tetratricopeptide repeat protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43040 AT2G43040 |
| fragaria_vesca | FvH4_6g38960 FvH4_6g38960 FvH4_6g38960 FvH4_6g38960 FvH4_6g38960 |
| malus_domestica | MD09G1145800.v1.1 MD17G1132300.v1.1 |
| prunus_persica | Prupe.3G180000_v2.0.a1 Prupe.3G180000_v2.0.a1 Prupe.3G180000_v2.0.a1 |
| pyrus_communis | pycom09g06610 pycom17g12580 pycom17g12590 |
| rosa_chinensis | RchiOBHm_Chr2g0152551 |
| rosa_laevigata | RLG00000020645 |
| rosa_multiflora | Rmu_co8464321.1_g000001 Rmu_sc0014904.1_g000001 Rmu_sc0027677.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00095610 |
| rosa_rugosa | Rorug02G0434500 |
| rosa_samantha | Rh2AG495700 Rh2BG507500 Rh2CG481900 Rh2DG518800 |
| rosa_wichuraiana | Rw2G040780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 477 |
| Acc36I | ACCTGC | 1 cut(s) | 1049 |
| AccBSI | CCGCTC | 1 cut(s) | 1871 |
| AciI | CCGC | 6 cut(s) | 1032, 1064, 1330, 1464, 1735, 1869 |
| AclWI | GGATC | 4 cut(s) | 754, 1937, 1946, 2048 |
| AcsI | RAATTY | 7 cut(s) | 38, 55, 450, 630, 916, 1640, 1791 |
| AcuI | CTGAAG | 5 cut(s) | 837, 1196, 1239, 1751, 2053 |
| AcvI | CACGTG | 1 cut(s) | 1435 |
| AcyI | GRCGYC | 1 cut(s) | 2010 |
| AdeI | CACNNNGTG | 1 cut(s) | 215 |
| AfaI | GTAC | 1 cut(s) | 185 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 692, 1063, 1470 |
| AjiI | CACGTC | 1 cut(s) | 1784 |
| AjnI | CCWGG | 2 cut(s) | 886, 2025 |
| Alw21I | GWGCWC | 3 cut(s) | 211, 525, 1108 |
| Alw26I | GTCTC | 5 cut(s) | 331, 350, 384, 494, 1454 |
| Alw44I | GTGCAC | 1 cut(s) | 207 |
| AlwI | GGATC | 4 cut(s) | 754, 1937, 1946, 2048 |
| AoxI | GGCC | 4 cut(s) | 81, 295, 1481, 1595 |
| ApaLI | GTGCAC | 1 cut(s) | 207 |
| ApeKI | GCWGC | 9 cut(s) | 242, 338, 410, 868, 1322, 1448, 1753, 1808, 2030 |
| ApoI | RAATTY | 7 cut(s) | 38, 55, 450, 630, 916, 1640, 1791 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 304, 744 |
| AspA2I | CCTAGG | 1 cut(s) | 781 |
| AspLEI | GCGC | 1 cut(s) | 478 |
| AspS9I | GGNCC | 5 cut(s) | 295, 680, 1203, 1481, 1595 |
| AsuC2I | CCSGG | 1 cut(s) | 1207 |
| AsuHPI | GGTGA | 2 cut(s) | 43, 890 |
| AsuII | TTCGAA | 1 cut(s) | 1644 |
| AvaII | GGWCC | 2 cut(s) | 680, 1203 |
| AvrII | CCTAGG | 1 cut(s) | 781 |
| BaeGI | GKGCMC | 3 cut(s) | 211, 589, 723 |
| BanII | GRGCYC | 4 cut(s) | 166, 525, 1367, 1892 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 510, 542 |
| BbrPI | CACGTG | 1 cut(s) | 1435 |
| BbsI | GAAGAC | 1 cut(s) | 1133 |
| Bbv12I | GWGCWC | 3 cut(s) | 211, 525, 1108 |
| BbvCI | CCTCAGC | 1 cut(s) | 1068 |
| BbvI | GCAGC | 9 cut(s) | 229, 325, 397, 880, 1309, 1435, 1740, 1820, 2042 |
| BccI | CCATC | 8 cut(s) | 218, 465, 479, 811, 1108, 1879, 1988, 2021 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 605, 639, 1212, 1246 |
| BciT130I | CCWGG | 2 cut(s) | 888, 2027 |
| BcnI | CCSGG | 1 cut(s) | 1207 |
| BcoDI | GTCTC | 5 cut(s) | 331, 350, 384, 494, 1454 |
| BfaI | CTAG | 8 cut(s) | 200, 288, 342, 414, 782, 1677, 1805, 1832 |
| BfmI | CTRYAG | 3 cut(s) | 516, 1042, 1743 |
| BfuAI | ACCTGC | 1 cut(s) | 1049 |
| BlnI | CCTAGG | 1 cut(s) | 781 |
| Bme1390I | CCNGG | 3 cut(s) | 888, 1207, 2027 |
| Bme18I | GGWCC | 2 cut(s) | 680, 1203 |
| BmgBI | CACGTC | 1 cut(s) | 1784 |
| BmgT120I | GGNCC | 5 cut(s) | 295, 680, 1203, 1481, 1595 |
| BmiI | GGNNCC | 3 cut(s) | 605, 1205, 1366 |
| BmrFI | CCNGG | 3 cut(s) | 888, 1207, 2027 |
| BmrI | ACTGGG | 1 cut(s) | 681 |
| BmuI | ACTGGG | 1 cut(s) | 681 |
| BpiI | GAAGAC | 1 cut(s) | 1133 |
| BpmI | CTGGAG | 3 cut(s) | 200, 755, 909 |
| Bpu10I | CCTNAGC | 4 cut(s) | 531, 1068, 1107, 1490 |
| Bpu14I | TTCGAA | 1 cut(s) | 1644 |
| BpuMI | CCSGG | 1 cut(s) | 1207 |
| Bsa29I | ATCGAT | 2 cut(s) | 231, 1941 |
| BsaAI | YACGTR | 1 cut(s) | 1435 |
| BsaHI | GRCGYC | 1 cut(s) | 2010 |
| BsaI | GGTCTC | 1 cut(s) | 1454 |
| BsaJI | CCNNGG | 2 cut(s) | 781, 1530 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 692, 1063, 1470 |
| Bse1I | ACTGG | 2 cut(s) | 687, 1722 |
| Bse3DI | GCAATG | 3 cut(s) | 1245, 1484, 1898 |
| BseBI | CCWGG | 2 cut(s) | 888, 2027 |
| BseCI | ATCGAT | 2 cut(s) | 231, 1941 |
| BseDI | CCNNGG | 2 cut(s) | 781, 1530 |
| BseGI | GGATG | 8 cut(s) | 490, 1119, 1123, 1462, 1540, 1702, 1933, 1983 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 692, 1063, 1470 |
| BseMI | GCAATG | 3 cut(s) | 1245, 1484, 1898 |
| BseMII | CTCAG | 8 cut(s) | 264, 396, 522, 1059, 1121, 1504, 1615, 1905 |
| BseNI | ACTGG | 2 cut(s) | 687, 1722 |
| BseSI | GKGCMC | 3 cut(s) | 211, 589, 723 |
| BseXI | GCAGC | 9 cut(s) | 229, 325, 397, 880, 1309, 1435, 1740, 1820, 2042 |
| BsgI | GTGCAG | 1 cut(s) | 1739 |
| BshFI | GGCC | 4 cut(s) | 83, 297, 1483, 1597 |
| BshVI | ATCGAT | 2 cut(s) | 231, 1941 |
| BsiHKAI | GWGCWC | 3 cut(s) | 211, 525, 1108 |
| BsiSI | CCGG | 1 cut(s) | 1207 |
| BslFI | GGGAC | 1 cut(s) | 1189 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 692, 1063, 1470 |
| BsmAI | GTCTC | 5 cut(s) | 331, 350, 384, 494, 1454 |
| BsmFI | GGGAC | 1 cut(s) | 1189 |
| BsmI | GAATGC | 1 cut(s) | 425 |
| BsnI | GGCC | 4 cut(s) | 83, 297, 1483, 1597 |
| Bso31I | GGTCTC | 1 cut(s) | 1454 |
| Bsp119I | TTCGAA | 1 cut(s) | 1644 |
| Bsp1286I | GDGCHC | 8 cut(s) | 166, 211, 525, 589, 723, 1108, 1367, 1892 |
| Bsp143I | GATC | 8 cut(s) | 232, 759, 879, 907, 1351, 1938, 1942, 2053 |
| Bsp19I | CCATGG | 1 cut(s) | 1530 |
| BspACI | CCGC | 6 cut(s) | 1032, 1064, 1330, 1464, 1735, 1869 |
| BspANI | GGCC | 4 cut(s) | 83, 297, 1483, 1597 |
| BspCNI | CTCAG | 8 cut(s) | 265, 397, 523, 1060, 1120, 1503, 1614, 1904 |
| BspDI | ATCGAT | 2 cut(s) | 231, 1941 |
| BspHI | TCATGA | 1 cut(s) | 559 |
| BspLI | GGNNCC | 3 cut(s) | 605, 1205, 1366 |
| BspMAI | CTGCAG | 2 cut(s) | 1046, 1747 |
| BspMI | ACCTGC | 1 cut(s) | 1049 |
| BspPI | GGATC | 4 cut(s) | 754, 1937, 1946, 2048 |
| BspQI | GCTCTTC | 2 cut(s) | 1830, 1878 |
| BspT104I | TTCGAA | 1 cut(s) | 1644 |
| BspTNI | GGTCTC | 1 cut(s) | 1454 |
| BsrBI | CCGCTC | 1 cut(s) | 1871 |
| BsrDI | GCAATG | 3 cut(s) | 1245, 1484, 1898 |
| BsrI | ACTGG | 2 cut(s) | 687, 1722 |
| BssECI | CCNNGG | 2 cut(s) | 781, 1530 |
| BssMI | GATC | 8 cut(s) | 232, 759, 879, 907, 1351, 1938, 1942, 2053 |
| BssNI | GRCGYC | 1 cut(s) | 2010 |
| BssT1I | CCWWGG | 2 cut(s) | 781, 1530 |
| Bst2UI | CCWGG | 2 cut(s) | 888, 2027 |
| Bst4CI | ACNGT | 4 cut(s) | 325, 505, 902, 1344 |
| Bst6I | CTCTTC | 4 cut(s) | 387, 870, 1830, 1878 |
| BstACI | GRCGYC | 1 cut(s) | 2010 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 572 |
| BstBAI | YACGTR | 1 cut(s) | 1435 |
| BstBI | TTCGAA | 1 cut(s) | 1644 |
| BstC8I | GCNNGC | 5 cut(s) | 336, 467, 546, 585, 1392 |
| BstDSI | CCRYGG | 1 cut(s) | 1530 |
| BstEII | GGTNACC | 1 cut(s) | 194 |
| BstF5I | GGATG | 8 cut(s) | 490, 1119, 1123, 1462, 1540, 1702, 1933, 1983 |
| BstHHI | GCGC | 1 cut(s) | 478 |
| BstKTI | GATC | 8 cut(s) | 235, 762, 882, 910, 1354, 1941, 1945, 2056 |
| BstMAI | GTCTC | 5 cut(s) | 331, 350, 384, 494, 1454 |
| BstMBI | GATC | 8 cut(s) | 232, 759, 879, 907, 1351, 1938, 1942, 2053 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 475, 541, 572, 1091, 1808 |
| BstNI | CCWGG | 2 cut(s) | 888, 2027 |
| BstNSI | RCATGY | 2 cut(s) | 338, 469 |
| BstPI | GGTNACC | 1 cut(s) | 194 |
| BstSCI | CCNGG | 3 cut(s) | 886, 1205, 2025 |
| BstSFI | CTRYAG | 3 cut(s) | 516, 1042, 1743 |
| BstSLI | GKGCMC | 3 cut(s) | 211, 589, 723 |
| BstV1I | GCAGC | 9 cut(s) | 229, 325, 397, 880, 1309, 1435, 1740, 1820, 2042 |
| BstV2I | GAAGAC | 1 cut(s) | 1133 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1252 |
| Bsu15I | ATCGAT | 2 cut(s) | 231, 1941 |
| BsuRI | GGCC | 4 cut(s) | 83, 297, 1483, 1597 |
| BsuTUI | ATCGAT | 2 cut(s) | 231, 1941 |
| BtgI | CCRYGG | 1 cut(s) | 1530 |
| BtgZI | GCGATG | 1 cut(s) | 789 |
| BtrI | CACGTC | 1 cut(s) | 1784 |
| BtsCI | GGATG | 8 cut(s) | 490, 1119, 1123, 1462, 1540, 1702, 1933, 1983 |
| BtsI | GCAGTG | 2 cut(s) | 1051, 1108 |
| BtsIMutI | CAGTG | 5 cut(s) | 1051, 1108, 1223, 1440, 1729 |
| BveI | ACCTGC | 1 cut(s) | 1049 |
| Cac8I | GCNNGC | 5 cut(s) | 336, 467, 546, 585, 1392 |
| CciI | TCATGA | 1 cut(s) | 559 |
| CfoI | GCGC | 1 cut(s) | 478 |
| Cfr13I | GGNCC | 5 cut(s) | 295, 680, 1203, 1481, 1595 |
| ClaI | ATCGAT | 2 cut(s) | 231, 1941 |
| CseI | GACGC | 1 cut(s) | 2018 |
| Csp6I | GTAC | 1 cut(s) | 184 |
| CviQI | GTAC | 1 cut(s) | 184 |
| DpnI | GATC | 8 cut(s) | 234, 761, 881, 909, 1353, 1940, 1944, 2055 |
| DpnII | GATC | 8 cut(s) | 232, 759, 879, 907, 1351, 1938, 1942, 2053 |
| DraI | TTTAAA | 1 cut(s) | 1128 |
| DraIII | CACNNNGTG | 1 cut(s) | 215 |
| Eam1104I | CTCTTC | 4 cut(s) | 387, 870, 1830, 1878 |
| EarI | CTCTTC | 4 cut(s) | 387, 870, 1830, 1878 |
| Ecl136II | GAGCTC | 1 cut(s) | 523 |
| Eco130I | CCWWGG | 2 cut(s) | 781, 1530 |
| Eco24I | GRGCYC | 4 cut(s) | 166, 525, 1367, 1892 |
| Eco31I | GGTCTC | 1 cut(s) | 1454 |
| Eco47I | GGWCC | 2 cut(s) | 680, 1203 |
| Eco53kI | GAGCTC | 1 cut(s) | 523 |
| Eco57I | CTGAAG | 5 cut(s) | 837, 1196, 1239, 1751, 2053 |
| Eco72I | CACGTG | 1 cut(s) | 1435 |
| Eco91I | GGTNACC | 1 cut(s) | 194 |
| EcoICRI | GAGCTC | 1 cut(s) | 523 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1203 |
| EcoO65I | GGTNACC | 1 cut(s) | 194 |
| EcoRI | GAATTC | 5 cut(s) | 38, 55, 630, 916, 1640 |
| EcoRII | CCWGG | 2 cut(s) | 886, 2025 |
| EcoT14I | CCWWGG | 2 cut(s) | 781, 1530 |
| EcoT22I | ATGCAT | 2 cut(s) | 471, 1933 |
| EcoT38I | GRGCYC | 4 cut(s) | 166, 525, 1367, 1892 |
| ErhI | CCWWGG | 2 cut(s) | 781, 1530 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 195, 227, 967, 999, 1573, 1605 |
| FaqI | GGGAC | 1 cut(s) | 1189 |
| FauNDI | CATATG | 1 cut(s) | 715 |
| FokI | GGATG | 8 cut(s) | 497, 1126, 1130, 1469, 1547, 1709, 1940, 1990 |
| FriOI | GRGCYC | 4 cut(s) | 166, 525, 1367, 1892 |
| FspBI | CTAG | 8 cut(s) | 200, 288, 342, 414, 782, 1677, 1805, 1832 |
| FspI | TGCGCA | 1 cut(s) | 477 |
| GlaI | GCGC | 1 cut(s) | 477 |
| GsuI | CTGGAG | 3 cut(s) | 200, 755, 909 |
| HaeIII | GGCC | 4 cut(s) | 83, 297, 1483, 1597 |
| HapII | CCGG | 1 cut(s) | 1207 |
| HgaI | GACGC | 1 cut(s) | 2018 |
| HhaI | GCGC | 1 cut(s) | 478 |
| Hin1I | GRCGYC | 1 cut(s) | 2010 |
| Hin6I | GCGC | 1 cut(s) | 476 |
| HinP1I | GCGC | 1 cut(s) | 476 |
| HindIII | AAGCTT | 4 cut(s) | 86, 389, 1915, 2065 |
| HinfI | GANTC | 8 cut(s) | 5, 116, 311, 967, 1052, 1312, 1981, 2048 |
| HpaII | CCGG | 1 cut(s) | 1207 |
| HphI | GGTGA | 2 cut(s) | 43, 890 |
| Hpy166II | GTNNAC | 4 cut(s) | 209, 683, 1727, 1787 |
| Hpy188III | TCNNGA | 6 cut(s) | 107, 353, 530, 560, 734, 1796 |
| Hpy8I | GTNNAC | 4 cut(s) | 209, 683, 1727, 1787 |
| HpyCH4III | ACNGT | 4 cut(s) | 325, 505, 902, 1344 |
| HpyCH4IV | ACGT | 2 cut(s) | 1434, 1783 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 475, 541, 572, 1091, 1808 |
| HpySE526I | ACGT | 2 cut(s) | 1434, 1783 |
| Hsp92I | GRCGYC | 1 cut(s) | 2010 |
| HspAI | GCGC | 1 cut(s) | 476 |
| Kzo9I | GATC | 8 cut(s) | 232, 759, 879, 907, 1351, 1938, 1942, 2053 |
| LguI | GCTCTTC | 2 cut(s) | 1830, 1878 |
| LmnI | GCTCC | 5 cut(s) | 528, 941, 1255, 1370, 2078 |
| Lsp1109I | GCAGC | 9 cut(s) | 229, 325, 397, 880, 1309, 1435, 1740, 1820, 2042 |
| MaeI | CTAG | 8 cut(s) | 200, 288, 342, 414, 782, 1677, 1805, 1832 |
| MaeII | ACGT | 2 cut(s) | 1434, 1783 |
| MaeIII | GTNAC | 5 cut(s) | 194, 551, 797, 1438, 1553 |
| MalI | GATC | 8 cut(s) | 234, 761, 881, 909, 1353, 1940, 1944, 2055 |
| MbiI | CCGCTC | 1 cut(s) | 1871 |
| MboI | GATC | 8 cut(s) | 232, 759, 879, 907, 1351, 1938, 1942, 2053 |
| MfeI | CAATTG | 1 cut(s) | 1539 |
| MhlI | GDGCHC | 8 cut(s) | 166, 211, 525, 589, 723, 1108, 1367, 1892 |
| MlyI | GAGTC | 1 cut(s) | 305 |
| MmeI | TCCRAC | 2 cut(s) | 893, 1361 |
| Mph1103I | ATGCAT | 2 cut(s) | 471, 1933 |
| MroXI | GAANNNNTTC | 2 cut(s) | 304, 744 |
| MseI | TTAA | 6 cut(s) | 368, 401, 974, 1127, 1497, 1934 |
| MslI | CAYNNNNRTG | 2 cut(s) | 993, 1989 |
| MspA1I | CMGCKG | 1 cut(s) | 871 |
| MspI | CCGG | 1 cut(s) | 1207 |
| MspR9I | CCNGG | 3 cut(s) | 888, 1207, 2027 |
| MunI | CAATTG | 1 cut(s) | 1539 |
| Mva1269I | GAATGC | 1 cut(s) | 425 |
| MvaI | CCWGG | 2 cut(s) | 888, 2027 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 475, 541, 572, 1091, 1808 |
| NciI | CCSGG | 1 cut(s) | 1207 |
| NcoI | CCATGG | 1 cut(s) | 1530 |
| NdeI | CATATG | 1 cut(s) | 715 |
| NdeII | GATC | 8 cut(s) | 232, 759, 879, 907, 1351, 1938, 1942, 2053 |
| NlaIV | GGNNCC | 3 cut(s) | 605, 1205, 1366 |
| NmuCI | GTSAC | 2 cut(s) | 797, 1438 |
| NsbI | TGCGCA | 1 cut(s) | 477 |
| NsiI | ATGCAT | 2 cut(s) | 471, 1933 |
| NspI | RCATGY | 2 cut(s) | 338, 469 |
| NspV | TTCGAA | 1 cut(s) | 1644 |
| PaeI | GCATGC | 2 cut(s) | 338, 469 |
| PagI | TCATGA | 1 cut(s) | 559 |
| PciSI | GCTCTTC | 2 cut(s) | 1830, 1878 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 228, 1641 |
| PctI | GAATGC | 1 cut(s) | 425 |
| PdmI | GAANNNNTTC | 2 cut(s) | 304, 744 |
| PfeI | GAWTC | 7 cut(s) | 5, 116, 967, 1052, 1312, 1981, 2048 |
| PleI | GAGTC | 1 cut(s) | 305 |
| PmaCI | CACGTG | 1 cut(s) | 1435 |
| PmlI | CACGTG | 1 cut(s) | 1435 |
| PpsI | GAGTC | 1 cut(s) | 305 |
| Ppu21I | YACGTR | 1 cut(s) | 1435 |
| PpuMI | RGGWCCY | 1 cut(s) | 1203 |
| Psp124BI | GAGCTC | 1 cut(s) | 525 |
| Psp5II | RGGWCCY | 1 cut(s) | 1203 |
| Psp6I | CCWGG | 2 cut(s) | 886, 2025 |
| PspCI | CACGTG | 1 cut(s) | 1435 |
| PspEI | GGTNACC | 1 cut(s) | 194 |
| PspGI | CCWGG | 2 cut(s) | 886, 2025 |
| PspN4I | GGNNCC | 3 cut(s) | 605, 1205, 1366 |
| PspPI | GGNCC | 5 cut(s) | 295, 680, 1203, 1481, 1595 |
| PspPPI | RGGWCCY | 1 cut(s) | 1203 |
| PstI | CTGCAG | 2 cut(s) | 1046, 1747 |
| PvuII | CAGCTG | 1 cut(s) | 871 |
| RsaI | GTAC | 1 cut(s) | 185 |
| RsaNI | GTAC | 1 cut(s) | 184 |
| RseI | CAYNNNNRTG | 2 cut(s) | 993, 1989 |
| SacI | GAGCTC | 1 cut(s) | 525 |
| SapI | GCTCTTC | 2 cut(s) | 1830, 1878 |
| SaqAI | TTAA | 6 cut(s) | 368, 401, 974, 1127, 1497, 1934 |
| Sau3AI | GATC | 8 cut(s) | 232, 759, 879, 907, 1351, 1938, 1942, 2053 |
| Sau96I | GGNCC | 5 cut(s) | 295, 680, 1203, 1481, 1595 |
| SchI | GAGTC | 1 cut(s) | 305 |
| ScrFI | CCNGG | 3 cut(s) | 888, 1207, 2027 |
| SduI | GDGCHC | 8 cut(s) | 166, 211, 525, 589, 723, 1108, 1367, 1892 |
| SfcI | CTRYAG | 3 cut(s) | 516, 1042, 1743 |
| SfuI | TTCGAA | 1 cut(s) | 1644 |
| SinI | GGWCC | 2 cut(s) | 680, 1203 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 993, 1989 |
| SphI | GCATGC | 2 cut(s) | 338, 469 |
| SsiI | CCGC | 6 cut(s) | 1032, 1064, 1330, 1464, 1735, 1869 |
| SspI | AATATT | 1 cut(s) | 103 |
| SspMI | CTAG | 8 cut(s) | 200, 288, 342, 414, 782, 1677, 1805, 1832 |
| SstI | GAGCTC | 1 cut(s) | 525 |
| StyD4I | CCNGG | 3 cut(s) | 886, 1205, 2025 |
| StyI | CCWWGG | 2 cut(s) | 781, 1530 |
| TaaI | ACNGT | 4 cut(s) | 325, 505, 902, 1344 |
| TaiI | ACGT | 2 cut(s) | 1437, 1786 |
| TaqI | TCGA | 9 cut(s) | 222, 231, 1354, 1635, 1644, 1941, 1954, 1999, 2016 |
| TauI | GCSGC | 4 cut(s) | 1034, 1067, 1738, 1871 |
| TfiI | GAWTC | 7 cut(s) | 5, 116, 967, 1052, 1312, 1981, 2048 |
| Tru1I | TTAA | 6 cut(s) | 368, 401, 974, 1127, 1497, 1934 |
| Tru9I | TTAA | 6 cut(s) | 368, 401, 974, 1127, 1497, 1934 |
| TscAI | CASTG | 5 cut(s) | 1051, 1108, 1230, 1447, 1729 |
| TseFI | GTSAC | 2 cut(s) | 797, 1438 |
| TseI | GCWGC | 9 cut(s) | 242, 338, 410, 868, 1322, 1448, 1753, 1808, 2030 |
| Tsp45I | GTSAC | 2 cut(s) | 797, 1438 |
| TspGWI | ACGGA | 1 cut(s) | 1839 |
| TspRI | CASTG | 5 cut(s) | 1051, 1108, 1230, 1447, 1729 |
| VneI | GTGCAC | 1 cut(s) | 207 |
| VpaK11BI | GGWCC | 2 cut(s) | 680, 1203 |
| XapI | RAATTY | 7 cut(s) | 38, 55, 450, 630, 916, 1640, 1791 |
| XceI | RCATGY | 2 cut(s) | 338, 469 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 730 |
| XmaJI | CCTAGG | 1 cut(s) | 781 |
| XmnI | GAANNNNTTC | 2 cut(s) | 304, 744 |
| XspI | CTAG | 8 cut(s) | 200, 288, 342, 414, 782, 1677, 1805, 1832 |
| Zsp2I | ATGCAT | 2 cut(s) | 471, 1933 |