pycom17g20330

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
18536526 .. 18542309
5784 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g20330.4

Sequence Viewer

Length: 1443 bp
ATGAAGAGAGAAAATATGGTCACTGCAAATGTTAGGGAGCTTTCTGGTAGAATAACACGTGCTCGAGCTGCTGCACTTCATACATCTGGACATATTCCCCCACCAAAACCACCCACACAACAGAGTCAGAAGCAGGCTTTGCGAACAAATTCAAAGAGATCTGCCACGGATGAGAATAATACAAAAGCTGCTGGTAATGCATGCATCCAACACAAGAGGAGGGCAGTACTTCAAGATGTGACCAACGCTCTCTGTAAACCTTCATATGGAAACTGCATCAATGCAACTAAAATTCAGGCTAAAAAGAGTAAGCCAGCTAAAAAGGGTCATGCAAAGCTGACGGAAATGGCCCCTTCTGTTGCTGTAGATTCAAAAACCAATGTTGTCCAGGGAACAGTAAAACCAGAAATTAAATCAGATGAATTTTGCCGCTCAATCAATGTGGAAGATGGCAACATACTTGTGCGGCCAACTAAGGATGTGAAAGATGTTAGTCAGTTGGAGAATCAGAGTTCTGGAGTGAATCCAAAGTTCCAAAGCCCTGCGTATAAAGCAGATAATGGTAGTCTTTCAGCGGACATGGTAACATCAGGCAACCAGCATATTGTTAACATTGATGCGGATTACAAGGACCCTCTATTGTGTAGCCTCTATGCCCCTGACATCTATAACCATTTATCTGTTGCAGAGCTTGAAAGAAGGCCATATGCTGGTTTTATGGAAACTATACAGCAAGACATCACCAAAACTATGAGGGGGATTTTAATTGATTGGCTTGTAGAGGTGTCAGAGGAATATAAGGTGGTGCCAGATACGCTTTACCTCACAGTTTATCTCATCGATTGGTTTCTCTGTCACAATTATATTGAAAGGAATAGACTTCAATTGCTTGGCATCACTTGCTTGCTGATTGCCTCGAAATATGAAGAAATTTGTGCACCACGTGTTGAGGAACTTTGTTTCATGACAGACAACACTTACTCGAGAGAGGAGGTACTGAAAATGGAGAGTCAAGTACTGAAGTATTTTGGTTTTCAACTTTTTGCACCAACTACAAAAACGTTCCTCAGGAGATTTCTTCGAGCAGCACAAGCTTCTTATAAGAGTCCTAGCCTTGAACTGGAGTACTTGGCCAATTATCTTGCTGAACTAACTTTGGTCGACTATAGCTTCTTGAATTTCCTTCCATCTGTCATTGCTGCATCAGCTGTTTTTCTTTCCAAATGGACCTTAGATCAGTCCAGCCACCCATGGAATCCAATACTCGAATACTATACCCGTTACAAGCCATTGGATTTGAAGATCACAGTTCTTGCTTTGCAAGAATTACAGTTGAACACTAGTGGTTGTCCTCTGAGTGCCGTGCGCATGAAGTATAGACACCAAAAGTACAAATCTGTGGCAGGTTTGTCATCCCCAAAACTCCTTGAAACGCTATTTTGA

Protein Analysis

481

Amino Acids

54.15

Weight (kDa)

8.98

Isoelectric Point (pI)

46.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1101
Acc16I TGCGCA 1 cut(s) 1367
Acc36I ACCTGC 1 cut(s) 1394
AccB1I GGYRCC 1 cut(s) 805
AccB7I CCANNNNNTGG 1 cut(s) 710
AccBSI CCGCTC 1 cut(s) 432
AccI GTMKAC 1 cut(s) 1161
AciI CCGC 4 cut(s) 430, 466, 575, 620
AclI AACGTT 1 cut(s) 1061
AcoI YGGCCR 2 cut(s) 467, 1131
AcsI RAATTY 5 cut(s) 148, 291, 422, 930, 1177
AcuI CTGAAG 1 cut(s) 1040
AcvI CACGTG 2 cut(s) 59, 944
AdeI CACNNNGTG 1 cut(s) 944
AfaI GTAC 5 cut(s) 228, 996, 1017, 1127, 1391
AfiI CCNNNNNNNGG 3 cut(s) 266, 710, 1120
AflIII ACRYGT 2 cut(s) 56, 943
AhlI ACTAGT 1 cut(s) 1340
AjnI CCWGG 1 cut(s) 387
AluBI AGCT 9 cut(s) 40, 68, 188, 317, 337, 691, 1094, 1170, 1208
AluI AGCT 9 cut(s) 40, 68, 188, 317, 337, 691, 1094, 1170, 1208
Alw21I GWGCWC 2 cut(s) 64, 940
Alw44I GTGCAC 1 cut(s) 936
Ama87I CYCGRG 2 cut(s) 63, 982
AoxI GGCC 4 cut(s) 348, 467, 701, 1131
ApaLI GTGCAC 1 cut(s) 936
ApeKI GCWGC 5 cut(s) 68, 71, 188, 1085, 1199
ApoI RAATTY 5 cut(s) 148, 291, 422, 930, 1177
Asp700I GAANNNNTTC 1 cut(s) 148
AspLEI GCGC 1 cut(s) 1368
AspS9I GGNCC 3 cut(s) 349, 631, 1227
AsuHPI GGTGA 1 cut(s) 733
AvaI CYCGRG 2 cut(s) 63, 982
AvaII GGWCC 2 cut(s) 631, 1227
AxyI CCTNAGG 1 cut(s) 1067
BaeGI GKGCMC 1 cut(s) 940
BalI TGGCCA 1 cut(s) 1133
BanI GGYRCC 1 cut(s) 805
BbrPI CACGTG 2 cut(s) 59, 944
Bbv12I GWGCWC 2 cut(s) 64, 940
BbvI GCAGC 5 cut(s) 55, 58, 175, 1097, 1186
BccI CCATC 2 cut(s) 443, 1195
BceAI ACGGC 1 cut(s) 1346
BciT130I CCWGG 1 cut(s) 389
BcuI ACTAGT 1 cut(s) 1340
BfaI CTAG 2 cut(s) 1110, 1341
BfmI CTRYAG 2 cut(s) 363, 1165
BfuAI ACCTGC 1 cut(s) 1394
BglII AGATCT 1 cut(s) 158
BisI GCNGC 7 cut(s) 69, 72, 189, 430, 467, 1086, 1200
BlsI GCNGC 7 cut(s) 70, 73, 190, 431, 468, 1087, 1201
BmcAI AGTACT 3 cut(s) 228, 1017, 1127
Bme1390I CCNGG 1 cut(s) 389
Bme18I GGWCC 2 cut(s) 631, 1227
BmeT110I CYCGRG 2 cut(s) 63, 982
BmgT120I GGNCC 3 cut(s) 349, 631, 1227
BmiI GGNNCC 3 cut(s) 351, 633, 807
BmrFI CCNGG 1 cut(s) 389
BmsI GCATC 5 cut(s) 213, 285, 607, 903, 1211
BpmI CTGGAG 2 cut(s) 537, 1142
Bsa29I ATCGAT 1 cut(s) 840
BsaAI YACGTR 2 cut(s) 59, 944
BsaJI CCNNGG 3 cut(s) 165, 388, 1250
Bsc4I CCNNNNNNNGG 3 cut(s) 266, 710, 1120
Bse1I ACTGG 1 cut(s) 1125
Bse21I CCTNAGG 1 cut(s) 1067
Bse3DI GCAATG 1 cut(s) 1194
BseBI CCWGG 1 cut(s) 389
BseCI ATCGAT 1 cut(s) 840
BseDI CCNNGG 3 cut(s) 165, 388, 1250
BseGI GGATG 4 cut(s) 175, 204, 484, 1412
BseLI CCNNNNNNNGG 3 cut(s) 266, 710, 1120
BseMI GCAATG 1 cut(s) 1194
BseMII CTCAG 2 cut(s) 1081, 1346
BseNI ACTGG 1 cut(s) 1125
BseRI GAGGAG 2 cut(s) 232, 1004
BseSI GKGCMC 1 cut(s) 940
BseXI GCAGC 5 cut(s) 55, 58, 175, 1097, 1186
BsgI GTGCAG 1 cut(s) 57
BshFI GGCC 4 cut(s) 350, 469, 703, 1133
BshNI GGYRCC 1 cut(s) 805
BshVI ATCGAT 1 cut(s) 840
BsiHKAI GWGCWC 2 cut(s) 64, 940
BsiHKCI CYCGRG 2 cut(s) 63, 982
BslI CCNNNNNNNGG 3 cut(s) 266, 710, 1120
BsnI GGCC 4 cut(s) 350, 469, 703, 1133
BsoBI CYCGRG 2 cut(s) 63, 982
Bsp1286I GDGCHC 2 cut(s) 64, 940
Bsp143I GATC 3 cut(s) 158, 1234, 1302
Bsp19I CCATGG 1 cut(s) 1250
BspACI CCGC 4 cut(s) 430, 466, 575, 620
BspANI GGCC 4 cut(s) 350, 469, 703, 1133
BspCNI CTCAG 2 cut(s) 1080, 1347
BspDI ATCGAT 1 cut(s) 840
BspHI TCATGA 1 cut(s) 963
BspLI GGNNCC 3 cut(s) 351, 633, 807
BspMI ACCTGC 1 cut(s) 1394
BspT107I GGYRCC 1 cut(s) 805
BsrBI CCGCTC 1 cut(s) 432
BsrDI GCAATG 1 cut(s) 1194
BsrI ACTGG 1 cut(s) 1125
BssECI CCNNGG 3 cut(s) 165, 388, 1250
BssMI GATC 3 cut(s) 158, 1234, 1302
BssT1I CCWWGG 1 cut(s) 1250
Bst2UI CCWGG 1 cut(s) 389
Bst4CI ACNGT 4 cut(s) 397, 829, 1309, 1332
BstAPI GCANNNNNTGC 2 cut(s) 139, 900
BstBAI YACGTR 2 cut(s) 59, 944
BstC8I GCNNGC 4 cut(s) 135, 202, 315, 905
BstDEI CTNAG 4 cut(s) 474, 1067, 1231, 1355
BstDSI CCRYGG 2 cut(s) 165, 1250
BstF5I GGATG 4 cut(s) 175, 204, 484, 1412
BstHHI GCGC 1 cut(s) 1368
BstKTI GATC 3 cut(s) 161, 1237, 1305
BstMBI GATC 3 cut(s) 158, 1234, 1302
BstMWI GCNNNNNNNGC 8 cut(s) 68, 139, 197, 551, 814, 900, 1091, 1205
BstNI CCWGG 1 cut(s) 389
BstNSI RCATGY 1 cut(s) 204
BstSCI CCNGG 1 cut(s) 387
BstSFI CTRYAG 2 cut(s) 363, 1165
BstSLI GKGCMC 1 cut(s) 940
BstV1I GCAGC 5 cut(s) 55, 58, 175, 1097, 1186
BstX2I RGATCY 1 cut(s) 158
BstYI RGATCY 1 cut(s) 158
Bsu15I ATCGAT 1 cut(s) 840
Bsu36I CCTNAGG 1 cut(s) 1067
BsuRI GGCC 4 cut(s) 350, 469, 703, 1133
BsuTUI ATCGAT 1 cut(s) 840
BtgI CCRYGG 2 cut(s) 165, 1250
BtsCI GGATG 4 cut(s) 175, 204, 484, 1412
BtsI GCAGTG 1 cut(s) 21
BtsIMutI CAGTG 1 cut(s) 21
BveI ACCTGC 1 cut(s) 1394
Cac8I GCNNGC 4 cut(s) 135, 202, 315, 905
CciI TCATGA 1 cut(s) 963
CfoI GCGC 1 cut(s) 1368
Cfr13I GGNCC 3 cut(s) 349, 631, 1227
ClaI ATCGAT 1 cut(s) 840
Csp6I GTAC 5 cut(s) 227, 995, 1016, 1126, 1390
CspCI CAANNNNNGTGG 2 cut(s) 423, 458
CviAII CATG 6 cut(s) 201, 329, 580, 964, 1251, 1369
CviQI GTAC 5 cut(s) 227, 995, 1016, 1126, 1390
DdeI CTNAG 4 cut(s) 474, 1067, 1231, 1355
DpnI GATC 3 cut(s) 160, 1236, 1304
DpnII GATC 3 cut(s) 158, 1234, 1302
DraIII CACNNNGTG 1 cut(s) 944
EaeI YGGCCR 2 cut(s) 467, 1131
Eco130I CCWWGG 1 cut(s) 1250
Eco47I GGWCC 2 cut(s) 631, 1227
Eco57I CTGAAG 1 cut(s) 1040
Eco72I CACGTG 2 cut(s) 59, 944
Eco81I CCTNAGG 1 cut(s) 1067
Eco88I CYCGRG 2 cut(s) 63, 982
EcoO109I RGGNCCY 1 cut(s) 631
EcoRII CCWGG 1 cut(s) 387
EcoT14I CCWWGG 1 cut(s) 1250
EcoT22I ATGCAT 2 cut(s) 202, 206
ErhI CCWWGG 1 cut(s) 1250
FaeI CATG 6 cut(s) 204, 332, 583, 967, 1254, 1372
FatI CATG 6 cut(s) 200, 328, 579, 963, 1250, 1368
FauNDI CATATG 2 cut(s) 265, 706
FblI GTMKAC 1 cut(s) 1161
Fnu4HI GCNGC 7 cut(s) 69, 72, 189, 430, 467, 1086, 1200
FokI GGATG 4 cut(s) 182, 191, 491, 1399
Fsp4HI GCNGC 7 cut(s) 69, 72, 189, 430, 467, 1086, 1200
FspAI RTGCGCAY 1 cut(s) 1367
FspBI CTAG 2 cut(s) 1110, 1341
FspI TGCGCA 1 cut(s) 1367
GlaI GCGC 1 cut(s) 1367
GluI GCNGC 7 cut(s) 69, 72, 189, 430, 467, 1086, 1200
GsuI CTGGAG 2 cut(s) 537, 1142
HaeIII GGCC 4 cut(s) 350, 469, 703, 1133
HhaI GCGC 1 cut(s) 1368
Hin1II CATG 6 cut(s) 204, 332, 583, 967, 1254, 1372
Hin6I GCGC 1 cut(s) 1366
HinP1I GCGC 1 cut(s) 1366
HincII GTYRAC 2 cut(s) 610, 1162
HindII GTYRAC 2 cut(s) 610, 1162
HindIII AAGCTT 1 cut(s) 1092
HinfI GANTC 7 cut(s) 124, 368, 505, 523, 1009, 1105, 1255
HpaI GTTAAC 1 cut(s) 610
HphI GGTGA 1 cut(s) 733
Hpy166II GTNNAC 4 cut(s) 257, 610, 938, 1162
Hpy188I TCNGA 5 cut(s) 129, 418, 510, 790, 1356
Hpy188III TCNNGA 7 cut(s) 87, 233, 516, 964, 984, 1069, 1174
Hpy8I GTNNAC 4 cut(s) 257, 610, 938, 1162
HpyAV CCTTC 4 cut(s) 270, 363, 693, 1193
HpyCH4III ACNGT 4 cut(s) 397, 829, 1309, 1332
HpyCH4IV ACGT 3 cut(s) 58, 943, 1061
HpyF10VI GCNNNNNNNGC 8 cut(s) 68, 139, 197, 551, 814, 900, 1091, 1205
HpyF3I CTNAG 4 cut(s) 474, 1067, 1231, 1355
HpySE526I ACGT 3 cut(s) 58, 943, 1061
Hsp92II CATG 6 cut(s) 204, 332, 583, 967, 1254, 1372
HspAI GCGC 1 cut(s) 1366
KspAI GTTAAC 1 cut(s) 610
Kzo9I GATC 3 cut(s) 158, 1234, 1302
LmnI GCTCC 1 cut(s) 37
Lsp1109I GCAGC 5 cut(s) 55, 58, 175, 1097, 1186
LweI GCATC 5 cut(s) 213, 285, 607, 903, 1211
MaeI CTAG 2 cut(s) 1110, 1341
MaeII ACGT 3 cut(s) 58, 943, 1061
MaeIII GTNAC 5 cut(s) 19, 238, 583, 854, 1280
MalI GATC 3 cut(s) 160, 1236, 1304
MbiI CCGCTC 1 cut(s) 432
MboI GATC 3 cut(s) 158, 1234, 1302
MboII GAAGA 5 cut(s) 16, 458, 938, 1070, 1312
MfeI CAATTG 1 cut(s) 884
MflI RGATCY 1 cut(s) 158
MhlI GDGCHC 2 cut(s) 64, 940
MlsI TGGCCA 1 cut(s) 1133
MluNI TGGCCA 1 cut(s) 1133
MlyI GAGTC 3 cut(s) 133, 1018, 1114
MmeI TCCRAC 2 cut(s) 232, 480
Mox20I TGGCCA 1 cut(s) 1133
Mph1103I ATGCAT 2 cut(s) 202, 206
MroXI GAANNNNTTC 1 cut(s) 148
MscI TGGCCA 1 cut(s) 1133
MseI TTAA 3 cut(s) 411, 609, 764
MslI CAYNNNNRTG 1 cut(s) 461
Msp20I TGGCCA 1 cut(s) 1133
MspA1I CMGCKG 2 cut(s) 575, 1208
MspR9I CCNGG 1 cut(s) 389
MunI CAATTG 1 cut(s) 884
MvaI CCWGG 1 cut(s) 389
MwoI GCNNNNNNNGC 8 cut(s) 68, 139, 197, 551, 814, 900, 1091, 1205
NcoI CCATGG 1 cut(s) 1250
NdeI CATATG 2 cut(s) 265, 706
NdeII GATC 3 cut(s) 158, 1234, 1302
NlaIII CATG 6 cut(s) 204, 332, 583, 967, 1254, 1372
NlaIV GGNNCC 3 cut(s) 351, 633, 807
NmuCI GTSAC 3 cut(s) 19, 238, 854
NsbI TGCGCA 1 cut(s) 1367
NsiI ATGCAT 2 cut(s) 202, 206
NspI RCATGY 1 cut(s) 204
PaeI GCATGC 1 cut(s) 204
PaeR7I CTCGAG 2 cut(s) 63, 982
PagI TCATGA 1 cut(s) 963
PdmI GAANNNNTTC 1 cut(s) 148
PfeI GAWTC 4 cut(s) 368, 505, 523, 1255
PflMI CCANNNNNTGG 1 cut(s) 710
PkrI GCNGC 7 cut(s) 70, 73, 190, 431, 468, 1087, 1201
PleI GAGTC 3 cut(s) 132, 1017, 1113
PmaCI CACGTG 2 cut(s) 59, 944
PmlI CACGTG 2 cut(s) 59, 944
PpsI GAGTC 3 cut(s) 132, 1017, 1113
Ppu21I YACGTR 2 cut(s) 59, 944
PpuMI RGGWCCY 1 cut(s) 631
PsiI TTATAA 1 cut(s) 1101
Psp1406I AACGTT 1 cut(s) 1061
Psp5II RGGWCCY 1 cut(s) 631
Psp6I CCWGG 1 cut(s) 387
PspCI CACGTG 2 cut(s) 59, 944
PspGI CCWGG 1 cut(s) 387
PspN4I GGNNCC 3 cut(s) 351, 633, 807
PspPI GGNCC 3 cut(s) 349, 631, 1227
PspPPI RGGWCCY 1 cut(s) 631
PspXI VCTCGAGB 1 cut(s) 63
PsuI RGATCY 1 cut(s) 158
PvuII CAGCTG 1 cut(s) 1208
RsaI GTAC 5 cut(s) 228, 996, 1017, 1127, 1391
RsaNI GTAC 5 cut(s) 227, 995, 1016, 1126, 1390
RseI CAYNNNNRTG 1 cut(s) 461
SalI GTCGAC 1 cut(s) 1160
SaqAI TTAA 3 cut(s) 411, 609, 764
SatI GCNGC 7 cut(s) 69, 72, 189, 430, 467, 1086, 1200
Sau3AI GATC 3 cut(s) 158, 1234, 1302
Sau96I GGNCC 3 cut(s) 349, 631, 1227
ScaI AGTACT 3 cut(s) 228, 1017, 1127
SchI GAGTC 3 cut(s) 133, 1018, 1114
ScrFI CCNGG 1 cut(s) 389
SduI GDGCHC 2 cut(s) 64, 940
SfaNI GCATC 5 cut(s) 213, 285, 607, 903, 1211
SfcI CTRYAG 2 cut(s) 363, 1165
Sfr274I CTCGAG 2 cut(s) 63, 982
SinI GGWCC 2 cut(s) 631, 1227
SlaI CTCGAG 2 cut(s) 63, 982
SmiMI CAYNNNNRTG 1 cut(s) 461
SmlI CTYRAG 2 cut(s) 63, 982
SmoI CTYRAG 2 cut(s) 63, 982
SpeI ACTAGT 1 cut(s) 1340
SphI GCATGC 1 cut(s) 204
SsiI CCGC 4 cut(s) 430, 466, 575, 620
SspMI CTAG 2 cut(s) 1110, 1341
StyD4I CCNGG 1 cut(s) 387
StyI CCWWGG 1 cut(s) 1250
TaaI ACNGT 4 cut(s) 397, 829, 1309, 1332
TaiI ACGT 3 cut(s) 61, 946, 1064
TaqI TCGA 7 cut(s) 64, 840, 917, 983, 1081, 1161, 1266
TatI WGTACW 4 cut(s) 226, 1015, 1125, 1389
TauI GCSGC 2 cut(s) 432, 469
TfiI GAWTC 4 cut(s) 368, 505, 523, 1255
Tru1I TTAA 3 cut(s) 411, 609, 764
Tru9I TTAA 3 cut(s) 411, 609, 764
TscAI CASTG 1 cut(s) 28
TseFI GTSAC 3 cut(s) 19, 238, 854
TseI GCWGC 5 cut(s) 68, 71, 188, 1085, 1199
Tsp45I GTSAC 3 cut(s) 19, 238, 854
TspDTI ATGAA 7 cut(s) 17, 68, 252, 435, 939, 952, 1385
TspGWI ACGGA 2 cut(s) 182, 356
TspRI CASTG 1 cut(s) 28
Van91I CCANNNNNTGG 1 cut(s) 710
VneI GTGCAC 1 cut(s) 936
VpaK11BI GGWCC 2 cut(s) 631, 1227
XapI RAATTY 5 cut(s) 148, 291, 422, 930, 1177
XceI RCATGY 1 cut(s) 204
XhoI CTCGAG 2 cut(s) 63, 982
XmiI GTMKAC 1 cut(s) 1161
XmnI GAANNNNTTC 1 cut(s) 148
XspI CTAG 2 cut(s) 1110, 1341
ZrmI AGTACT 3 cut(s) 228, 1017, 1127
Zsp2I ATGCAT 2 cut(s) 202, 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.