pycom09g00590

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
455143 .. 457280
2138 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g00590.2

Sequence Viewer

Length: 1197 bp
ATGTTGAAGGAAGATCAGAGCAATGGGACTGCTGCCAACCACAACTGGGCACGTGTTTGCGACACGTGCCGGGCAGCAGCTTGCACGGTGTTCTGTCGTGCAGACTCGGCGTACCTATGCTCGGGCTGCGACGCCACCATTCATGCGGCTAATTGTGTGGCGTCGCGCCATGAGCGTGTGTGGGTATGCGAGGCGTGCGAGCGTGCCCCAGCCGCTTTTCTGTGCAAAGCGGATTCGGCCTCGCTTTGCACGGCCTGCGACGCGGACATCCACTCTGCCAATCCTCTGGCGAGGCGCCACCAGCGCGTGCCCATCCTGCCTATTTCTGGTTGCCCGTACGGCCCTCAGGCAATTGAACAAGGCAGGATGAAGTTGGTGAGGTCCGCCACGGCGGAGATGGAGGATGGGTTTGTGAGCCAGGAAGGAGATGAAACCATTGATGAGGAAGATGAGGATGAGGCAGCATCATGGTTGTTGCTCAACCCAGTGAAAAACAACAACAACAACAACAACACCACCACCACCACCACAAAGAACAATGGGCTTTTCTTTGGAGTGGAGGTTGATGAGTATTTGGATCTTGTGGAGTACAACTCATGTGCTGATCAGAATAATCAGTTCACAGATCATCATCAGCAAGAACAGCAGCAGGAACAACGTTATGGGGTCCCACACAAGAATTATGGAGGAGATAGTGTTGTGCCAGTTCATCAGTATGGAGAAGTAGGGAAAGCCCACCAGATGCAGCAGCTGCAGAAGCAAAGTTTTCATCAGTTGGGTTTGGAGTATGAGTCCTCAAAAGCTGCATACAGTTACAATGGTTCTCTAAGTCACAGTGTTTCTGTTTCATCCATGGATGTTGGAGTTGTACCGAATTCAACGATGATCGATATCTCAATTTCGGACCCGAGAACTCCCAAAGGAACTATTGACCTTTTCAGTCGATCTTCCATTCAAATGCCAACCCAACTAAGTCCAATGGACAGGGAGGCCAGGGTTCTCAGGTACAGAGAGAAGAAAAAGACGAGGAAGTTTGAGAAAACAATCCGGTATGCCTCAAGGAAGGCCTACGCCGAGACCAGACCCCGAATCAAGGGCCGATTTGCAAAGCGAACTGAAATGGAAGTTGAAGTCGACCAAATGTTCTCCACAACGCTGATGGCGGAAAATGGATATGGCATTGTTCCATCATTCTAG

Protein Analysis

399

Amino Acids

44.44

Weight (kDa)

5.78

Isoelectric Point (pI)

42.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013044)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 294
AccI GTMKAC 1 cut(s) 1134
AccII CGCG 3 cut(s) 166, 263, 306
AciI CCGC 7 cut(s) 146, 213, 230, 263, 384, 392, 1163
AclI AACGTT 1 cut(s) 658
AclWI GGATC 1 cut(s) 585
AcsI RAATTY 1 cut(s) 874
AcvI CACGTG 2 cut(s) 53, 66
AcyI GRCGYC 3 cut(s) 132, 161, 295
AfaI GTAC 5 cut(s) 113, 338, 590, 870, 1007
AfiI CCNNNNNNNGG 4 cut(s) 46, 121, 326, 1093
AflIII ACRYGT 2 cut(s) 52, 63
AgsI TTSAA 5 cut(s) 7, 356, 879, 956, 1130
AjnI CCWGG 2 cut(s) 417, 992
AluBI AGCT 3 cut(s) 80, 751, 803
AluI AGCT 3 cut(s) 80, 751, 803
Alw26I GTCTC 1 cut(s) 1070
AlwI GGATC 1 cut(s) 585
AlwNI CAGNNNCTG 1 cut(s) 751
Ama87I CYCGRG 2 cut(s) 121, 907
AoxI GGCC 6 cut(s) 237, 252, 340, 990, 1065, 1096
ApoI RAATTY 1 cut(s) 874
AspLEI GCGC 3 cut(s) 168, 297, 306
AspS9I GGNCC 5 cut(s) 341, 381, 667, 904, 1096
AsuC2I CCSGG 1 cut(s) 71
AsuHPI GGTGA 1 cut(s) 388
AvaI CYCGRG 2 cut(s) 121, 907
AvaII GGWCC 3 cut(s) 381, 667, 904
AxyI CCTNAGG 1 cut(s) 345
BaeGI GKGCMC 3 cut(s) 52, 208, 312
BanI GGYRCC 1 cut(s) 294
BbrPI CACGTG 2 cut(s) 53, 66
BccI CCATC 5 cut(s) 320, 391, 398, 1153, 1195
BceAI ACGGC 3 cut(s) 267, 355, 405
BciT130I CCWGG 2 cut(s) 419, 994
BclI TGATCA 1 cut(s) 604
BcnI CCSGG 1 cut(s) 71
BcoDI GTCTC 1 cut(s) 1070
BfaI CTAG 1 cut(s) 1195
BfmI CTRYAG 1 cut(s) 752
BfoI RGCGCY 1 cut(s) 298
BglI GCCNNNNNGGC 1 cut(s) 339
Bme1390I CCNGG 3 cut(s) 71, 419, 994
Bme18I GGWCC 3 cut(s) 381, 667, 904
BmeT110I CYCGRG 2 cut(s) 121, 907
BmgT120I GGNCC 5 cut(s) 341, 381, 667, 904, 1096
BmiI GGNNCC 4 cut(s) 296, 668, 669, 906
BmrFI CCNGG 3 cut(s) 71, 419, 994
BmrI ACTGGG 2 cut(s) 55, 479
BmsI GCATC 2 cut(s) 473, 732
BmuI ACTGGG 2 cut(s) 55, 479
BplI GAGNNNNNCTC 2 cut(s) 578, 610
BpuEI CTTGAG 1 cut(s) 1042
BpuMI CCSGG 1 cut(s) 71
Bsa29I ATCGAT 1 cut(s) 888
BsaAI YACGTR 2 cut(s) 53, 66
BsaBI GATNNNNATC 2 cut(s) 630, 890
BsaHI GRCGYC 3 cut(s) 132, 161, 295
BsaI GGTCTC 1 cut(s) 1070
BsaJI CCNNGG 3 cut(s) 387, 852, 993
BsaWI WCCGGW 1 cut(s) 1047
BsaXI ACNNNNNCTCC 8 cut(s) 392, 422, 546, 576, 681, 711, 776, 806
Bsc4I CCNNNNNNNGG 4 cut(s) 46, 121, 326, 1093
Bse1I ACTGG 3 cut(s) 50, 485, 704
Bse21I CCTNAGG 1 cut(s) 345
Bse3DI GCAATG 1 cut(s) 28
Bse8I GATNNNNATC 2 cut(s) 630, 890
BseBI CCWGG 2 cut(s) 419, 994
BseCI ATCGAT 1 cut(s) 888
BseDI CCNNGG 3 cut(s) 387, 852, 993
BseGI GGATG 7 cut(s) 267, 312, 372, 409, 460, 848, 862
BseJI GATNNNNATC 2 cut(s) 630, 890
BseLI CCNNNNNNNGG 4 cut(s) 46, 121, 326, 1093
BseMI GCAATG 1 cut(s) 28
BseMII CTCAG 2 cut(s) 359, 1015
BseNI ACTGG 3 cut(s) 50, 485, 704
BseRI GAGGAG 1 cut(s) 702
BseSI GKGCMC 3 cut(s) 52, 208, 312
BseYI CCCAGC 1 cut(s) 208
BsgI GTGCAG 1 cut(s) 120
Bsh1236I CGCG 3 cut(s) 166, 263, 306
BshFI GGCC 6 cut(s) 239, 254, 342, 992, 1067, 1098
BshNI GGYRCC 1 cut(s) 294
BshVI ATCGAT 1 cut(s) 888
BsiHKCI CYCGRG 2 cut(s) 121, 907
BsiSI CCGG 2 cut(s) 70, 1048
BsiWI CGTACG 1 cut(s) 336
BslFI GGGAC 2 cut(s) 40, 653
BslI CCNNNNNNNGG 4 cut(s) 46, 121, 326, 1093
BsmAI GTCTC 1 cut(s) 1070
BsmFI GGGAC 2 cut(s) 40, 653
BsnI GGCC 6 cut(s) 239, 254, 342, 992, 1067, 1098
Bso31I GGTCTC 1 cut(s) 1070
BsoBI CYCGRG 2 cut(s) 121, 907
Bsp1286I GDGCHC 3 cut(s) 52, 208, 312
Bsp143I GATC 6 cut(s) 13, 577, 604, 625, 885, 944
Bsp19I CCATGG 1 cut(s) 852
BspACI CCGC 7 cut(s) 146, 213, 230, 263, 384, 392, 1163
BspANI GGCC 6 cut(s) 239, 254, 342, 992, 1067, 1098
BspCNI CTCAG 2 cut(s) 358, 1014
BspDI ATCGAT 1 cut(s) 888
BspFNI CGCG 3 cut(s) 166, 263, 306
BspLI GGNNCC 4 cut(s) 296, 668, 669, 906
BspMAI CTGCAG 1 cut(s) 756
BspPI GGATC 1 cut(s) 585
BspT107I GGYRCC 1 cut(s) 294
BspTNI GGTCTC 1 cut(s) 1070
BsrDI GCAATG 1 cut(s) 28
BsrI ACTGG 3 cut(s) 50, 485, 704
BssECI CCNNGG 3 cut(s) 387, 852, 993
BssMI GATC 6 cut(s) 13, 577, 604, 625, 885, 944
BssNI GRCGYC 3 cut(s) 132, 161, 295
BssT1I CCWWGG 1 cut(s) 852
Bst2UI CCWGG 2 cut(s) 419, 994
Bst4CI ACNGT 3 cut(s) 88, 812, 836
BstACI GRCGYC 3 cut(s) 132, 161, 295
BstAPI GCANNNNNTGC 2 cut(s) 255, 751
BstBAI YACGTR 2 cut(s) 53, 66
BstC8I GCNNGC 6 cut(s) 82, 196, 200, 204, 256, 308
BstDEI CTNAG 4 cut(s) 345, 827, 971, 1001
BstDSI CCRYGG 2 cut(s) 387, 852
BstF5I GGATG 7 cut(s) 267, 312, 372, 409, 460, 848, 862
BstFNI CGCG 3 cut(s) 166, 263, 306
BstH2I RGCGCY 1 cut(s) 298
BstHHI GCGC 3 cut(s) 168, 297, 306
BstKTI GATC 6 cut(s) 16, 580, 607, 628, 888, 947
BstMAI GTCTC 1 cut(s) 1070
BstMBI GATC 6 cut(s) 13, 577, 604, 625, 885, 944
BstNI CCWGG 2 cut(s) 419, 994
BstSCI CCNGG 3 cut(s) 69, 417, 992
BstSFI CTRYAG 1 cut(s) 752
BstSLI GKGCMC 3 cut(s) 52, 208, 312
BstUI CGCG 3 cut(s) 166, 263, 306
BstX2I RGATCY 1 cut(s) 577
BstXI CCANNNNNNTGG 1 cut(s) 286
BstYI RGATCY 1 cut(s) 577
Bsu15I ATCGAT 1 cut(s) 888
Bsu36I CCTNAGG 1 cut(s) 345
BsuRI GGCC 6 cut(s) 239, 254, 342, 992, 1067, 1098
BsuTUI ATCGAT 1 cut(s) 888
BtgI CCRYGG 2 cut(s) 387, 852
BtsCI GGATG 7 cut(s) 267, 312, 372, 409, 460, 848, 862
BtsIMutI CAGTG 2 cut(s) 492, 841
Cac8I GCNNGC 6 cut(s) 82, 196, 200, 204, 256, 308
CaiI CAGNNNCTG 1 cut(s) 751
CfoI GCGC 3 cut(s) 168, 297, 306
Cfr13I GGNCC 5 cut(s) 341, 381, 667, 904, 1096
ClaI ATCGAT 1 cut(s) 888
CseI GACGC 3 cut(s) 140, 150, 269
Csp6I GTAC 5 cut(s) 112, 337, 589, 869, 1006
CviAII CATG 5 cut(s) 143, 170, 468, 597, 853
CviQI GTAC 5 cut(s) 112, 337, 589, 869, 1006
DdeI CTNAG 4 cut(s) 345, 827, 971, 1001
DinI GGCGCC 1 cut(s) 296
DpnI GATC 6 cut(s) 15, 579, 606, 627, 887, 946
DpnII GATC 6 cut(s) 13, 577, 604, 625, 885, 944
EciI GGCGGA 3 cut(s) 373, 407, 1178
Eco130I CCWWGG 1 cut(s) 852
Eco147I AGGCCT 1 cut(s) 1067
Eco31I GGTCTC 1 cut(s) 1070
Eco32I GATATC 1 cut(s) 892
Eco47I GGWCC 3 cut(s) 381, 667, 904
Eco72I CACGTG 2 cut(s) 53, 66
Eco81I CCTNAGG 1 cut(s) 345
Eco88I CYCGRG 2 cut(s) 121, 907
EcoO109I RGGNCCY 1 cut(s) 667
EcoRI GAATTC 1 cut(s) 874
EcoRII CCWGG 2 cut(s) 417, 992
EcoRV GATATC 1 cut(s) 892
EcoT14I CCWWGG 1 cut(s) 852
EgeI GGCGCC 1 cut(s) 296
EheI GGCGCC 1 cut(s) 296
ErhI CCWWGG 1 cut(s) 852
FaeI CATG 5 cut(s) 146, 173, 471, 600, 856
FaqI GGGAC 2 cut(s) 40, 653
FatI CATG 5 cut(s) 142, 169, 467, 596, 852
FbaI TGATCA 1 cut(s) 604
FblI GTMKAC 1 cut(s) 1134
FokI GGATG 7 cut(s) 254, 299, 379, 416, 467, 835, 869
FspBI CTAG 1 cut(s) 1195
GlaI GCGC 3 cut(s) 167, 296, 305
GsaI CCCAGC 1 cut(s) 212
HaeII RGCGCY 1 cut(s) 298
HaeIII GGCC 6 cut(s) 239, 254, 342, 992, 1067, 1098
HapII CCGG 2 cut(s) 70, 1048
HgaI GACGC 3 cut(s) 140, 150, 269
HhaI GCGC 3 cut(s) 168, 297, 306
Hin1I GRCGYC 3 cut(s) 132, 161, 295
Hin1II CATG 5 cut(s) 146, 173, 471, 600, 856
Hin6I GCGC 3 cut(s) 166, 295, 304
HinP1I GCGC 3 cut(s) 166, 295, 304
HincII GTYRAC 1 cut(s) 1135
HindII GTYRAC 1 cut(s) 1135
HinfI GANTC 4 cut(s) 104, 233, 791, 1089
HpaII CCGG 2 cut(s) 70, 1048
HphI GGTGA 1 cut(s) 388
Hpy166II GTNNAC 2 cut(s) 621, 1135
Hpy188I TCNGA 3 cut(s) 18, 609, 904
Hpy8I GTNNAC 2 cut(s) 621, 1135
Hpy99I CGWCG 3 cut(s) 134, 166, 263
HpyAV CCTTC 2 cut(s) 416, 1057
HpyCH4III ACNGT 3 cut(s) 88, 812, 836
HpyCH4IV ACGT 3 cut(s) 52, 65, 658
HpyCH4V TGCA 8 cut(s) 84, 101, 225, 249, 745, 754, 806, 1106
HpyF3I CTNAG 4 cut(s) 345, 827, 971, 1001
HpySE526I ACGT 3 cut(s) 52, 65, 658
Hsp92I GRCGYC 3 cut(s) 132, 161, 295
Hsp92II CATG 5 cut(s) 146, 173, 471, 600, 856
HspAI GCGC 3 cut(s) 166, 295, 304
KasI GGCGCC 1 cut(s) 294
KflI GGGWCCC 1 cut(s) 667
Ksp22I TGATCA 1 cut(s) 604
Kzo9I GATC 6 cut(s) 13, 577, 604, 625, 885, 944
LweI GCATC 2 cut(s) 473, 732
MaeI CTAG 1 cut(s) 1195
MaeII ACGT 3 cut(s) 52, 65, 658
MaeIII GTNAC 2 cut(s) 812, 830
MalI GATC 6 cut(s) 15, 579, 606, 627, 887, 946
MboI GATC 6 cut(s) 13, 577, 604, 625, 885, 944
MboII GAAGA 4 cut(s) 23, 458, 939, 1027
MfeI CAATTG 1 cut(s) 351
MflI RGATCY 1 cut(s) 577
MhlI GDGCHC 3 cut(s) 52, 208, 312
MluCI AATT 5 cut(s) 151, 351, 679, 874, 897
Mly113I GGCGCC 1 cut(s) 295
MlyI GAGTC 2 cut(s) 98, 800
MmeI TCCRAC 1 cut(s) 841
MslI CAYNNNNRTG 3 cut(s) 174, 714, 956
MspA1I CMGCKG 1 cut(s) 751
MspI CCGG 2 cut(s) 70, 1048
MspR9I CCNGG 3 cut(s) 71, 419, 994
MunI CAATTG 1 cut(s) 351
MvaI CCWGG 2 cut(s) 419, 994
MvnI CGCG 3 cut(s) 166, 263, 306
NarI GGCGCC 1 cut(s) 295
NciI CCSGG 1 cut(s) 71
NcoI CCATGG 1 cut(s) 852
NdeII GATC 6 cut(s) 13, 577, 604, 625, 885, 944
NlaIII CATG 5 cut(s) 146, 173, 471, 600, 856
NlaIV GGNNCC 4 cut(s) 296, 668, 669, 906
NmeAIII GCCGAG 2 cut(s) 86, 1099
NmuCI GTSAC 1 cut(s) 830
PceI AGGCCT 1 cut(s) 1067
PfeI GAWTC 2 cut(s) 233, 1089
Pfl23II CGTACG 1 cut(s) 336
PleI GAGTC 2 cut(s) 98, 799
PluTI GGCGCC 1 cut(s) 298
PmaCI CACGTG 2 cut(s) 53, 66
PmlI CACGTG 2 cut(s) 53, 66
PpsI GAGTC 2 cut(s) 98, 799
Ppu21I YACGTR 2 cut(s) 53, 66
PpuMI RGGWCCY 1 cut(s) 667
Psp1406I AACGTT 1 cut(s) 658
Psp5II RGGWCCY 1 cut(s) 667
Psp6I CCWGG 2 cut(s) 417, 992
PspCI CACGTG 2 cut(s) 53, 66
PspFI CCCAGC 1 cut(s) 208
PspGI CCWGG 2 cut(s) 417, 992
PspLI CGTACG 1 cut(s) 336
PspN4I GGNNCC 4 cut(s) 296, 668, 669, 906
PspPI GGNCC 5 cut(s) 341, 381, 667, 904, 1096
PspPPI RGGWCCY 1 cut(s) 667
PstI CTGCAG 1 cut(s) 756
PstNI CAGNNNCTG 1 cut(s) 751
PsuI RGATCY 1 cut(s) 577
PvuII CAGCTG 1 cut(s) 751
RsaI GTAC 5 cut(s) 113, 338, 590, 870, 1007
RsaNI GTAC 5 cut(s) 112, 337, 589, 869, 1006
RseI CAYNNNNRTG 3 cut(s) 174, 714, 956
SalI GTCGAC 1 cut(s) 1133
Sau3AI GATC 6 cut(s) 13, 577, 604, 625, 885, 944
Sau96I GGNCC 5 cut(s) 341, 381, 667, 904, 1096
SchI GAGTC 2 cut(s) 98, 800
ScrFI CCNGG 3 cut(s) 71, 419, 994
SduI GDGCHC 3 cut(s) 52, 208, 312
SfaNI GCATC 2 cut(s) 473, 732
SfcI CTRYAG 1 cut(s) 752
SfoI GGCGCC 1 cut(s) 296
SinI GGWCC 3 cut(s) 381, 667, 904
SmiMI CAYNNNNRTG 3 cut(s) 174, 714, 956
SmlI CTYRAG 1 cut(s) 1057
SmoI CTYRAG 1 cut(s) 1057
Sse9I AATT 5 cut(s) 151, 351, 679, 874, 897
SseBI AGGCCT 1 cut(s) 1067
SsiI CCGC 7 cut(s) 146, 213, 230, 263, 384, 392, 1163
SspDI GGCGCC 1 cut(s) 294
SspMI CTAG 1 cut(s) 1195
StuI AGGCCT 1 cut(s) 1067
StyD4I CCNGG 3 cut(s) 69, 417, 992
StyI CCWWGG 1 cut(s) 852
TaaI ACNGT 3 cut(s) 88, 812, 836
TaiI ACGT 3 cut(s) 55, 68, 661
TaqI TCGA 3 cut(s) 888, 943, 1134
TasI AATT 5 cut(s) 151, 351, 679, 874, 897
TatI WGTACW 1 cut(s) 588
TauI GCSGC 2 cut(s) 149, 215
TfiI GAWTC 2 cut(s) 233, 1089
TscAI CASTG 2 cut(s) 492, 841
TseFI GTSAC 1 cut(s) 830
Tsp45I GTSAC 1 cut(s) 830
TspDTI ATGAA 6 cut(s) 131, 383, 444, 698, 758, 837
TspRI CASTG 2 cut(s) 492, 841
VpaK11BI GGWCC 3 cut(s) 381, 667, 904
XapI RAATTY 1 cut(s) 874
XcmI CCANNNNNNNNNTGG 2 cut(s) 394, 1156
XmiI GTMKAC 1 cut(s) 1134
XspI CTAG 1 cut(s) 1195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.