tetratricopeptide repeat protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43040 AT2G43040 |
| fragaria_vesca | FvH4_6g38960 FvH4_6g38960 FvH4_6g38960 FvH4_6g38960 FvH4_6g38960 |
| malus_domestica | MD09G1145800.v1.1 MD17G1132300.v1.1 |
| prunus_persica | Prupe.3G180000_v2.0.a1 Prupe.3G180000_v2.0.a1 Prupe.3G180000_v2.0.a1 |
| pyrus_communis | pycom09g06610 pycom17g12580 pycom17g12590 |
| rosa_chinensis | RchiOBHm_Chr2g0152551 |
| rosa_laevigata | RLG00000020645 |
| rosa_multiflora | Rmu_co8464321.1_g000001 Rmu_sc0014904.1_g000001 Rmu_sc0027677.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00095610 |
| rosa_rugosa | Rorug02G0434500 |
| rosa_samantha | Rh2AG495700 Rh2BG507500 Rh2CG481900 Rh2DG518800 |
| rosa_wichuraiana | Rw2G040780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 903 |
| AciI | CCGC | 3 cut(s) | 960, 1384, 1448 |
| AclWI | GGATC | 6 cut(s) | 754, 794, 807, 1359, 1372, 2048 |
| AcsI | RAATTY | 8 cut(s) | 38, 55, 630, 772, 916, 1038, 1179, 1640 |
| AcuI | CTGAAG | 4 cut(s) | 1196, 1239, 1751, 2053 |
| AdeI | CACNNNGTG | 1 cut(s) | 1238 |
| AfaI | GTAC | 2 cut(s) | 185, 1346 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 692 |
| AflIII | ACRYGT | 1 cut(s) | 901 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 507 |
| AjnI | CCWGG | 2 cut(s) | 886, 1849 |
| Alw21I | GWGCWC | 3 cut(s) | 211, 525, 1308 |
| Alw26I | GTCTC | 6 cut(s) | 331, 384, 494, 1209, 1454, 1519 |
| AlwI | GGATC | 6 cut(s) | 754, 794, 807, 1359, 1372, 2048 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 410 |
| Ama87I | CYCGRG | 1 cut(s) | 1722 |
| AoxI | GGCC | 3 cut(s) | 295, 1242, 1481 |
| ApeKI | GCWGC | 9 cut(s) | 242, 331, 338, 410, 1031, 1064, 1742, 2012, 2030 |
| ApoI | RAATTY | 8 cut(s) | 38, 55, 630, 772, 916, 1038, 1179, 1640 |
| AspLEI | GCGC | 1 cut(s) | 1332 |
| AspS9I | GGNCC | 4 cut(s) | 680, 1481, 1595, 1889 |
| AvaI | CYCGRG | 1 cut(s) | 1722 |
| AvaII | GGWCC | 3 cut(s) | 680, 1595, 1889 |
| BaeGI | GKGCMC | 1 cut(s) | 589 |
| BamHI | GGATCC | 2 cut(s) | 799, 1364 |
| BanII | GRGCYC | 2 cut(s) | 166, 525 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 510, 542 |
| BauI | CACGAG | 1 cut(s) | 107 |
| BbsI | GAAGAC | 2 cut(s) | 1133, 1202 |
| Bbv12I | GWGCWC | 3 cut(s) | 211, 525, 1308 |
| BbvCI | CCTCAGC | 1 cut(s) | 1068 |
| BbvI | GCAGC | 9 cut(s) | 254, 325, 343, 397, 1018, 1076, 1729, 2024, 2042 |
| BccI | CCATC | 7 cut(s) | 218, 465, 811, 1525, 1879, 1988, 1996 |
| BceAI | ACGGC | 2 cut(s) | 425, 1229 |
| BciT130I | CCWGG | 2 cut(s) | 888, 1851 |
| BcoDI | GTCTC | 6 cut(s) | 331, 384, 494, 1209, 1454, 1519 |
| BfaI | CTAG | 6 cut(s) | 303, 671, 923, 1397, 1805, 1832 |
| BfmI | CTRYAG | 3 cut(s) | 246, 516, 1743 |
| Bme1390I | CCNGG | 2 cut(s) | 888, 1851 |
| Bme18I | GGWCC | 3 cut(s) | 680, 1595, 1889 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 507 |
| BmeT110I | CYCGRG | 1 cut(s) | 1722 |
| BmgT120I | GGNCC | 4 cut(s) | 680, 1481, 1595, 1889 |
| BmiI | GGNNCC | 4 cut(s) | 553, 801, 1366, 1890 |
| BmrFI | CCNGG | 2 cut(s) | 888, 1851 |
| BmrI | ACTGGG | 1 cut(s) | 681 |
| BmsI | GCATC | 9 cut(s) | 237, 346, 427, 463, 1435, 1525, 1810, 1918, 1999 |
| BmuI | ACTGGG | 1 cut(s) | 681 |
| BpiI | GAAGAC | 2 cut(s) | 1133, 1202 |
| BpmI | CTGGAG | 1 cut(s) | 909 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1068, 1490 |
| Bsa29I | ATCGAT | 1 cut(s) | 231 |
| BsaI | GGTCTC | 1 cut(s) | 1209 |
| BsaJI | CCNNGG | 3 cut(s) | 441, 781, 1620 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 692 |
| Bse118I | RCCGGY | 1 cut(s) | 297 |
| Bse1I | ACTGG | 1 cut(s) | 687 |
| Bse3DI | GCAATG | 1 cut(s) | 1898 |
| BseBI | CCWGG | 2 cut(s) | 888, 1851 |
| BseCI | ATCGAT | 1 cut(s) | 231 |
| BseDI | CCNNGG | 3 cut(s) | 441, 781, 1620 |
| BseGI | GGATG | 7 cut(s) | 97, 1123, 1462, 1540, 1630, 1787, 2007 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 692 |
| BseMI | GCAATG | 1 cut(s) | 1898 |
| BseMII | CTCAG | 7 cut(s) | 264, 1059, 1121, 1504, 1615, 1628, 1938 |
| BseNI | ACTGG | 1 cut(s) | 687 |
| BseSI | GKGCMC | 1 cut(s) | 589 |
| BseXI | GCAGC | 9 cut(s) | 254, 325, 343, 397, 1018, 1076, 1729, 2024, 2042 |
| BsgI | GTGCAG | 1 cut(s) | 1739 |
| Bsh1236I | CGCG | 1 cut(s) | 903 |
| BshFI | GGCC | 3 cut(s) | 297, 1244, 1483 |
| BshVI | ATCGAT | 1 cut(s) | 231 |
| BsiHKAI | GWGCWC | 3 cut(s) | 211, 525, 1308 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1722 |
| BsiSI | CCGG | 1 cut(s) | 298 |
| BslFI | GGGAC | 1 cut(s) | 1902 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 692 |
| BsmAI | GTCTC | 6 cut(s) | 331, 384, 494, 1209, 1454, 1519 |
| BsmFI | GGGAC | 1 cut(s) | 1902 |
| BsmI | GAATGC | 1 cut(s) | 319 |
| BsnI | GGCC | 3 cut(s) | 297, 1244, 1483 |
| Bso31I | GGTCTC | 1 cut(s) | 1209 |
| BsoBI | CYCGRG | 1 cut(s) | 1722 |
| Bsp1286I | GDGCHC | 5 cut(s) | 166, 211, 525, 589, 1308 |
| Bsp143I | GATC | 7 cut(s) | 232, 759, 799, 879, 907, 1364, 2053 |
| BspACI | CCGC | 3 cut(s) | 960, 1384, 1448 |
| BspANI | GGCC | 3 cut(s) | 297, 1244, 1483 |
| BspCNI | CTCAG | 7 cut(s) | 265, 1060, 1120, 1503, 1614, 1627, 1937 |
| BspDI | ATCGAT | 1 cut(s) | 231 |
| BspFNI | CGCG | 1 cut(s) | 903 |
| BspHI | TCATGA | 2 cut(s) | 415, 1795 |
| BspLI | GGNNCC | 4 cut(s) | 553, 801, 1366, 1890 |
| BspMAI | CTGCAG | 1 cut(s) | 1747 |
| BspPI | GGATC | 6 cut(s) | 754, 794, 807, 1359, 1372, 2048 |
| BspQI | GCTCTTC | 1 cut(s) | 216 |
| BspTNI | GGTCTC | 1 cut(s) | 1209 |
| BsrDI | GCAATG | 1 cut(s) | 1898 |
| BsrFI | RCCGGY | 1 cut(s) | 297 |
| BsrI | ACTGG | 1 cut(s) | 687 |
| BssAI | RCCGGY | 1 cut(s) | 297 |
| BssECI | CCNNGG | 3 cut(s) | 441, 781, 1620 |
| BssMI | GATC | 7 cut(s) | 232, 759, 799, 879, 907, 1364, 2053 |
| BssSI | CACGAG | 1 cut(s) | 107 |
| BssT1I | CCWWGG | 1 cut(s) | 781 |
| Bst2BI | CACGAG | 1 cut(s) | 107 |
| Bst2UI | CCWGG | 2 cut(s) | 888, 1851 |
| Bst4CI | ACNGT | 3 cut(s) | 505, 1023, 1553 |
| Bst6I | CTCTTC | 4 cut(s) | 216, 387, 732, 870 |
| BstC8I | GCNNGC | 6 cut(s) | 240, 336, 585, 1173, 1392, 1678 |
| BstDSI | CCRYGG | 1 cut(s) | 441 |
| BstF5I | GGATG | 7 cut(s) | 97, 1123, 1462, 1540, 1630, 1787, 2007 |
| BstFNI | CGCG | 1 cut(s) | 903 |
| BstHHI | GCGC | 1 cut(s) | 1332 |
| BstKTI | GATC | 7 cut(s) | 235, 762, 802, 882, 910, 1367, 2056 |
| BstMAI | GTCTC | 6 cut(s) | 331, 384, 494, 1209, 1454, 1519 |
| BstMBI | GATC | 7 cut(s) | 232, 759, 799, 879, 907, 1364, 2053 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1091, 2012 |
| BstNI | CCWGG | 2 cut(s) | 888, 1851 |
| BstNSI | RCATGY | 1 cut(s) | 338 |
| BstSCI | CCNGG | 2 cut(s) | 886, 1849 |
| BstSFI | CTRYAG | 3 cut(s) | 246, 516, 1743 |
| BstSLI | GKGCMC | 1 cut(s) | 589 |
| BstUI | CGCG | 1 cut(s) | 903 |
| BstV1I | GCAGC | 9 cut(s) | 254, 325, 343, 397, 1018, 1076, 1729, 2024, 2042 |
| BstV2I | GAAGAC | 2 cut(s) | 1133, 1202 |
| BstX2I | RGATCY | 2 cut(s) | 799, 1364 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 537 |
| BstYI | RGATCY | 2 cut(s) | 799, 1364 |
| Bsu15I | ATCGAT | 1 cut(s) | 231 |
| BsuRI | GGCC | 3 cut(s) | 297, 1244, 1483 |
| BsuTUI | ATCGAT | 1 cut(s) | 231 |
| BtgI | CCRYGG | 1 cut(s) | 441 |
| BtsCI | GGATG | 7 cut(s) | 97, 1123, 1462, 1540, 1630, 1787, 2007 |
| BtsI | GCAGTG | 3 cut(s) | 1051, 1484, 1751 |
| BtsIMutI | CAGTG | 7 cut(s) | 605, 806, 1019, 1051, 1440, 1484, 1751 |
| Cac8I | GCNNGC | 6 cut(s) | 240, 336, 585, 1173, 1392, 1678 |
| CaiI | CAGNNNCTG | 1 cut(s) | 410 |
| CciI | TCATGA | 2 cut(s) | 415, 1795 |
| CfoI | GCGC | 1 cut(s) | 1332 |
| Cfr10I | RCCGGY | 1 cut(s) | 297 |
| Cfr13I | GGNCC | 4 cut(s) | 680, 1481, 1595, 1889 |
| ClaI | ATCGAT | 1 cut(s) | 231 |
| CseI | GACGC | 1 cut(s) | 1706 |
| Csp6I | GTAC | 2 cut(s) | 184, 1345 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1008, 1043, 1798, 1833 |
| CviQI | GTAC | 2 cut(s) | 184, 1345 |
| DpnI | GATC | 7 cut(s) | 234, 761, 801, 881, 909, 1366, 2055 |
| DpnII | GATC | 7 cut(s) | 232, 759, 799, 879, 907, 1364, 2053 |
| DraI | TTTAAA | 2 cut(s) | 966, 1128 |
| DraIII | CACNNNGTG | 1 cut(s) | 1238 |
| DriI | GACNNNNNGTC | 1 cut(s) | 507 |
| Eam1104I | CTCTTC | 4 cut(s) | 216, 387, 732, 870 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 507 |
| EarI | CTCTTC | 4 cut(s) | 216, 387, 732, 870 |
| Ecl136II | GAGCTC | 1 cut(s) | 523 |
| Eco130I | CCWWGG | 1 cut(s) | 781 |
| Eco24I | GRGCYC | 2 cut(s) | 166, 525 |
| Eco31I | GGTCTC | 1 cut(s) | 1209 |
| Eco47I | GGWCC | 3 cut(s) | 680, 1595, 1889 |
| Eco53kI | GAGCTC | 1 cut(s) | 523 |
| Eco57I | CTGAAG | 4 cut(s) | 1196, 1239, 1751, 2053 |
| Eco88I | CYCGRG | 1 cut(s) | 1722 |
| EcoICRI | GAGCTC | 1 cut(s) | 523 |
| EcoRI | GAATTC | 4 cut(s) | 38, 55, 630, 916 |
| EcoRII | CCWGG | 2 cut(s) | 886, 1849 |
| EcoT14I | CCWWGG | 1 cut(s) | 781 |
| EcoT22I | ATGCAT | 1 cut(s) | 1933 |
| EcoT38I | GRGCYC | 2 cut(s) | 166, 525 |
| ErhI | CCWWGG | 1 cut(s) | 781 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 195, 227, 1573, 1605 |
| FaqI | GGGAC | 1 cut(s) | 1902 |
| FauNDI | CATATG | 1 cut(s) | 715 |
| FokI | GGATG | 7 cut(s) | 104, 1130, 1469, 1547, 1637, 1794, 2014 |
| FriOI | GRGCYC | 2 cut(s) | 166, 525 |
| FspBI | CTAG | 6 cut(s) | 303, 671, 923, 1397, 1805, 1832 |
| GlaI | GCGC | 1 cut(s) | 1331 |
| GsuI | CTGGAG | 1 cut(s) | 909 |
| HaeIII | GGCC | 3 cut(s) | 297, 1244, 1483 |
| HapII | CCGG | 1 cut(s) | 298 |
| HgaI | GACGC | 1 cut(s) | 1706 |
| HhaI | GCGC | 1 cut(s) | 1332 |
| Hin6I | GCGC | 1 cut(s) | 1330 |
| HinP1I | GCGC | 1 cut(s) | 1330 |
| HindIII | AAGCTT | 3 cut(s) | 389, 1959, 2065 |
| HinfI | GANTC | 8 cut(s) | 5, 116, 311, 604, 1052, 1312, 1981, 2048 |
| HpaII | CCGG | 1 cut(s) | 298 |
| Hpy166II | GTNNAC | 3 cut(s) | 668, 683, 1919 |
| Hpy188I | TCNGA | 9 cut(s) | 636, 1192, 1219, 1270, 1426, 1604, 1617, 1927, 2053 |
| Hpy8I | GTNNAC | 3 cut(s) | 668, 683, 1919 |
| HpyCH4III | ACNGT | 3 cut(s) | 505, 1023, 1553 |
| HpyCH4IV | ACGT | 1 cut(s) | 1347 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1091, 2012 |
| HpySE526I | ACGT | 1 cut(s) | 1347 |
| HspAI | GCGC | 1 cut(s) | 1330 |
| Kzo9I | GATC | 7 cut(s) | 232, 759, 799, 879, 907, 1364, 2053 |
| LguI | GCTCTTC | 1 cut(s) | 216 |
| LmnI | GCTCC | 3 cut(s) | 528, 941, 1474 |
| Lsp1109I | GCAGC | 9 cut(s) | 254, 325, 343, 397, 1018, 1076, 1729, 2024, 2042 |
| LweI | GCATC | 9 cut(s) | 237, 346, 427, 463, 1435, 1525, 1810, 1918, 1999 |
| MaeI | CTAG | 6 cut(s) | 303, 671, 923, 1397, 1805, 1832 |
| MaeII | ACGT | 1 cut(s) | 1347 |
| MaeIII | GTNAC | 2 cut(s) | 1438, 1553 |
| MalI | GATC | 7 cut(s) | 234, 761, 801, 881, 909, 1366, 2055 |
| MboI | GATC | 7 cut(s) | 232, 759, 799, 879, 907, 1364, 2053 |
| MfeI | CAATTG | 1 cut(s) | 1539 |
| MflI | RGATCY | 2 cut(s) | 799, 1364 |
| MhlI | GDGCHC | 5 cut(s) | 166, 211, 525, 589, 1308 |
| MluI | ACGCGT | 1 cut(s) | 901 |
| MmeI | TCCRAC | 2 cut(s) | 893, 1057 |
| Mph1103I | ATGCAT | 1 cut(s) | 1933 |
| MseI | TTAA | 9 cut(s) | 401, 755, 965, 1127, 1274, 1373, 1497, 1608, 1934 |
| MslI | CAYNNNNRTG | 3 cut(s) | 993, 1874, 1989 |
| MspA1I | CMGCKG | 1 cut(s) | 1067 |
| MspI | CCGG | 1 cut(s) | 298 |
| MspR9I | CCNGG | 2 cut(s) | 888, 1851 |
| MunI | CAATTG | 1 cut(s) | 1539 |
| Mva1269I | GAATGC | 1 cut(s) | 319 |
| MvaI | CCWGG | 2 cut(s) | 888, 1851 |
| MvnI | CGCG | 1 cut(s) | 903 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1091, 2012 |
| NdeI | CATATG | 1 cut(s) | 715 |
| NdeII | GATC | 7 cut(s) | 232, 759, 799, 879, 907, 1364, 2053 |
| NlaIV | GGNNCC | 4 cut(s) | 553, 801, 1366, 1890 |
| NmuCI | GTSAC | 1 cut(s) | 1438 |
| NsiI | ATGCAT | 1 cut(s) | 1933 |
| NspI | RCATGY | 1 cut(s) | 338 |
| PaeI | GCATGC | 1 cut(s) | 338 |
| PagI | TCATGA | 2 cut(s) | 415, 1795 |
| PciSI | GCTCTTC | 1 cut(s) | 216 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 907 |
| PctI | GAATGC | 1 cut(s) | 319 |
| PfeI | GAWTC | 8 cut(s) | 5, 116, 311, 604, 1052, 1312, 1981, 2048 |
| Psp124BI | GAGCTC | 1 cut(s) | 525 |
| Psp6I | CCWGG | 2 cut(s) | 886, 1849 |
| PspGI | CCWGG | 2 cut(s) | 886, 1849 |
| PspN4I | GGNNCC | 4 cut(s) | 553, 801, 1366, 1890 |
| PspPI | GGNCC | 4 cut(s) | 680, 1481, 1595, 1889 |
| PstI | CTGCAG | 1 cut(s) | 1747 |
| PstNI | CAGNNNCTG | 1 cut(s) | 410 |
| PsuI | RGATCY | 2 cut(s) | 799, 1364 |
| PvuII | CAGCTG | 1 cut(s) | 1067 |
| RsaI | GTAC | 2 cut(s) | 185, 1346 |
| RsaNI | GTAC | 2 cut(s) | 184, 1345 |
| RseI | CAYNNNNRTG | 3 cut(s) | 993, 1874, 1989 |
| SacI | GAGCTC | 1 cut(s) | 525 |
| SapI | GCTCTTC | 1 cut(s) | 216 |
| SaqAI | TTAA | 9 cut(s) | 401, 755, 965, 1127, 1274, 1373, 1497, 1608, 1934 |
| Sau3AI | GATC | 7 cut(s) | 232, 759, 799, 879, 907, 1364, 2053 |
| Sau96I | GGNCC | 4 cut(s) | 680, 1481, 1595, 1889 |
| ScrFI | CCNGG | 2 cut(s) | 888, 1851 |
| SduI | GDGCHC | 5 cut(s) | 166, 211, 525, 589, 1308 |
| SfaNI | GCATC | 9 cut(s) | 237, 346, 427, 463, 1435, 1525, 1810, 1918, 1999 |
| SfcI | CTRYAG | 3 cut(s) | 246, 516, 1743 |
| SinI | GGWCC | 3 cut(s) | 680, 1595, 1889 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 993, 1874, 1989 |
| SphI | GCATGC | 1 cut(s) | 338 |
| SsiI | CCGC | 3 cut(s) | 960, 1384, 1448 |
| SspI | AATATT | 2 cut(s) | 103, 453 |
| SspMI | CTAG | 6 cut(s) | 303, 671, 923, 1397, 1805, 1832 |
| SstI | GAGCTC | 1 cut(s) | 525 |
| StyD4I | CCNGG | 2 cut(s) | 886, 1849 |
| StyI | CCWWGG | 1 cut(s) | 781 |
| TaaI | ACNGT | 3 cut(s) | 505, 1023, 1553 |
| TaiI | ACGT | 1 cut(s) | 1350 |
| TaqI | TCGA | 3 cut(s) | 231, 511, 2061 |
| TaqII | GACCGA | 1 cut(s) | 1634 |
| TauI | GCSGC | 2 cut(s) | 962, 1451 |
| TfiI | GAWTC | 8 cut(s) | 5, 116, 311, 604, 1052, 1312, 1981, 2048 |
| Tru1I | TTAA | 9 cut(s) | 401, 755, 965, 1127, 1274, 1373, 1497, 1608, 1934 |
| Tru9I | TTAA | 9 cut(s) | 401, 755, 965, 1127, 1274, 1373, 1497, 1608, 1934 |
| TscAI | CASTG | 7 cut(s) | 605, 813, 1026, 1051, 1447, 1491, 1758 |
| TseFI | GTSAC | 1 cut(s) | 1438 |
| TseI | GCWGC | 9 cut(s) | 242, 331, 338, 410, 1031, 1064, 1742, 2012, 2030 |
| Tsp45I | GTSAC | 1 cut(s) | 1438 |
| TspGWI | ACGGA | 2 cut(s) | 1357, 2014 |
| TspRI | CASTG | 7 cut(s) | 605, 813, 1026, 1051, 1447, 1491, 1758 |
| VpaK11BI | GGWCC | 3 cut(s) | 680, 1595, 1889 |
| XapI | RAATTY | 8 cut(s) | 38, 55, 630, 772, 916, 1038, 1179, 1640 |
| XbaI | TCTAGA | 1 cut(s) | 302 |
| XceI | RCATGY | 1 cut(s) | 338 |
| XspI | CTAG | 6 cut(s) | 303, 671, 923, 1397, 1805, 1832 |
| Zsp2I | ATGCAT | 1 cut(s) | 1933 |