Rh2AG574800

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
80446869 .. 80449439
2571 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG574800.1

Sequence Viewer

Length: 1188 bp
ATGTTGAAGGAAGAGAGCAATGGCGCCGCGGCCGCGAACAGCTGGGCACGTGTTTGCGACACGTGCCGCTCCGCTCCCTGCACGGTCTATTGCCGTGCAGACTCGGCGTACTTATGTTCCGACTGCGACGCCACAATCCACGCGGCCAACCGCGTGGCTTCCCGCCACGAGCGCGTGTGGGTCTGCGAGGCCTGCGAGCGTGCGCCGGCCGCCTTTCTCTGTAAGGCCGACGCAGCCTCGCTCTGCACGGCCTGTGACGCAGACATCCACTCCGCCAACCCTTTGGCCCGTCGCCACCAGCGCGTCCCCATACTCCCCATCTCCGGCTTCCTCCACGGACCAACGGCCACGGACCCCGGCGGTCAGATAATGGTTGGGGCTGCTCCGGCGGATACCACCGAGGACGGGTTCCTGAGCCAGGAAGGAGACGAGGCCATGGACGAAGAAGATGAAGATGAGGCTGCGTCCTGGCTGCTGCTGAATCCGGTGAAGAACAGCAACGGCAACCATAACAGTAACAACAATCCAAATAATAACAACAACGGTTTCTTCTTCGGAGTGGAGGTTGATGAGTACTTGGATTTTGTGGAGTACAACTCATCTGATCAGAACCAGCTCAGTACGACTACTGCTAGTACTGACCAGCATAACCAGTATGGTGTGCCGCACAAGATCAGTTATGGAGGTGATAGTGTTGTACCAGTTCAGTATGGAGAAGGTAAAGTAAACCAGATGCAGATGCAGCAGAAGCATAATTTTCATCAGTTGGGGATGGAATATGGGTCCTCAAAAGCTGCTTATGGTTATGATGGTTCAATTTCTCACACTGTTTCTGTTTCATCCATGGATGTTGGTGTTGTACCAGACTCAACAATGAGCGATATGTCAATCTCTCACCCAAGAACACCGAAAGGAACAATAGACCTTTTCAATGGACCTACAATTCAGATGCCAACCCAACTAAGTCCAATGGACAGGGAGGCCAGGGTCCTCAGATACAGAGAGAAAAAGAAGACGAGGAAGTTTGAGAAAACAATCCGGTATGCCTCAAGGAAGGCCTATGCAGAGACCAGACCCCGGATCAAGGGCCGGTTTGCAAAGCGAACAGACATCGAAGTTGAAGTGGATCAGATGTTCTCCACATCACTCATGGGAGAAACTGGATACGGCATTGTCCCTTCGTACTAA

Protein Analysis

395

Amino Acids

43.4

Weight (kDa)

5.41

Isoelectric Point (pI)

33.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-B_box PF00643 58 - 104 1.5e-07 B-box zinc finger
CCT PF06203 326 - 368 8.3e-18 CCT motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013044)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 23
AccBSI CCGCTC 2 cut(s) 69, 74
AccII CGCG 6 cut(s) 29, 35, 143, 153, 174, 303
AclWI GGATC 2 cut(s) 1088, 1134
AcoI YGGCCR 4 cut(s) 30, 144, 207, 345
AcvI CACGTG 2 cut(s) 50, 63
AcyI GRCGYC 2 cut(s) 24, 129
AfaI GTAC 8 cut(s) 110, 575, 593, 622, 637, 699, 861, 1184
AfiI CCNNNNNNNGG 5 cut(s) 323, 405, 418, 1077, 1084
AflIII ACRYGT 2 cut(s) 49, 60
AgsI TTSAA 4 cut(s) 7, 816, 931, 1121
AjnI CCWGG 3 cut(s) 417, 467, 983
AloI GAACNNNNNNTCC 2 cut(s) 1118, 1150
AluBI AGCT 3 cut(s) 42, 616, 794
AluI AGCT 3 cut(s) 42, 616, 794
Alw26I GTCTC 2 cut(s) 420, 1061
AlwI GGATC 2 cut(s) 1088, 1134
ApeKI GCWGC 7 cut(s) 233, 380, 461, 472, 475, 742, 794
AspLEI GCGC 4 cut(s) 26, 174, 205, 303
AspS9I GGNCC 7 cut(s) 286, 338, 352, 783, 935, 988, 1087
AsuC2I CCSGG 2 cut(s) 357, 1078
AsuHPI GGTGA 3 cut(s) 499, 698, 887
AvaII GGWCC 5 cut(s) 338, 352, 783, 935, 988
BaeGI GKGCMC 1 cut(s) 49
BanI GGYRCC 1 cut(s) 23
BauI CACGAG 1 cut(s) 167
BbrPI CACGTG 2 cut(s) 50, 63
BbsI GAAGAC 1 cut(s) 1019
BbvI GCAGC 7 cut(s) 245, 367, 448, 459, 462, 754, 781
BccI CCATC 3 cut(s) 326, 766, 803
BceAI ACGGC 5 cut(s) 78, 264, 360, 517, 1183
BciT130I CCWGG 3 cut(s) 419, 469, 985
BciVI GTATCC 2 cut(s) 385, 1157
BclI TGATCA 1 cut(s) 604
BcnI CCSGG 2 cut(s) 357, 1078
BcoDI GTCTC 2 cut(s) 420, 1061
BfaI CTAG 1 cut(s) 633
BfoI RGCGCY 1 cut(s) 27
BfuI GTATCC 2 cut(s) 385, 1157
BmcAI AGTACT 2 cut(s) 575, 637
Bme1390I CCNGG 5 cut(s) 357, 419, 469, 985, 1078
Bme18I GGWCC 5 cut(s) 338, 352, 783, 935, 988
BmgT120I GGNCC 7 cut(s) 286, 338, 352, 783, 935, 988, 1087
BmiI GGNNCC 5 cut(s) 25, 354, 410, 784, 989
BmrFI CCNGG 5 cut(s) 357, 419, 469, 985, 1078
BmsI GCATC 3 cut(s) 723, 729, 939
BpiI GAAGAC 1 cut(s) 1019
BplI GAGNNNNNCTC 2 cut(s) 581, 613
Bpu10I CCTNAGC 1 cut(s) 413
BpuEI CTTGAG 1 cut(s) 1033
BpuMI CCSGG 2 cut(s) 357, 1078
BsaAI YACGTR 2 cut(s) 50, 63
BsaHI GRCGYC 2 cut(s) 24, 129
BsaI GGTCTC 1 cut(s) 1061
BsaJI CCNNGG 9 cut(s) 27, 334, 348, 355, 399, 435, 843, 984, 1076
BsaWI WCCGGW 2 cut(s) 484, 1038
BsaXI ACNNNNNCTCC 4 cut(s) 254, 284, 549, 579
Bsc4I CCNNNNNNNGG 5 cut(s) 323, 405, 418, 1077, 1084
Bse118I RCCGGY 2 cut(s) 205, 1089
Bse1I ACTGG 3 cut(s) 652, 701, 1165
Bse3DI GCAATG 1 cut(s) 25
BseBI CCWGG 3 cut(s) 419, 469, 985
BseDI CCNNGG 9 cut(s) 27, 334, 348, 355, 399, 435, 843, 984, 1076
BseGI GGATG 4 cut(s) 264, 777, 839, 853
BseLI CCNNNNNNNGG 5 cut(s) 323, 405, 418, 1077, 1084
BseMI GCAATG 1 cut(s) 25
BseMII CTCAG 3 cut(s) 404, 631, 1006
BseNI ACTGG 3 cut(s) 652, 701, 1165
BseSI GKGCMC 1 cut(s) 49
BseX3I CGGCCG 2 cut(s) 30, 207
BseXI GCAGC 7 cut(s) 245, 367, 448, 459, 462, 754, 781
BseYI CCCAGC 1 cut(s) 42
BsgI GTGCAG 3 cut(s) 64, 117, 229
Bsh1236I CGCG 6 cut(s) 29, 35, 143, 153, 174, 303
Bsh1285I CGRYCG 2 cut(s) 33, 210
BshNI GGYRCC 1 cut(s) 23
BsiEI CGRYCG 2 cut(s) 33, 210
BsiSI CCGG 8 cut(s) 206, 324, 357, 386, 485, 1039, 1078, 1090
BslFI GGGAC 2 cut(s) 290, 1160
BslI CCNNNNNNNGG 5 cut(s) 323, 405, 418, 1077, 1084
BsmAI GTCTC 2 cut(s) 420, 1061
BsmBI CGTCTC 1 cut(s) 420
BsmFI GGGAC 2 cut(s) 290, 1160
Bso31I GGTCTC 1 cut(s) 1061
Bsp1286I GDGCHC 1 cut(s) 49
Bsp143I GATC 4 cut(s) 604, 672, 1080, 1126
Bsp19I CCATGG 2 cut(s) 435, 843
BspCNI CTCAG 3 cut(s) 405, 630, 1005
BspFNI CGCG 6 cut(s) 29, 35, 143, 153, 174, 303
BspLI GGNNCC 5 cut(s) 25, 354, 410, 784, 989
BspPI GGATC 2 cut(s) 1088, 1134
BspT107I GGYRCC 1 cut(s) 23
BspTNI GGTCTC 1 cut(s) 1061
BsrBI CCGCTC 2 cut(s) 69, 74
BsrDI GCAATG 1 cut(s) 25
BsrFI RCCGGY 2 cut(s) 205, 1089
BsrI ACTGG 3 cut(s) 652, 701, 1165
BssAI RCCGGY 2 cut(s) 205, 1089
BssECI CCNNGG 9 cut(s) 27, 334, 348, 355, 399, 435, 843, 984, 1076
BssMI GATC 4 cut(s) 604, 672, 1080, 1126
BssNI GRCGYC 2 cut(s) 24, 129
BssSI CACGAG 1 cut(s) 167
BssT1I CCWWGG 2 cut(s) 435, 843
Bst2BI CACGAG 1 cut(s) 167
Bst2UI CCWGG 3 cut(s) 419, 469, 985
Bst4CI ACNGT 4 cut(s) 85, 515, 545, 829
Bst6I CTCTTC 1 cut(s) 6
BstACI GRCGYC 2 cut(s) 24, 129
BstBAI YACGTR 2 cut(s) 50, 63
BstC8I GCNNGC 4 cut(s) 193, 197, 201, 207
BstDEI CTNAG 4 cut(s) 413, 617, 962, 992
BstDSI CCRYGG 5 cut(s) 27, 334, 348, 435, 843
BstENI CCTNNNNNAGG 1 cut(s) 416
BstF5I GGATG 4 cut(s) 264, 777, 839, 853
BstFNI CGCG 6 cut(s) 29, 35, 143, 153, 174, 303
BstH2I RGCGCY 1 cut(s) 27
BstHHI GCGC 4 cut(s) 26, 174, 205, 303
BstKTI GATC 4 cut(s) 607, 675, 1083, 1129
BstMAI GTCTC 2 cut(s) 420, 1061
BstMBI GATC 4 cut(s) 604, 672, 1080, 1126
BstMCI CGRYCG 2 cut(s) 33, 210
BstNI CCWGG 3 cut(s) 419, 469, 985
BstSCI CCNGG 5 cut(s) 355, 417, 467, 983, 1076
BstSLI GKGCMC 1 cut(s) 49
BstUI CGCG 6 cut(s) 29, 35, 143, 153, 174, 303
BstV1I GCAGC 7 cut(s) 245, 367, 448, 459, 462, 754, 781
BstV2I GAAGAC 1 cut(s) 1019
BstXI CCANNNNNNTGG 2 cut(s) 154, 283
BstZI CGGCCG 2 cut(s) 30, 207
BsuI GTATCC 2 cut(s) 385, 1157
BtgI CCRYGG 5 cut(s) 27, 334, 348, 435, 843
BtsCI GGATG 4 cut(s) 264, 777, 839, 853
BtsIMutI CAGTG 1 cut(s) 825
Cac8I GCNNGC 4 cut(s) 193, 197, 201, 207
CciNI GCGGCCGC 1 cut(s) 30
CfoI GCGC 4 cut(s) 26, 174, 205, 303
Cfr10I RCCGGY 2 cut(s) 205, 1089
Cfr13I GGNCC 7 cut(s) 286, 338, 352, 783, 935, 988, 1087
Cfr42I CCGCGG 1 cut(s) 30
CseI GACGC 5 cut(s) 137, 239, 266, 292, 453
Csp6I GTAC 8 cut(s) 109, 574, 592, 621, 636, 698, 860, 1183
CviAII CATG 3 cut(s) 436, 844, 1150
CviQI GTAC 8 cut(s) 109, 574, 592, 621, 636, 698, 860, 1183
DdeI CTNAG 4 cut(s) 413, 617, 962, 992
DinI GGCGCC 1 cut(s) 25
DpnI GATC 4 cut(s) 606, 674, 1082, 1128
DpnII GATC 4 cut(s) 604, 672, 1080, 1126
EaeI YGGCCR 4 cut(s) 30, 144, 207, 345
EagI CGGCCG 2 cut(s) 30, 207
Eam1104I CTCTTC 1 cut(s) 6
EarI CTCTTC 1 cut(s) 6
EciI GGCGGA 2 cut(s) 262, 404
EclXI CGGCCG 2 cut(s) 30, 207
Eco130I CCWWGG 2 cut(s) 435, 843
Eco147I AGGCCT 2 cut(s) 191, 1058
Eco31I GGTCTC 1 cut(s) 1061
Eco47I GGWCC 5 cut(s) 338, 352, 783, 935, 988
Eco52I CGGCCG 2 cut(s) 30, 207
Eco72I CACGTG 2 cut(s) 50, 63
EcoNI CCTNNNNNAGG 1 cut(s) 416
EcoO109I RGGNCCY 2 cut(s) 783, 988
EcoRII CCWGG 3 cut(s) 417, 467, 983
EcoT14I CCWWGG 2 cut(s) 435, 843
EgeI GGCGCC 1 cut(s) 25
EheI GGCGCC 1 cut(s) 25
ErhI CCWWGG 2 cut(s) 435, 843
Esp3I CGTCTC 1 cut(s) 420
FaeI CATG 3 cut(s) 439, 847, 1153
FaqI GGGAC 2 cut(s) 290, 1160
FatI CATG 3 cut(s) 435, 843, 1149
FauI CCCGC 1 cut(s) 170
FbaI TGATCA 1 cut(s) 604
FokI GGATG 4 cut(s) 251, 784, 826, 860
FspBI CTAG 1 cut(s) 633
GlaI GCGC 4 cut(s) 25, 173, 204, 302
GsaI CCCAGC 1 cut(s) 46
HaeII RGCGCY 1 cut(s) 27
HapII CCGG 8 cut(s) 206, 324, 357, 386, 485, 1039, 1078, 1090
HgaI GACGC 5 cut(s) 137, 239, 266, 292, 453
HhaI GCGC 4 cut(s) 26, 174, 205, 303
Hin1I GRCGYC 2 cut(s) 24, 129
Hin1II CATG 3 cut(s) 439, 847, 1153
Hin6I GCGC 4 cut(s) 24, 172, 203, 301
HinP1I GCGC 4 cut(s) 24, 172, 203, 301
HinfI GANTC 3 cut(s) 101, 481, 866
HpaII CCGG 8 cut(s) 206, 324, 357, 386, 485, 1039, 1078, 1090
HphI GGTGA 3 cut(s) 499, 698, 887
Hpy166II GTNNAC 1 cut(s) 727
Hpy188I TCNGA 8 cut(s) 121, 366, 557, 604, 609, 948, 995, 1131
Hpy188III TCNNGA 1 cut(s) 412
Hpy8I GTNNAC 1 cut(s) 727
Hpy99I CGWCG 3 cut(s) 131, 233, 294
HpyAV CCTTC 4 cut(s) 416, 710, 1048, 1188
HpyCH4III ACNGT 4 cut(s) 85, 515, 545, 829
HpyCH4IV ACGT 2 cut(s) 49, 62
HpyCH4V TGCA 7 cut(s) 81, 98, 246, 736, 742, 1064, 1097
HpyF3I CTNAG 4 cut(s) 413, 617, 962, 992
HpySE526I ACGT 2 cut(s) 49, 62
Hsp92I GRCGYC 2 cut(s) 24, 129
Hsp92II CATG 3 cut(s) 439, 847, 1153
HspAI GCGC 4 cut(s) 24, 172, 203, 301
KasI GGCGCC 1 cut(s) 23
KroI GCCGGC 1 cut(s) 205
KroNI GCCGGC 1 cut(s) 207
Ksp22I TGATCA 1 cut(s) 604
KspI CCGCGG 1 cut(s) 30
Kzo9I GATC 4 cut(s) 604, 672, 1080, 1126
LmnI GCTCC 3 cut(s) 74, 79, 388
Lsp1109I GCAGC 7 cut(s) 245, 367, 448, 459, 462, 754, 781
LweI GCATC 3 cut(s) 723, 729, 939
MaeI CTAG 1 cut(s) 633
MaeII ACGT 2 cut(s) 49, 62
MaeIII GTNAC 2 cut(s) 254, 515
MalI GATC 4 cut(s) 606, 674, 1082, 1128
MbiI CCGCTC 2 cut(s) 69, 74
MboI GATC 4 cut(s) 604, 672, 1080, 1126
MboII GAAGA 8 cut(s) 23, 455, 458, 464, 502, 541, 544, 1024
MhlI GDGCHC 1 cut(s) 49
MluCI AATT 3 cut(s) 754, 816, 942
Mly113I GGCGCC 1 cut(s) 24
MlyI GAGTC 2 cut(s) 95, 860
MmeI TCCRAC 1 cut(s) 144
MroNI GCCGGC 1 cut(s) 205
MspA1I CMGCKG 2 cut(s) 29, 42
MspI CCGG 8 cut(s) 206, 324, 357, 386, 485, 1039, 1078, 1090
MspR9I CCNGG 5 cut(s) 357, 419, 469, 985, 1078
MvaI CCWGG 3 cut(s) 419, 469, 985
MvnI CGCG 6 cut(s) 29, 35, 143, 153, 174, 303
NaeI GCCGGC 1 cut(s) 207
NarI GGCGCC 1 cut(s) 24
NciI CCSGG 2 cut(s) 357, 1078
NcoI CCATGG 2 cut(s) 435, 843
NdeII GATC 4 cut(s) 604, 672, 1080, 1126
NgoMIV GCCGGC 1 cut(s) 205
NlaIII CATG 3 cut(s) 439, 847, 1153
NlaIV GGNNCC 5 cut(s) 25, 354, 410, 784, 989
NmeAIII GCCGAG 1 cut(s) 83
NmuCI GTSAC 1 cut(s) 254
NotI GCGGCCGC 1 cut(s) 30
PceI AGGCCT 2 cut(s) 191, 1058
PdiI GCCGGC 1 cut(s) 207
PfeI GAWTC 1 cut(s) 481
PleI GAGTC 2 cut(s) 95, 860
PluTI GGCGCC 1 cut(s) 27
PmaCI CACGTG 2 cut(s) 50, 63
PmlI CACGTG 2 cut(s) 50, 63
PpsI GAGTC 2 cut(s) 95, 860
Ppu21I YACGTR 2 cut(s) 50, 63
PpuMI RGGWCCY 2 cut(s) 783, 988
Psp5II RGGWCCY 2 cut(s) 783, 988
Psp6I CCWGG 3 cut(s) 417, 467, 983
PspCI CACGTG 2 cut(s) 50, 63
PspFI CCCAGC 1 cut(s) 42
PspGI CCWGG 3 cut(s) 417, 467, 983
PspN4I GGNNCC 5 cut(s) 25, 354, 410, 784, 989
PspPI GGNCC 7 cut(s) 286, 338, 352, 783, 935, 988, 1087
PspPPI RGGWCCY 2 cut(s) 783, 988
PvuII CAGCTG 1 cut(s) 42
RsaI GTAC 8 cut(s) 110, 575, 593, 622, 637, 699, 861, 1184
RsaNI GTAC 8 cut(s) 109, 574, 592, 621, 636, 698, 860, 1183
SacII CCGCGG 1 cut(s) 30
Sau3AI GATC 4 cut(s) 604, 672, 1080, 1126
Sau96I GGNCC 7 cut(s) 286, 338, 352, 783, 935, 988, 1087
ScaI AGTACT 2 cut(s) 575, 637
SchI GAGTC 2 cut(s) 95, 860
ScrFI CCNGG 5 cut(s) 357, 419, 469, 985, 1078
SduI GDGCHC 1 cut(s) 49
SfaNI GCATC 3 cut(s) 723, 729, 939
SfoI GGCGCC 1 cut(s) 25
Sfr303I CCGCGG 1 cut(s) 30
SgrBI CCGCGG 1 cut(s) 30
SinI GGWCC 5 cut(s) 338, 352, 783, 935, 988
SmlI CTYRAG 1 cut(s) 1048
SmoI CTYRAG 1 cut(s) 1048
Sse9I AATT 3 cut(s) 754, 816, 942
SseBI AGGCCT 2 cut(s) 191, 1058
SspDI GGCGCC 1 cut(s) 23
SspMI CTAG 1 cut(s) 633
StuI AGGCCT 2 cut(s) 191, 1058
StyD4I CCNGG 5 cut(s) 355, 417, 467, 983, 1076
StyI CCWWGG 2 cut(s) 435, 843
TaaI ACNGT 4 cut(s) 85, 515, 545, 829
TaiI ACGT 2 cut(s) 52, 65
TaqI TCGA 1 cut(s) 1113
TasI AATT 3 cut(s) 754, 816, 942
TatI WGTACW 3 cut(s) 573, 591, 635
TauI GCSGC 7 cut(s) 29, 32, 35, 69, 146, 212, 667
TfiI GAWTC 1 cut(s) 481
TscAI CASTG 1 cut(s) 832
TseFI GTSAC 1 cut(s) 254
TseI GCWGC 7 cut(s) 233, 380, 461, 472, 475, 742, 794
Tsp45I GTSAC 1 cut(s) 254
TspDTI ATGAA 3 cut(s) 465, 749, 828
TspGWI ACGGA 2 cut(s) 351, 365
TspRI CASTG 1 cut(s) 832
VpaK11BI GGWCC 5 cut(s) 338, 352, 783, 935, 988
XagI CCTNNNNNAGG 1 cut(s) 416
XcmI CCANNNNNNNNNTGG 1 cut(s) 1147
XspI CTAG 1 cut(s) 633
ZrmI AGTACT 2 cut(s) 575, 637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.