Prupe.3G245100_v2.0.a1

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
23686135 .. 23688827
2693 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G245100.1

Sequence Viewer

Length: 1161 bp
ATGTTGAAGGAAGAGAGCAATGGCGCTGCTGCCACCAAAAACTGGGCACGTGTTTGCGACACGTGCCGGTCCGCAGCTTGCACGGTGTATTGCCGTGCAGACTCTGCGTACCTGTGCTCTGGCTGCGACGCCACTATCCATGCTGCAAACCGCGTGGCGTCGCGCCACGAGCGCGTGTGGGTCTGCGAGGCGTGTGAGCAGGCCCCGGCGGCTTTCTTATGCAAAGCTGATGCGGCCTCGCTCTGCACTGCCTGTGACGCAGACATCCACTCTGCCAATCCGTTGGCGAGGCGCCACCAACGTGTCCCAATTCTGCCCATCTCCGGTTGCCTGTACGGACCACAGGCAACTGACCCGGGCGAGATAGTGGTGGGGGCCGCTGCAGCGGAGACAGAAGATGGGCTCTTGAGCCAGGAAGGAGATGAAACCATTGATGAGGAAGATGAGGATGAGGCAGCATCATGGTTGTTGCTCAATCCTATGAAAAACAATAACAACAACTGTAACAATAACAATAATCAGAGTAATGGGTTCTTCTTTGGAGTGGAGGTTGATGAGTACTTGGATCTTGTGGAGTACAACTCATCATGTGGTGATCAGAACCAGTTCACTGATCATCATCAGAGTAACCAGCAGCAAGAGCAGCAGCAGCAACATTATGGTGTGCCTGTGCCACACAAGAACTATGGAGGTGATAGTGTTGTGCCAGTTCAGATGCAGAAACAAAGCTTTCATCAGTTGGGTTTGGAGTATGAGTCTTCAAAGGCTGCCTACAGTTACAATGGTTCTCTTAGTAACACTGTCTCTGTTTCGTCCATGGATGTTGGTGTTGTGCCAGACTCAACAATGAGTGATATCTCAATCTCACACCCAAGAACTCCTAAAGGGACAATTGACCTTTTCAGTGGACCTCCCATTCAGATGCCATCCCAACTAAGTCCATTAGACAGGGAGGCCAGGGTCCTAAGATACAGAGAGAAGAAGAAGACAAGGAAGTTTGAGAAAACAATTAGGTATGCCTCAAGGAAGGCCTATGCAGAGACCAGACCCCGGATCAAGGGCCGGTTTGCAAAGAGAACAGAAATGGAAGTTGAAGTGGACCAGATGTTCTCCACAACACTGATGGCAGAAAATGGATATGGCATTGTTCCATCATTCTAA

Protein Analysis

387

Amino Acids

42.63

Weight (kDa)

5.22

Isoelectric Point (pI)

46.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013044)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 291
AccB7I CCANNNNNTGG 1 cut(s) 42
AccII CGCG 3 cut(s) 153, 163, 174
AciI CCGC 6 cut(s) 72, 151, 209, 233, 378, 386
AclWI GGATC 2 cut(s) 573, 1061
AcvI CACGTG 2 cut(s) 50, 63
AcyI GRCGYC 3 cut(s) 129, 158, 292
AfaI GTAC 4 cut(s) 110, 335, 560, 578
AfiI CCNNNNNNNGG 4 cut(s) 42, 323, 1050, 1057
AflIII ACRYGT 3 cut(s) 49, 60, 301
AgsI TTSAA 3 cut(s) 7, 762, 1094
AjnI CCWGG 2 cut(s) 411, 956
AleI CACNNNNGTG 1 cut(s) 300
AloI GAACNNNNNNTCC 2 cut(s) 1091, 1123
AluBI AGCT 3 cut(s) 77, 227, 729
AluI AGCT 3 cut(s) 77, 227, 729
Alw21I GWGCWC 1 cut(s) 119
Alw26I GTCTC 3 cut(s) 383, 808, 1034
AlwI GGATC 2 cut(s) 573, 1061
AlwNI CAGNNNCTG 1 cut(s) 104
Ama87I CYCGRG 1 cut(s) 355
AoxI GGCC 6 cut(s) 201, 234, 375, 954, 1029, 1060
Asp700I GAANNNNTTC 1 cut(s) 605
AspLEI GCGC 4 cut(s) 26, 165, 174, 294
AspS9I GGNCC 8 cut(s) 69, 202, 338, 375, 908, 961, 1060, 1099
AsuC2I CCSGG 4 cut(s) 206, 356, 357, 1051
AsuHPI GGTGA 2 cut(s) 605, 704
AvaI CYCGRG 1 cut(s) 355
AvaII GGWCC 5 cut(s) 69, 338, 908, 961, 1099
BaeGI GKGCMC 1 cut(s) 49
BanI GGYRCC 1 cut(s) 291
BanII GRGCYC 1 cut(s) 405
BauI CACGAG 1 cut(s) 167
BbrPI CACGTG 2 cut(s) 50, 63
BbsI GAAGAC 2 cut(s) 750, 992
Bbv12I GWGCWC 1 cut(s) 119
BccI CCATC 5 cut(s) 326, 392, 934, 1117, 1159
BceAI ACGGC 1 cut(s) 78
BciT130I CCWGG 2 cut(s) 413, 958
BclI TGATCA 2 cut(s) 595, 613
BcnI CCSGG 4 cut(s) 206, 356, 357, 1051
BcoDI GTCTC 3 cut(s) 383, 808, 1034
BfmI CTRYAG 2 cut(s) 381, 772
BfoI RGCGCY 2 cut(s) 27, 295
BglI GCCNNNNNGGC 1 cut(s) 209
BmcAI AGTACT 1 cut(s) 560
Bme1390I CCNGG 6 cut(s) 206, 356, 357, 413, 958, 1051
Bme18I GGWCC 5 cut(s) 69, 338, 908, 961, 1099
BmeT110I CYCGRG 1 cut(s) 355
BmgT120I GGNCC 8 cut(s) 69, 202, 338, 375, 908, 961, 1060, 1099
BmiI GGNNCC 4 cut(s) 204, 293, 376, 962
BmrFI CCNGG 6 cut(s) 206, 356, 357, 413, 958, 1051
BmrI ACTGGG 1 cut(s) 52
BmsI GCATC 4 cut(s) 220, 467, 705, 912
BmuI ACTGGG 1 cut(s) 52
BpiI GAAGAC 2 cut(s) 750, 992
BplI GAGNNNNNCTC 2 cut(s) 566, 598
BpuEI CTTGAG 2 cut(s) 427, 1006
BpuMI CCSGG 4 cut(s) 206, 356, 357, 1051
BsaAI YACGTR 2 cut(s) 50, 63
BsaBI GATNNNNATC 1 cut(s) 618
BsaHI GRCGYC 3 cut(s) 129, 158, 292
BsaI GGTCTC 1 cut(s) 1034
BsaJI CCNNGG 5 cut(s) 204, 355, 816, 957, 1049
BsaWI WCCGGW 1 cut(s) 323
BsaXI ACNNNNNCTCC 4 cut(s) 534, 564, 740, 770
Bsc4I CCNNNNNNNGG 4 cut(s) 42, 323, 1050, 1057
Bse118I RCCGGY 2 cut(s) 66, 1062
Bse1I ACTGG 3 cut(s) 47, 604, 707
Bse3DI GCAATG 1 cut(s) 25
Bse8I GATNNNNATC 1 cut(s) 618
BseBI CCWGG 2 cut(s) 413, 958
BseDI CCNNGG 5 cut(s) 204, 355, 816, 957, 1049
BseGI GGATG 4 cut(s) 264, 454, 826, 926
BseJI GATNNNNATC 1 cut(s) 618
BseLI CCNNNNNNNGG 4 cut(s) 42, 323, 1050, 1057
BseMI GCAATG 1 cut(s) 25
BseNI ACTGG 3 cut(s) 47, 604, 707
BseSI GKGCMC 1 cut(s) 49
BsgI GTGCAG 2 cut(s) 117, 229
Bsh1236I CGCG 3 cut(s) 153, 163, 174
BshFI GGCC 6 cut(s) 203, 236, 377, 956, 1031, 1062
BshNI GGYRCC 1 cut(s) 291
BsiHKAI GWGCWC 1 cut(s) 119
BsiHKCI CYCGRG 1 cut(s) 355
BsiSI CCGG 6 cut(s) 67, 206, 324, 356, 1051, 1063
BslFI GGGAC 2 cut(s) 290, 901
BslI CCNNNNNNNGG 4 cut(s) 42, 323, 1050, 1057
BsmAI GTCTC 3 cut(s) 383, 808, 1034
BsmFI GGGAC 2 cut(s) 290, 901
BsnI GGCC 6 cut(s) 203, 236, 377, 956, 1031, 1062
Bso31I GGTCTC 1 cut(s) 1034
BsoBI CYCGRG 1 cut(s) 355
Bsp1286I GDGCHC 3 cut(s) 49, 119, 405
Bsp143I GATC 4 cut(s) 565, 595, 613, 1053
Bsp19I CCATGG 1 cut(s) 816
BspACI CCGC 6 cut(s) 72, 151, 209, 233, 378, 386
BspANI GGCC 6 cut(s) 203, 236, 377, 956, 1031, 1062
BspFNI CGCG 3 cut(s) 153, 163, 174
BspLI GGNNCC 4 cut(s) 204, 293, 376, 962
BspMAI CTGCAG 1 cut(s) 385
BspPI GGATC 2 cut(s) 573, 1061
BspT107I GGYRCC 1 cut(s) 291
BspTNI GGTCTC 1 cut(s) 1034
BsrDI GCAATG 1 cut(s) 25
BsrFI RCCGGY 2 cut(s) 66, 1062
BsrI ACTGG 3 cut(s) 47, 604, 707
BssAI RCCGGY 2 cut(s) 66, 1062
BssECI CCNNGG 5 cut(s) 204, 355, 816, 957, 1049
BssMI GATC 4 cut(s) 565, 595, 613, 1053
BssNI GRCGYC 3 cut(s) 129, 158, 292
BssSI CACGAG 1 cut(s) 167
BssT1I CCWWGG 1 cut(s) 816
Bst2BI CACGAG 1 cut(s) 167
Bst2UI CCWGG 2 cut(s) 413, 958
Bst4CI ACNGT 4 cut(s) 85, 503, 776, 802
Bst6I CTCTTC 1 cut(s) 6
BstACI GRCGYC 3 cut(s) 129, 158, 292
BstAPI GCANNNNNTGC 1 cut(s) 104
BstBAI YACGTR 2 cut(s) 50, 63
BstC8I GCNNGC 2 cut(s) 79, 201
BstDEI CTNAG 3 cut(s) 791, 935, 965
BstDSI CCRYGG 1 cut(s) 816
BstF5I GGATG 4 cut(s) 264, 454, 826, 926
BstFNI CGCG 3 cut(s) 153, 163, 174
BstH2I RGCGCY 2 cut(s) 27, 295
BstHHI GCGC 4 cut(s) 26, 165, 174, 294
BstKTI GATC 4 cut(s) 568, 598, 616, 1056
BstMAI GTCTC 3 cut(s) 383, 808, 1034
BstMBI GATC 4 cut(s) 565, 595, 613, 1053
BstNI CCWGG 2 cut(s) 413, 958
BstSCI CCNGG 6 cut(s) 204, 354, 355, 411, 956, 1049
BstSFI CTRYAG 2 cut(s) 381, 772
BstSLI GKGCMC 1 cut(s) 49
BstUI CGCG 3 cut(s) 153, 163, 174
BstV2I GAAGAC 2 cut(s) 750, 992
BstX2I RGATCY 1 cut(s) 565
BstXI CCANNNNNNTGG 1 cut(s) 283
BstYI RGATCY 1 cut(s) 565
BsuRI GGCC 6 cut(s) 203, 236, 377, 956, 1031, 1062
BtgI CCRYGG 1 cut(s) 816
BtsCI GGATG 4 cut(s) 264, 454, 826, 926
BtsI GCAGTG 1 cut(s) 246
BtsIMutI CAGTG 5 cut(s) 246, 609, 798, 910, 1118
Cac8I GCNNGC 2 cut(s) 79, 201
CaiI CAGNNNCTG 1 cut(s) 104
CfoI GCGC 4 cut(s) 26, 165, 174, 294
Cfr10I RCCGGY 2 cut(s) 66, 1062
Cfr13I GGNCC 8 cut(s) 69, 202, 338, 375, 908, 961, 1060, 1099
Cfr9I CCCGGG 1 cut(s) 355
CpoI CGGWCCG 1 cut(s) 69
CseI GACGC 3 cut(s) 137, 147, 266
Csp6I GTAC 4 cut(s) 109, 334, 559, 577
CspCI CAANNNNNGTGG 2 cut(s) 135, 170
CspI CGGWCCG 1 cut(s) 69
CviAII CATG 4 cut(s) 140, 462, 588, 817
CviQI GTAC 4 cut(s) 109, 334, 559, 577
DdeI CTNAG 3 cut(s) 791, 935, 965
DinI GGCGCC 1 cut(s) 293
DpnI GATC 4 cut(s) 567, 597, 615, 1055
DpnII GATC 4 cut(s) 565, 595, 613, 1053
Eam1104I CTCTTC 1 cut(s) 6
EarI CTCTTC 1 cut(s) 6
Eco130I CCWWGG 1 cut(s) 816
Eco147I AGGCCT 1 cut(s) 1031
Eco24I GRGCYC 1 cut(s) 405
Eco31I GGTCTC 1 cut(s) 1034
Eco32I GATATC 1 cut(s) 856
Eco47I GGWCC 5 cut(s) 69, 338, 908, 961, 1099
Eco72I CACGTG 2 cut(s) 50, 63
Eco88I CYCGRG 1 cut(s) 355
EcoO109I RGGNCCY 2 cut(s) 202, 961
EcoRII CCWGG 2 cut(s) 411, 956
EcoRV GATATC 1 cut(s) 856
EcoT14I CCWWGG 1 cut(s) 816
EcoT38I GRGCYC 1 cut(s) 405
EgeI GGCGCC 1 cut(s) 293
EheI GGCGCC 1 cut(s) 293
ErhI CCWWGG 1 cut(s) 816
FaeI CATG 4 cut(s) 143, 465, 591, 820
FaqI GGGAC 2 cut(s) 290, 901
FatI CATG 4 cut(s) 139, 461, 587, 816
FbaI TGATCA 2 cut(s) 595, 613
FokI GGATG 4 cut(s) 251, 461, 833, 913
FriOI GRGCYC 1 cut(s) 405
GlaI GCGC 4 cut(s) 25, 164, 173, 293
HaeII RGCGCY 2 cut(s) 27, 295
HaeIII GGCC 6 cut(s) 203, 236, 377, 956, 1031, 1062
HapII CCGG 6 cut(s) 67, 206, 324, 356, 1051, 1063
HgaI GACGC 3 cut(s) 137, 147, 266
HhaI GCGC 4 cut(s) 26, 165, 174, 294
Hin1I GRCGYC 3 cut(s) 129, 158, 292
Hin1II CATG 4 cut(s) 143, 465, 591, 820
Hin6I GCGC 4 cut(s) 24, 163, 172, 292
HinP1I GCGC 4 cut(s) 24, 163, 172, 292
HindIII AAGCTT 1 cut(s) 727
HinfI GANTC 3 cut(s) 101, 755, 839
HpaII CCGG 6 cut(s) 67, 206, 324, 356, 1051, 1063
HphI GGTGA 2 cut(s) 605, 704
Hpy166II GTNNAC 3 cut(s) 609, 908, 1099
Hpy188I TCNGA 5 cut(s) 522, 600, 624, 714, 921
Hpy188III TCNNGA 1 cut(s) 406
Hpy8I GTNNAC 3 cut(s) 609, 908, 1099
Hpy99I CGWCG 2 cut(s) 131, 163
HpyAV CCTTC 2 cut(s) 410, 1021
HpyCH4III ACNGT 4 cut(s) 85, 503, 776, 802
HpyCH4IV ACGT 3 cut(s) 49, 62, 301
HpyCH4V TGCA 9 cut(s) 81, 98, 146, 222, 246, 383, 718, 1037, 1070
HpyF3I CTNAG 3 cut(s) 791, 935, 965
HpySE526I ACGT 3 cut(s) 49, 62, 301
Hsp92I GRCGYC 3 cut(s) 129, 158, 292
Hsp92II CATG 4 cut(s) 143, 465, 591, 820
HspAI GCGC 4 cut(s) 24, 163, 172, 292
KasI GGCGCC 1 cut(s) 291
Ksp22I TGATCA 2 cut(s) 595, 613
Kzo9I GATC 4 cut(s) 565, 595, 613, 1053
LweI GCATC 4 cut(s) 220, 467, 705, 912
MaeII ACGT 3 cut(s) 49, 62, 301
MaeIII GTNAC 5 cut(s) 254, 503, 626, 776, 794
MalI GATC 4 cut(s) 567, 597, 615, 1055
MboI GATC 4 cut(s) 565, 595, 613, 1053
MboII GAAGA 8 cut(s) 23, 407, 452, 526, 750, 991, 994, 997
MfeI CAATTG 1 cut(s) 891
MflI RGATCY 1 cut(s) 565
MhlI GDGCHC 3 cut(s) 49, 119, 405
MluCI AATT 3 cut(s) 309, 891, 1008
Mly113I GGCGCC 1 cut(s) 292
MlyI GAGTC 3 cut(s) 95, 764, 833
MroXI GAANNNNTTC 1 cut(s) 605
MslI CAYNNNNRTG 3 cut(s) 300, 660, 920
MspA1I CMGCKG 2 cut(s) 380, 386
MspI CCGG 6 cut(s) 67, 206, 324, 356, 1051, 1063
MspR9I CCNGG 6 cut(s) 206, 356, 357, 413, 958, 1051
MunI CAATTG 1 cut(s) 891
MvaI CCWGG 2 cut(s) 413, 958
MvnI CGCG 3 cut(s) 153, 163, 174
NarI GGCGCC 1 cut(s) 292
NciI CCSGG 4 cut(s) 206, 356, 357, 1051
NcoI CCATGG 1 cut(s) 816
NdeII GATC 4 cut(s) 565, 595, 613, 1053
NlaIII CATG 4 cut(s) 143, 465, 591, 820
NlaIV GGNNCC 4 cut(s) 204, 293, 376, 962
NmuCI GTSAC 1 cut(s) 254
OliI CACNNNNGTG 1 cut(s) 300
PceI AGGCCT 1 cut(s) 1031
PdmI GAANNNNTTC 1 cut(s) 605
PflMI CCANNNNNTGG 1 cut(s) 42
PleI GAGTC 3 cut(s) 95, 763, 833
PluTI GGCGCC 1 cut(s) 295
PmaCI CACGTG 2 cut(s) 50, 63
PmlI CACGTG 2 cut(s) 50, 63
PpsI GAGTC 3 cut(s) 95, 763, 833
Ppu21I YACGTR 2 cut(s) 50, 63
PpuMI RGGWCCY 1 cut(s) 961
Psp5II RGGWCCY 1 cut(s) 961
Psp6I CCWGG 2 cut(s) 411, 956
PspCI CACGTG 2 cut(s) 50, 63
PspGI CCWGG 2 cut(s) 411, 956
PspN4I GGNNCC 4 cut(s) 204, 293, 376, 962
PspPI GGNCC 8 cut(s) 69, 202, 338, 375, 908, 961, 1060, 1099
PspPPI RGGWCCY 1 cut(s) 961
PstI CTGCAG 1 cut(s) 385
PstNI CAGNNNCTG 1 cut(s) 104
PsuI RGATCY 1 cut(s) 565
RsaI GTAC 4 cut(s) 110, 335, 560, 578
RsaNI GTAC 4 cut(s) 109, 334, 559, 577
RseI CAYNNNNRTG 3 cut(s) 300, 660, 920
Rsr2I CGGWCCG 1 cut(s) 69
RsrII CGGWCCG 1 cut(s) 69
Sau3AI GATC 4 cut(s) 565, 595, 613, 1053
Sau96I GGNCC 8 cut(s) 69, 202, 338, 375, 908, 961, 1060, 1099
ScaI AGTACT 1 cut(s) 560
SchI GAGTC 3 cut(s) 95, 764, 833
ScrFI CCNGG 6 cut(s) 206, 356, 357, 413, 958, 1051
SduI GDGCHC 3 cut(s) 49, 119, 405
SfaNI GCATC 4 cut(s) 220, 467, 705, 912
SfcI CTRYAG 2 cut(s) 381, 772
SfoI GGCGCC 1 cut(s) 293
SinI GGWCC 5 cut(s) 69, 338, 908, 961, 1099
SmaI CCCGGG 1 cut(s) 357
SmiMI CAYNNNNRTG 3 cut(s) 300, 660, 920
SmlI CTYRAG 2 cut(s) 406, 1021
SmoI CTYRAG 2 cut(s) 406, 1021
Sse9I AATT 3 cut(s) 309, 891, 1008
SseBI AGGCCT 1 cut(s) 1031
SsiI CCGC 6 cut(s) 72, 151, 209, 233, 378, 386
SspDI GGCGCC 1 cut(s) 291
StuI AGGCCT 1 cut(s) 1031
StyD4I CCNGG 6 cut(s) 204, 354, 355, 411, 956, 1049
StyI CCWWGG 1 cut(s) 816
TaaI ACNGT 4 cut(s) 85, 503, 776, 802
TaiI ACGT 3 cut(s) 52, 65, 304
TasI AATT 3 cut(s) 309, 891, 1008
TatI WGTACW 2 cut(s) 558, 576
TauI GCSGC 3 cut(s) 212, 236, 380
TscAI CASTG 5 cut(s) 253, 616, 805, 910, 1125
TseFI GTSAC 1 cut(s) 254
Tsp45I GTSAC 1 cut(s) 254
TspDTI ATGAA 3 cut(s) 438, 497, 722
TspGWI ACGGA 2 cut(s) 270, 351
TspMI CCCGGG 1 cut(s) 355
TspRI CASTG 5 cut(s) 253, 616, 805, 910, 1125
Van91I CCANNNNNTGG 1 cut(s) 42
VpaK11BI GGWCC 5 cut(s) 69, 338, 908, 961, 1099
XcmI CCANNNNNNNNNTGG 1 cut(s) 1120
XmaI CCCGGG 1 cut(s) 355
XmnI GAANNNNTTC 1 cut(s) 605
ZrmI AGTACT 1 cut(s) 560
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.