Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0010688

Physical Location & Seq

Genomic Coordinates Reverse (-)

16001002 .. 16007939

Gene Structure 6938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G146300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1062 bp

ATGAATTTTGGTTTCGCCTGTGATGAGAACGATAAGATGGGCGGAGTGACCTCTTCGATTGCAGCCAAGTTCGCGTTTTTCCCGCCGAATCCGCCGTCGTACAGAGTCGTCCCCGACGAGTCGTGTGGAGGGGTACTGTACATTCCGGAGGTGCCTAGAAGGGACGACGTGGATGTGATCAAGCTCAGGACTCGCCGAGGGAATGAAATCGTGGCCGTACACGTCAAGCACCCCAAGGCCTCGGCTACTATGCTCTACTCCCATGGAAATGCTGCTGATTTGGGCCAGATGTTCGAGCTCTTCGTCGAATTGAGTGCTCGCCTTCGGGTTAATTTGATGGGCTATGATTACTCTGGCTACGGACAGTCAACTGGAAAGGCAACTGAATATAATACATATGCCGACATTGATGCAGCTTATAAATGCCTCAAGGAGAAATATGGGGTCAAAGATGAGCAACTAATATTATATGGCCAGTCTGTTGGTAGTGGCCCAACTGTTGATCTTGCATCACGTTTACCAACCTTGAGAGGTGTGGTGTTACACAGTCCTATTTTGTCTGGGCTGAGGGTTTTGTACCCTGTCAAGCGGACATACTGGTTTGATATTTACAAGAATATCGACAAAATGGCAATGGTGAACTGTCCTGTCCTGGTTATACATGGGACAGCAGATGAGGTTGTAGATTCGTCTCATGGGAAGCAACTTTGGGTGCTTTGCAAGGAAAAGTATGAACCTTTATGGCTTAGTGGAGGTGGACATTGCAATCTTGAGCTTTACCCAGAATTCATTAAACATCTAAAGAAATTTGTACATAGCCTTGGCAGGTCAAAATCAGCCACAAATGGTTCTAAAACAAGTACAGTAGATTCTGACGAATGCAAACCACCTGAAACCGGCACTTCAGATTCATCCGAATTGGGTTCTGATCTTCCGGAAGTTTCTAGAAACAGCTTAGATAGTCGACTTGAGAAGTCTAAAAAGCCAAACAAGCCTGAAAAGTCTCGGATGAGCACTGACCGAGTTGACACCTTTAAGAGAAGGAAGGGTTTAGTGTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FSH1 Hydrolase_4

Protein Analysis

354

Amino Acids

39.29

Weight (kDa)

8.64

Isoelectric Point (pI)

44.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010688)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66900 AT5G38220 AT5G38220
malus_domestica	MD09G1255000.v1.1 MD17G1247600.v1.1
prunus_persica	Prupe.3G146300_v2.0.a1
pyrus_communis	pycom17g24890
rosa_chinensis	RchiOBHm_Chr3g0495091
rosa_laevigata	RLG00000022643
rosa_multiflora	Rmu_co8340507.1_g000001 Rmu_sc0000340.1_g000019
rosa_roxburghii	Rroxscaffold_6G00390730
rosa_rugosa	Rorug03G0269900 Rorug03G0269900 Rorug03G0269900
rosa_samantha	Rh3AG319000 Rh3BG354000 Rh3DG353200
rosa_wichuraiana	Rw0G015010 Rw3G027810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	420
Acc36I	ACCTGC	1 cut(s)	816
AccB1I	GGYRCC	1 cut(s)	151
AccI	GTMKAC	1 cut(s)	964
AccII	CGCG	1 cut(s)	74
AccIII	TCCGGA	2 cut(s)	145, 934
AciI	CCGC	4 cut(s)	42, 83, 92, 589
AcoI	YGGCCR	2 cut(s)	213, 472
AcsI	RAATTY	3 cut(s)	4, 785, 806
AcuI	CTGAAG	1 cut(s)	888
AfaI	GTAC	7 cut(s)	101, 135, 140, 219, 578, 813, 862
AfiI	CCNNNNNNNGG	1 cut(s)	896
AflIII	ACRYGT	1 cut(s)	220
AjiI	CACGTC	2 cut(s)	169, 223
AjnI	CCWGG	1 cut(s)	651
AluBI	AGCT	5 cut(s)	184, 298, 416, 775, 954
AluI	AGCT	5 cut(s)	184, 298, 416, 775, 954
Alw21I	GWGCWC	3 cut(s)	300, 319, 1016
Alw26I	GTCTC	2 cut(s)	696, 1008
Aor13HI	TCCGGA	2 cut(s)	145, 934
AoxI	GGCC	5 cut(s)	213, 237, 283, 472, 490
ApeKI	GCWGC	3 cut(s)	62, 272, 413
ApoI	RAATTY	3 cut(s)	4, 785, 806
ArsI	GACNNNNNNTTYG	2 cut(s)	80, 112
AspS9I	GGNCC	2 cut(s)	283, 491
AsuHPI	GGTGA	1 cut(s)	649
BalI	TGGCCA	1 cut(s)	474
BanI	GGYRCC	1 cut(s)	151
BanII	GRGCYC	1 cut(s)	300
Bbv12I	GWGCWC	3 cut(s)	300, 319, 1016
BbvCI	CCTCAGC	1 cut(s)	566
BbvI	GCAGC	3 cut(s)	74, 259, 425
BccI	CCATC	2 cut(s)	31, 331
BceAI	ACGGC	2 cut(s)	79, 200
BcgI	CGANNNNNNTGC	4 cut(s)	296, 330, 392, 426
BciT130I	CCWGG	1 cut(s)	653
BclI	TGATCA	1 cut(s)	177
BcoDI	GTCTC	2 cut(s)	696, 1008
BfaI	CTAG	2 cut(s)	156, 945
BfuAI	ACCTGC	1 cut(s)	816
BisI	GCNGC	3 cut(s)	63, 273, 414
BlsI	GCNGC	3 cut(s)	64, 274, 415
Bme1390I	CCNGG	1 cut(s)	653
BmgBI	CACGTC	2 cut(s)	169, 223
BmgT120I	GGNCC	2 cut(s)	283, 491
BmiI	GGNNCC	1 cut(s)	153
BmrFI	CCNGG	1 cut(s)	653
BmsI	GCATC	2 cut(s)	400, 518
Bpu10I	CCTNAGC	2 cut(s)	185, 566
BpuEI	CTTGAG	4 cut(s)	413, 547, 791, 989
BsaJI	CCNNGG	5 cut(s)	196, 234, 240, 262, 820
BsaWI	WCCGGW	2 cut(s)	145, 934
Bsc4I	CCNNNNNNNGG	1 cut(s)	896
Bse118I	RCCGGY	1 cut(s)	896
Bse1I	ACTGG	3 cut(s)	376, 475, 602
Bse3DI	GCAATG	2 cut(s)	639, 760
BseAI	TCCGGA	2 cut(s)	145, 934
BseBI	CCWGG	1 cut(s)	653
BseDI	CCNNGG	5 cut(s)	196, 234, 240, 262, 820
BseGI	GGATG	3 cut(s)	178, 911, 1014
BseLI	CCNNNNNNNGG	1 cut(s)	896
BseMI	GCAATG	2 cut(s)	639, 760
BseMII	CTCAG	2 cut(s)	199, 557
BseNI	ACTGG	3 cut(s)	376, 475, 602
BseXI	GCAGC	3 cut(s)	74, 259, 425
Bsh1236I	CGCG	1 cut(s)	74
BshFI	GGCC	5 cut(s)	215, 239, 285, 474, 492
BshNI	GGYRCC	1 cut(s)	151
BsiHKAI	GWGCWC	3 cut(s)	300, 319, 1016
BsiSI	CCGG	3 cut(s)	146, 897, 935
BslFI	GGGAC	3 cut(s)	95, 176, 679
BslI	CCNNNNNNNGG	1 cut(s)	896
BsmAI	GTCTC	2 cut(s)	696, 1008
BsmBI	CGTCTC	1 cut(s)	696
BsmFI	GGGAC	3 cut(s)	95, 176, 679
BsmI	GAATGC	1 cut(s)	884
BsnI	GGCC	5 cut(s)	215, 239, 285, 474, 492
Bsp1286I	GDGCHC	3 cut(s)	300, 319, 1016
Bsp13I	TCCGGA	2 cut(s)	145, 934
Bsp1407I	TGTACA	2 cut(s)	138, 811
Bsp143I	GATC	3 cut(s)	177, 502, 928
Bsp19I	CCATGG	1 cut(s)	262
BspACI	CCGC	4 cut(s)	42, 83, 92, 589
BspANI	GGCC	5 cut(s)	215, 239, 285, 474, 492
BspCNI	CTCAG	2 cut(s)	198, 558
BspEI	TCCGGA	2 cut(s)	145, 934
BspFNI	CGCG	1 cut(s)	74
BspLI	GGNNCC	1 cut(s)	153
BspMI	ACCTGC	1 cut(s)	816
BspQI	GCTCTTC	1 cut(s)	305
BspT107I	GGYRCC	1 cut(s)	151
BsrDI	GCAATG	2 cut(s)	639, 760
BsrFI	RCCGGY	1 cut(s)	896
BsrGI	TGTACA	2 cut(s)	138, 811
BsrI	ACTGG	3 cut(s)	376, 475, 602
BssAI	RCCGGY	1 cut(s)	896
BssECI	CCNNGG	5 cut(s)	196, 234, 240, 262, 820
BssMI	GATC	3 cut(s)	177, 502, 928
BssT1I	CCWWGG	3 cut(s)	234, 262, 820
Bst2UI	CCWGG	1 cut(s)	653
Bst4CI	ACNGT	6 cut(s)	138, 366, 499, 548, 644, 865
Bst6I	CTCTTC	2 cut(s)	58, 305
BstAUI	TGTACA	2 cut(s)	138, 811
BstC8I	GCNNGC	1 cut(s)	319
BstDEI	CTNAG	4 cut(s)	185, 566, 746, 955
BstDSI	CCRYGG	1 cut(s)	262
BstF5I	GGATG	3 cut(s)	178, 911, 1014
BstFNI	CGCG	1 cut(s)	74
BstKTI	GATC	3 cut(s)	180, 505, 931
BstMAI	GTCTC	2 cut(s)	696, 1008
BstMBI	GATC	3 cut(s)	177, 502, 928
BstMWI	GCNNNNNNNGC	3 cut(s)	71, 91, 991
BstNI	CCWGG	1 cut(s)	653
BstSCI	CCNGG	1 cut(s)	651
BstUI	CGCG	1 cut(s)	74
BstV1I	GCAGC	3 cut(s)	74, 259, 425
BstXI	CCANNNNNNTGG	1 cut(s)	482
BsuRI	GGCC	5 cut(s)	215, 239, 285, 474, 492
BtgI	CCRYGG	1 cut(s)	262
BtrI	CACGTC	2 cut(s)	169, 223
BtsCI	GGATG	3 cut(s)	178, 911, 1014
BtsIMutI	CAGTG	1 cut(s)	1014
BveI	ACCTGC	1 cut(s)	816
Cac8I	GCNNGC	1 cut(s)	319
Cfr10I	RCCGGY	1 cut(s)	896
Cfr13I	GGNCC	2 cut(s)	283, 491
Csp6I	GTAC	7 cut(s)	100, 134, 139, 218, 577, 812, 861
CviAII	CATG	3 cut(s)	263, 662, 695
CviQI	GTAC	7 cut(s)	100, 134, 139, 218, 577, 812, 861
DdeI	CTNAG	4 cut(s)	185, 566, 746, 955
DpnI	GATC	3 cut(s)	179, 504, 930
DpnII	GATC	3 cut(s)	177, 502, 928
EaeI	YGGCCR	2 cut(s)	213, 472
Eam1104I	CTCTTC	2 cut(s)	58, 305
EarI	CTCTTC	2 cut(s)	58, 305
EciI	GGCGGA	2 cut(s)	57, 81
Ecl136II	GAGCTC	1 cut(s)	298
Eco130I	CCWWGG	3 cut(s)	234, 262, 820
Eco147I	AGGCCT	1 cut(s)	239
Eco24I	GRGCYC	1 cut(s)	300
Eco53kI	GAGCTC	1 cut(s)	298
Eco57I	CTGAAG	1 cut(s)	888
EcoICRI	GAGCTC	1 cut(s)	298
EcoRI	GAATTC	1 cut(s)	785
EcoRII	CCWGG	1 cut(s)	651
EcoT14I	CCWWGG	3 cut(s)	234, 262, 820
EcoT38I	GRGCYC	1 cut(s)	300
ErhI	CCWWGG	3 cut(s)	234, 262, 820
Esp3I	CGTCTC	1 cut(s)	696
FaeI	CATG	3 cut(s)	266, 665, 698
FaqI	GGGAC	3 cut(s)	95, 176, 679
FatI	CATG	3 cut(s)	262, 661, 694
FauI	CCCGC	1 cut(s)	90
FauNDI	CATATG	1 cut(s)	397
FbaI	TGATCA	1 cut(s)	177
FblI	GTMKAC	1 cut(s)	964
Fnu4HI	GCNGC	3 cut(s)	63, 273, 414
FokI	GGATG	3 cut(s)	185, 898, 1021
FriOI	GRGCYC	1 cut(s)	300
Fsp4HI	GCNGC	3 cut(s)	63, 273, 414
FspBI	CTAG	2 cut(s)	156, 945
GluI	GCNGC	3 cut(s)	63, 273, 414
HaeIII	GGCC	5 cut(s)	215, 239, 285, 474, 492
HapII	CCGG	3 cut(s)	146, 897, 935
Hin1II	CATG	3 cut(s)	266, 665, 698
HincII	GTYRAC	3 cut(s)	369, 965, 1027
HindII	GTYRAC	3 cut(s)	369, 965, 1027
HinfI	GANTC	7 cut(s)	88, 105, 119, 190, 686, 869, 908
HpaII	CCGG	3 cut(s)	146, 897, 935
HphI	GGTGA	1 cut(s)	649
Hpy166II	GTNNAC	7 cut(s)	220, 369, 518, 640, 758, 965, 1027
Hpy188I	TCNGA	5 cut(s)	874, 907, 916, 928, 1008
Hpy188III	TCNNGA	5 cut(s)	146, 187, 770, 935, 945
Hpy8I	GTNNAC	7 cut(s)	220, 369, 518, 640, 758, 965, 1027
Hpy99I	CGWCG	4 cut(s)	100, 119, 170, 308
HpyAV	CCTTC	4 cut(s)	153, 332, 1035, 1039
HpyCH4III	ACNGT	6 cut(s)	138, 366, 499, 548, 644, 865
HpyCH4IV	ACGT	3 cut(s)	168, 222, 514
HpyCH4V	TGCA	6 cut(s)	62, 413, 509, 720, 765, 882
HpyF10VI	GCNNNNNNNGC	3 cut(s)	71, 91, 991
HpyF3I	CTNAG	4 cut(s)	185, 566, 746, 955
HpySE526I	ACGT	3 cut(s)	168, 222, 514
Hsp92II	CATG	3 cut(s)	266, 665, 698
Kpn2I	TCCGGA	2 cut(s)	145, 934
Ksp22I	TGATCA	1 cut(s)	177
Kzo9I	GATC	3 cut(s)	177, 502, 928
LguI	GCTCTTC	1 cut(s)	305
Lsp1109I	GCAGC	3 cut(s)	74, 259, 425
LweI	GCATC	2 cut(s)	400, 518
MaeI	CTAG	2 cut(s)	156, 945
MaeII	ACGT	3 cut(s)	168, 222, 514
MaeIII	GTNAC	2 cut(s)	46, 540
MalI	GATC	3 cut(s)	179, 504, 930
MboI	GATC	3 cut(s)	177, 502, 928
MboII	GAAGA	3 cut(s)	45, 292, 923
MhlI	GDGCHC	3 cut(s)	300, 319, 1016
MlsI	TGGCCA	1 cut(s)	474
MluCI	AATT	6 cut(s)	4, 308, 331, 785, 806, 917
MluNI	TGGCCA	1 cut(s)	474
MlyI	GAGTC	3 cut(s)	114, 128, 184
Mox20I	TGGCCA	1 cut(s)	474
MroI	TCCGGA	2 cut(s)	145, 934
MscI	TGGCCA	1 cut(s)	474
MseI	TTAA	3 cut(s)	330, 792, 1035
MslI	CAYNNNNRTG	1 cut(s)	267
Msp20I	TGGCCA	1 cut(s)	474
MspI	CCGG	3 cut(s)	146, 897, 935
MspR9I	CCNGG	1 cut(s)	653
Mva1269I	GAATGC	1 cut(s)	884
MvaI	CCWGG	1 cut(s)	653
MvnI	CGCG	1 cut(s)	74
MwoI	GCNNNNNNNGC	3 cut(s)	71, 91, 991
NcoI	CCATGG	1 cut(s)	262
NdeI	CATATG	1 cut(s)	397
NdeII	GATC	3 cut(s)	177, 502, 928
NlaIII	CATG	3 cut(s)	266, 665, 698
NlaIV	GGNNCC	1 cut(s)	153
NmeAIII	GCCGAG	2 cut(s)	221, 221
NmuCI	GTSAC	1 cut(s)	46
PceI	AGGCCT	1 cut(s)	239
PciSI	GCTCTTC	1 cut(s)	305
PcsI	WCGNNNNNNNCGW	2 cut(s)	114, 300
PctI	GAATGC	1 cut(s)	884
PfeI	GAWTC	4 cut(s)	88, 686, 869, 908
PkrI	GCNGC	3 cut(s)	64, 274, 415
PleI	GAGTC	3 cut(s)	113, 127, 184
PpsI	GAGTC	3 cut(s)	113, 127, 184
PsiI	TTATAA	1 cut(s)	420
Psp124BI	GAGCTC	1 cut(s)	300
Psp6I	CCWGG	1 cut(s)	651
PspGI	CCWGG	1 cut(s)	651
PspN4I	GGNNCC	1 cut(s)	153
PspPI	GGNCC	2 cut(s)	283, 491
RsaI	GTAC	7 cut(s)	101, 135, 140, 219, 578, 813, 862
RsaNI	GTAC	7 cut(s)	100, 134, 139, 218, 577, 812, 861
RseI	CAYNNNNRTG	1 cut(s)	267
SacI	GAGCTC	1 cut(s)	300
SalI	GTCGAC	1 cut(s)	963
SapI	GCTCTTC	1 cut(s)	305
SaqAI	TTAA	3 cut(s)	330, 792, 1035
SatI	GCNGC	3 cut(s)	63, 273, 414
Sau3AI	GATC	3 cut(s)	177, 502, 928
Sau96I	GGNCC	2 cut(s)	283, 491
SchI	GAGTC	3 cut(s)	114, 128, 184
ScrFI	CCNGG	1 cut(s)	653
SduI	GDGCHC	3 cut(s)	300, 319, 1016
SfaNI	GCATC	2 cut(s)	400, 518
SmiMI	CAYNNNNRTG	1 cut(s)	267
SmlI	CTYRAG	4 cut(s)	428, 526, 770, 968
SmoI	CTYRAG	4 cut(s)	428, 526, 770, 968
Sse9I	AATT	6 cut(s)	4, 308, 331, 785, 806, 917
SseBI	AGGCCT	1 cut(s)	239
SsiI	CCGC	4 cut(s)	42, 83, 92, 589
SspI	AATATT	1 cut(s)	465
SspMI	CTAG	2 cut(s)	156, 945
SstI	GAGCTC	1 cut(s)	300
StuI	AGGCCT	1 cut(s)	239
StyD4I	CCNGG	1 cut(s)	651
StyI	CCWWGG	3 cut(s)	234, 262, 820
TaaI	ACNGT	6 cut(s)	138, 366, 499, 548, 644, 865
TaiI	ACGT	3 cut(s)	171, 225, 517
TaqI	TCGA	5 cut(s)	56, 294, 306, 621, 964
TaqII	GACCGA	1 cut(s)	1035
TasI	AATT	6 cut(s)	4, 308, 331, 785, 806, 917
TatI	WGTACW	3 cut(s)	138, 811, 860
TfiI	GAWTC	4 cut(s)	88, 686, 869, 908
Tru1I	TTAA	3 cut(s)	330, 792, 1035
Tru9I	TTAA	3 cut(s)	330, 792, 1035
TscAI	CASTG	1 cut(s)	1021
TseFI	GTSAC	1 cut(s)	46
TseI	GCWGC	3 cut(s)	62, 272, 413
Tsp45I	GTSAC	1 cut(s)	46
TspDTI	ATGAA	5 cut(s)	17, 219, 747, 778, 900
TspGWI	ACGGA	1 cut(s)	375
TspRI	CASTG	1 cut(s)	1021
XapI	RAATTY	3 cut(s)	4, 785, 806
XbaI	TCTAGA	1 cut(s)	944
XmiI	GTMKAC	1 cut(s)	964
XspI	CTAG	2 cut(s)	156, 945

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.