
| BlsI | GCNGC | 2 cut(s) | 39, 2206 |
| Bme1390I | CCNGG | 3 cut(s) | 540, 1844, 2127 |
| Bme18I | GGWCC | 4 cut(s) | 31, 1433, 1664, 1833 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 766 |
| BmgBI | CACGTC | 1 cut(s) | 1739 |
| BmgT120I | GGNCC | 4 cut(s) | 31, 1433, 1664, 1833 |
| BmiI | GGNNCC | 3 cut(s) | 33, 530, 1818 |
| BmrFI | CCNGG | 3 cut(s) | 540, 1844, 2127 |
| BmrI | ACTGGG | 2 cut(s) | 20, 752 |
| BmsI | GCATC | 6 cut(s) | 253, 484, 580, 1441, 1636, 1904 |
| BmtI | GCTAGC | 1 cut(s) | 2204 |
| BmuI | ACTGGG | 2 cut(s) | 20, 752 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1662 |
| BpiI | GAAGAC | 3 cut(s) | 55, 894, 1509 |
| BpmI | CTGGAG | 5 cut(s) | 1532, 1630, 1722, 1911, 2109 |
| Bpu10I | CCTNAGC | 3 cut(s) | 285, 726, 1929 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 987 |
| BpuEI | CTTGAG | 3 cut(s) | 131, 606, 1348 |
| BsaBI | GATNNNNATC | 2 cut(s) | 498, 1815 |
| BsaI | GGTCTC | 1 cut(s) | 1646 |
| BsaJI | CCNNGG | 2 cut(s) | 153, 315 |
| BsaWI | WCCGGW | 1 cut(s) | 88 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 40, 41, 74, 438, 1637, 1826, 2132, 2155 |
| Bse1I | ACTGG | 6 cut(s) | 26, 357, 747, 1515, 1527, 1666 |
| Bse3DI | GCAATG | 1 cut(s) | 1489 |
| Bse8I | GATNNNNATC | 2 cut(s) | 498, 1815 |
| BseBI | CCWGG | 3 cut(s) | 540, 1844, 2127 |
| BseDI | CCNNGG | 2 cut(s) | 153, 315 |
| BseGI | GGATG | 8 cut(s) | 132, 499, 512, 802, 1435, 1627, 1831, 2115 |
| BseJI | GATNNNNATC | 2 cut(s) | 498, 1815 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 40, 41, 74, 438, 1637, 1826, 2132, 2155 |
| BseMI | GCAATG | 1 cut(s) | 1489 |
| BseMII | CTCAG | 6 cut(s) | 276, 405, 1173, 1598, 1815, 1943 |
| BseNI | ACTGG | 6 cut(s) | 26, 357, 747, 1515, 1527, 1666 |
| BseRI | GAGGAG | 2 cut(s) | 713, 1637 |
| BseXI | GCAGC | 1 cut(s) | 24 |
| BsgI | GTGCAG | 1 cut(s) | 1551 |
| Bsh1285I | CGRYCG | 1 cut(s) | 588 |
| BshFI | GGCC | 3 cut(s) | 54, 158, 1447 |
| BsiEI | CGRYCG | 1 cut(s) | 588 |
| BsiHKAI | GWGCWC | 2 cut(s) | 20, 825 |
| BsiSI | CCGG | 1 cut(s) | 89 |
| BslFI | GGGAC | 2 cut(s) | 1244, 1505 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 40, 41, 74, 438, 1637, 1826, 2132, 2155 |
| BsmAI | GTCTC | 4 cut(s) | 1136, 1646, 1664, 1853 |
| BsmFI | GGGAC | 2 cut(s) | 1244, 1505 |
| BsmI | GAATGC | 3 cut(s) | 454, 642, 1696 |
| BsnI | GGCC | 3 cut(s) | 54, 158, 1447 |
| Bso31I | GGTCTC | 1 cut(s) | 1646 |
| Bsp1286I | GDGCHC | 4 cut(s) | 20, 334, 825, 1049 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 987 |
| BspACI | CCGC | 5 cut(s) | 35, 75, 803, 883, 1823 |
| BspANI | GGCC | 3 cut(s) | 54, 158, 1447 |
| BspCNI | CTCAG | 6 cut(s) | 277, 406, 1174, 1597, 1814, 1942 |
| BspLI | GGNNCC | 3 cut(s) | 33, 530, 1818 |
| BspMAI | CTGCAG | 1 cut(s) | 42 |
| BspMI | ACCTGC | 3 cut(s) | 373, 771, 991 |
| BspOI | GCTAGC | 1 cut(s) | 2204 |
| BspPI | GGATC | 4 cut(s) | 1100, 1811, 1824, 2033 |
| BspTNI | GGTCTC | 1 cut(s) | 1646 |
| BsrDI | GCAATG | 1 cut(s) | 1489 |
| BsrI | ACTGG | 6 cut(s) | 26, 357, 747, 1515, 1527, 1666 |
| BssECI | CCNNGG | 2 cut(s) | 153, 315 |
| BssNAI | GTATAC | 1 cut(s) | 2081 |
| BssSI | CACGAG | 2 cut(s) | 2020, 2084 |
| BssT1I | CCWWGG | 1 cut(s) | 315 |
| Bst1107I | GTATAC | 1 cut(s) | 2081 |
| Bst2BI | CACGAG | 2 cut(s) | 2020, 2084 |
| Bst2UI | CCWGG | 3 cut(s) | 540, 1844, 2127 |
| Bst4CI | ACNGT | 5 cut(s) | 650, 1089, 1850, 2064, 2101 |
| Bst6I | CTCTTC | 3 cut(s) | 1070, 1751, 1940 |
| BstC8I | GCNNGC | 2 cut(s) | 1206, 2202 |
| BstDEI | CTNAG | 8 cut(s) | 285, 414, 726, 987, 1182, 1584, 1801, 1929 |
| BstDSI | CCRYGG | 1 cut(s) | 153 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 436 |
| BstF5I | GGATG | 8 cut(s) | 132, 499, 512, 802, 1435, 1627, 1831, 2115 |
| BstHHI | GCGC | 1 cut(s) | 993 |
| BstMAI | GTCTC | 4 cut(s) | 1136, 1646, 1664, 1853 |
| BstMCI | CGRYCG | 1 cut(s) | 588 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 2197 |
| BstNI | CCWGG | 3 cut(s) | 540, 1844, 2127 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1662 |
| BstSCI | CCNGG | 3 cut(s) | 538, 1842, 2125 |
| BstSFI | CTRYAG | 1 cut(s) | 38 |
| BstV1I | GCAGC | 1 cut(s) | 24 |
| BstV2I | GAAGAC | 3 cut(s) | 55, 894, 1509 |
| BstX2I | RGATCY | 4 cut(s) | 784, 1313, 1370, 1816 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1843 |
| BstYI | RGATCY | 4 cut(s) | 784, 1313, 1370, 1816 |
| BstZ17I | GTATAC | 1 cut(s) | 2081 |
| BsuI | GTATCC | 2 cut(s) | 890, 960 |
| BsuRI | GGCC | 3 cut(s) | 54, 158, 1447 |
| BtgI | CCRYGG | 1 cut(s) | 153 |
| BtrI | CACGTC | 1 cut(s) | 1739 |
| BtsCI | GGATG | 8 cut(s) | 132, 499, 512, 802, 1435, 1627, 1831, 2115 |
| BtsIMutI | CAGTG | 7 cut(s) | 33, 411, 1508, 1520, 1560, 1659, 1855 |
| BveI | ACCTGC | 3 cut(s) | 373, 771, 991 |
| Cac8I | GCNNGC | 2 cut(s) | 1206, 2202 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1538, 1985 |
| CfoI | GCGC | 1 cut(s) | 993 |
| Cfr13I | GGNCC | 4 cut(s) | 31, 1433, 1664, 1833 |
| Csp6I | GTAC | 3 cut(s) | 213, 1989, 2116 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 231, 266 |
| CviAII | CATG | 4 cut(s) | 443, 758, 1301, 1340 |
| CviQI | GTAC | 3 cut(s) | 213, 1989, 2116 |
| DdeI | CTNAG | 8 cut(s) | 285, 414, 726, 987, 1182, 1584, 1801, 1929 |
| DriI | GACNNNNNGTC | 1 cut(s) | 766 |
| Eam1104I | CTCTTC | 3 cut(s) | 1070, 1751, 1940 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 766 |
| EarI | CTCTTC | 3 cut(s) | 1070, 1751, 1940 |
| Ecl136II | GAGCTC | 1 cut(s) | 18 |
| Eco130I | CCWWGG | 1 cut(s) | 315 |
| Eco147I | AGGCCT | 2 cut(s) | 54, 1447 |
| Eco24I | GRGCYC | 3 cut(s) | 20, 334, 1049 |
| Eco31I | GGTCTC | 1 cut(s) | 1646 |
| Eco32I | GATATC | 2 cut(s) | 394, 1417 |
| Eco47I | GGWCC | 4 cut(s) | 31, 1433, 1664, 1833 |
| Eco53kI | GAGCTC | 1 cut(s) | 18 |
| Eco57I | CTGAAG | 2 cut(s) | 1296, 2174 |
| EcoICRI | GAGCTC | 1 cut(s) | 18 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 436 |
| EcoRI | GAATTC | 2 cut(s) | 869, 1292 |
| EcoRII | CCWGG | 3 cut(s) | 538, 1842, 2125 |
| EcoRV | GATATC | 2 cut(s) | 394, 1417 |
| EcoT14I | CCWWGG | 1 cut(s) | 315 |
| EcoT22I | ATGCAT | 1 cut(s) | 1306 |
| EcoT38I | GRGCYC | 3 cut(s) | 20, 334, 1049 |
| ErhI | CCWWGG | 1 cut(s) | 315 |
| FaeI | CATG | 4 cut(s) | 446, 761, 1304, 1343 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 199, 231, 615, 647 |
| FaqI | GGGAC | 2 cut(s) | 1244, 1505 |
| FatI | CATG | 4 cut(s) | 442, 757, 1300, 1339 |
| FauI | CCCGC | 2 cut(s) | 42, 68 |
| FblI | GTMKAC | 1 cut(s) | 2080 |
| Fnu4HI | GCNGC | 2 cut(s) | 38, 2205 |
| FokI | GGATG | 8 cut(s) | 119, 499, 506, 809, 1442, 1614, 1838, 2122 |
| FriOI | GRGCYC | 3 cut(s) | 20, 334, 1049 |
| Fsp4HI | GCNGC | 2 cut(s) | 38, 2205 |
| FspBI | CTAG | 7 cut(s) | 600, 788, 1139, 1655, 1976, 2034, 2201 |
| GlaI | GCGC | 1 cut(s) | 992 |
| GluI | GCNGC | 2 cut(s) | 38, 2205 |
| GsuI | CTGGAG | 5 cut(s) | 1532, 1630, 1722, 1911, 2109 |
| HaeIII | GGCC | 3 cut(s) | 54, 158, 1447 |
| HapII | CCGG | 1 cut(s) | 89 |
| HhaI | GCGC | 1 cut(s) | 993 |
| Hin1II | CATG | 4 cut(s) | 446, 761, 1304, 1343 |
| Hin6I | GCGC | 1 cut(s) | 991 |
| HinP1I | GCGC | 1 cut(s) | 991 |
| HincII | GTYRAC | 4 cut(s) | 362, 536, 1192, 1560 |
| HindII | GTYRAC | 4 cut(s) | 362, 536, 1192, 1560 |
| HinfI | GANTC | 7 cut(s) | 169, 373, 508, 658, 1328, 1903, 2089 |
| HpaII | CCGG | 1 cut(s) | 89 |
| HphI | GGTGA | 5 cut(s) | 758, 1263, 1355, 2147, 2170 |
| Hpy99I | CGWCG | 1 cut(s) | 122 |
| HpyAV | CCTTC | 6 cut(s) | 785, 1001, 1161, 1784, 1896, 2149 |
| HpyCH4III | ACNGT | 5 cut(s) | 650, 1089, 1850, 2064, 2101 |
| HpyCH4IV | ACGT | 2 cut(s) | 1738, 2077 |
| HpyCH4V | TGCA | 9 cut(s) | 40, 266, 497, 692, 719, 1304, 1532, 1879, 2212 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 2197 |
| HpyF3I | CTNAG | 8 cut(s) | 285, 414, 726, 987, 1182, 1584, 1801, 1929 |
| HpySE526I | ACGT | 2 cut(s) | 1738, 2077 |
| Hsp92II | CATG | 4 cut(s) | 446, 761, 1304, 1343 |
| HspAI | GCGC | 1 cut(s) | 991 |
| LmnI | GCTCC | 6 cut(s) | 23, 528, 820, 1624, 1703, 1892 |
| Lsp1109I | GCAGC | 1 cut(s) | 24 |
| LweI | GCATC | 6 cut(s) | 253, 484, 580, 1441, 1636, 1904 |
| MaeI | CTAG | 7 cut(s) | 600, 788, 1139, 1655, 1976, 2034, 2201 |
| MaeII | ACGT | 2 cut(s) | 1738, 2077 |
| MaeIII | GTNAC | 2 cut(s) | 44, 2135 |
| MflI | RGATCY | 4 cut(s) | 784, 1313, 1370, 1816 |
| MhlI | GDGCHC | 4 cut(s) | 20, 334, 825, 1049 |
| MlyI | GAGTC | 3 cut(s) | 178, 382, 2098 |
| MmeI | TCCRAC | 5 cut(s) | 45, 197, 471, 1055, 1655 |
| Mph1103I | ATGCAT | 1 cut(s) | 1306 |
| MslI | CAYNNNNRTG | 1 cut(s) | 447 |
| MspA1I | CMGCKG | 3 cut(s) | 37, 1118, 1823 |
| MspI | CCGG | 1 cut(s) | 89 |
| MspR9I | CCNGG | 3 cut(s) | 540, 1844, 2127 |
| Mva1269I | GAATGC | 3 cut(s) | 454, 642, 1696 |
| MvaI | CCWGG | 3 cut(s) | 540, 1844, 2127 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 2197 |
| NheI | GCTAGC | 1 cut(s) | 2200 |
| NlaIII | CATG | 4 cut(s) | 446, 761, 1304, 1343 |
| NlaIV | GGNNCC | 3 cut(s) | 33, 530, 1818 |
| NmuCI | GTSAC | 1 cut(s) | 2135 |
| NsiI | ATGCAT | 1 cut(s) | 1306 |
| PacI | TTAATTAA | 1 cut(s) | 1236 |
| PaqCI | CACCTGC | 1 cut(s) | 991 |
| PceI | AGGCCT | 2 cut(s) | 54, 1447 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 114, 224 |
| PctI | GAATGC | 3 cut(s) | 454, 642, 1696 |
| PfeI | GAWTC | 4 cut(s) | 508, 658, 1328, 1903 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1637, 1826 |
| PfoI | TCCNGGA | 1 cut(s) | 2125 |
| PkrI | GCNGC | 2 cut(s) | 39, 2206 |
| PleI | GAGTC | 3 cut(s) | 177, 381, 2097 |
| PpsI | GAGTC | 3 cut(s) | 177, 381, 2097 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1662 |
| Psp124BI | GAGCTC | 1 cut(s) | 20 |
| Psp6I | CCWGG | 3 cut(s) | 538, 1842, 2125 |
| PspGI | CCWGG | 3 cut(s) | 538, 1842, 2125 |
| PspN4I | GGNNCC | 3 cut(s) | 33, 530, 1818 |
| PspPI | GGNCC | 4 cut(s) | 31, 1433, 1664, 1833 |
| PstI | CTGCAG | 1 cut(s) | 42 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1538, 1985 |
| PsuI | RGATCY | 4 cut(s) | 784, 1313, 1370, 1816 |
| PvuII | CAGCTG | 1 cut(s) | 1118 |
| RsaI | GTAC | 3 cut(s) | 214, 1990, 2117 |
| RsaNI | GTAC | 3 cut(s) | 213, 1989, 2116 |
| RseI | CAYNNNNRTG | 1 cut(s) | 447 |
| SacI | GAGCTC | 1 cut(s) | 20 |
| SatI | GCNGC | 2 cut(s) | 38, 2205 |
| Sau96I | GGNCC | 4 cut(s) | 31, 1433, 1664, 1833 |
| SchI | GAGTC | 3 cut(s) | 178, 382, 2098 |
| ScrFI | CCNGG | 3 cut(s) | 540, 1844, 2127 |
| SduI | GDGCHC | 4 cut(s) | 20, 334, 825, 1049 |
| SfaNI | GCATC | 6 cut(s) | 253, 484, 580, 1441, 1636, 1904 |
| SfcI | CTRYAG | 1 cut(s) | 38 |
| SinI | GGWCC | 4 cut(s) | 31, 1433, 1664, 1833 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 447 |
| SmlI | CTYRAG | 3 cut(s) | 146, 621, 1363 |
| SmoI | CTYRAG | 3 cut(s) | 146, 621, 1363 |
| SpeI | ACTAGT | 1 cut(s) | 599 |
| SseBI | AGGCCT | 2 cut(s) | 54, 1447 |
| SsiI | CCGC | 5 cut(s) | 35, 75, 803, 883, 1823 |
| SspMI | CTAG | 7 cut(s) | 600, 788, 1139, 1655, 1976, 2034, 2201 |
| SstI | GAGCTC | 1 cut(s) | 20 |
| StuI | AGGCCT | 2 cut(s) | 54, 1447 |
| StyD4I | CCNGG | 3 cut(s) | 538, 1842, 2125 |
| StyI | CCWWGG | 1 cut(s) | 315 |
| TaaI | ACNGT | 5 cut(s) | 650, 1089, 1850, 2064, 2101 |
| TaiI | ACGT | 2 cut(s) | 1741, 2080 |
| TaqI | TCGA | 4 cut(s) | 298, 584, 1574, 1786 |
| TaqII | GACCGA | 2 cut(s) | 602, 1821 |
| TfiI | GAWTC | 4 cut(s) | 508, 658, 1328, 1903 |
| TscAI | CASTG | 7 cut(s) | 33, 418, 1515, 1527, 1560, 1666, 1855 |
| TseFI | GTSAC | 1 cut(s) | 2135 |
| TseI | GCWGC | 2 cut(s) | 37, 2204 |
| Tsp45I | GTSAC | 1 cut(s) | 2135 |
| TspDTI | ATGAA | 6 cut(s) | 17, 863, 1007, 1605, 1731, 2126 |
| TspGWI | ACGGA | 4 cut(s) | 142, 541, 1957, 2154 |
| TspRI | CASTG | 7 cut(s) | 33, 418, 1515, 1527, 1560, 1666, 1855 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1637, 1826 |
| VpaK11BI | GGWCC | 4 cut(s) | 31, 1433, 1664, 1833 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 436 |
| XapI | RAATTY | 5 cut(s) | 222, 543, 750, 869, 1292 |
| XbaI | TCTAGA | 2 cut(s) | 787, 1138 |
| XmiI | GTMKAC | 1 cut(s) | 2080 |
| XspI | CTAG | 7 cut(s) | 600, 788, 1139, 1655, 1976, 2034, 2201 |
| Zsp2I | ATGCAT | 1 cut(s) | 1306 |