Prupe.3G206300_v2.0.a1

Protein of unknown function (DUF1664)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0010965
Physical Location & Seq
Reverse (-)
21343123 .. 21347250
4128 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G206300.1

Sequence Viewer

Length: 1164 bp
ATGAATGATTTTGGCCATGGCACAAGGAGAAAATGGAAAAAGCACACAGCTTTAACTAACTTAGACAAAACTCTTGGTGGAAATGTCGAGAAAACCCCCAAACTTCTATATATTTTCCTTGGTCGGTCAGTAAGTTTTAAGCTGTCGTTGAGTCAAAAATTGGATCTTTCTGGGGAAGGAAGAAGGCCAAGAAAAATGGCATTACAGGCTGCCGGGGTATCAACCTCCAAGGTGCTCGTCCTCGTTGGAGCAGGCTTGACCGGTTCTATCGTTTTGAGGAGCGGGCGATTATCTGATCTTATTGCACAGCTTCATGAGTTATTGAAGGGTGTAAACGAAGCTGAGATTTTGTCAGAGAAATATGATGGTGCAATTATCAGAGCTCAGATTCAACAATTGGCTCAAGAAATCAGGGAGTTAACCTTATCTGGCCCTGTAACCATCTTCAAGGAGAACTCTGCCTCCAGTGGGAATTATGCTTCATATTTAGTTCCAGCTGCTGCACTTGGTGCAATGGGCTATTGTTACATGTGGTGGAAGGGCTGGTCATTATCTGATGTAATGTATGTAACAAAGCACAGTATGGCAAATGCTGTTGCAACTGTGTCCAAACAATTAGAGCATGTCCATGAAACATTGGCTTCTACAAAAAGGCATCTGACAAAGAAGCTGGAAAACTTGGATTGGAAGATGGAGGAGCAGAAGGAAATAAGTGAGCTTATTGCAAATGATGTGAATGAGGTGAAATCAAACCTTTCTCAAATTGGGTTTGATGTTGAATTAATTCATCAAATGGTCGCTGGGTTGGAAGGGAAGGTCGAGCTTATTGAGAGCAAACAGGATGCCACCAACTCAGGTCTATGGTATCTATGCCAAGTAGCAGAAGGCTTCAAAGATGGGTTGGATGCTAAACCATTTCAGAATGTCTCTGCTAAGCTAGGAAAGCATTCAACAATGGCTTTAGAGGATAAATCACTCAAGGGCCTACAATTCCTTGCTGACACTAAAGAGCCAAGCGTGACTGAGAAATCAATGACAAGCGCGAAAAAGAATGATCCCGACAACTTCCCTGGGGAAAAGGTTCCAAGAATGAAAACAAGAATACACAGGTCATATCCAGTTGGGATTGCTTTGACCCGGGACATAACAGGCTCGGATTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1664

Protein Analysis

388

Amino Acids

42.69

Weight (kDa)

9.09

Isoelectric Point (pI)

31.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010965)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04960 AT1G04960
fragaria_vesca FvH4_6g41750 FvH4_6g41750
malus_domestica MD09G1117500.v1.1 MD17G1108700.v1.1
prunus_persica Prupe.3G206300_v2.0.a1 Prupe.3G206300_v2.0.a1
pyrus_communis pycom17g10140
rosa_chinensis RchiOBHm_Chr2g0157541
rosa_laevigata RLG00000020996
rosa_multiflora Rmu_sc0000195.1_g000040
rosa_roxburghii Rroxscaffold_2G00092140
rosa_rugosa Rorug02G0461900
rosa_samantha Rh2AG526000 Rh2BG540700 Rh2CG510700 Rh2DG549200 Rh4BG150000
rosa_wichuraiana Rw2G043570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 282
AccII CGCG 1 cut(s) 1043
AciI CCGC 1 cut(s) 282
AclWI GGATC 2 cut(s) 171, 1049
AcoI YGGCCR 1 cut(s) 13
AdeI CACNNNGTG 1 cut(s) 509
AfiI CCNNNNNNNGG 1 cut(s) 468
AflIII ACRYGT 1 cut(s) 528
AgeI ACCGGT 1 cut(s) 260
AgsI TTSAA 6 cut(s) 325, 392, 448, 779, 892, 951
AjnI CCWGG 1 cut(s) 1069
AloI GAACNNNNNNTCC 2 cut(s) 446, 478
Alw21I GWGCWC 2 cut(s) 237, 385
Alw26I GTCTC 1 cut(s) 931
AlwI GGATC 2 cut(s) 171, 1049
AlwNI CAGNNNCTG 1 cut(s) 500
Ama87I CYCGRG 1 cut(s) 1137
AoxI GGCC 4 cut(s) 13, 185, 430, 982
ApeKI GCWGC 3 cut(s) 209, 497, 500
AseI ATTAAT 1 cut(s) 782
AsiGI ACCGGT 1 cut(s) 260
Asp700I GAANNNNTTC 3 cut(s) 783, 946, 1080
AspLEI GCGC 1 cut(s) 1043
AspS9I GGNCC 2 cut(s) 431, 982
AsuC2I CCSGG 3 cut(s) 214, 1138, 1139
AsuHPI GGTGA 1 cut(s) 754
AvaI CYCGRG 1 cut(s) 1137
BalI TGGCCA 1 cut(s) 15
BanII GRGCYC 1 cut(s) 385
Bbv12I GWGCWC 2 cut(s) 237, 385
BbvI GCAGC 3 cut(s) 196, 484, 487
BccI CCATC 4 cut(s) 359, 449, 685, 890
BciT130I CCWGG 1 cut(s) 1071
BcnI CCSGG 3 cut(s) 214, 1138, 1139
BcoDI GTCTC 1 cut(s) 931
BfaI CTAG 1 cut(s) 938
BisI GCNGC 3 cut(s) 210, 498, 501
BlpI GCTNAGC 1 cut(s) 933
BlsI GCNGC 3 cut(s) 211, 499, 502
Bme1390I CCNGG 4 cut(s) 214, 1071, 1138, 1139
BmeT110I CYCGRG 1 cut(s) 1137
BmgT120I GGNCC 2 cut(s) 431, 982
BmiI GGNNCC 1 cut(s) 1083
BmrFI CCNGG 4 cut(s) 214, 1071, 1138, 1139
BmsI GCATC 3 cut(s) 664, 832, 895
BpmI CTGGAG 1 cut(s) 448
Bpu1102I GCTNAGC 1 cut(s) 933
BpuEI CTTGAG 2 cut(s) 387, 962
BpuMI CCSGG 3 cut(s) 214, 1138, 1139
BsaJI CCNNGG 7 cut(s) 16, 118, 213, 228, 1069, 1070, 1137
BsaWI WCCGGW 1 cut(s) 260
BsaXI ACNNNNNCTCC 2 cut(s) 446, 476
Bsc4I CCNNNNNNNGG 1 cut(s) 468
Bse118I RCCGGY 1 cut(s) 260
Bse1I ACTGG 2 cut(s) 465, 1118
Bse3DI GCAATG 1 cut(s) 519
BseBI CCWGG 1 cut(s) 1071
BseDI CCNNGG 7 cut(s) 16, 118, 213, 228, 1069, 1070, 1137
BseGI GGATG 2 cut(s) 847, 910
BseLI CCNNNNNNNGG 1 cut(s) 468
BseMI GCAATG 1 cut(s) 519
BseMII CTCAG 4 cut(s) 333, 398, 867, 1014
BseNI ACTGG 2 cut(s) 465, 1118
BseRI GAGGAG 2 cut(s) 292, 710
BseXI GCAGC 3 cut(s) 196, 484, 487
BseYI CCCAGC 1 cut(s) 800
BsgI GTGCAG 1 cut(s) 486
Bsh1236I CGCG 1 cut(s) 1043
BshFI GGCC 4 cut(s) 15, 187, 432, 984
BshTI ACCGGT 1 cut(s) 260
BsiHKAI GWGCWC 2 cut(s) 237, 385
BsiHKCI CYCGRG 1 cut(s) 1137
BsiSI CCGG 3 cut(s) 213, 261, 1138
BslFI GGGAC 1 cut(s) 1154
BslI CCNNNNNNNGG 1 cut(s) 468
BsmAI GTCTC 1 cut(s) 931
BsmFI GGGAC 1 cut(s) 1154
BsmI GAATGC 1 cut(s) 946
BsnI GGCC 4 cut(s) 15, 187, 432, 984
BsoBI CYCGRG 1 cut(s) 1137
Bsp1286I GDGCHC 2 cut(s) 237, 385
Bsp143I GATC 3 cut(s) 163, 295, 1054
Bsp1720I GCTNAGC 1 cut(s) 933
Bsp19I CCATGG 1 cut(s) 16
BspACI CCGC 1 cut(s) 282
BspANI GGCC 4 cut(s) 15, 187, 432, 984
BspCNI CTCAG 4 cut(s) 334, 397, 866, 1015
BspFNI CGCG 1 cut(s) 1043
BspHI TCATGA 1 cut(s) 313
BspLI GGNNCC 1 cut(s) 1083
BspPI GGATC 2 cut(s) 171, 1049
BsrBI CCGCTC 1 cut(s) 282
BsrDI GCAATG 1 cut(s) 519
BsrFI RCCGGY 1 cut(s) 260
BsrI ACTGG 2 cut(s) 465, 1118
BssAI RCCGGY 1 cut(s) 260
BssECI CCNNGG 7 cut(s) 16, 118, 213, 228, 1069, 1070, 1137
BssMI GATC 3 cut(s) 163, 295, 1054
BssT1I CCWWGG 3 cut(s) 16, 118, 228
Bst2UI CCWGG 1 cut(s) 1071
Bst4CI ACNGT 2 cut(s) 581, 604
BstAPI GCANNNNNTGC 1 cut(s) 509
BstC8I GCNNGC 2 cut(s) 253, 284
BstDEI CTNAG 6 cut(s) 61, 342, 384, 853, 933, 1023
BstDSI CCRYGG 1 cut(s) 16
BstF5I GGATG 2 cut(s) 847, 910
BstFNI CGCG 1 cut(s) 1043
BstHHI GCGC 1 cut(s) 1043
BstKTI GATC 3 cut(s) 166, 298, 1057
BstMAI GTCTC 1 cut(s) 931
BstMBI GATC 3 cut(s) 163, 295, 1054
BstMWI GCNNNNNNNGC 3 cut(s) 206, 509, 943
BstNI CCWGG 1 cut(s) 1071
BstNSI RCATGY 2 cut(s) 532, 626
BstSCI CCNGG 4 cut(s) 212, 1069, 1136, 1137
BstUI CGCG 1 cut(s) 1043
BstV1I GCAGC 3 cut(s) 196, 484, 487
BstX2I RGATCY 1 cut(s) 163
BstYI RGATCY 1 cut(s) 163
BsuRI GGCC 4 cut(s) 15, 187, 432, 984
BtgI CCRYGG 1 cut(s) 16
BtsCI GGATG 2 cut(s) 847, 910
BtsIMutI CAGTG 1 cut(s) 472
Cac8I GCNNGC 2 cut(s) 253, 284
CaiI CAGNNNCTG 1 cut(s) 500
CciI TCATGA 1 cut(s) 313
CfoI GCGC 1 cut(s) 1043
Cfr10I RCCGGY 1 cut(s) 260
Cfr13I GGNCC 2 cut(s) 431, 982
Cfr9I CCCGGG 1 cut(s) 1137
CspAI ACCGGT 1 cut(s) 260
CviAII CATG 5 cut(s) 17, 314, 529, 623, 629
DdeI CTNAG 6 cut(s) 61, 342, 384, 853, 933, 1023
DpnI GATC 3 cut(s) 165, 297, 1056
DpnII GATC 3 cut(s) 163, 295, 1054
DraIII CACNNNGTG 1 cut(s) 509
EaeI YGGCCR 1 cut(s) 13
Ecl136II GAGCTC 1 cut(s) 383
Eco130I CCWWGG 3 cut(s) 16, 118, 228
Eco24I GRGCYC 1 cut(s) 385
Eco53kI GAGCTC 1 cut(s) 383
Eco88I CYCGRG 1 cut(s) 1137
EcoICRI GAGCTC 1 cut(s) 383
EcoO109I RGGNCCY 1 cut(s) 982
EcoRII CCWGG 1 cut(s) 1069
EcoT14I CCWWGG 3 cut(s) 16, 118, 228
EcoT38I GRGCYC 1 cut(s) 385
ErhI CCWWGG 3 cut(s) 16, 118, 228
FaeI CATG 5 cut(s) 20, 317, 532, 626, 632
FaqI GGGAC 1 cut(s) 1154
FatI CATG 5 cut(s) 16, 313, 528, 622, 628
FauI CCCGC 1 cut(s) 275
Fnu4HI GCNGC 3 cut(s) 210, 498, 501
FokI GGATG 2 cut(s) 854, 917
FriOI GRGCYC 1 cut(s) 385
Fsp4HI GCNGC 3 cut(s) 210, 498, 501
FspBI CTAG 1 cut(s) 938
GlaI GCGC 1 cut(s) 1042
GluI GCNGC 3 cut(s) 210, 498, 501
GsaI CCCAGC 1 cut(s) 804
GsuI CTGGAG 1 cut(s) 448
HaeIII GGCC 4 cut(s) 15, 187, 432, 984
HapII CCGG 3 cut(s) 213, 261, 1138
HhaI GCGC 1 cut(s) 1043
Hin1II CATG 5 cut(s) 20, 317, 532, 626, 632
Hin6I GCGC 1 cut(s) 1041
HinP1I GCGC 1 cut(s) 1041
HincII GTYRAC 1 cut(s) 420
HindII GTYRAC 1 cut(s) 420
HinfI GANTC 2 cut(s) 151, 388
HpaI GTTAAC 1 cut(s) 420
HpaII CCGG 3 cut(s) 213, 261, 1138
HphI GGTGA 1 cut(s) 754
Hpy166II GTNNAC 2 cut(s) 334, 420
Hpy188I TCNGA 8 cut(s) 295, 355, 380, 387, 556, 660, 921, 1156
Hpy188III TCNNGA 4 cut(s) 88, 314, 404, 1058
Hpy8I GTNNAC 2 cut(s) 334, 420
HpyAV CCTTC 8 cut(s) 170, 177, 319, 532, 697, 803, 808, 878
HpyCH4III ACNGT 2 cut(s) 581, 604
HpyCH4V TGCA 6 cut(s) 305, 371, 503, 512, 599, 725
HpyF10VI GCNNNNNNNGC 3 cut(s) 206, 509, 943
HpyF3I CTNAG 6 cut(s) 61, 342, 384, 853, 933, 1023
Hsp92II CATG 5 cut(s) 20, 317, 532, 626, 632
HspAI GCGC 1 cut(s) 1041
KspAI GTTAAC 1 cut(s) 420
Kzo9I GATC 3 cut(s) 163, 295, 1054
LmnI GCTCC 3 cut(s) 248, 279, 697
Lsp1109I GCAGC 3 cut(s) 196, 484, 487
LweI GCATC 3 cut(s) 664, 832, 895
MaeI CTAG 1 cut(s) 938
MaeIII GTNAC 4 cut(s) 436, 524, 568, 1018
MalI GATC 3 cut(s) 165, 297, 1056
MbiI CCGCTC 1 cut(s) 282
MboI GATC 3 cut(s) 163, 295, 1054
MboII GAAGA 3 cut(s) 192, 436, 700
MfeI CAATTG 1 cut(s) 395
MflI RGATCY 1 cut(s) 163
MhlI GDGCHC 2 cut(s) 237, 385
MlsI TGGCCA 1 cut(s) 15
MluCI AATT 9 cut(s) 158, 372, 395, 472, 614, 762, 779, 783, 989
MluNI TGGCCA 1 cut(s) 15
MlyI GAGTC 1 cut(s) 160
MmeI TCCRAC 3 cut(s) 226, 786, 882
MnlI CCTC 7 cut(s) 235, 251, 270, 472, 688, 733, 958
Mox20I TGGCCA 1 cut(s) 15
MroXI GAANNNNTTC 3 cut(s) 783, 946, 1080
MscI TGGCCA 1 cut(s) 15
MseI TTAA 4 cut(s) 53, 138, 419, 782
MslI CAYNNNNRTG 1 cut(s) 627
Msp20I TGGCCA 1 cut(s) 15
MspA1I CMGCKG 1 cut(s) 497
MspI CCGG 3 cut(s) 213, 261, 1138
MspR9I CCNGG 4 cut(s) 214, 1071, 1138, 1139
MunI CAATTG 1 cut(s) 395
Mva1269I GAATGC 1 cut(s) 946
MvaI CCWGG 1 cut(s) 1071
MvnI CGCG 1 cut(s) 1043
MwoI GCNNNNNNNGC 3 cut(s) 206, 509, 943
NciI CCSGG 3 cut(s) 214, 1138, 1139
NcoI CCATGG 1 cut(s) 16
NdeII GATC 3 cut(s) 163, 295, 1054
NlaIII CATG 5 cut(s) 20, 317, 532, 626, 632
NlaIV GGNNCC 1 cut(s) 1083
NmuCI GTSAC 1 cut(s) 1018
NspI RCATGY 2 cut(s) 532, 626
PagI TCATGA 1 cut(s) 313
PasI CCCWGGG 1 cut(s) 1070
PciI ACATGT 1 cut(s) 528
PctI GAATGC 1 cut(s) 946
PdmI GAANNNNTTC 3 cut(s) 783, 946, 1080
PfeI GAWTC 1 cut(s) 388
PinAI ACCGGT 1 cut(s) 260
PkrI GCNGC 3 cut(s) 211, 499, 502
PleI GAGTC 1 cut(s) 159
PpsI GAGTC 1 cut(s) 159
PscI ACATGT 1 cut(s) 528
PshBI ATTAAT 1 cut(s) 782
Psp124BI GAGCTC 1 cut(s) 385
Psp6I CCWGG 1 cut(s) 1069
PspFI CCCAGC 1 cut(s) 800
PspGI CCWGG 1 cut(s) 1069
PspN4I GGNNCC 1 cut(s) 1083
PspPI GGNCC 2 cut(s) 431, 982
PstNI CAGNNNCTG 1 cut(s) 500
PsuI RGATCY 1 cut(s) 163
PvuII CAGCTG 1 cut(s) 497
RseI CAYNNNNRTG 1 cut(s) 627
SacI GAGCTC 1 cut(s) 385
SaqAI TTAA 4 cut(s) 53, 138, 419, 782
SatI GCNGC 3 cut(s) 210, 498, 501
Sau3AI GATC 3 cut(s) 163, 295, 1054
Sau96I GGNCC 2 cut(s) 431, 982
SchI GAGTC 1 cut(s) 160
ScrFI CCNGG 4 cut(s) 214, 1071, 1138, 1139
SduI GDGCHC 2 cut(s) 237, 385
SfaNI GCATC 3 cut(s) 664, 832, 895
SmaI CCCGGG 1 cut(s) 1139
SmiMI CAYNNNNRTG 1 cut(s) 627
SmlI CTYRAG 2 cut(s) 402, 977
SmoI CTYRAG 2 cut(s) 402, 977
Sse9I AATT 9 cut(s) 158, 372, 395, 472, 614, 762, 779, 783, 989
SsiI CCGC 1 cut(s) 282
SspMI CTAG 1 cut(s) 938
SstI GAGCTC 1 cut(s) 385
StyD4I CCNGG 4 cut(s) 212, 1069, 1136, 1137
StyI CCWWGG 3 cut(s) 16, 118, 228
TaaI ACNGT 2 cut(s) 581, 604
TaqI TCGA 2 cut(s) 87, 819
TaqII GACCGA 1 cut(s) 114
TasI AATT 9 cut(s) 158, 372, 395, 472, 614, 762, 779, 783, 989
TfiI GAWTC 1 cut(s) 388
Tru1I TTAA 4 cut(s) 53, 138, 419, 782
Tru9I TTAA 4 cut(s) 53, 138, 419, 782
TscAI CASTG 1 cut(s) 472
TseFI GTSAC 1 cut(s) 1018
TseI GCWGC 3 cut(s) 209, 497, 500
Tsp45I GTSAC 1 cut(s) 1018
TspDTI ATGAA 6 cut(s) 17, 302, 471, 645, 776, 1106
TspMI CCCGGG 1 cut(s) 1137
TspRI CASTG 1 cut(s) 472
VspI ATTAAT 1 cut(s) 782
XceI RCATGY 2 cut(s) 532, 626
XmaI CCCGGG 1 cut(s) 1137
XmnI GAANNNNTTC 3 cut(s) 783, 946, 1080
XspI CTAG 1 cut(s) 938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.