ZINC FINGER protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G02380 |
| fragaria_vesca | FvH4_6g45860 |
| malus_domestica | MD09G1079200.v1.1 MD17G1069600.v1.1 |
| prunus_persica | Prupe.3G245100_v2.0.a1 |
| pyrus_communis | pycom09g00590 pycom17g06970 |
| rosa_chinensis | RchiOBHm_Chr2g0164091 |
| rosa_laevigata | RLG00000021437 |
| rosa_multiflora | Rmu_sc0038073.1_g000001 Rmu_ssc0000432.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00086770 |
| rosa_rugosa | Rorug02G0506500 |
| rosa_samantha | Rh2AG574800 Rh2BG585300 Rh2CG556200 Rh2DG595000 |
| rosa_wichuraiana | Rw2G047550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 45 |
| AccI | GTMKAC | 1 cut(s) | 1143 |
| AccII | CGCG | 5 cut(s) | 110, 166, 177, 263, 306 |
| AciI | CCGC | 9 cut(s) | 36, 108, 213, 230, 263, 276, 363, 392, 1172 |
| AclWI | GGATC | 1 cut(s) | 591 |
| AcoI | YGGCCR | 1 cut(s) | 210 |
| AcyI | GRCGYC | 3 cut(s) | 132, 161, 295 |
| AfaI | GTAC | 6 cut(s) | 92, 113, 338, 596, 879, 1016 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 45, 121, 326, 418, 1102 |
| AgsI | TTSAA | 4 cut(s) | 7, 888, 965, 1139 |
| AjnI | CCWGG | 2 cut(s) | 417, 1001 |
| AluBI | AGCT | 5 cut(s) | 77, 342, 743, 760, 812 |
| AluI | AGCT | 5 cut(s) | 77, 342, 743, 760, 812 |
| Alw21I | GWGCWC | 1 cut(s) | 208 |
| Alw26I | GTCTC | 2 cut(s) | 389, 1079 |
| AlwI | GGATC | 1 cut(s) | 591 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 760 |
| Ama87I | CYCGRG | 2 cut(s) | 121, 916 |
| AoxI | GGCC | 5 cut(s) | 192, 210, 999, 1074, 1105 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1136, 1168 |
| AspLEI | GCGC | 3 cut(s) | 168, 177, 306 |
| AspS9I | GGNCC | 4 cut(s) | 676, 953, 1006, 1105 |
| AsuC2I | CCSGG | 2 cut(s) | 71, 485 |
| AsuHPI | GGTGA | 3 cut(s) | 290, 499, 737 |
| AvaI | CYCGRG | 2 cut(s) | 121, 916 |
| AvaII | GGWCC | 3 cut(s) | 676, 953, 1006 |
| AxyI | CCTNAGG | 1 cut(s) | 1010 |
| BanII | GRGCYC | 1 cut(s) | 52 |
| BauI | CACGAG | 1 cut(s) | 51 |
| Bbv12I | GWGCWC | 1 cut(s) | 208 |
| BccI | CCATC | 7 cut(s) | 320, 329, 361, 398, 642, 1162, 1204 |
| BciT130I | CCWGG | 2 cut(s) | 419, 1003 |
| BclI | TGATCA | 1 cut(s) | 610 |
| BcnI | CCSGG | 2 cut(s) | 71, 485 |
| BcoDI | GTCTC | 2 cut(s) | 389, 1079 |
| BfaI | CTAG | 1 cut(s) | 287 |
| BfmI | CTRYAG | 1 cut(s) | 761 |
| Bme1390I | CCNGG | 4 cut(s) | 71, 419, 485, 1003 |
| Bme18I | GGWCC | 3 cut(s) | 676, 953, 1006 |
| BmeT110I | CYCGRG | 2 cut(s) | 121, 916 |
| BmgT120I | GGNCC | 4 cut(s) | 676, 953, 1006, 1105 |
| BmiI | GGNNCC | 3 cut(s) | 410, 677, 1007 |
| BmrFI | CCNGG | 4 cut(s) | 71, 419, 485, 1003 |
| BmrI | ACTGGG | 1 cut(s) | 55 |
| BmsI | GCATC | 3 cut(s) | 223, 473, 741 |
| BmuI | ACTGGG | 1 cut(s) | 55 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 584, 616 |
| Bpu10I | CCTNAGC | 1 cut(s) | 413 |
| BpuEI | CTTGAG | 1 cut(s) | 1051 |
| BpuMI | CCSGG | 2 cut(s) | 71, 485 |
| BsaAI | YACGTR | 1 cut(s) | 66 |
| BsaHI | GRCGYC | 3 cut(s) | 132, 161, 295 |
| BsaI | GGTCTC | 1 cut(s) | 1079 |
| BsaJI | CCNNGG | 2 cut(s) | 861, 1002 |
| BsaWI | WCCGGW | 3 cut(s) | 326, 880, 1056 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 363, 393, 552, 582, 690, 720, 785, 815 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 45, 121, 326, 418, 1102 |
| Bse118I | RCCGGY | 1 cut(s) | 1107 |
| Bse1I | ACTGG | 2 cut(s) | 50, 713 |
| Bse21I | CCTNAGG | 1 cut(s) | 1010 |
| Bse3DI | GCAATG | 1 cut(s) | 28 |
| BseBI | CCWGG | 2 cut(s) | 419, 1003 |
| BseDI | CCNNGG | 2 cut(s) | 861, 1002 |
| BseGI | GGATG | 7 cut(s) | 238, 267, 312, 372, 460, 857, 871 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 45, 121, 326, 418, 1102 |
| BseMI | GCAATG | 1 cut(s) | 28 |
| BseMII | CTCAG | 3 cut(s) | 359, 404, 551 |
| BseNI | ACTGG | 2 cut(s) | 50, 713 |
| BseRI | GAGGAG | 1 cut(s) | 711 |
| BseX3I | CGGCCG | 1 cut(s) | 210 |
| BseYI | CCCAGC | 1 cut(s) | 386 |
| BsgI | GTGCAG | 2 cut(s) | 120, 232 |
| Bsh1236I | CGCG | 5 cut(s) | 110, 166, 177, 263, 306 |
| Bsh1285I | CGRYCG | 1 cut(s) | 213 |
| BshFI | GGCC | 5 cut(s) | 194, 212, 1001, 1076, 1107 |
| BsiEI | CGRYCG | 1 cut(s) | 213 |
| BsiHKAI | GWGCWC | 1 cut(s) | 208 |
| BsiHKCI | CYCGRG | 2 cut(s) | 121, 916 |
| BsiSI | CCGG | 7 cut(s) | 70, 209, 327, 485, 881, 1057, 1108 |
| BslFI | GGGAC | 1 cut(s) | 293 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 45, 121, 326, 418, 1102 |
| BsmAI | GTCTC | 2 cut(s) | 389, 1079 |
| BsmFI | GGGAC | 1 cut(s) | 293 |
| BsnI | GGCC | 5 cut(s) | 194, 212, 1001, 1076, 1107 |
| Bso31I | GGTCTC | 1 cut(s) | 1079 |
| BsoBI | CYCGRG | 2 cut(s) | 121, 916 |
| Bsp1286I | GDGCHC | 2 cut(s) | 52, 208 |
| Bsp1407I | TGTACA | 1 cut(s) | 336 |
| Bsp143I | GATC | 3 cut(s) | 13, 583, 610 |
| Bsp19I | CCATGG | 1 cut(s) | 861 |
| BspACI | CCGC | 9 cut(s) | 36, 108, 213, 230, 263, 276, 363, 392, 1172 |
| BspANI | GGCC | 5 cut(s) | 194, 212, 1001, 1076, 1107 |
| BspCNI | CTCAG | 3 cut(s) | 358, 405, 550 |
| BspFNI | CGCG | 5 cut(s) | 110, 166, 177, 263, 306 |
| BspLI | GGNNCC | 3 cut(s) | 410, 677, 1007 |
| BspMAI | CTGCAG | 1 cut(s) | 765 |
| BspPI | GGATC | 1 cut(s) | 591 |
| BspTNI | GGTCTC | 1 cut(s) | 1079 |
| BsrDI | GCAATG | 1 cut(s) | 28 |
| BsrFI | RCCGGY | 1 cut(s) | 1107 |
| BsrGI | TGTACA | 1 cut(s) | 336 |
| BsrI | ACTGG | 2 cut(s) | 50, 713 |
| BssAI | RCCGGY | 1 cut(s) | 1107 |
| BssECI | CCNNGG | 2 cut(s) | 861, 1002 |
| BssMI | GATC | 3 cut(s) | 13, 583, 610 |
| BssNI | GRCGYC | 3 cut(s) | 132, 161, 295 |
| BssSI | CACGAG | 1 cut(s) | 51 |
| BssT1I | CCWWGG | 1 cut(s) | 861 |
| Bst2BI | CACGAG | 1 cut(s) | 51 |
| Bst2UI | CCWGG | 2 cut(s) | 419, 1003 |
| Bst4CI | ACNGT | 4 cut(s) | 88, 95, 821, 845 |
| BstACI | GRCGYC | 3 cut(s) | 132, 161, 295 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 255, 760 |
| BstAUI | TGTACA | 1 cut(s) | 336 |
| BstBAI | YACGTR | 1 cut(s) | 66 |
| BstC8I | GCNNGC | 5 cut(s) | 82, 196, 200, 204, 256 |
| BstDEI | CTNAG | 6 cut(s) | 345, 413, 537, 836, 980, 1010 |
| BstDSI | CCRYGG | 1 cut(s) | 861 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 416 |
| BstF5I | GGATG | 7 cut(s) | 238, 267, 312, 372, 460, 857, 871 |
| BstFNI | CGCG | 5 cut(s) | 110, 166, 177, 263, 306 |
| BstHHI | GCGC | 3 cut(s) | 168, 177, 306 |
| BstKTI | GATC | 3 cut(s) | 16, 586, 613 |
| BstMAI | GTCTC | 2 cut(s) | 389, 1079 |
| BstMBI | GATC | 3 cut(s) | 13, 583, 610 |
| BstMCI | CGRYCG | 1 cut(s) | 213 |
| BstNI | CCWGG | 2 cut(s) | 419, 1003 |
| BstNSI | RCATGY | 1 cut(s) | 84 |
| BstSCI | CCNGG | 4 cut(s) | 69, 417, 483, 1001 |
| BstSFI | CTRYAG | 1 cut(s) | 761 |
| BstUI | CGCG | 5 cut(s) | 110, 166, 177, 263, 306 |
| BstX2I | RGATCY | 1 cut(s) | 583 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 157 |
| BstYI | RGATCY | 1 cut(s) | 583 |
| BstZI | CGGCCG | 1 cut(s) | 210 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1010 |
| BsuRI | GGCC | 5 cut(s) | 194, 212, 1001, 1076, 1107 |
| BtgI | CCRYGG | 1 cut(s) | 861 |
| BtgZI | GCGATG | 1 cut(s) | 1146 |
| BtsCI | GGATG | 7 cut(s) | 238, 267, 312, 372, 460, 857, 871 |
| BtsI | GCAGTG | 2 cut(s) | 27, 249 |
| BtsIMutI | CAGTG | 5 cut(s) | 27, 249, 627, 850, 955 |
| Cac8I | GCNNGC | 5 cut(s) | 82, 196, 200, 204, 256 |
| CaiI | CAGNNNCTG | 1 cut(s) | 760 |
| CfoI | GCGC | 3 cut(s) | 168, 177, 306 |
| Cfr10I | RCCGGY | 1 cut(s) | 1107 |
| Cfr13I | GGNCC | 4 cut(s) | 676, 953, 1006, 1105 |
| CseI | GACGC | 6 cut(s) | 140, 150, 228, 269, 284, 295 |
| Csp6I | GTAC | 6 cut(s) | 91, 112, 337, 595, 878, 1015 |
| CviAII | CATG | 7 cut(s) | 81, 143, 170, 603, 647, 725, 862 |
| CviQI | GTAC | 6 cut(s) | 91, 112, 337, 595, 878, 1015 |
| DdeI | CTNAG | 6 cut(s) | 345, 413, 537, 836, 980, 1010 |
| DpnI | GATC | 3 cut(s) | 15, 585, 612 |
| DpnII | GATC | 3 cut(s) | 13, 583, 610 |
| EaeI | YGGCCR | 1 cut(s) | 210 |
| EagI | CGGCCG | 1 cut(s) | 210 |
| EciI | GGCGGA | 3 cut(s) | 265, 407, 1187 |
| EclXI | CGGCCG | 1 cut(s) | 210 |
| Eco130I | CCWWGG | 1 cut(s) | 861 |
| Eco147I | AGGCCT | 2 cut(s) | 194, 1076 |
| Eco24I | GRGCYC | 1 cut(s) | 52 |
| Eco31I | GGTCTC | 1 cut(s) | 1079 |
| Eco32I | GATATC | 1 cut(s) | 901 |
| Eco47I | GGWCC | 3 cut(s) | 676, 953, 1006 |
| Eco52I | CGGCCG | 1 cut(s) | 210 |
| Eco81I | CCTNAGG | 1 cut(s) | 1010 |
| Eco88I | CYCGRG | 2 cut(s) | 121, 916 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 416 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1006 |
| EcoRII | CCWGG | 2 cut(s) | 417, 1001 |
| EcoRV | GATATC | 1 cut(s) | 901 |
| EcoT14I | CCWWGG | 1 cut(s) | 861 |
| EcoT38I | GRGCYC | 1 cut(s) | 52 |
| ErhI | CCWWGG | 1 cut(s) | 861 |
| FaeI | CATG | 7 cut(s) | 84, 146, 173, 606, 650, 728, 865 |
| FaqI | GGGAC | 1 cut(s) | 293 |
| FatI | CATG | 7 cut(s) | 80, 142, 169, 602, 646, 724, 861 |
| FauI | CCCGC | 1 cut(s) | 356 |
| FbaI | TGATCA | 1 cut(s) | 610 |
| FblI | GTMKAC | 1 cut(s) | 1143 |
| FokI | GGATG | 7 cut(s) | 245, 254, 299, 379, 467, 844, 878 |
| FriOI | GRGCYC | 1 cut(s) | 52 |
| FspBI | CTAG | 1 cut(s) | 287 |
| GlaI | GCGC | 3 cut(s) | 167, 176, 305 |
| GsaI | CCCAGC | 1 cut(s) | 390 |
| HaeIII | GGCC | 5 cut(s) | 194, 212, 1001, 1076, 1107 |
| HapII | CCGG | 7 cut(s) | 70, 209, 327, 485, 881, 1057, 1108 |
| HgaI | GACGC | 6 cut(s) | 140, 150, 228, 269, 284, 295 |
| HhaI | GCGC | 3 cut(s) | 168, 177, 306 |
| Hin1I | GRCGYC | 3 cut(s) | 132, 161, 295 |
| Hin1II | CATG | 7 cut(s) | 84, 146, 173, 606, 650, 728, 865 |
| Hin6I | GCGC | 3 cut(s) | 166, 175, 304 |
| HinP1I | GCGC | 3 cut(s) | 166, 175, 304 |
| HincII | GTYRAC | 1 cut(s) | 1144 |
| HindII | GTYRAC | 1 cut(s) | 1144 |
| HinfI | GANTC | 4 cut(s) | 104, 800, 884, 1098 |
| HpaII | CCGG | 7 cut(s) | 70, 209, 327, 485, 881, 1057, 1108 |
| HphI | GGTGA | 3 cut(s) | 290, 499, 737 |
| Hpy166II | GTNNAC | 3 cut(s) | 91, 627, 1144 |
| Hpy188I | TCNGA | 3 cut(s) | 18, 540, 615 |
| Hpy188III | TCNNGA | 1 cut(s) | 412 |
| Hpy8I | GTNNAC | 3 cut(s) | 91, 627, 1144 |
| Hpy99I | CGWCG | 4 cut(s) | 134, 166, 244, 263 |
| HpyAV | CCTTC | 2 cut(s) | 416, 1066 |
| HpyCH4III | ACNGT | 4 cut(s) | 88, 95, 821, 845 |
| HpyCH4IV | ACGT | 1 cut(s) | 65 |
| HpyF3I | CTNAG | 6 cut(s) | 345, 413, 537, 836, 980, 1010 |
| HpySE526I | ACGT | 1 cut(s) | 65 |
| Hsp92I | GRCGYC | 3 cut(s) | 132, 161, 295 |
| Hsp92II | CATG | 7 cut(s) | 84, 146, 173, 606, 650, 728, 865 |
| HspAI | GCGC | 3 cut(s) | 166, 175, 304 |
| Ksp22I | TGATCA | 1 cut(s) | 610 |
| Kzo9I | GATC | 3 cut(s) | 13, 583, 610 |
| LmnI | GCTCC | 2 cut(s) | 211, 658 |
| LweI | GCATC | 3 cut(s) | 223, 473, 741 |
| MaeI | CTAG | 1 cut(s) | 287 |
| MaeII | ACGT | 1 cut(s) | 65 |
| MaeIII | GTNAC | 3 cut(s) | 296, 821, 839 |
| MalI | GATC | 3 cut(s) | 15, 585, 612 |
| MboI | GATC | 3 cut(s) | 13, 583, 610 |
| MboII | GAAGA | 4 cut(s) | 23, 413, 458, 1036 |
| MflI | RGATCY | 1 cut(s) | 583 |
| MhlI | GDGCHC | 2 cut(s) | 52, 208 |
| MluCI | AATT | 1 cut(s) | 906 |
| MlyI | GAGTC | 2 cut(s) | 98, 809 |
| MmeI | TCCRAC | 1 cut(s) | 850 |
| MslI | CAYNNNNRTG | 2 cut(s) | 723, 965 |
| MspA1I | CMGCKG | 2 cut(s) | 77, 760 |
| MspI | CCGG | 7 cut(s) | 70, 209, 327, 485, 881, 1057, 1108 |
| MspR9I | CCNGG | 4 cut(s) | 71, 419, 485, 1003 |
| MvaI | CCWGG | 2 cut(s) | 419, 1003 |
| MvnI | CGCG | 5 cut(s) | 110, 166, 177, 263, 306 |
| NciI | CCSGG | 2 cut(s) | 71, 485 |
| NcoI | CCATGG | 1 cut(s) | 861 |
| NdeII | GATC | 3 cut(s) | 13, 583, 610 |
| NlaIII | CATG | 7 cut(s) | 84, 146, 173, 606, 650, 728, 865 |
| NlaIV | GGNNCC | 3 cut(s) | 410, 677, 1007 |
| NmeAIII | GCCGAG | 1 cut(s) | 1108 |
| NmuCI | GTSAC | 2 cut(s) | 296, 839 |
| NspI | RCATGY | 1 cut(s) | 84 |
| PaeI | GCATGC | 1 cut(s) | 84 |
| PceI | AGGCCT | 2 cut(s) | 194, 1076 |
| PfeI | GAWTC | 2 cut(s) | 884, 1098 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 45 |
| PleI | GAGTC | 2 cut(s) | 98, 808 |
| PpsI | GAGTC | 2 cut(s) | 98, 808 |
| Ppu21I | YACGTR | 1 cut(s) | 66 |
| PpuMI | RGGWCCY | 1 cut(s) | 1006 |
| Psp5II | RGGWCCY | 1 cut(s) | 1006 |
| Psp6I | CCWGG | 2 cut(s) | 417, 1001 |
| PspFI | CCCAGC | 1 cut(s) | 386 |
| PspGI | CCWGG | 2 cut(s) | 417, 1001 |
| PspN4I | GGNNCC | 3 cut(s) | 410, 677, 1007 |
| PspPI | GGNCC | 4 cut(s) | 676, 953, 1006, 1105 |
| PspPPI | RGGWCCY | 1 cut(s) | 1006 |
| PstI | CTGCAG | 1 cut(s) | 765 |
| PstNI | CAGNNNCTG | 1 cut(s) | 760 |
| PsuI | RGATCY | 1 cut(s) | 583 |
| PvuII | CAGCTG | 2 cut(s) | 77, 760 |
| RsaI | GTAC | 6 cut(s) | 92, 113, 338, 596, 879, 1016 |
| RsaNI | GTAC | 6 cut(s) | 91, 112, 337, 595, 878, 1015 |
| RseI | CAYNNNNRTG | 2 cut(s) | 723, 965 |
| SalI | GTCGAC | 1 cut(s) | 1142 |
| Sau3AI | GATC | 3 cut(s) | 13, 583, 610 |
| Sau96I | GGNCC | 4 cut(s) | 676, 953, 1006, 1105 |
| SchI | GAGTC | 2 cut(s) | 98, 809 |
| ScrFI | CCNGG | 4 cut(s) | 71, 419, 485, 1003 |
| SduI | GDGCHC | 2 cut(s) | 52, 208 |
| SetI | ASST | 9 cut(s) | 68, 79, 117, 344, 745, 762, 814, 945, 1016 |
| SfaNI | GCATC | 3 cut(s) | 223, 473, 741 |
| SfcI | CTRYAG | 1 cut(s) | 761 |
| SinI | GGWCC | 3 cut(s) | 676, 953, 1006 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 723, 965 |
| SmlI | CTYRAG | 1 cut(s) | 1066 |
| SmoI | CTYRAG | 1 cut(s) | 1066 |
| SphI | GCATGC | 1 cut(s) | 84 |
| Sse9I | AATT | 1 cut(s) | 906 |
| SseBI | AGGCCT | 2 cut(s) | 194, 1076 |
| SsiI | CCGC | 9 cut(s) | 36, 108, 213, 230, 263, 276, 363, 392, 1172 |
| SspMI | CTAG | 1 cut(s) | 287 |
| StuI | AGGCCT | 2 cut(s) | 194, 1076 |
| StyD4I | CCNGG | 4 cut(s) | 69, 417, 483, 1001 |
| StyI | CCWWGG | 1 cut(s) | 861 |
| TaaI | ACNGT | 4 cut(s) | 88, 95, 821, 845 |
| TaiI | ACGT | 1 cut(s) | 68 |
| TaqI | TCGA | 1 cut(s) | 1143 |
| TasI | AATT | 1 cut(s) | 906 |
| TatI | WGTACW | 3 cut(s) | 90, 336, 594 |
| TauI | GCSGC | 1 cut(s) | 215 |
| TfiI | GAWTC | 2 cut(s) | 884, 1098 |
| TscAI | CASTG | 5 cut(s) | 34, 256, 634, 850, 955 |
| TseFI | GTSAC | 2 cut(s) | 296, 839 |
| Tsp45I | GTSAC | 2 cut(s) | 296, 839 |
| TspDTI | ATGAA | 4 cut(s) | 131, 707, 767, 846 |
| TspRI | CASTG | 5 cut(s) | 34, 256, 634, 850, 955 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 45 |
| VpaK11BI | GGWCC | 3 cut(s) | 676, 953, 1006 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 416 |
| XceI | RCATGY | 1 cut(s) | 84 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1165 |
| XmiI | GTMKAC | 1 cut(s) | 1143 |
| XspI | CTAG | 1 cut(s) | 287 |