Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0003629

Physical Location & Seq

Genomic Coordinates Forward (+)

58609992 .. 58615320

Gene Structure 5329 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG390600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGAGTGGCGACTCCCGCTTGTGCCCACATTCAACTTTCTTTGAAAAATTAGGGCTCTACTTCTCAAATGTGCAGATGAGTCGGAGCTCCGATCTAGTCGACCCCCTTCTGGGCAGCTCTTTCTTCCCCAAGGCCAAGTTCTCGTCGGACCCTTCCAAGCCCTACGACTTCGACCACGACCTCCAAGCCATCAACCTCCACCTCAAGTCCACCACGGCCTCACTATCTGGTCTTAAAGATCACGTGAAGAACATTTTCAGTGGCAGTTCAGTTATTCCGCAGTCTGATATGTCACAAGCATCGAAATGCGTAAACGGAGTGGTTCCTGCAAATGATGTGGACAATCACCGAGAGAGAAGACCTGCCTTGGGTCTTAAACGCGCTCGTTTTTCTTTGAAACCTAATTCCAGTCAACCTGATATTACTTTGGGACCGACGTTTGATTCTAAAAAATACAAAGACCCCAACGACTACTTCACTTTCTATGAAAGAAATGAGAATGCTAAAAGAGAACTGGAGAAGCAGATGGGTGGTGCTGTATTTGATGGAGATAAGCAGAATCCATCACCAATTACACGTGCCCGGCGACCAGGAATTCCGCGGAGGTCAGTGAAATACAAGCATTGCATTTCATCGCTTTACAATGAAATCGTTGAGAATGCTATATCCACTCAAGAGACGTTTGAAACGAGCATTCTCAGTCCATTGAATCACAGCTCACAAACAGAATCCCATGAAAAAGTTGCATTGGAGGAGATGGATTTAGCTGGTTCAAAAGTTAAGGAAGACAACAAATGGAATAATGACATTCTGGATGGGCTATTGTCTCAGCCTACCGAAGATCTAGAAGGGGATGGCGCTTTCCATCTTTTAAAGGAGAGCTTGCACATTAAAAATTTTGAACTAGAGGATATATGCCTTCCAGAATTCCCAGATACCAAAAAGGCTGATTTGAAGTCTTCAAGAAAAACCTTGCCAAACCCTAGACCTGTGAAACCTAGACAGGGGGCAGAAGGGTCCATTCATTTATCTTCTCCAACACCACCAAAGAGCCCTTTGGCTTCGTTGTCTTTATTGAGTAAGAGAAGTTTAGTGTCAATTCCATTAAATGATCCATTTTCAGCTTTTGATATTGATCAGTTTCCGGTGACAAATCCTTCTTCAGTTGAGAATAGAAACAAACAATCTGATCGGATTGACATTGCAGAGCAGAAAATGATTTCTGATACGTTGAAGTCACCTTTAATTAAACAAAGTGACAAGATTGAAGGTGCCAAGACAGGTTCATGTGAGGTGACTGTTAAGGAATTCACTAATGCAGTGAAAAGGTCTAAGAGGAACAGTTTAAGTAAACTTGGTGTTGGTTATGATGTTGACATGGAGGAGGAGATTGGAGGCAGTAAGGTTACGTGTGAGACATTAAGTATGCCTGAAGATGATACAGATACTTGGGCAAATGGGGTTGATAATAGCGACAAGATACAGGTGGAAGACAAGCTGCAGGAACCAGGTCCTGAAGTTAATGCGGCAGACTCAACTTTGGAAAAGCTTAACGGCGCTCACAGTCAAGTTGCTGATGATGTGATTGATAGTGATGAGATACAAGAGGAAGACAAAGTGCAGGAAGCAATGCCTGAACATAATGAGCAAGACAAACTGCAGGATGCAGTGGCATGTGCAGAGCATGGATTTGATGCGGCAGACTCAACAGTGGAAAACTTGAATGATGCTCCAAGTCAATTAGATCAATTACACTCAGCTCCAGTTGAGGAGCAATCAAGGGATAGTCTCTCCAGAAACCCTGACTTTGGTCTAGAGAAGCAGAATGAGGTTAATAATTTGCAGGCTATTTTCATTTGCTACTCTTTCATATTATTTGTTGATTGTCTTGATCTTTTAGTGCCTGTTGGCACACTTCTAGCATTTGCAGTAGACTCATCTTCTGTTGTGTTTCCTCTAAATAATGGGTTTTTGTTAGTACTCTGTCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000819 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006996 GO:0007049 GO:0007059 GO:0007080 GO:0007127 GO:0008150 GO:0008608 GO:0009987 GO:0016043 GO:0019237 GO:0022402 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032991 GO:0034508 GO:0034622 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051316 GO:0051321 GO:0051382 GO:0051383 GO:0051455 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0061982 GO:0065003 GO:0065004 GO:0070013 GO:0070925 GO:0071824 GO:0071840 GO:0097159 GO:0098687 GO:0098813 GO:0140013 GO:0140014 GO:1901363 GO:1903046 GO:1903047 GO:1990837

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

663

Amino Acids

73.3

Weight (kDa)

4.91

Isoelectric Point (pI)

56.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15660
fragaria_vesca	FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920
malus_domestica	MD09G1215000.v1.1 MD17G1197700.v1.1
prunus_persica	Prupe.3G073700_v2.0.a1 Prupe.3G073700_v2.0.a1 Prupe.3G073700_v2.0.a1 Prupe.3G073700_v2.0.a1 Prupe.3G073700_v2.0.a1
pyrus_communis	pycom09g13190 pycom17g20260
rosa_chinensis	RchiOBHm_Chr2g0137511
rosa_laevigata	RLG00000019658 RLG00000019659
rosa_multiflora	Rmu_sc0000765.1_g000007
rosa_roxburghii	Rroxscaffold_2G00107040
rosa_rugosa	Rorug02G0342700 Rorug02G0342800 Rorug02G0342900 Rorug02G0343000 Rorug02G0343000 Rorug02G0343000
rosa_samantha	Rh2AG390600 Rh2BG398300 Rh2CG377800 Rh2DG413300
rosa_wichuraiana	Rw2G032000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	370
AccB1I	GGYRCC	1 cut(s)	1271
AccI	GTMKAC	2 cut(s)	99, 1932
AccII	CGCG	2 cut(s)	381, 601
AciI	CCGC	6 cut(s)	16, 278, 599, 601, 1526, 1697
AclWI	GGATC	1 cut(s)	1106
AcsI	RAATTY	4 cut(s)	594, 895, 926, 1307
AcuI	CTGAAG	3 cut(s)	1146, 1452, 1536
AcvI	CACGTG	2 cut(s)	244, 578
AfaI	GTAC	1 cut(s)	1980
AfiI	CCNNNNNNNGG	5 cut(s)	109, 110, 368, 1004, 1808
AflIII	ACRYGT	2 cut(s)	575, 1409
AjnI	CCWGG	2 cut(s)	589, 1507
AjuI	GAANNNNNNNTTGG	4 cut(s)	122, 154, 458, 490
AluBI	AGCT	9 cut(s)	87, 117, 717, 767, 882, 1124, 1498, 1549, 1760
AluI	AGCT	9 cut(s)	87, 117, 717, 767, 882, 1124, 1498, 1549, 1760
Alw21I	GWGCWC	1 cut(s)	89
Alw26I	GTCTC	4 cut(s)	671, 831, 1409, 1793
AlwI	GGATC	1 cut(s)	1106
AlwNI	CAGNNNCTG	1 cut(s)	1514
AoxI	GGCC	2 cut(s)	132, 216
ApeKI	GCWGC	2 cut(s)	114, 1498
ApoI	RAATTY	4 cut(s)	594, 895, 926, 1307
Asp700I	GAANNNNTTC	1 cut(s)	254
AspLEI	GCGC	3 cut(s)	383, 860, 1559
AspS9I	GGNCC	4 cut(s)	148, 431, 1017, 1511
AsuC2I	CCSGG	1 cut(s)	583
AsuHPI	GGTGA	5 cut(s)	338, 558, 1159, 1230, 1306
AvaII	GGWCC	4 cut(s)	148, 431, 1017, 1511
BaeGI	GKGCMC	2 cut(s)	26, 583
BanI	GGYRCC	1 cut(s)	1271
BanII	GRGCYC	3 cut(s)	57, 89, 1055
BbrPI	CACGTG	2 cut(s)	244, 578
BbsI	GAAGAC	5 cut(s)	364, 792, 951, 1497, 1617
Bbv12I	GWGCWC	1 cut(s)	89
BbvI	GCAGC	2 cut(s)	126, 1485
BccI	CCATC	8 cut(s)	197, 520, 539, 571, 751, 809, 848, 873
BceAI	ACGGC	2 cut(s)	231, 1570
BcgI	CGANNNNNNTGC	2 cut(s)	62, 96
BciT130I	CCWGG	2 cut(s)	591, 1509
BclI	TGATCA	1 cut(s)	1135
BcnI	CCSGG	1 cut(s)	583
BcoDI	GTCTC	4 cut(s)	671, 831, 1409, 1793
BfaI	CTAG	7 cut(s)	95, 845, 905, 984, 999, 1814, 1919
BfmI	CTRYAG	2 cut(s)	1499, 1658
BfoI	RGCGCY	2 cut(s)	861, 1560
BfuAI	ACCTGC	1 cut(s)	370
BglII	AGATCT	1 cut(s)	841
BisI	GCNGC	4 cut(s)	115, 1499, 1527, 1698
BlsI	GCNGC	4 cut(s)	116, 1500, 1528, 1699
BmcAI	AGTACT	1 cut(s)	1980
Bme1390I	CCNGG	3 cut(s)	583, 591, 1509
Bme18I	GGWCC	4 cut(s)	148, 431, 1017, 1511
BmgT120I	GGNCC	4 cut(s)	148, 431, 1017, 1511
BmiI	GGNNCC	6 cut(s)	150, 324, 432, 1018, 1273, 1506
BmrFI	CCNGG	3 cut(s)	583, 591, 1509
BmsI	GCATC	4 cut(s)	308, 1654, 1684, 1717
BoxI	GACNNNNGTC	1 cut(s)	1809
BpiI	GAAGAC	5 cut(s)	364, 792, 951, 1497, 1617
BpmI	CTGGAG	3 cut(s)	536, 1746, 1777
BpuEI	CTTGAG	2 cut(s)	188, 657
BpuMI	CCSGG	1 cut(s)	583
BsaAI	YACGTR	3 cut(s)	244, 578, 1410
BsaBI	GATNNNNATC	1 cut(s)	1134
BsaJI	CCNNGG	4 cut(s)	129, 213, 366, 599
BsaWI	WCCGGW	1 cut(s)	1144
Bsc4I	CCNNNNNNNGG	5 cut(s)	109, 110, 368, 1004, 1808
Bse1I	ACTGG	3 cut(s)	408, 519, 1763
Bse3DI	GCAATG	3 cut(s)	622, 1200, 1635
Bse8I	GATNNNNATC	1 cut(s)	1134
BseBI	CCWGG	2 cut(s)	591, 1509
BseDI	CCNNGG	4 cut(s)	129, 213, 366, 599
BseGI	GGATG	3 cut(s)	820, 859, 1669
BseJI	GATNNNNATC	1 cut(s)	1134
BseLI	CCNNNNNNNGG	5 cut(s)	109, 110, 368, 1004, 1808
BseMI	GCAATG	3 cut(s)	622, 1200, 1635
BseMII	CTCAG	3 cut(s)	712, 842, 1770
BseNI	ACTGG	3 cut(s)	408, 519, 1763
BseRI	GAGGAG	4 cut(s)	767, 1397, 1400, 1784
BseSI	GKGCMC	2 cut(s)	26, 583
BseXI	GCAGC	2 cut(s)	126, 1485
BsgI	GTGCAG	3 cut(s)	92, 1640, 1698
Bsh1236I	CGCG	2 cut(s)	381, 601
BshFI	GGCC	2 cut(s)	134, 218
BshNI	GGYRCC	1 cut(s)	1271
BsiHKAI	GWGCWC	1 cut(s)	89
BsiSI	CCGG	2 cut(s)	583, 1145
BslFI	GGGAC	1 cut(s)	444
BslI	CCNNNNNNNGG	5 cut(s)	109, 110, 368, 1004, 1808
BsmAI	GTCTC	4 cut(s)	671, 831, 1409, 1793
BsmBI	CGTCTC	1 cut(s)	671
BsmFI	GGGAC	1 cut(s)	444
BsmI	GAATGC	3 cut(s)	505, 664, 693
BsnI	GGCC	2 cut(s)	134, 218
Bsp1286I	GDGCHC	5 cut(s)	26, 57, 89, 583, 1055
Bsp143I	GATC	8 cut(s)	91, 238, 841, 1111, 1135, 1189, 1744, 1891
BspACI	CCGC	6 cut(s)	16, 278, 599, 601, 1526, 1697
BspANI	GGCC	2 cut(s)	134, 218
BspCNI	CTCAG	3 cut(s)	711, 841, 1769
BspFNI	CGCG	2 cut(s)	381, 601
BspLI	GGNNCC	6 cut(s)	150, 324, 432, 1018, 1273, 1506
BspMAI	CTGCAG	2 cut(s)	1503, 1662
BspMI	ACCTGC	1 cut(s)	370
BspPI	GGATC	1 cut(s)	1106
BspT107I	GGYRCC	1 cut(s)	1271
BsrDI	GCAATG	3 cut(s)	622, 1200, 1635
BsrI	ACTGG	3 cut(s)	408, 519, 1763
BssECI	CCNNGG	4 cut(s)	129, 213, 366, 599
BssMI	GATC	8 cut(s)	91, 238, 841, 1111, 1135, 1189, 1744, 1891
BssT1I	CCWWGG	2 cut(s)	129, 366
Bst2UI	CCWGG	2 cut(s)	591, 1509
Bst4CI	ACNGT	4 cut(s)	1300, 1343, 1565, 1711
BstBAI	YACGTR	3 cut(s)	244, 578, 1410
BstC8I	GCNNGC	2 cut(s)	884, 1845
BstDEI	CTNAG	4 cut(s)	698, 828, 1332, 1756
BstDSI	CCRYGG	2 cut(s)	213, 599
BstF5I	GGATG	3 cut(s)	820, 859, 1669
BstFNI	CGCG	2 cut(s)	381, 601
BstH2I	RGCGCY	2 cut(s)	861, 1560
BstHHI	GCGC	3 cut(s)	383, 860, 1559
BstKTI	GATC	8 cut(s)	94, 241, 844, 1114, 1138, 1192, 1747, 1894
BstMAI	GTCTC	4 cut(s)	671, 831, 1409, 1793
BstMBI	GATC	8 cut(s)	91, 238, 841, 1111, 1135, 1189, 1744, 1891
BstMWI	GCNNNNNNNGC	1 cut(s)	15
BstNI	CCWGG	2 cut(s)	591, 1509
BstNSI	RCATGY	1 cut(s)	1677
BstPAI	GACNNNNGTC	1 cut(s)	1809
BstSCI	CCNGG	3 cut(s)	581, 589, 1507
BstSFI	CTRYAG	2 cut(s)	1499, 1658
BstSLI	GKGCMC	2 cut(s)	26, 583
BstUI	CGCG	2 cut(s)	381, 601
BstV1I	GCAGC	2 cut(s)	126, 1485
BstV2I	GAAGAC	5 cut(s)	364, 792, 951, 1497, 1617
BstX2I	RGATCY	1 cut(s)	841
BstYI	RGATCY	1 cut(s)	841
BsuRI	GGCC	2 cut(s)	134, 218
BtgI	CCRYGG	2 cut(s)	213, 599
BtgZI	GCGATG	1 cut(s)	618
BtsCI	GGATG	3 cut(s)	820, 859, 1669
BtsI	GCAGTG	2 cut(s)	1326, 1674
BtsIMutI	CAGTG	5 cut(s)	265, 615, 1326, 1674, 1716
BveI	ACCTGC	1 cut(s)	370
Cac8I	GCNNGC	2 cut(s)	884, 1845
CaiI	CAGNNNCTG	1 cut(s)	1514
CfoI	GCGC	3 cut(s)	383, 860, 1559
Cfr13I	GGNCC	4 cut(s)	148, 431, 1017, 1511
Cfr42I	CCGCGG	1 cut(s)	602
CsiI	ACCWGGT	1 cut(s)	1507
Csp6I	GTAC	1 cut(s)	1979
CspCI	CAANNNNNGTGG	2 cut(s)	318, 353
CviAII	CATG	5 cut(s)	734, 1287, 1378, 1674, 1685
CviQI	GTAC	1 cut(s)	1979
DdeI	CTNAG	4 cut(s)	698, 828, 1332, 1756
DpnI	GATC	8 cut(s)	93, 240, 843, 1113, 1137, 1191, 1746, 1893
DpnII	GATC	8 cut(s)	91, 238, 841, 1111, 1135, 1189, 1744, 1891
DraI	TTTAAA	1 cut(s)	873
Ecl136II	GAGCTC	1 cut(s)	87
Eco130I	CCWWGG	2 cut(s)	129, 366
Eco24I	GRGCYC	3 cut(s)	57, 89, 1055
Eco47I	GGWCC	4 cut(s)	148, 431, 1017, 1511
Eco53kI	GAGCTC	1 cut(s)	87
Eco57I	CTGAAG	3 cut(s)	1146, 1452, 1536
Eco72I	CACGTG	2 cut(s)	244, 578
EcoICRI	GAGCTC	1 cut(s)	87
EcoO109I	RGGNCCY	1 cut(s)	1511
EcoRI	GAATTC	3 cut(s)	594, 926, 1307
EcoRII	CCWGG	2 cut(s)	589, 1507
EcoT14I	CCWWGG	2 cut(s)	129, 366
EcoT38I	GRGCYC	3 cut(s)	57, 89, 1055
ErhI	CCWWGG	2 cut(s)	129, 366
Esp3I	CGTCTC	1 cut(s)	671
FaeI	CATG	5 cut(s)	737, 1290, 1381, 1677, 1688
FalI	AAGNNNNNCTT	2 cut(s)	866, 898
FaqI	GGGAC	1 cut(s)	444
FatI	CATG	5 cut(s)	733, 1286, 1377, 1673, 1684
FauI	CCCGC	1 cut(s)	23
FbaI	TGATCA	1 cut(s)	1135
FblI	GTMKAC	2 cut(s)	99, 1932
Fnu4HI	GCNGC	4 cut(s)	115, 1499, 1527, 1698
FokI	GGATG	3 cut(s)	827, 866, 1676
FriOI	GRGCYC	3 cut(s)	57, 89, 1055
Fsp4HI	GCNGC	4 cut(s)	115, 1499, 1527, 1698
FspBI	CTAG	7 cut(s)	95, 845, 905, 984, 999, 1814, 1919
GlaI	GCGC	3 cut(s)	382, 859, 1558
GluI	GCNGC	4 cut(s)	115, 1499, 1527, 1698
GsuI	CTGGAG	3 cut(s)	536, 1746, 1777
HaeII	RGCGCY	2 cut(s)	861, 1560
HaeIII	GGCC	2 cut(s)	134, 218
HapII	CCGG	2 cut(s)	583, 1145
HhaI	GCGC	3 cut(s)	383, 860, 1559
Hin1II	CATG	5 cut(s)	737, 1290, 1381, 1677, 1688
Hin6I	GCGC	3 cut(s)	381, 858, 1557
HinP1I	GCGC	3 cut(s)	381, 858, 1557
HincII	GTYRAC	3 cut(s)	100, 413, 1375
HindII	GTYRAC	3 cut(s)	100, 413, 1375
HindIII	AAGCTT	1 cut(s)	1547
HinfI	GANTC	9 cut(s)	11, 79, 443, 559, 709, 728, 1532, 1703, 1934
HpaII	CCGG	2 cut(s)	583, 1145
HphI	GGTGA	5 cut(s)	338, 558, 1159, 1230, 1306
Hpy166II	GTNNAC	8 cut(s)	100, 210, 313, 340, 413, 1352, 1375, 1933
Hpy188I	TCNGA	7 cut(s)	84, 91, 148, 286, 1189, 1194, 1225
Hpy188III	TCNNGA	9 cut(s)	674, 812, 845, 923, 963, 1514, 1794, 1814, 1889
Hpy8I	GTNNAC	8 cut(s)	100, 210, 313, 340, 413, 1352, 1375, 1933
Hpy99I	CGWCG	2 cut(s)	148, 439
HpyAV	CCTTC	7 cut(s)	116, 162, 842, 929, 1007, 1167, 1262
HpyCH4III	ACNGT	4 cut(s)	1300, 1343, 1565, 1711
HpyCH4IV	ACGT	6 cut(s)	243, 437, 577, 680, 1229, 1409
HpyF10VI	GCNNNNNNNGC	1 cut(s)	15
HpyF3I	CTNAG	4 cut(s)	698, 828, 1332, 1756
HpySE526I	ACGT	6 cut(s)	243, 437, 577, 680, 1229, 1409
Hsp92II	CATG	5 cut(s)	737, 1290, 1381, 1677, 1688
HspAI	GCGC	3 cut(s)	381, 858, 1557
Ksp22I	TGATCA	1 cut(s)	1135
KspI	CCGCGG	1 cut(s)	602
Kzo9I	GATC	8 cut(s)	91, 238, 841, 1111, 1135, 1189, 1744, 1891
LmnI	GCTCC	5 cut(s)	84, 92, 1735, 1765, 1771
Lsp1109I	GCAGC	2 cut(s)	126, 1485
LweI	GCATC	4 cut(s)	308, 1654, 1684, 1717
MabI	ACCWGGT	1 cut(s)	1507
MaeI	CTAG	7 cut(s)	95, 845, 905, 984, 999, 1814, 1919
MaeII	ACGT	6 cut(s)	243, 437, 577, 680, 1229, 1409
MaeIII	GTNAC	7 cut(s)	291, 1147, 1236, 1256, 1294, 1405, 1985
MalI	GATC	8 cut(s)	93, 240, 843, 1113, 1137, 1191, 1746, 1893
MboI	GATC	8 cut(s)	91, 238, 841, 1111, 1135, 1189, 1744, 1891
MflI	RGATCY	1 cut(s)	841
MhlI	GDGCHC	5 cut(s)	26, 57, 89, 583, 1055
MlyI	GAGTC	5 cut(s)	5, 88, 1526, 1697, 1928
MmeI	TCCRAC	3 cut(s)	62, 126, 1061
MroXI	GAANNNNTTC	1 cut(s)	254
MslI	CAYNNNNRTG	1 cut(s)	304
MspA1I	CMGCKG	1 cut(s)	601
MspI	CCGG	2 cut(s)	583, 1145
MspR9I	CCNGG	3 cut(s)	583, 591, 1509
Mva1269I	GAATGC	3 cut(s)	505, 664, 693
MvaI	CCWGG	2 cut(s)	591, 1509
MvnI	CGCG	2 cut(s)	381, 601
MwoI	GCNNNNNNNGC	1 cut(s)	15
NciI	CCSGG	1 cut(s)	583
NdeII	GATC	8 cut(s)	91, 238, 841, 1111, 1135, 1189, 1744, 1891
NlaIII	CATG	5 cut(s)	737, 1290, 1381, 1677, 1688
NlaIV	GGNNCC	6 cut(s)	150, 324, 432, 1018, 1273, 1506
NmuCI	GTSAC	6 cut(s)	291, 1147, 1236, 1256, 1294, 1985
NspI	RCATGY	1 cut(s)	1677
PacI	TTAATTAA	1 cut(s)	1248
PcsI	WCGNNNNNNNCGW	2 cut(s)	583, 686
PctI	GAATGC	3 cut(s)	505, 664, 693
PdmI	GAANNNNTTC	1 cut(s)	254
PfeI	GAWTC	4 cut(s)	443, 559, 709, 728
PkrI	GCNGC	4 cut(s)	116, 1500, 1528, 1699
PleI	GAGTC	5 cut(s)	5, 87, 1526, 1697, 1928
PmaCI	CACGTG	2 cut(s)	244, 578
PmlI	CACGTG	2 cut(s)	244, 578
PpsI	GAGTC	5 cut(s)	5, 87, 1526, 1697, 1928
Ppu21I	YACGTR	3 cut(s)	244, 578, 1410
PpuMI	RGGWCCY	1 cut(s)	1511
PshAI	GACNNNNGTC	1 cut(s)	1809
Psp124BI	GAGCTC	1 cut(s)	89
Psp5II	RGGWCCY	1 cut(s)	1511
Psp6I	CCWGG	2 cut(s)	589, 1507
PspCI	CACGTG	2 cut(s)	244, 578
PspGI	CCWGG	2 cut(s)	589, 1507
PspN4I	GGNNCC	6 cut(s)	150, 324, 432, 1018, 1273, 1506
PspPI	GGNCC	4 cut(s)	148, 431, 1017, 1511
PspPPI	RGGWCCY	1 cut(s)	1511
PstI	CTGCAG	2 cut(s)	1503, 1662
PstNI	CAGNNNCTG	1 cut(s)	1514
PsuI	RGATCY	1 cut(s)	841
RsaI	GTAC	1 cut(s)	1980
RsaNI	GTAC	1 cut(s)	1979
RseI	CAYNNNNRTG	1 cut(s)	304
SacI	GAGCTC	1 cut(s)	89
SacII	CCGCGG	1 cut(s)	602
SalI	GTCGAC	1 cut(s)	98
SatI	GCNGC	4 cut(s)	115, 1499, 1527, 1698
Sau3AI	GATC	8 cut(s)	91, 238, 841, 1111, 1135, 1189, 1744, 1891
Sau96I	GGNCC	4 cut(s)	148, 431, 1017, 1511
ScaI	AGTACT	1 cut(s)	1980
SchI	GAGTC	5 cut(s)	5, 88, 1526, 1697, 1928
ScrFI	CCNGG	3 cut(s)	583, 591, 1509
SduI	GDGCHC	5 cut(s)	26, 57, 89, 583, 1055
SexAI	ACCWGGT	1 cut(s)	1507
SfaNI	GCATC	4 cut(s)	308, 1654, 1684, 1717
SfcI	CTRYAG	2 cut(s)	1499, 1658
Sfr303I	CCGCGG	1 cut(s)	602
SgrBI	CCGCGG	1 cut(s)	602
SinI	GGWCC	4 cut(s)	148, 431, 1017, 1511
SmiMI	CAYNNNNRTG	1 cut(s)	304
SmlI	CTYRAG	2 cut(s)	203, 672
SmoI	CTYRAG	2 cut(s)	203, 672
SsiI	CCGC	6 cut(s)	16, 278, 599, 601, 1526, 1697
SspMI	CTAG	7 cut(s)	95, 845, 905, 984, 999, 1814, 1919
SstI	GAGCTC	1 cut(s)	89
StyD4I	CCNGG	3 cut(s)	581, 589, 1507
StyI	CCWWGG	2 cut(s)	129, 366
TaaI	ACNGT	4 cut(s)	1300, 1343, 1565, 1711
TaiI	ACGT	6 cut(s)	246, 440, 580, 683, 1232, 1412
TaqI	TCGA	3 cut(s)	99, 171, 302
TaqII	GACCGA	1 cut(s)	448
TatI	WGTACW	1 cut(s)	1978
TauI	GCSGC	2 cut(s)	1529, 1700
TfiI	GAWTC	4 cut(s)	443, 559, 709, 728
TscAI	CASTG	5 cut(s)	265, 615, 1326, 1674, 1716
TseFI	GTSAC	6 cut(s)	291, 1147, 1236, 1256, 1294, 1985
TseI	GCWGC	2 cut(s)	114, 1498
Tsp45I	GTSAC	6 cut(s)	291, 1147, 1236, 1256, 1294, 1985
TspDTI	ATGAA	8 cut(s)	501, 621, 660, 750, 1013, 1275, 1843, 1858
TspGWI	ACGGA	1 cut(s)	330
TspRI	CASTG	5 cut(s)	265, 615, 1326, 1674, 1716
VpaK11BI	GGWCC	4 cut(s)	148, 431, 1017, 1511
XapI	RAATTY	4 cut(s)	594, 895, 926, 1307
XbaI	TCTAGA	2 cut(s)	844, 1813
XceI	RCATGY	1 cut(s)	1677
XmiI	GTMKAC	2 cut(s)	99, 1932
XmnI	GAANNNNTTC	1 cut(s)	254
XspI	CTAG	7 cut(s)	95, 845, 905, 984, 999, 1814, 1919
ZrmI	AGTACT	1 cut(s)	1980

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.