pycom17g06970

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
5024714 .. 5026853
2140 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g06970.2

Sequence Viewer

Length: 1206 bp
ATGTTGAAGGAAGATCAGAGCAATGGCACTGCTACCGCCAACAACTGGGCTCGTGTTTGTGATACGTGCCGGGCAGCTGCATGCACGGTGTACTGTCGTGCAGACTCCGCGTACCTCTGCTCGGGCTGCGACGCCACCATTCATGCTGCCAATCGCTTGGCGTCGCGCCATGAGCGCGTGTGGGTATGTGAGGCCTGCGAGCGTGCTCCGGCCGCTTTCCTGTGCAAAGCGGATGCAGCGTCGCTCTGCACTGCCTGCGACGCGGACATCCATTCCGCCAATCCTCTAGCGAGGCGTCACCAGCGCGTCCCCATCCTGCCCATCTCCGGTTGCTTGTACAGCTCTCAGGCAACCGAACAAGGCGGGATGGGAGTGGTTGTGTCTGCTGGGGCGGAGACAGAAGATGGGTTCCTGAGCCAGGAAGGAGATGATACCATTGATGAGGAAGATGAGGATGAGGCAGCATCTTGGTTGTTGCTCAACCCGGTGAAAAACAGCAGCAACAACAACAACAACAACAACAACAACACAAACGCTCAGAATAATGGGTTTTTCTTTGGAGTGGAAGTTGATGAGTATTTGGATCTTGTGGAGTACAACTCATGTGCTGATCAGAATAATCAGTTCACTGACCATCATCAGCAGCATGACCAGCAGGAGCAACAACAATATGGGGTCCAATACAAGAACTATGGAGGAGATAGTGTTGTGCCAGTTCATCAGCATGGAGAAGTAGGGAAAGCTCACCAGATGCAGCAGCTGCAGAAGCAAAGTTTTCATCAGTTGGGTTTGGAGTATGAGTCCTCAAAAGCTGCATACAGTTACAATGGTTCGCTAAGTCACAGTGTTTCTGTTTCATCCATGGATGTTGGAGTTGTACCGGATTCAACAATGAGCGATATCTCAATTTCGCACCCGAGAACTCCCAAAGGAACTATTGACCTTTTCAGTGGTCCTACCATTCAAATGCCAACCCAACTAAGTCCAATGGACAGGGAGGCCAGGGTCCTAAGGTACAGAGAGAAGAAAAAGACGAGGAAGTTTGAGAAAACAATCCGGTATGCCTCAAGGAAGGCCTACGCCGAGACCAGACCCCGAATCAAGGGCCGGTTTGCAAAGCGAACTGAAATGGAAGTTGAAGTCGACCAGATGTTTGCCACATCGCTGATGGCGGAAAATGGATATGGCATTGTTCCATCATTCTAA

Protein Analysis

402

Amino Acids

44.43

Weight (kDa)

5.41

Isoelectric Point (pI)

38.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013044)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 45
AccI GTMKAC 1 cut(s) 1143
AccII CGCG 5 cut(s) 110, 166, 177, 263, 306
AciI CCGC 9 cut(s) 36, 108, 213, 230, 263, 276, 363, 392, 1172
AclWI GGATC 1 cut(s) 591
AcoI YGGCCR 1 cut(s) 210
AcyI GRCGYC 3 cut(s) 132, 161, 295
AfaI GTAC 6 cut(s) 92, 113, 338, 596, 879, 1016
AfiI CCNNNNNNNGG 5 cut(s) 45, 121, 326, 418, 1102
AgsI TTSAA 4 cut(s) 7, 888, 965, 1139
AjnI CCWGG 2 cut(s) 417, 1001
AluBI AGCT 5 cut(s) 77, 342, 743, 760, 812
AluI AGCT 5 cut(s) 77, 342, 743, 760, 812
Alw21I GWGCWC 1 cut(s) 208
Alw26I GTCTC 2 cut(s) 389, 1079
AlwI GGATC 1 cut(s) 591
AlwNI CAGNNNCTG 1 cut(s) 760
Ama87I CYCGRG 2 cut(s) 121, 916
AoxI GGCC 5 cut(s) 192, 210, 999, 1074, 1105
ArsI GACNNNNNNTTYG 2 cut(s) 1136, 1168
AspLEI GCGC 3 cut(s) 168, 177, 306
AspS9I GGNCC 4 cut(s) 676, 953, 1006, 1105
AsuC2I CCSGG 2 cut(s) 71, 485
AsuHPI GGTGA 3 cut(s) 290, 499, 737
AvaI CYCGRG 2 cut(s) 121, 916
AvaII GGWCC 3 cut(s) 676, 953, 1006
AxyI CCTNAGG 1 cut(s) 1010
BanII GRGCYC 1 cut(s) 52
BauI CACGAG 1 cut(s) 51
Bbv12I GWGCWC 1 cut(s) 208
BccI CCATC 7 cut(s) 320, 329, 361, 398, 642, 1162, 1204
BciT130I CCWGG 2 cut(s) 419, 1003
BclI TGATCA 1 cut(s) 610
BcnI CCSGG 2 cut(s) 71, 485
BcoDI GTCTC 2 cut(s) 389, 1079
BfaI CTAG 1 cut(s) 287
BfmI CTRYAG 1 cut(s) 761
Bme1390I CCNGG 4 cut(s) 71, 419, 485, 1003
Bme18I GGWCC 3 cut(s) 676, 953, 1006
BmeT110I CYCGRG 2 cut(s) 121, 916
BmgT120I GGNCC 4 cut(s) 676, 953, 1006, 1105
BmiI GGNNCC 3 cut(s) 410, 677, 1007
BmrFI CCNGG 4 cut(s) 71, 419, 485, 1003
BmrI ACTGGG 1 cut(s) 55
BmsI GCATC 3 cut(s) 223, 473, 741
BmuI ACTGGG 1 cut(s) 55
BplI GAGNNNNNCTC 2 cut(s) 584, 616
Bpu10I CCTNAGC 1 cut(s) 413
BpuEI CTTGAG 1 cut(s) 1051
BpuMI CCSGG 2 cut(s) 71, 485
BsaAI YACGTR 1 cut(s) 66
BsaHI GRCGYC 3 cut(s) 132, 161, 295
BsaI GGTCTC 1 cut(s) 1079
BsaJI CCNNGG 2 cut(s) 861, 1002
BsaWI WCCGGW 3 cut(s) 326, 880, 1056
BsaXI ACNNNNNCTCC 8 cut(s) 363, 393, 552, 582, 690, 720, 785, 815
Bsc4I CCNNNNNNNGG 5 cut(s) 45, 121, 326, 418, 1102
Bse118I RCCGGY 1 cut(s) 1107
Bse1I ACTGG 2 cut(s) 50, 713
Bse21I CCTNAGG 1 cut(s) 1010
Bse3DI GCAATG 1 cut(s) 28
BseBI CCWGG 2 cut(s) 419, 1003
BseDI CCNNGG 2 cut(s) 861, 1002
BseGI GGATG 7 cut(s) 238, 267, 312, 372, 460, 857, 871
BseLI CCNNNNNNNGG 5 cut(s) 45, 121, 326, 418, 1102
BseMI GCAATG 1 cut(s) 28
BseMII CTCAG 3 cut(s) 359, 404, 551
BseNI ACTGG 2 cut(s) 50, 713
BseRI GAGGAG 1 cut(s) 711
BseX3I CGGCCG 1 cut(s) 210
BseYI CCCAGC 1 cut(s) 386
BsgI GTGCAG 2 cut(s) 120, 232
Bsh1236I CGCG 5 cut(s) 110, 166, 177, 263, 306
Bsh1285I CGRYCG 1 cut(s) 213
BshFI GGCC 5 cut(s) 194, 212, 1001, 1076, 1107
BsiEI CGRYCG 1 cut(s) 213
BsiHKAI GWGCWC 1 cut(s) 208
BsiHKCI CYCGRG 2 cut(s) 121, 916
BsiSI CCGG 7 cut(s) 70, 209, 327, 485, 881, 1057, 1108
BslFI GGGAC 1 cut(s) 293
BslI CCNNNNNNNGG 5 cut(s) 45, 121, 326, 418, 1102
BsmAI GTCTC 2 cut(s) 389, 1079
BsmFI GGGAC 1 cut(s) 293
BsnI GGCC 5 cut(s) 194, 212, 1001, 1076, 1107
Bso31I GGTCTC 1 cut(s) 1079
BsoBI CYCGRG 2 cut(s) 121, 916
Bsp1286I GDGCHC 2 cut(s) 52, 208
Bsp1407I TGTACA 1 cut(s) 336
Bsp143I GATC 3 cut(s) 13, 583, 610
Bsp19I CCATGG 1 cut(s) 861
BspACI CCGC 9 cut(s) 36, 108, 213, 230, 263, 276, 363, 392, 1172
BspANI GGCC 5 cut(s) 194, 212, 1001, 1076, 1107
BspCNI CTCAG 3 cut(s) 358, 405, 550
BspFNI CGCG 5 cut(s) 110, 166, 177, 263, 306
BspLI GGNNCC 3 cut(s) 410, 677, 1007
BspMAI CTGCAG 1 cut(s) 765
BspPI GGATC 1 cut(s) 591
BspTNI GGTCTC 1 cut(s) 1079
BsrDI GCAATG 1 cut(s) 28
BsrFI RCCGGY 1 cut(s) 1107
BsrGI TGTACA 1 cut(s) 336
BsrI ACTGG 2 cut(s) 50, 713
BssAI RCCGGY 1 cut(s) 1107
BssECI CCNNGG 2 cut(s) 861, 1002
BssMI GATC 3 cut(s) 13, 583, 610
BssNI GRCGYC 3 cut(s) 132, 161, 295
BssSI CACGAG 1 cut(s) 51
BssT1I CCWWGG 1 cut(s) 861
Bst2BI CACGAG 1 cut(s) 51
Bst2UI CCWGG 2 cut(s) 419, 1003
Bst4CI ACNGT 4 cut(s) 88, 95, 821, 845
BstACI GRCGYC 3 cut(s) 132, 161, 295
BstAPI GCANNNNNTGC 2 cut(s) 255, 760
BstAUI TGTACA 1 cut(s) 336
BstBAI YACGTR 1 cut(s) 66
BstC8I GCNNGC 5 cut(s) 82, 196, 200, 204, 256
BstDEI CTNAG 6 cut(s) 345, 413, 537, 836, 980, 1010
BstDSI CCRYGG 1 cut(s) 861
BstENI CCTNNNNNAGG 1 cut(s) 416
BstF5I GGATG 7 cut(s) 238, 267, 312, 372, 460, 857, 871
BstFNI CGCG 5 cut(s) 110, 166, 177, 263, 306
BstHHI GCGC 3 cut(s) 168, 177, 306
BstKTI GATC 3 cut(s) 16, 586, 613
BstMAI GTCTC 2 cut(s) 389, 1079
BstMBI GATC 3 cut(s) 13, 583, 610
BstMCI CGRYCG 1 cut(s) 213
BstNI CCWGG 2 cut(s) 419, 1003
BstNSI RCATGY 1 cut(s) 84
BstSCI CCNGG 4 cut(s) 69, 417, 483, 1001
BstSFI CTRYAG 1 cut(s) 761
BstUI CGCG 5 cut(s) 110, 166, 177, 263, 306
BstX2I RGATCY 1 cut(s) 583
BstXI CCANNNNNNTGG 1 cut(s) 157
BstYI RGATCY 1 cut(s) 583
BstZI CGGCCG 1 cut(s) 210
Bsu36I CCTNAGG 1 cut(s) 1010
BsuRI GGCC 5 cut(s) 194, 212, 1001, 1076, 1107
BtgI CCRYGG 1 cut(s) 861
BtgZI GCGATG 1 cut(s) 1146
BtsCI GGATG 7 cut(s) 238, 267, 312, 372, 460, 857, 871
BtsI GCAGTG 2 cut(s) 27, 249
BtsIMutI CAGTG 5 cut(s) 27, 249, 627, 850, 955
Cac8I GCNNGC 5 cut(s) 82, 196, 200, 204, 256
CaiI CAGNNNCTG 1 cut(s) 760
CfoI GCGC 3 cut(s) 168, 177, 306
Cfr10I RCCGGY 1 cut(s) 1107
Cfr13I GGNCC 4 cut(s) 676, 953, 1006, 1105
CseI GACGC 6 cut(s) 140, 150, 228, 269, 284, 295
Csp6I GTAC 6 cut(s) 91, 112, 337, 595, 878, 1015
CviAII CATG 7 cut(s) 81, 143, 170, 603, 647, 725, 862
CviQI GTAC 6 cut(s) 91, 112, 337, 595, 878, 1015
DdeI CTNAG 6 cut(s) 345, 413, 537, 836, 980, 1010
DpnI GATC 3 cut(s) 15, 585, 612
DpnII GATC 3 cut(s) 13, 583, 610
EaeI YGGCCR 1 cut(s) 210
EagI CGGCCG 1 cut(s) 210
EciI GGCGGA 3 cut(s) 265, 407, 1187
EclXI CGGCCG 1 cut(s) 210
Eco130I CCWWGG 1 cut(s) 861
Eco147I AGGCCT 2 cut(s) 194, 1076
Eco24I GRGCYC 1 cut(s) 52
Eco31I GGTCTC 1 cut(s) 1079
Eco32I GATATC 1 cut(s) 901
Eco47I GGWCC 3 cut(s) 676, 953, 1006
Eco52I CGGCCG 1 cut(s) 210
Eco81I CCTNAGG 1 cut(s) 1010
Eco88I CYCGRG 2 cut(s) 121, 916
EcoNI CCTNNNNNAGG 1 cut(s) 416
EcoO109I RGGNCCY 1 cut(s) 1006
EcoRII CCWGG 2 cut(s) 417, 1001
EcoRV GATATC 1 cut(s) 901
EcoT14I CCWWGG 1 cut(s) 861
EcoT38I GRGCYC 1 cut(s) 52
ErhI CCWWGG 1 cut(s) 861
FaeI CATG 7 cut(s) 84, 146, 173, 606, 650, 728, 865
FaqI GGGAC 1 cut(s) 293
FatI CATG 7 cut(s) 80, 142, 169, 602, 646, 724, 861
FauI CCCGC 1 cut(s) 356
FbaI TGATCA 1 cut(s) 610
FblI GTMKAC 1 cut(s) 1143
FokI GGATG 7 cut(s) 245, 254, 299, 379, 467, 844, 878
FriOI GRGCYC 1 cut(s) 52
FspBI CTAG 1 cut(s) 287
GlaI GCGC 3 cut(s) 167, 176, 305
GsaI CCCAGC 1 cut(s) 390
HaeIII GGCC 5 cut(s) 194, 212, 1001, 1076, 1107
HapII CCGG 7 cut(s) 70, 209, 327, 485, 881, 1057, 1108
HgaI GACGC 6 cut(s) 140, 150, 228, 269, 284, 295
HhaI GCGC 3 cut(s) 168, 177, 306
Hin1I GRCGYC 3 cut(s) 132, 161, 295
Hin1II CATG 7 cut(s) 84, 146, 173, 606, 650, 728, 865
Hin6I GCGC 3 cut(s) 166, 175, 304
HinP1I GCGC 3 cut(s) 166, 175, 304
HincII GTYRAC 1 cut(s) 1144
HindII GTYRAC 1 cut(s) 1144
HinfI GANTC 4 cut(s) 104, 800, 884, 1098
HpaII CCGG 7 cut(s) 70, 209, 327, 485, 881, 1057, 1108
HphI GGTGA 3 cut(s) 290, 499, 737
Hpy166II GTNNAC 3 cut(s) 91, 627, 1144
Hpy188I TCNGA 3 cut(s) 18, 540, 615
Hpy188III TCNNGA 1 cut(s) 412
Hpy8I GTNNAC 3 cut(s) 91, 627, 1144
Hpy99I CGWCG 4 cut(s) 134, 166, 244, 263
HpyAV CCTTC 2 cut(s) 416, 1066
HpyCH4III ACNGT 4 cut(s) 88, 95, 821, 845
HpyCH4IV ACGT 1 cut(s) 65
HpyF3I CTNAG 6 cut(s) 345, 413, 537, 836, 980, 1010
HpySE526I ACGT 1 cut(s) 65
Hsp92I GRCGYC 3 cut(s) 132, 161, 295
Hsp92II CATG 7 cut(s) 84, 146, 173, 606, 650, 728, 865
HspAI GCGC 3 cut(s) 166, 175, 304
Ksp22I TGATCA 1 cut(s) 610
Kzo9I GATC 3 cut(s) 13, 583, 610
LmnI GCTCC 2 cut(s) 211, 658
LweI GCATC 3 cut(s) 223, 473, 741
MaeI CTAG 1 cut(s) 287
MaeII ACGT 1 cut(s) 65
MaeIII GTNAC 3 cut(s) 296, 821, 839
MalI GATC 3 cut(s) 15, 585, 612
MboI GATC 3 cut(s) 13, 583, 610
MboII GAAGA 4 cut(s) 23, 413, 458, 1036
MflI RGATCY 1 cut(s) 583
MhlI GDGCHC 2 cut(s) 52, 208
MluCI AATT 1 cut(s) 906
MlyI GAGTC 2 cut(s) 98, 809
MmeI TCCRAC 1 cut(s) 850
MslI CAYNNNNRTG 2 cut(s) 723, 965
MspA1I CMGCKG 2 cut(s) 77, 760
MspI CCGG 7 cut(s) 70, 209, 327, 485, 881, 1057, 1108
MspR9I CCNGG 4 cut(s) 71, 419, 485, 1003
MvaI CCWGG 2 cut(s) 419, 1003
MvnI CGCG 5 cut(s) 110, 166, 177, 263, 306
NciI CCSGG 2 cut(s) 71, 485
NcoI CCATGG 1 cut(s) 861
NdeII GATC 3 cut(s) 13, 583, 610
NlaIII CATG 7 cut(s) 84, 146, 173, 606, 650, 728, 865
NlaIV GGNNCC 3 cut(s) 410, 677, 1007
NmeAIII GCCGAG 1 cut(s) 1108
NmuCI GTSAC 2 cut(s) 296, 839
NspI RCATGY 1 cut(s) 84
PaeI GCATGC 1 cut(s) 84
PceI AGGCCT 2 cut(s) 194, 1076
PfeI GAWTC 2 cut(s) 884, 1098
PflMI CCANNNNNTGG 1 cut(s) 45
PleI GAGTC 2 cut(s) 98, 808
PpsI GAGTC 2 cut(s) 98, 808
Ppu21I YACGTR 1 cut(s) 66
PpuMI RGGWCCY 1 cut(s) 1006
Psp5II RGGWCCY 1 cut(s) 1006
Psp6I CCWGG 2 cut(s) 417, 1001
PspFI CCCAGC 1 cut(s) 386
PspGI CCWGG 2 cut(s) 417, 1001
PspN4I GGNNCC 3 cut(s) 410, 677, 1007
PspPI GGNCC 4 cut(s) 676, 953, 1006, 1105
PspPPI RGGWCCY 1 cut(s) 1006
PstI CTGCAG 1 cut(s) 765
PstNI CAGNNNCTG 1 cut(s) 760
PsuI RGATCY 1 cut(s) 583
PvuII CAGCTG 2 cut(s) 77, 760
RsaI GTAC 6 cut(s) 92, 113, 338, 596, 879, 1016
RsaNI GTAC 6 cut(s) 91, 112, 337, 595, 878, 1015
RseI CAYNNNNRTG 2 cut(s) 723, 965
SalI GTCGAC 1 cut(s) 1142
Sau3AI GATC 3 cut(s) 13, 583, 610
Sau96I GGNCC 4 cut(s) 676, 953, 1006, 1105
SchI GAGTC 2 cut(s) 98, 809
ScrFI CCNGG 4 cut(s) 71, 419, 485, 1003
SduI GDGCHC 2 cut(s) 52, 208
SetI ASST 9 cut(s) 68, 79, 117, 344, 745, 762, 814, 945, 1016
SfaNI GCATC 3 cut(s) 223, 473, 741
SfcI CTRYAG 1 cut(s) 761
SinI GGWCC 3 cut(s) 676, 953, 1006
SmiMI CAYNNNNRTG 2 cut(s) 723, 965
SmlI CTYRAG 1 cut(s) 1066
SmoI CTYRAG 1 cut(s) 1066
SphI GCATGC 1 cut(s) 84
Sse9I AATT 1 cut(s) 906
SseBI AGGCCT 2 cut(s) 194, 1076
SsiI CCGC 9 cut(s) 36, 108, 213, 230, 263, 276, 363, 392, 1172
SspMI CTAG 1 cut(s) 287
StuI AGGCCT 2 cut(s) 194, 1076
StyD4I CCNGG 4 cut(s) 69, 417, 483, 1001
StyI CCWWGG 1 cut(s) 861
TaaI ACNGT 4 cut(s) 88, 95, 821, 845
TaiI ACGT 1 cut(s) 68
TaqI TCGA 1 cut(s) 1143
TasI AATT 1 cut(s) 906
TatI WGTACW 3 cut(s) 90, 336, 594
TauI GCSGC 1 cut(s) 215
TfiI GAWTC 2 cut(s) 884, 1098
TscAI CASTG 5 cut(s) 34, 256, 634, 850, 955
TseFI GTSAC 2 cut(s) 296, 839
Tsp45I GTSAC 2 cut(s) 296, 839
TspDTI ATGAA 4 cut(s) 131, 707, 767, 846
TspRI CASTG 5 cut(s) 34, 256, 634, 850, 955
Van91I CCANNNNNTGG 1 cut(s) 45
VpaK11BI GGWCC 3 cut(s) 676, 953, 1006
XagI CCTNNNNNAGG 1 cut(s) 416
XceI RCATGY 1 cut(s) 84
XcmI CCANNNNNNNNNTGG 1 cut(s) 1165
XmiI GTMKAC 1 cut(s) 1143
XspI CTAG 1 cut(s) 287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.