Prupe.3G075200_v2.0.a1

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
5511243 .. 5519459
8217 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G075200.7

Sequence Viewer

Length: 1455 bp
ATGTCTGCAAACATGAAGAGAGAAAATATGGTCACCTCCAATGTTAGAGAGCTTCCTGGAAGAATAACACGTGCTCGAGCTGCTTCACTTCATACATCTGGACAAATGCCCCCAATAAAACCACCCACACAACAGAGCCAGAAGCAGGCTGTGCGAACAAATCCAAAAAGAGCTGCCACGGATGAGAACAGTACAAAAGCTGCTGGTAATGCATGTATGCAACGTAAGAGGAGGGCTGTGCTTCAGGATGTGACCAATGCTTGCTGTAAACCTTCGTACGGGAGCTGCTTCAATGCAACTAAAATTCAGGTTAAGAACAGCAAGCCAGCTAAAAAGGGTCAGGCAAAGCTGACAAAAATGGTCCCTTCCGTTGCGCTAGATTCAAAAACGGAGGCTGTGCAGGGAATTATAAAACCAGAACTAACATCCGACTTACATTCAATTAATTTGGAAGATGGAAACATGCTTATGTGGTCAACTAAGGATGTGAAAGATGTTCGTCAGTCAGAAAATCAGAGTTCTGGATCTAGAGTGGCTTCAAAAGTCCAAAGCCCTTCAAATAAAGCGCATGATGCTAGCCTTTCAGCAGACATGGTTCCATCGAGCAACCAACATATTGTTAACATTGATGCAGATTACAAGGATCCTCAATTGTGTAGCCTCTATGCCCCTGATATCTACAACCATTTACGTGTTGCAGAGCTTGACCGAAGGCCAAATGCTACTTTTATGGAAACAATACAGCAAGATATCACCAAAAGTATGAGAGGGATTTTAATTGATTGGCTTGTAGAGGTGTCAGAGGAATATAAGTTGGTGGCAGATACGCTTTACCTCACAGTCTATCTCATCGATTGGTTTCTCTGTCATAATTACACTGAAAGGACTAGACTTCAATTGCTTGGCATCACTTGCATGCTAATTGCCTCGAAATATGAAGAAATTTGTGCACCGCGTGTGGAAGAACTTTGTTTCATGACAGACAACACTTACTCGAAAGAGGAGGTATTGAAAATGGAGAGTCAAGTATTGAAGTATTTTGGGTTTCAACTTTTTGCACCAACAACTAAAACTTTCCTCAGGAGATTTCTTCGAGCAGCACAAGCTTCTTATAAGACTCCTAGCCTTGAACTGGAGTACTTGGCCAATTATCTTGCTGAACTAACTTTGGTTGACTATAGCTTCTTGAATTTCCTTCCTTCCGTCATTGCTGCATCAGCTGTTTTTCTTTCCAAATGGACCTTAGATCAGTCCAGCCATCCATGGAATCCAATACTAGAACACTATACCCGTTACACGCCATTGGATTTGAAGATCACAGTTCTTGCTCTGCAAGATTTACAGTTGAACACCAATGGTTGTCCTCTGAGTGCTGTACGCATGAAGTATAGGCACCAAAAGTTTAAATCCGTAGCGGGTTTGTCATCCCCAAAACTCCTTGAAACACTATTTTGA

Protein Analysis

485

Amino Acids

54.62

Weight (kDa)

9.07

Isoelectric Point (pI)

47.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 410, 1113
AccB1I GGYRCC 1 cut(s) 1392
AccII CGCG 1 cut(s) 955
AciI CCGC 2 cut(s) 953, 1415
AclWI GGATC 3 cut(s) 532, 638, 651
AcoI YGGCCR 1 cut(s) 1143
AcsI RAATTY 3 cut(s) 303, 942, 1189
AcuI CTGAAG 1 cut(s) 227
AcvI CACGTG 1 cut(s) 71
AdeI CACNNNGTG 1 cut(s) 956
AfaI GTAC 4 cut(s) 193, 278, 1139, 1377
AfiI CCNNNNNNNGG 3 cut(s) 145, 278, 1132
AflIII ACRYGT 2 cut(s) 68, 691
AjnI CCWGG 1 cut(s) 55
Alw21I GWGCWC 2 cut(s) 76, 952
Alw44I GTGCAC 1 cut(s) 948
AlwI GGATC 3 cut(s) 532, 638, 651
Ama87I CYCGRG 1 cut(s) 75
AoxI GGCC 2 cut(s) 713, 1143
ApaLI GTGCAC 1 cut(s) 948
ApeKI GCWGC 6 cut(s) 80, 173, 200, 285, 1097, 1211
ApoI RAATTY 3 cut(s) 303, 942, 1189
AseI ATTAAT 1 cut(s) 444
AspLEI GCGC 2 cut(s) 376, 568
AspS9I GGNCC 2 cut(s) 361, 1239
AsuHPI GGTGA 2 cut(s) 25, 745
AsuNHI GCTAGC 1 cut(s) 575
AvaI CYCGRG 1 cut(s) 75
AvaII GGWCC 2 cut(s) 361, 1239
AxyI CCTNAGG 1 cut(s) 1079
BaeGI GKGCMC 1 cut(s) 952
BalI TGGCCA 1 cut(s) 1145
BamHI GGATCC 1 cut(s) 643
BanI GGYRCC 1 cut(s) 1392
BbrPI CACGTG 1 cut(s) 71
Bbv12I GWGCWC 2 cut(s) 76, 952
BbvI GCAGC 6 cut(s) 67, 160, 187, 272, 1109, 1198
BccI CCATC 3 cut(s) 449, 607, 1266
BciT130I CCWGG 1 cut(s) 57
BfaI CTAG 6 cut(s) 377, 528, 576, 888, 1122, 1277
BfmI CTRYAG 1 cut(s) 1177
BisI GCNGC 6 cut(s) 81, 174, 201, 286, 1098, 1212
BlsI GCNGC 6 cut(s) 82, 175, 202, 287, 1099, 1213
BmcAI AGTACT 1 cut(s) 1139
Bme1390I CCNGG 1 cut(s) 57
Bme18I GGWCC 2 cut(s) 361, 1239
BmeT110I CYCGRG 1 cut(s) 75
BmgT120I GGNCC 2 cut(s) 361, 1239
BmiI GGNNCC 4 cut(s) 363, 597, 645, 1394
BmrFI CCNGG 1 cut(s) 57
BmsI GCATC 4 cut(s) 562, 619, 915, 1223
BmtI GCTAGC 1 cut(s) 579
BpmI CTGGAG 1 cut(s) 1154
Bsa29I ATCGAT 1 cut(s) 852
BsaAI YACGTR 2 cut(s) 71, 692
BsaJI CCNNGG 2 cut(s) 177, 1262
Bsc4I CCNNNNNNNGG 3 cut(s) 145, 278, 1132
Bse1I ACTGG 1 cut(s) 1137
Bse21I CCTNAGG 1 cut(s) 1079
Bse3DI GCAATG 1 cut(s) 1206
BseBI CCWGG 1 cut(s) 57
BseCI ATCGAT 1 cut(s) 852
BseDI CCNNGG 2 cut(s) 177, 1262
BseGI GGATG 6 cut(s) 187, 253, 425, 490, 1258, 1424
BseLI CCNNNNNNNGG 3 cut(s) 145, 278, 1132
BseMI GCAATG 1 cut(s) 1206
BseMII CTCAG 2 cut(s) 1093, 1358
BseNI ACTGG 1 cut(s) 1137
BseRI GAGGAG 2 cut(s) 244, 1016
BseSI GKGCMC 1 cut(s) 952
BseXI GCAGC 6 cut(s) 67, 160, 187, 272, 1109, 1198
BsgI GTGCAG 1 cut(s) 419
Bsh1236I CGCG 1 cut(s) 955
BshFI GGCC 2 cut(s) 715, 1145
BshNI GGYRCC 1 cut(s) 1392
BshVI ATCGAT 1 cut(s) 852
BsiHKAI GWGCWC 2 cut(s) 76, 952
BsiHKCI CYCGRG 1 cut(s) 75
BsiWI CGTACG 1 cut(s) 276
BslFI GGGAC 1 cut(s) 347
BslI CCNNNNNNNGG 3 cut(s) 145, 278, 1132
BsmFI GGGAC 1 cut(s) 347
BsnI GGCC 2 cut(s) 715, 1145
BsoBI CYCGRG 1 cut(s) 75
Bsp1286I GDGCHC 2 cut(s) 76, 952
Bsp143I GATC 4 cut(s) 524, 643, 1246, 1314
Bsp19I CCATGG 1 cut(s) 1262
BspACI CCGC 2 cut(s) 953, 1415
BspANI GGCC 2 cut(s) 715, 1145
BspCNI CTCAG 2 cut(s) 1092, 1359
BspDI ATCGAT 1 cut(s) 852
BspFNI CGCG 1 cut(s) 955
BspHI TCATGA 1 cut(s) 975
BspLI GGNNCC 4 cut(s) 363, 597, 645, 1394
BspOI GCTAGC 1 cut(s) 579
BspPI GGATC 3 cut(s) 532, 638, 651
BspT107I GGYRCC 1 cut(s) 1392
BsrDI GCAATG 1 cut(s) 1206
BsrI ACTGG 1 cut(s) 1137
BssECI CCNNGG 2 cut(s) 177, 1262
BssMI GATC 4 cut(s) 524, 643, 1246, 1314
BssT1I CCWWGG 1 cut(s) 1262
Bst2UI CCWGG 1 cut(s) 57
Bst4CI ACNGT 4 cut(s) 191, 841, 1321, 1344
Bst6I CTCTTC 1 cut(s) 11
BstAPI GCANNNNNTGC 2 cut(s) 151, 912
BstBAI YACGTR 2 cut(s) 71, 692
BstC8I GCNNGC 6 cut(s) 147, 262, 323, 327, 577, 917
BstDEI CTNAG 4 cut(s) 480, 1079, 1243, 1367
BstDSI CCRYGG 2 cut(s) 177, 1262
BstEII GGTNACC 1 cut(s) 31
BstF5I GGATG 6 cut(s) 187, 253, 425, 490, 1258, 1424
BstFNI CGCG 1 cut(s) 955
BstHHI GCGC 2 cut(s) 376, 568
BstKTI GATC 4 cut(s) 527, 646, 1249, 1317
BstMBI GATC 4 cut(s) 524, 643, 1246, 1314
BstMWI GCNNNNNNNGC 7 cut(s) 80, 151, 209, 572, 912, 1103, 1217
BstNI CCWGG 1 cut(s) 57
BstNSI RCATGY 3 cut(s) 216, 466, 919
BstPI GGTNACC 1 cut(s) 31
BstSCI CCNGG 1 cut(s) 55
BstSFI CTRYAG 1 cut(s) 1177
BstSLI GKGCMC 1 cut(s) 952
BstUI CGCG 1 cut(s) 955
BstV1I GCAGC 6 cut(s) 67, 160, 187, 272, 1109, 1198
BstX2I RGATCY 2 cut(s) 524, 643
BstYI RGATCY 2 cut(s) 524, 643
Bsu15I ATCGAT 1 cut(s) 852
Bsu36I CCTNAGG 1 cut(s) 1079
BsuRI GGCC 2 cut(s) 715, 1145
BsuTUI ATCGAT 1 cut(s) 852
BtgI CCRYGG 2 cut(s) 177, 1262
BtsCI GGATG 6 cut(s) 187, 253, 425, 490, 1258, 1424
BtsIMutI CAGTG 1 cut(s) 876
Cac8I GCNNGC 6 cut(s) 147, 262, 323, 327, 577, 917
CciI TCATGA 1 cut(s) 975
CfoI GCGC 2 cut(s) 376, 568
Cfr13I GGNCC 2 cut(s) 361, 1239
ClaI ATCGAT 1 cut(s) 852
Csp6I GTAC 4 cut(s) 192, 277, 1138, 1376
CviAII CATG 9 cut(s) 13, 213, 463, 569, 592, 916, 976, 1263, 1381
CviQI GTAC 4 cut(s) 192, 277, 1138, 1376
DdeI CTNAG 4 cut(s) 480, 1079, 1243, 1367
DpnI GATC 4 cut(s) 526, 645, 1248, 1316
DpnII GATC 4 cut(s) 524, 643, 1246, 1314
DraI TTTAAA 1 cut(s) 1405
DraIII CACNNNGTG 1 cut(s) 956
EaeI YGGCCR 1 cut(s) 1143
Eam1104I CTCTTC 1 cut(s) 11
EarI CTCTTC 1 cut(s) 11
Eco130I CCWWGG 1 cut(s) 1262
Eco32I GATATC 2 cut(s) 676, 751
Eco47I GGWCC 2 cut(s) 361, 1239
Eco57I CTGAAG 1 cut(s) 227
Eco72I CACGTG 1 cut(s) 71
Eco81I CCTNAGG 1 cut(s) 1079
Eco88I CYCGRG 1 cut(s) 75
Eco91I GGTNACC 1 cut(s) 31
EcoO65I GGTNACC 1 cut(s) 31
EcoRII CCWGG 1 cut(s) 55
EcoRV GATATC 2 cut(s) 676, 751
EcoT14I CCWWGG 1 cut(s) 1262
EcoT22I ATGCAT 1 cut(s) 214
ErhI CCWWGG 1 cut(s) 1262
FaeI CATG 9 cut(s) 16, 216, 466, 572, 595, 919, 979, 1266, 1384
FaqI GGGAC 1 cut(s) 347
FatI CATG 9 cut(s) 12, 212, 462, 568, 591, 915, 975, 1262, 1380
FauI CCCGC 1 cut(s) 1408
Fnu4HI GCNGC 6 cut(s) 81, 174, 201, 286, 1098, 1212
FokI GGATG 6 cut(s) 194, 260, 412, 497, 1245, 1411
Fsp4HI GCNGC 6 cut(s) 81, 174, 201, 286, 1098, 1212
FspBI CTAG 6 cut(s) 377, 528, 576, 888, 1122, 1277
GlaI GCGC 2 cut(s) 375, 567
GluI GCNGC 6 cut(s) 81, 174, 201, 286, 1098, 1212
GsuI CTGGAG 1 cut(s) 1154
HaeIII GGCC 2 cut(s) 715, 1145
HhaI GCGC 2 cut(s) 376, 568
Hin1II CATG 9 cut(s) 16, 216, 466, 572, 595, 919, 979, 1266, 1384
Hin6I GCGC 2 cut(s) 374, 566
HinP1I GCGC 2 cut(s) 374, 566
HincII GTYRAC 3 cut(s) 477, 622, 1174
HindII GTYRAC 3 cut(s) 477, 622, 1174
HindIII AAGCTT 1 cut(s) 1104
HinfI GANTC 4 cut(s) 380, 1021, 1117, 1267
HpaI GTTAAC 1 cut(s) 622
HphI GGTGA 2 cut(s) 25, 745
Hpy166II GTNNAC 5 cut(s) 269, 477, 622, 950, 1174
Hpy188I TCNGA 5 cut(s) 430, 508, 516, 802, 1368
Hpy188III TCNNGA 7 cut(s) 99, 245, 522, 528, 976, 1081, 1186
Hpy8I GTNNAC 5 cut(s) 269, 477, 622, 950, 1174
HpyAV CCTTC 6 cut(s) 282, 375, 564, 705, 1205, 1209
HpyCH4III ACNGT 4 cut(s) 191, 841, 1321, 1344
HpyCH4IV ACGT 3 cut(s) 70, 223, 691
HpyF10VI GCNNNNNNNGC 7 cut(s) 80, 151, 209, 572, 912, 1103, 1217
HpyF3I CTNAG 4 cut(s) 480, 1079, 1243, 1367
HpySE526I ACGT 3 cut(s) 70, 223, 691
Hsp92II CATG 9 cut(s) 16, 216, 466, 572, 595, 919, 979, 1266, 1384
HspAI GCGC 2 cut(s) 374, 566
KspAI GTTAAC 1 cut(s) 622
Kzo9I GATC 4 cut(s) 524, 643, 1246, 1314
LmnI GCTCC 1 cut(s) 282
Lsp1109I GCAGC 6 cut(s) 67, 160, 187, 272, 1109, 1198
LweI GCATC 4 cut(s) 562, 619, 915, 1223
MaeI CTAG 6 cut(s) 377, 528, 576, 888, 1122, 1277
MaeII ACGT 3 cut(s) 70, 223, 691
MaeIII GTNAC 3 cut(s) 31, 250, 1292
MalI GATC 4 cut(s) 526, 645, 1248, 1316
MboI GATC 4 cut(s) 524, 643, 1246, 1314
MboII GAAGA 7 cut(s) 28, 72, 464, 950, 974, 1082, 1324
MfeI CAATTG 2 cut(s) 650, 896
MflI RGATCY 2 cut(s) 524, 643
MhlI GDGCHC 2 cut(s) 76, 952
MlsI TGGCCA 1 cut(s) 1145
MluNI TGGCCA 1 cut(s) 1145
MlyI GAGTC 2 cut(s) 1030, 1111
MmeI TCCRAC 1 cut(s) 453
Mox20I TGGCCA 1 cut(s) 1145
Mph1103I ATGCAT 1 cut(s) 214
MscI TGGCCA 1 cut(s) 1145
MseI TTAA 5 cut(s) 312, 444, 621, 776, 1404
MslI CAYNNNNRTG 3 cut(s) 467, 690, 914
Msp20I TGGCCA 1 cut(s) 1145
MspA1I CMGCKG 1 cut(s) 1220
MspR9I CCNGG 1 cut(s) 57
MunI CAATTG 2 cut(s) 650, 896
MvaI CCWGG 1 cut(s) 57
MvnI CGCG 1 cut(s) 955
MwoI GCNNNNNNNGC 7 cut(s) 80, 151, 209, 572, 912, 1103, 1217
NcoI CCATGG 1 cut(s) 1262
NdeII GATC 4 cut(s) 524, 643, 1246, 1314
NheI GCTAGC 1 cut(s) 575
NlaIII CATG 9 cut(s) 16, 216, 466, 572, 595, 919, 979, 1266, 1384
NlaIV GGNNCC 4 cut(s) 363, 597, 645, 1394
NmuCI GTSAC 2 cut(s) 31, 250
NsiI ATGCAT 1 cut(s) 214
NspI RCATGY 3 cut(s) 216, 466, 919
PaeI GCATGC 1 cut(s) 919
PaeR7I CTCGAG 1 cut(s) 75
PagI TCATGA 1 cut(s) 975
PfeI GAWTC 2 cut(s) 380, 1267
Pfl23II CGTACG 1 cut(s) 276
PfoI TCCNGGA 1 cut(s) 55
PkrI GCNGC 6 cut(s) 82, 175, 202, 287, 1099, 1213
PleI GAGTC 2 cut(s) 1029, 1111
PmaCI CACGTG 1 cut(s) 71
PmlI CACGTG 1 cut(s) 71
PpsI GAGTC 2 cut(s) 1029, 1111
Ppu21I YACGTR 2 cut(s) 71, 692
PshBI ATTAAT 1 cut(s) 444
PsiI TTATAA 2 cut(s) 410, 1113
Psp6I CCWGG 1 cut(s) 55
PspCI CACGTG 1 cut(s) 71
PspEI GGTNACC 1 cut(s) 31
PspGI CCWGG 1 cut(s) 55
PspLI CGTACG 1 cut(s) 276
PspN4I GGNNCC 4 cut(s) 363, 597, 645, 1394
PspPI GGNCC 2 cut(s) 361, 1239
PspXI VCTCGAGB 1 cut(s) 75
PsuI RGATCY 2 cut(s) 524, 643
PvuII CAGCTG 1 cut(s) 1220
RsaI GTAC 4 cut(s) 193, 278, 1139, 1377
RsaNI GTAC 4 cut(s) 192, 277, 1138, 1376
RseI CAYNNNNRTG 3 cut(s) 467, 690, 914
SaqAI TTAA 5 cut(s) 312, 444, 621, 776, 1404
SatI GCNGC 6 cut(s) 81, 174, 201, 286, 1098, 1212
Sau3AI GATC 4 cut(s) 524, 643, 1246, 1314
Sau96I GGNCC 2 cut(s) 361, 1239
ScaI AGTACT 1 cut(s) 1139
SchI GAGTC 2 cut(s) 1030, 1111
ScrFI CCNGG 1 cut(s) 57
SduI GDGCHC 2 cut(s) 76, 952
SfaNI GCATC 4 cut(s) 562, 619, 915, 1223
SfcI CTRYAG 1 cut(s) 1177
Sfr274I CTCGAG 1 cut(s) 75
SinI GGWCC 2 cut(s) 361, 1239
SlaI CTCGAG 1 cut(s) 75
SmiMI CAYNNNNRTG 3 cut(s) 467, 690, 914
SmlI CTYRAG 1 cut(s) 75
SmoI CTYRAG 1 cut(s) 75
SphI GCATGC 1 cut(s) 919
SsiI CCGC 2 cut(s) 953, 1415
SspMI CTAG 6 cut(s) 377, 528, 576, 888, 1122, 1277
StyD4I CCNGG 1 cut(s) 55
StyI CCWWGG 1 cut(s) 1262
TaaI ACNGT 4 cut(s) 191, 841, 1321, 1344
TaiI ACGT 3 cut(s) 73, 226, 694
TaqI TCGA 6 cut(s) 76, 602, 852, 929, 995, 1093
TaqII GACCGA 1 cut(s) 723
TatI WGTACW 2 cut(s) 191, 1137
TfiI GAWTC 2 cut(s) 380, 1267
Tru1I TTAA 5 cut(s) 312, 444, 621, 776, 1404
Tru9I TTAA 5 cut(s) 312, 444, 621, 776, 1404
TscAI CASTG 1 cut(s) 883
TseFI GTSAC 2 cut(s) 31, 250
TseI GCWGC 6 cut(s) 80, 173, 200, 285, 1097, 1211
Tsp45I GTSAC 2 cut(s) 31, 250
TspDTI ATGAA 5 cut(s) 29, 80, 951, 964, 1397
TspGWI ACGGA 5 cut(s) 194, 358, 404, 1192, 1399
TspRI CASTG 1 cut(s) 883
VneI GTGCAC 1 cut(s) 948
VpaK11BI GGWCC 2 cut(s) 361, 1239
VspI ATTAAT 1 cut(s) 444
XapI RAATTY 3 cut(s) 303, 942, 1189
XbaI TCTAGA 1 cut(s) 527
XceI RCATGY 3 cut(s) 216, 466, 919
XhoI CTCGAG 1 cut(s) 75
XspI CTAG 6 cut(s) 377, 528, 576, 888, 1122, 1277
ZrmI AGTACT 1 cut(s) 1139
Zsp2I ATGCAT 1 cut(s) 214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.