Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0003629

Physical Location & Seq

Genomic Coordinates Forward (+)

60085604 .. 60090939

Gene Structure 5336 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG413300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGAGTCGGAGCTCCGATCTAGTCGACCCCCTTCTGGGCTGCTCTTTCTTCCACAAGGCCAAGTTCTCGTCGGACCCTTCCAAGCCCTTCGACTTCGACCACGACCTCCAAGCCATCAACCTCCACCTCAAGTCCACCACGGCCTCACTATCTGGTCTTCAAGATCTGGCGAAGAACATTTCAAGTGGCAGTTCCGCTATTCCGCAGTCTGACATGTCACAAGCATTGAAATGTGTAAACGGAGTGGTTCCTGCAAATGATGTGGACAATCACCGAGAGAGAAGACCTGCCTTGGGTCTTAAACGCGCTCGTTTTTCTTTGAAACCTAATTCCAGTCAACCTGATATTACTTTGGGACCGACGTTTGATTCTAAAAAATACAAAGACCCCAACGACTACTTCGCTTTCTATGAAAGAAATGAGAATGCTAAAAGAGAACTGGAGAAGCAGATGGGTGGTGCTGTATTTGATGGAGATAAGCAGAATCCATCTCCAATTACACGTGCCCGGCGACCAGGAATTCCGCGGAGGTCAGTGAAATACAAGCATCGCATTTCATCGCTTTACAATGAAATCGTTGAGAATGCTATATCCACTCAAGAGACGTCTGAAACGAGCATTCTCAGTCCATTGAATCACAGCTCACAAACAGAATCCCATGAAAAAGTTGCATTGGAGGAGATGGATTTAGCTGGTTCAAAAGTTAAGGAAGACCACAAATGGAATAATGACATTCTGGACGGGCTATTGTCTCAGCCTACTGAAGATCTAGAAGGGGATGGCGCTTTCCATCTTTTAAAGGAGAGCTTGCACATTAAAAATTTTGAACTAGAGGATATATGCCTTCCAGAATTCCCAGATACCAAAAAGGCTGATTTGAAGTCTTCAAGAAAAACCTTGCCAAACCCTAGACCTGTGAAACCTAGACAGCGGGCAGAAGGGTCCATTCATTTATCTTCTCCAACACCACCAAAAAGCCCTTTGGCTTCGTTGTCTTTATTGAGTAAGAGAAGTTTAGTGTCAATTCCATCAAATGATCCATTTTCAGCTTTTGCTATTGATCAGTTTCCGGTGACAAATCCTTCTTCAGTTGAGAATAGAGAAAAACAATCTGATCGGATTGACATTGCAGAGCAGAAAATGATTTCTGATACGTTGAAGTCACCTTTAATTAAACAAAGTGACAAGATTGAAGGTGCCAAGACAGGTTCATGTGAGGTGACTGTTAAGGAATTCACTAATGCAGTGAAAAGGTCTAAGAGGAACAGTTTAAGTAAACTTGGTGTTGGTTATGATGTTGACATGGAGGAGGAGATTGGAGGCAGTAAGGTTACGAGTGAGACATTAAGTATGCCTGAAGATGATACAGATACTTGGGCAAATGGGGTTGATAATAGCGACAAGATACAGGTGGAAGACAAGCTGCAGGAACCAGGTCCTGAAGTTAATGCGGCAGACTCAACTTTGGAAAAGCTTAACGGTGCTCACAGTCAAGTTGCTGATGATGTGATTGATAGTGATGAGATACAAGAGGAAGACAAAGTGCAGGAAGCAATGCCTGAACATAATGAGCAAGACAAACTGCAGGATGCAGTGGCATGTGCAGAGCATGGATTTGATGCGGCAGACTCAACAGTGGAAAACTTGAATGATGCTCCAAGTCAATTAGATCAATTACACTCAGCTCCAGTTGAGGAGCAATCAAGGGATAGTCTCTCCAGAAACCCTGACTTTGGTCTAGAGAAGCAGAATGAGGTTAATAATTTGCAGGCTATTTTCATTTGCTACTCTTTCATATTATTTGTTGATTGTCTTGATCTTTTAGTGCCTGTTGGCACACTTCTAGCATTTGTAGTAGACTCATCTTCTGTTGTGTTTCCTCTAAATAATGGGTTTTTGTTAGTACTCTGTCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000819 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006996 GO:0007049 GO:0007059 GO:0007080 GO:0007127 GO:0008150 GO:0008608 GO:0009987 GO:0016043 GO:0019237 GO:0022402 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032991 GO:0034508 GO:0034622 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051316 GO:0051321 GO:0051382 GO:0051383 GO:0051455 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0061982 GO:0065003 GO:0065004 GO:0070013 GO:0070925 GO:0071824 GO:0071840 GO:0097159 GO:0098687 GO:0098813 GO:0140013 GO:0140014 GO:1901363 GO:1903046 GO:1903047 GO:1990837

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

638

Amino Acids

70.42

Weight (kDa)

4.94

Isoelectric Point (pI)

57.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15660
fragaria_vesca	FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920 FvH4_6g30920
malus_domestica	MD09G1215000.v1.1 MD17G1197700.v1.1
prunus_persica	Prupe.3G073700_v2.0.a1 Prupe.3G073700_v2.0.a1 Prupe.3G073700_v2.0.a1 Prupe.3G073700_v2.0.a1 Prupe.3G073700_v2.0.a1
pyrus_communis	pycom09g13190 pycom17g20260
rosa_chinensis	RchiOBHm_Chr2g0137511
rosa_laevigata	RLG00000019658 RLG00000019659
rosa_multiflora	Rmu_sc0000765.1_g000007
rosa_roxburghii	Rroxscaffold_2G00107040
rosa_rugosa	Rorug02G0342700 Rorug02G0342800 Rorug02G0342900 Rorug02G0343000 Rorug02G0343000 Rorug02G0343000
rosa_samantha	Rh2AG390600 Rh2BG398300 Rh2CG377800 Rh2DG413300
rosa_wichuraiana	Rw2G032000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	608
Acc36I	ACCTGC	1 cut(s)	295
AccB1I	GGYRCC	1 cut(s)	1196
AccI	GTMKAC	2 cut(s)	24, 1857
AccII	CGCG	2 cut(s)	306, 526
AciI	CCGC	7 cut(s)	195, 203, 524, 526, 931, 1451, 1622
AclWI	GGATC	1 cut(s)	1031
AcsI	RAATTY	4 cut(s)	519, 820, 851, 1232
AcuI	CTGAAG	4 cut(s)	783, 1071, 1377, 1461
AcvI	CACGTG	1 cut(s)	503
AcyI	GRCGYC	1 cut(s)	605
AfaI	GTAC	1 cut(s)	1905
AfiI	CCNNNNNNNGG	4 cut(s)	34, 35, 293, 1733
AflIII	ACRYGT	2 cut(s)	213, 500
AjnI	CCWGG	2 cut(s)	514, 1432
AjuI	GAANNNNNNNTTGG	2 cut(s)	383, 415
AluBI	AGCT	8 cut(s)	12, 642, 692, 807, 1049, 1423, 1474, 1685
AluI	AGCT	8 cut(s)	12, 642, 692, 807, 1049, 1423, 1474, 1685
Alw21I	GWGCWC	2 cut(s)	14, 1486
Alw26I	GTCTC	4 cut(s)	596, 756, 1334, 1718
AlwI	GGATC	1 cut(s)	1031
AlwNI	CAGNNNCTG	1 cut(s)	1439
AoxI	GGCC	2 cut(s)	57, 141
ApeKI	GCWGC	2 cut(s)	39, 1423
ApoI	RAATTY	4 cut(s)	519, 820, 851, 1232
AspLEI	GCGC	2 cut(s)	308, 785
AspS9I	GGNCC	4 cut(s)	73, 356, 942, 1436
AsuC2I	CCSGG	1 cut(s)	508
AsuHPI	GGTGA	4 cut(s)	263, 1084, 1155, 1231
AvaII	GGWCC	4 cut(s)	73, 356, 942, 1436
BaeGI	GKGCMC	1 cut(s)	508
BanI	GGYRCC	1 cut(s)	1196
BanII	GRGCYC	1 cut(s)	14
BbrPI	CACGTG	1 cut(s)	503
BbsI	GAAGAC	6 cut(s)	149, 289, 717, 876, 1422, 1542
Bbv12I	GWGCWC	2 cut(s)	14, 1486
BbvI	GCAGC	2 cut(s)	26, 1410
BccI	CCATC	8 cut(s)	122, 445, 464, 496, 676, 773, 798, 1036
BceAI	ACGGC	1 cut(s)	156
BciT130I	CCWGG	2 cut(s)	516, 1434
BclI	TGATCA	1 cut(s)	1060
BcnI	CCSGG	1 cut(s)	508
BcoDI	GTCTC	4 cut(s)	596, 756, 1334, 1718
BfaI	CTAG	7 cut(s)	20, 770, 830, 909, 924, 1739, 1844
BfmI	CTRYAG	2 cut(s)	1424, 1583
BfoI	RGCGCY	1 cut(s)	786
BfuAI	ACCTGC	1 cut(s)	295
BglII	AGATCT	2 cut(s)	163, 766
BisI	GCNGC	4 cut(s)	40, 1424, 1452, 1623
BlsI	GCNGC	4 cut(s)	41, 1425, 1453, 1624
BmcAI	AGTACT	1 cut(s)	1905
Bme1390I	CCNGG	3 cut(s)	508, 516, 1434
Bme18I	GGWCC	4 cut(s)	73, 356, 942, 1436
BmgT120I	GGNCC	4 cut(s)	73, 356, 942, 1436
BmiI	GGNNCC	6 cut(s)	75, 249, 357, 943, 1198, 1431
BmrFI	CCNGG	3 cut(s)	508, 516, 1434
BmsI	GCATC	4 cut(s)	556, 1579, 1609, 1642
BoxI	GACNNNNGTC	1 cut(s)	1734
BpiI	GAAGAC	6 cut(s)	149, 289, 717, 876, 1422, 1542
BpmI	CTGGAG	3 cut(s)	461, 1671, 1702
BpuEI	CTTGAG	2 cut(s)	113, 582
BpuMI	CCSGG	1 cut(s)	508
BsaAI	YACGTR	1 cut(s)	503
BsaHI	GRCGYC	1 cut(s)	605
BsaJI	CCNNGG	3 cut(s)	138, 291, 524
BsaWI	WCCGGW	1 cut(s)	1069
Bsc4I	CCNNNNNNNGG	4 cut(s)	34, 35, 293, 1733
Bse1I	ACTGG	3 cut(s)	333, 444, 1688
Bse3DI	GCAATG	2 cut(s)	1125, 1560
BseBI	CCWGG	2 cut(s)	516, 1434
BseDI	CCNNGG	3 cut(s)	138, 291, 524
BseGI	GGATG	2 cut(s)	784, 1594
BseLI	CCNNNNNNNGG	4 cut(s)	34, 35, 293, 1733
BseMI	GCAATG	2 cut(s)	1125, 1560
BseMII	CTCAG	3 cut(s)	637, 767, 1695
BseNI	ACTGG	3 cut(s)	333, 444, 1688
BseRI	GAGGAG	4 cut(s)	692, 1322, 1325, 1709
BseSI	GKGCMC	1 cut(s)	508
BseXI	GCAGC	2 cut(s)	26, 1410
BsgI	GTGCAG	2 cut(s)	1565, 1623
Bsh1236I	CGCG	2 cut(s)	306, 526
BshFI	GGCC	2 cut(s)	59, 143
BshNI	GGYRCC	1 cut(s)	1196
BsiHKAI	GWGCWC	2 cut(s)	14, 1486
BsiSI	CCGG	2 cut(s)	508, 1070
BslFI	GGGAC	1 cut(s)	369
BslI	CCNNNNNNNGG	4 cut(s)	34, 35, 293, 1733
BsmAI	GTCTC	4 cut(s)	596, 756, 1334, 1718
BsmBI	CGTCTC	1 cut(s)	596
BsmFI	GGGAC	1 cut(s)	369
BsmI	GAATGC	3 cut(s)	430, 589, 618
BsnI	GGCC	2 cut(s)	59, 143
Bsp1286I	GDGCHC	3 cut(s)	14, 508, 1486
Bsp143I	GATC	8 cut(s)	16, 163, 766, 1036, 1060, 1114, 1669, 1816
BspACI	CCGC	7 cut(s)	195, 203, 524, 526, 931, 1451, 1622
BspANI	GGCC	2 cut(s)	59, 143
BspCNI	CTCAG	3 cut(s)	636, 766, 1694
BspFNI	CGCG	2 cut(s)	306, 526
BspLI	GGNNCC	6 cut(s)	75, 249, 357, 943, 1198, 1431
BspMAI	CTGCAG	2 cut(s)	1428, 1587
BspMI	ACCTGC	1 cut(s)	295
BspPI	GGATC	1 cut(s)	1031
BspT107I	GGYRCC	1 cut(s)	1196
BsrDI	GCAATG	2 cut(s)	1125, 1560
BsrI	ACTGG	3 cut(s)	333, 444, 1688
BssECI	CCNNGG	3 cut(s)	138, 291, 524
BssMI	GATC	8 cut(s)	16, 163, 766, 1036, 1060, 1114, 1669, 1816
BssNI	GRCGYC	1 cut(s)	605
BssT1I	CCWWGG	1 cut(s)	291
Bst2UI	CCWGG	2 cut(s)	516, 1434
Bst4CI	ACNGT	5 cut(s)	1225, 1268, 1481, 1490, 1636
BstACI	GRCGYC	1 cut(s)	605
BstBAI	YACGTR	1 cut(s)	503
BstC8I	GCNNGC	3 cut(s)	809, 933, 1770
BstDEI	CTNAG	4 cut(s)	623, 753, 1257, 1681
BstDSI	CCRYGG	2 cut(s)	138, 524
BstF5I	GGATG	2 cut(s)	784, 1594
BstFNI	CGCG	2 cut(s)	306, 526
BstH2I	RGCGCY	1 cut(s)	786
BstHHI	GCGC	2 cut(s)	308, 785
BstKTI	GATC	8 cut(s)	19, 166, 769, 1039, 1063, 1117, 1672, 1819
BstMAI	GTCTC	4 cut(s)	596, 756, 1334, 1718
BstMBI	GATC	8 cut(s)	16, 163, 766, 1036, 1060, 1114, 1669, 1816
BstNI	CCWGG	2 cut(s)	516, 1434
BstNSI	RCATGY	2 cut(s)	217, 1602
BstPAI	GACNNNNGTC	1 cut(s)	1734
BstSCI	CCNGG	3 cut(s)	506, 514, 1432
BstSFI	CTRYAG	2 cut(s)	1424, 1583
BstSLI	GKGCMC	1 cut(s)	508
BstUI	CGCG	2 cut(s)	306, 526
BstV1I	GCAGC	2 cut(s)	26, 1410
BstV2I	GAAGAC	6 cut(s)	149, 289, 717, 876, 1422, 1542
BstX2I	RGATCY	2 cut(s)	163, 766
BstYI	RGATCY	2 cut(s)	163, 766
BsuRI	GGCC	2 cut(s)	59, 143
BtgI	CCRYGG	2 cut(s)	138, 524
BtgZI	GCGATG	2 cut(s)	533, 543
BtsCI	GGATG	2 cut(s)	784, 1594
BtsI	GCAGTG	2 cut(s)	1251, 1599
BtsIMutI	CAGTG	4 cut(s)	540, 1251, 1599, 1641
BveI	ACCTGC	1 cut(s)	295
Cac8I	GCNNGC	3 cut(s)	809, 933, 1770
CaiI	CAGNNNCTG	1 cut(s)	1439
CfoI	GCGC	2 cut(s)	308, 785
Cfr13I	GGNCC	4 cut(s)	73, 356, 942, 1436
Cfr42I	CCGCGG	1 cut(s)	527
CsiI	ACCWGGT	1 cut(s)	1432
Csp6I	GTAC	1 cut(s)	1904
CspCI	CAANNNNNGTGG	2 cut(s)	243, 278
CviAII	CATG	6 cut(s)	214, 659, 1212, 1303, 1599, 1610
CviQI	GTAC	1 cut(s)	1904
DdeI	CTNAG	4 cut(s)	623, 753, 1257, 1681
DpnI	GATC	8 cut(s)	18, 165, 768, 1038, 1062, 1116, 1671, 1818
DpnII	GATC	8 cut(s)	16, 163, 766, 1036, 1060, 1114, 1669, 1816
DraI	TTTAAA	1 cut(s)	798
Ecl136II	GAGCTC	1 cut(s)	12
Eco130I	CCWWGG	1 cut(s)	291
Eco24I	GRGCYC	1 cut(s)	14
Eco47I	GGWCC	4 cut(s)	73, 356, 942, 1436
Eco53kI	GAGCTC	1 cut(s)	12
Eco57I	CTGAAG	4 cut(s)	783, 1071, 1377, 1461
Eco72I	CACGTG	1 cut(s)	503
EcoICRI	GAGCTC	1 cut(s)	12
EcoO109I	RGGNCCY	1 cut(s)	1436
EcoRI	GAATTC	3 cut(s)	519, 851, 1232
EcoRII	CCWGG	2 cut(s)	514, 1432
EcoT14I	CCWWGG	1 cut(s)	291
EcoT38I	GRGCYC	1 cut(s)	14
ErhI	CCWWGG	1 cut(s)	291
Esp3I	CGTCTC	1 cut(s)	596
FaeI	CATG	6 cut(s)	217, 662, 1215, 1306, 1602, 1613
FalI	AAGNNNNNCTT	2 cut(s)	791, 823
FaqI	GGGAC	1 cut(s)	369
FatI	CATG	6 cut(s)	213, 658, 1211, 1302, 1598, 1609
FauI	CCCGC	1 cut(s)	924
FbaI	TGATCA	1 cut(s)	1060
FblI	GTMKAC	2 cut(s)	24, 1857
Fnu4HI	GCNGC	4 cut(s)	40, 1424, 1452, 1623
FokI	GGATG	2 cut(s)	791, 1601
FriOI	GRGCYC	1 cut(s)	14
Fsp4HI	GCNGC	4 cut(s)	40, 1424, 1452, 1623
FspBI	CTAG	7 cut(s)	20, 770, 830, 909, 924, 1739, 1844
GlaI	GCGC	2 cut(s)	307, 784
GluI	GCNGC	4 cut(s)	40, 1424, 1452, 1623
GsuI	CTGGAG	3 cut(s)	461, 1671, 1702
HaeII	RGCGCY	1 cut(s)	786
HaeIII	GGCC	2 cut(s)	59, 143
HapII	CCGG	2 cut(s)	508, 1070
HhaI	GCGC	2 cut(s)	308, 785
Hin1I	GRCGYC	1 cut(s)	605
Hin1II	CATG	6 cut(s)	217, 662, 1215, 1306, 1602, 1613
Hin6I	GCGC	2 cut(s)	306, 783
HinP1I	GCGC	2 cut(s)	306, 783
HincII	GTYRAC	3 cut(s)	25, 338, 1300
HindII	GTYRAC	3 cut(s)	25, 338, 1300
HindIII	AAGCTT	1 cut(s)	1472
HinfI	GANTC	8 cut(s)	4, 368, 484, 634, 653, 1457, 1628, 1859
HpaII	CCGG	2 cut(s)	508, 1070
HphI	GGTGA	4 cut(s)	263, 1084, 1155, 1231
Hpy166II	GTNNAC	8 cut(s)	25, 135, 238, 265, 338, 1277, 1300, 1858
Hpy188I	TCNGA	8 cut(s)	9, 16, 73, 211, 610, 1114, 1119, 1150
Hpy8I	GTNNAC	8 cut(s)	25, 135, 238, 265, 338, 1277, 1300, 1858
Hpy99I	CGWCG	2 cut(s)	73, 364
HpyAV	CCTTC	8 cut(s)	41, 87, 97, 767, 854, 932, 1092, 1187
HpyCH4III	ACNGT	5 cut(s)	1225, 1268, 1481, 1490, 1636
HpyCH4IV	ACGT	4 cut(s)	362, 502, 605, 1154
HpyF3I	CTNAG	4 cut(s)	623, 753, 1257, 1681
HpySE526I	ACGT	4 cut(s)	362, 502, 605, 1154
Hsp92I	GRCGYC	1 cut(s)	605
Hsp92II	CATG	6 cut(s)	217, 662, 1215, 1306, 1602, 1613
HspAI	GCGC	2 cut(s)	306, 783
Ksp22I	TGATCA	1 cut(s)	1060
KspI	CCGCGG	1 cut(s)	527
Kzo9I	GATC	8 cut(s)	16, 163, 766, 1036, 1060, 1114, 1669, 1816
LmnI	GCTCC	5 cut(s)	9, 17, 1660, 1690, 1696
Lsp1109I	GCAGC	2 cut(s)	26, 1410
LweI	GCATC	4 cut(s)	556, 1579, 1609, 1642
MabI	ACCWGGT	1 cut(s)	1432
MaeI	CTAG	7 cut(s)	20, 770, 830, 909, 924, 1739, 1844
MaeII	ACGT	4 cut(s)	362, 502, 605, 1154
MaeIII	GTNAC	7 cut(s)	216, 1072, 1161, 1181, 1219, 1330, 1910
MalI	GATC	8 cut(s)	18, 165, 768, 1038, 1062, 1116, 1671, 1818
MboI	GATC	8 cut(s)	16, 163, 766, 1036, 1060, 1114, 1669, 1816
MflI	RGATCY	2 cut(s)	163, 766
MhlI	GDGCHC	3 cut(s)	14, 508, 1486
MlyI	GAGTC	4 cut(s)	13, 1451, 1622, 1853
MmeI	TCCRAC	2 cut(s)	51, 986
MslI	CAYNNNNRTG	1 cut(s)	229
MspA1I	CMGCKG	2 cut(s)	526, 931
MspI	CCGG	2 cut(s)	508, 1070
MspR9I	CCNGG	3 cut(s)	508, 516, 1434
Mva1269I	GAATGC	3 cut(s)	430, 589, 618
MvaI	CCWGG	2 cut(s)	516, 1434
MvnI	CGCG	2 cut(s)	306, 526
NciI	CCSGG	1 cut(s)	508
NdeII	GATC	8 cut(s)	16, 163, 766, 1036, 1060, 1114, 1669, 1816
NlaIII	CATG	6 cut(s)	217, 662, 1215, 1306, 1602, 1613
NlaIV	GGNNCC	6 cut(s)	75, 249, 357, 943, 1198, 1431
NmuCI	GTSAC	6 cut(s)	216, 1072, 1161, 1181, 1219, 1910
NspI	RCATGY	2 cut(s)	217, 1602
PacI	TTAATTAA	1 cut(s)	1173
PciI	ACATGT	1 cut(s)	213
PcsI	WCGNNNNNNNCGW	2 cut(s)	508, 611
PctI	GAATGC	3 cut(s)	430, 589, 618
PfeI	GAWTC	4 cut(s)	368, 484, 634, 653
PkrI	GCNGC	4 cut(s)	41, 1425, 1453, 1624
PleI	GAGTC	4 cut(s)	12, 1451, 1622, 1853
PmaCI	CACGTG	1 cut(s)	503
PmlI	CACGTG	1 cut(s)	503
PpsI	GAGTC	4 cut(s)	12, 1451, 1622, 1853
Ppu21I	YACGTR	1 cut(s)	503
PpuMI	RGGWCCY	1 cut(s)	1436
PscI	ACATGT	1 cut(s)	213
PshAI	GACNNNNGTC	1 cut(s)	1734
Psp124BI	GAGCTC	1 cut(s)	14
Psp5II	RGGWCCY	1 cut(s)	1436
Psp6I	CCWGG	2 cut(s)	514, 1432
PspCI	CACGTG	1 cut(s)	503
PspGI	CCWGG	2 cut(s)	514, 1432
PspN4I	GGNNCC	6 cut(s)	75, 249, 357, 943, 1198, 1431
PspPI	GGNCC	4 cut(s)	73, 356, 942, 1436
PspPPI	RGGWCCY	1 cut(s)	1436
PstI	CTGCAG	2 cut(s)	1428, 1587
PstNI	CAGNNNCTG	1 cut(s)	1439
PsuI	RGATCY	2 cut(s)	163, 766
RsaI	GTAC	1 cut(s)	1905
RsaNI	GTAC	1 cut(s)	1904
RseI	CAYNNNNRTG	1 cut(s)	229
SacI	GAGCTC	1 cut(s)	14
SacII	CCGCGG	1 cut(s)	527
SalI	GTCGAC	1 cut(s)	23
SatI	GCNGC	4 cut(s)	40, 1424, 1452, 1623
Sau3AI	GATC	8 cut(s)	16, 163, 766, 1036, 1060, 1114, 1669, 1816
Sau96I	GGNCC	4 cut(s)	73, 356, 942, 1436
ScaI	AGTACT	1 cut(s)	1905
SchI	GAGTC	4 cut(s)	13, 1451, 1622, 1853
ScrFI	CCNGG	3 cut(s)	508, 516, 1434
SduI	GDGCHC	3 cut(s)	14, 508, 1486
SexAI	ACCWGGT	1 cut(s)	1432
SfaNI	GCATC	4 cut(s)	556, 1579, 1609, 1642
SfcI	CTRYAG	2 cut(s)	1424, 1583
Sfr303I	CCGCGG	1 cut(s)	527
SgrBI	CCGCGG	1 cut(s)	527
SinI	GGWCC	4 cut(s)	73, 356, 942, 1436
SmiMI	CAYNNNNRTG	1 cut(s)	229
SmlI	CTYRAG	2 cut(s)	128, 597
SmoI	CTYRAG	2 cut(s)	128, 597
SsiI	CCGC	7 cut(s)	195, 203, 524, 526, 931, 1451, 1622
SspMI	CTAG	7 cut(s)	20, 770, 830, 909, 924, 1739, 1844
SstI	GAGCTC	1 cut(s)	14
StyD4I	CCNGG	3 cut(s)	506, 514, 1432
StyI	CCWWGG	1 cut(s)	291
TaaI	ACNGT	5 cut(s)	1225, 1268, 1481, 1490, 1636
TaiI	ACGT	4 cut(s)	365, 505, 608, 1157
TaqI	TCGA	3 cut(s)	24, 90, 96
TaqII	GACCGA	1 cut(s)	373
TatI	WGTACW	1 cut(s)	1903
TauI	GCSGC	2 cut(s)	1454, 1625
TfiI	GAWTC	4 cut(s)	368, 484, 634, 653
TscAI	CASTG	4 cut(s)	540, 1251, 1599, 1641
TseFI	GTSAC	6 cut(s)	216, 1072, 1161, 1181, 1219, 1910
TseI	GCWGC	2 cut(s)	39, 1423
Tsp45I	GTSAC	6 cut(s)	216, 1072, 1161, 1181, 1219, 1910
TspDTI	ATGAA	8 cut(s)	426, 546, 585, 675, 938, 1200, 1768, 1783
TspGWI	ACGGA	1 cut(s)	255
TspRI	CASTG	4 cut(s)	540, 1251, 1599, 1641
VpaK11BI	GGWCC	4 cut(s)	73, 356, 942, 1436
XapI	RAATTY	4 cut(s)	519, 820, 851, 1232
XbaI	TCTAGA	2 cut(s)	769, 1738
XceI	RCATGY	2 cut(s)	217, 1602
XmiI	GTMKAC	2 cut(s)	24, 1857
XspI	CTAG	7 cut(s)	20, 770, 830, 909, 924, 1739, 1844
ZraI	GACGTC	1 cut(s)	606
ZrmI	AGTACT	1 cut(s)	1905

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.