DNA repair protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G28030 AT3G28030 AT3G28030 AT3G28030 |
| fragaria_vesca | FvH4_6g50430 FvH4_6g50430 FvH4_6g50430 FvH4_6g50430 FvH4_6g50430 FvH4_6g50430 FvH4_6g50430 FvH4_6g50430 FvH4_6g50430 FvH4_6g50430 FvH4_6g50430 FvH4_6g50430 FvH4_6g50430 FvH4_6g50430 |
| malus_domestica | MD17G1038000.v1.1 |
| prunus_persica | Prupe.3G281300_v2.0.a1 Prupe.3G281300_v2.0.a1 Prupe.3G281300_v2.0.a1 Prupe.3G281300_v2.0.a1 Prupe.3G281300_v2.0.a1 |
| pyrus_communis | pycom17g03420 |
| rosa_chinensis | RchiOBHm_Chr2g0170851 |
| rosa_laevigata | RLG00000021986 |
| rosa_multiflora | Rmu_co8355801.1_g000001 Rmu_sc0009938.1_g000007 Rmu_sc0032006.1_g000001 Rmu_sc0035429.1_g000001 Rmu_sc0042424.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00081030 |
| rosa_rugosa | Rorug02G0551800 |
| rosa_samantha | Rh2AG624500 Rh2BG635100 Rh2CG603900 Rh2DG646700 |
| rosa_wichuraiana | Rw2G051730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 4274 |
| Acc36I | ACCTGC | 2 cut(s) | 210, 4266 |
| Acc65I | GGTACC | 1 cut(s) | 3686 |
| AccB1I | GGYRCC | 3 cut(s) | 1981, 3686, 4823 |
| AccI | GTMKAC | 3 cut(s) | 427, 1376, 2968 |
| AccII | CGCG | 5 cut(s) | 48, 158, 893, 1164, 3741 |
| AccIII | TCCGGA | 1 cut(s) | 4262 |
| AcoI | YGGCCR | 3 cut(s) | 40, 315, 2857 |
| AcsI | RAATTY | 9 cut(s) | 183, 575, 1354, 1588, 2240, 2410, 3293, 3795, 3988 |
| AcuI | CTGAAG | 8 cut(s) | 3237, 3743, 3834, 4059, 4200, 4668, 4764, 4788 |
| AcyI | GRCGYC | 1 cut(s) | 6 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 2673, 3333, 3627, 4243, 4487, 4663, 4841, 4985 |
| AflII | CTTAAG | 2 cut(s) | 341, 4658 |
| AflIII | ACRYGT | 3 cut(s) | 891, 2809, 3771 |
| AjnI | CCWGG | 5 cut(s) | 498, 1105, 1358, 3922, 4403 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1722, 1754 |
| AleI | CACNNNNGTG | 2 cut(s) | 1691, 4040 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 132, 164, 281, 313 |
| Alw21I | GWGCWC | 2 cut(s) | 2769, 3468 |
| Alw26I | GTCTC | 9 cut(s) | 811, 1433, 1599, 3119, 3433, 3737, 4241, 4482, 4610 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 4736 |
| Aor13HI | TCCGGA | 1 cut(s) | 4262 |
| ApeKI | GCWGC | 9 cut(s) | 524, 848, 1007, 1187, 1190, 2663, 3869, 4733, 4736 |
| ApoI | RAATTY | 9 cut(s) | 183, 575, 1354, 1588, 2240, 2410, 3293, 3795, 3988 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 3436, 3468, 3932, 3964 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2202, 4395 |
| Asp718I | GGTACC | 1 cut(s) | 3686 |
| AspLEI | GCGC | 5 cut(s) | 160, 255, 2986, 3082, 4275 |
| AspS9I | GGNCC | 9 cut(s) | 31, 207, 1459, 2467, 4032, 4234, 4260, 4430, 4489 |
| AsuC2I | CCSGG | 1 cut(s) | 3299 |
| AsuII | TTCGAA | 1 cut(s) | 4928 |
| AvaII | GGWCC | 6 cut(s) | 207, 2467, 4032, 4234, 4260, 4430 |
| AxyI | CCTNAGG | 2 cut(s) | 3273, 5015 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1067, 1100 |
| BamHI | GGATCC | 2 cut(s) | 1102, 1494 |
| BanI | GGYRCC | 3 cut(s) | 1981, 3686, 4823 |
| BanII | GRGCYC | 1 cut(s) | 3621 |
| BarI | GAAGNNNNNNTAC | 8 cut(s) | 615, 647, 948, 980, 3196, 3228, 3895, 3927 |
| BauI | CACGAG | 1 cut(s) | 2073 |
| BbsI | GAAGAC | 5 cut(s) | 82, 283, 1821, 2899, 4656 |
| Bbv12I | GWGCWC | 2 cut(s) | 2769, 3468 |
| BbvCI | CCTCAGC | 2 cut(s) | 369, 4638 |
| BbvI | GCAGC | 9 cut(s) | 536, 835, 994, 1174, 1177, 2650, 3856, 4720, 4723 |
| BceAI | ACGGC | 1 cut(s) | 330 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 247, 281 |
| BciT130I | CCWGG | 5 cut(s) | 500, 1107, 1360, 3924, 4405 |
| BclI | TGATCA | 2 cut(s) | 1711, 2602 |
| BcnI | CCSGG | 1 cut(s) | 3299 |
| BcoDI | GTCTC | 9 cut(s) | 811, 1433, 1599, 3119, 3433, 3737, 4241, 4482, 4610 |
| BfaI | CTAG | 6 cut(s) | 65, 1584, 3332, 3885, 4200, 4349 |
| BfmI | CTRYAG | 5 cut(s) | 1797, 2190, 4728, 4946, 4959 |
| BfoI | RGCGCY | 1 cut(s) | 256 |
| BfrI | CTTAAG | 2 cut(s) | 341, 4658 |
| BfuAI | ACCTGC | 2 cut(s) | 210, 4266 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1238, 2825 |
| BlpI | GCTNAGC | 1 cut(s) | 2625 |
| BmcAI | AGTACT | 2 cut(s) | 1290, 3913 |
| Bme1390I | CCNGG | 6 cut(s) | 500, 1107, 1360, 3299, 3924, 4405 |
| Bme18I | GGWCC | 6 cut(s) | 207, 2467, 4032, 4234, 4260, 4430 |
| BmgT120I | GGNCC | 9 cut(s) | 31, 207, 1459, 2467, 4032, 4234, 4260, 4430, 4489 |
| BmiI | GGNNCC | 9 cut(s) | 33, 238, 1104, 1460, 1496, 1983, 3688, 4261, 4825 |
| BmrFI | CCNGG | 6 cut(s) | 500, 1107, 1360, 3299, 3924, 4405 |
| BmrI | ACTGGG | 3 cut(s) | 289, 1957, 4167 |
| BmuI | ACTGGG | 3 cut(s) | 289, 1957, 4167 |
| BpiI | GAAGAC | 5 cut(s) | 82, 283, 1821, 2899, 4656 |
| BpmI | CTGGAG | 2 cut(s) | 1413, 2358 |
| Bpu10I | CCTNAGC | 4 cut(s) | 369, 738, 3164, 4638 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2625 |
| Bpu14I | TTCGAA | 1 cut(s) | 4928 |
| BpuEI | CTTGAG | 4 cut(s) | 233, 793, 2171, 3858 |
| BpuMI | CCSGG | 1 cut(s) | 3299 |
| Bsa29I | ATCGAT | 2 cut(s) | 87, 1808 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1851 |
| BsaHI | GRCGYC | 1 cut(s) | 6 |
| BsaI | GGTCTC | 2 cut(s) | 811, 4610 |
| BsaJI | CCNNGG | 5 cut(s) | 10, 411, 540, 3923, 4404 |
| BsaWI | WCCGGW | 1 cut(s) | 4262 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 132, 162, 1817, 1847 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 2673, 3333, 3627, 4243, 4487, 4663, 4841, 4985 |
| Bse21I | CCTNAGG | 2 cut(s) | 3273, 5015 |
| Bse3DI | GCAATG | 5 cut(s) | 129, 1010, 2435, 2911, 5010 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1851 |
| BseAI | TCCGGA | 1 cut(s) | 4262 |
| BseBI | CCWGG | 5 cut(s) | 500, 1107, 1360, 3924, 4405 |
| BseCI | ATCGAT | 2 cut(s) | 87, 1808 |
| BseDI | CCNNGG | 5 cut(s) | 10, 411, 540, 3923, 4404 |
| BseJI | GATNNNNATC | 1 cut(s) | 1851 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 2673, 3333, 3627, 4243, 4487, 4663, 4841, 4985 |
| BseMI | GCAATG | 5 cut(s) | 129, 1010, 2435, 2911, 5010 |
| BseRI | GAGGAG | 8 cut(s) | 614, 881, 938, 2232, 2361, 2852, 3290, 3544 |
| BseX3I | CGGCCG | 2 cut(s) | 40, 315 |
| BseXI | GCAGC | 9 cut(s) | 536, 835, 994, 1174, 1177, 2650, 3856, 4720, 4723 |
| BseYI | CCCAGC | 4 cut(s) | 241, 1193, 2659, 2772 |
| BsgI | GTGCAG | 1 cut(s) | 128 |
| Bsh1236I | CGCG | 5 cut(s) | 48, 158, 893, 1164, 3741 |
| Bsh1285I | CGRYCG | 3 cut(s) | 43, 318, 3112 |
| BshNI | GGYRCC | 3 cut(s) | 1981, 3686, 4823 |
| BshVI | ATCGAT | 2 cut(s) | 87, 1808 |
| BsiEI | CGRYCG | 3 cut(s) | 43, 318, 3112 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2769, 3468 |
| BsiSI | CCGG | 4 cut(s) | 69, 3298, 4263, 4770 |
| BslFI | GGGAC | 3 cut(s) | 143, 2789, 4421 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 2673, 3333, 3627, 4243, 4487, 4663, 4841, 4985 |
| BsmAI | GTCTC | 9 cut(s) | 811, 1433, 1599, 3119, 3433, 3737, 4241, 4482, 4610 |
| BsmFI | GGGAC | 3 cut(s) | 143, 2789, 4421 |
| BsmI | GAATGC | 3 cut(s) | 571, 2430, 4468 |
| Bso31I | GGTCTC | 2 cut(s) | 811, 4610 |
| Bsp119I | TTCGAA | 1 cut(s) | 4928 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2769, 3468, 3621 |
| Bsp13I | TCCGGA | 1 cut(s) | 4262 |
| Bsp1407I | TGTACA | 3 cut(s) | 1775, 3090, 4720 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2625 |
| Bsp68I | TCGCGA | 1 cut(s) | 1164 |
| BspDI | ATCGAT | 2 cut(s) | 87, 1808 |
| BspEI | TCCGGA | 1 cut(s) | 4262 |
| BspFNI | CGCG | 5 cut(s) | 48, 158, 893, 1164, 3741 |
| BspHI | TCATGA | 2 cut(s) | 2740, 3135 |
| BspLI | GGNNCC | 9 cut(s) | 33, 238, 1104, 1460, 1496, 1983, 3688, 4261, 4825 |
| BspMAI | CTGCAG | 2 cut(s) | 2194, 4950 |
| BspMI | ACCTGC | 2 cut(s) | 210, 4266 |
| BspT104I | TTCGAA | 1 cut(s) | 4928 |
| BspT107I | GGYRCC | 3 cut(s) | 1981, 3686, 4823 |
| BspTI | CTTAAG | 2 cut(s) | 341, 4658 |
| BspTNI | GGTCTC | 2 cut(s) | 811, 4610 |
| BsrDI | GCAATG | 5 cut(s) | 129, 1010, 2435, 2911, 5010 |
| BsrGI | TGTACA | 3 cut(s) | 1775, 3090, 4720 |
| BssECI | CCNNGG | 5 cut(s) | 10, 411, 540, 3923, 4404 |
| BssNAI | GTATAC | 1 cut(s) | 2969 |
| BssNI | GRCGYC | 1 cut(s) | 6 |
| BssSI | CACGAG | 1 cut(s) | 2073 |
| BssT1I | CCWWGG | 1 cut(s) | 411 |
| Bst1107I | GTATAC | 1 cut(s) | 2969 |
| Bst2BI | CACGAG | 1 cut(s) | 2073 |
| Bst2UI | CCWGG | 5 cut(s) | 500, 1107, 1360, 3924, 4405 |
| Bst6I | CTCTTC | 5 cut(s) | 618, 2109, 4123, 4144, 4374 |
| BstACI | GRCGYC | 1 cut(s) | 6 |
| BstAFI | CTTAAG | 2 cut(s) | 341, 4658 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 566, 857, 1880, 2189, 4877 |
| BstAUI | TGTACA | 3 cut(s) | 1775, 3090, 4720 |
| BstBI | TTCGAA | 1 cut(s) | 4928 |
| BstC8I | GCNNGC | 5 cut(s) | 94, 191, 4071, 4107, 4489 |
| BstDSI | CCRYGG | 1 cut(s) | 10 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 4839 |
| BstFNI | CGCG | 5 cut(s) | 48, 158, 893, 1164, 3741 |
| BstH2I | RGCGCY | 1 cut(s) | 256 |
| BstHHI | GCGC | 5 cut(s) | 160, 255, 2986, 3082, 4275 |
| BstMAI | GTCTC | 9 cut(s) | 811, 1433, 1599, 3119, 3433, 3737, 4241, 4482, 4610 |
| BstMCI | CGRYCG | 3 cut(s) | 43, 318, 3112 |
| BstNI | CCWGG | 5 cut(s) | 500, 1107, 1360, 3924, 4405 |
| BstNSI | RCATGY | 3 cut(s) | 2813, 3775, 4109 |
| BstSCI | CCNGG | 6 cut(s) | 498, 1105, 1358, 3297, 3922, 4403 |
| BstSFI | CTRYAG | 5 cut(s) | 1797, 2190, 4728, 4946, 4959 |
| BstUI | CGCG | 5 cut(s) | 48, 158, 893, 1164, 3741 |
| BstV1I | GCAGC | 9 cut(s) | 536, 835, 994, 1174, 1177, 2650, 3856, 4720, 4723 |
| BstV2I | GAAGAC | 5 cut(s) | 82, 283, 1821, 2899, 4656 |
| BstX2I | RGATCY | 3 cut(s) | 1102, 1494, 3319 |
| BstYI | RGATCY | 3 cut(s) | 1102, 1494, 3319 |
| BstZ17I | GTATAC | 1 cut(s) | 2969 |
| BstZI | CGGCCG | 2 cut(s) | 40, 315 |
| Bsu15I | ATCGAT | 2 cut(s) | 87, 1808 |
| Bsu36I | CCTNAGG | 2 cut(s) | 3273, 5015 |
| BsuTUI | ATCGAT | 2 cut(s) | 87, 1808 |
| BtgI | CCRYGG | 1 cut(s) | 10 |
| BtgZI | GCGATG | 2 cut(s) | 960, 2022 |
| BtsI | GCAGTG | 2 cut(s) | 2929, 4943 |
| BtuMI | TCGCGA | 1 cut(s) | 1164 |
| BveI | ACCTGC | 2 cut(s) | 210, 4266 |
| Cac8I | GCNNGC | 5 cut(s) | 94, 191, 4071, 4107, 4489 |
| CaiI | CAGNNNCTG | 1 cut(s) | 4736 |
| CciI | TCATGA | 2 cut(s) | 2740, 3135 |
| CfoI | GCGC | 5 cut(s) | 160, 255, 2986, 3082, 4275 |
| Cfr13I | GGNCC | 9 cut(s) | 31, 207, 1459, 2467, 4032, 4234, 4260, 4430, 4489 |
| ClaI | ATCGAT | 2 cut(s) | 87, 1808 |
| CseI | GACGC | 1 cut(s) | 882 |
| EaeI | YGGCCR | 3 cut(s) | 40, 315, 2857 |
| EagI | CGGCCG | 2 cut(s) | 40, 315 |
| Eam1104I | CTCTTC | 5 cut(s) | 618, 2109, 4123, 4144, 4374 |
| EarI | CTCTTC | 5 cut(s) | 618, 2109, 4123, 4144, 4374 |
| EciI | GGCGGA | 1 cut(s) | 249 |
| EclXI | CGGCCG | 2 cut(s) | 40, 315 |
| Eco130I | CCWWGG | 1 cut(s) | 411 |
| Eco24I | GRGCYC | 1 cut(s) | 3621 |
| Eco31I | GGTCTC | 2 cut(s) | 811, 4610 |
| Eco32I | GATATC | 1 cut(s) | 3400 |
| Eco47I | GGWCC | 6 cut(s) | 207, 2467, 4032, 4234, 4260, 4430 |
| Eco52I | CGGCCG | 2 cut(s) | 40, 315 |
| Eco57I | CTGAAG | 8 cut(s) | 3237, 3743, 3834, 4059, 4200, 4668, 4764, 4788 |
| Eco81I | CCTNAGG | 2 cut(s) | 3273, 5015 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 4839 |
| EcoO109I | RGGNCCY | 1 cut(s) | 4430 |
| EcoRI | GAATTC | 1 cut(s) | 3795 |
| EcoRII | CCWGG | 5 cut(s) | 498, 1105, 1358, 3922, 4403 |
| EcoRV | GATATC | 1 cut(s) | 3400 |
| EcoT14I | CCWWGG | 1 cut(s) | 411 |
| EcoT22I | ATGCAT | 5 cut(s) | 571, 648, 981, 2185, 3268 |
| EcoT38I | GRGCYC | 1 cut(s) | 3621 |
| ErhI | CCWWGG | 1 cut(s) | 411 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 203, 235, 4641, 4673 |
| FaqI | GGGAC | 3 cut(s) | 143, 2789, 4421 |
| FauI | CCCGC | 3 cut(s) | 120, 276, 4480 |
| FauNDI | CATATG | 4 cut(s) | 98, 2472, 4242, 4873 |
| FbaI | TGATCA | 2 cut(s) | 1711, 2602 |
| FblI | GTMKAC | 3 cut(s) | 427, 1376, 2968 |
| FriOI | GRGCYC | 1 cut(s) | 3621 |
| FspBI | CTAG | 6 cut(s) | 65, 1584, 3332, 3885, 4200, 4349 |
| FspI | TGCGCA | 1 cut(s) | 4274 |
| GlaI | GCGC | 5 cut(s) | 159, 254, 2985, 3081, 4274 |
| GsaI | CCCAGC | 4 cut(s) | 245, 1197, 2663, 2776 |
| GsuI | CTGGAG | 2 cut(s) | 1413, 2358 |
| HaeII | RGCGCY | 1 cut(s) | 256 |
| HapII | CCGG | 4 cut(s) | 69, 3298, 4263, 4770 |
| HgaI | GACGC | 1 cut(s) | 882 |
| HhaI | GCGC | 5 cut(s) | 160, 255, 2986, 3082, 4275 |
| Hin1I | GRCGYC | 1 cut(s) | 6 |
| Hin6I | GCGC | 5 cut(s) | 158, 253, 2984, 3080, 4273 |
| HinP1I | GCGC | 5 cut(s) | 158, 253, 2984, 3080, 4273 |
| HincII | GTYRAC | 3 cut(s) | 897, 2682, 4005 |
| HindII | GTYRAC | 3 cut(s) | 897, 2682, 4005 |
| HindIII | AAGCTT | 2 cut(s) | 302, 3762 |
| HpaII | CCGG | 4 cut(s) | 69, 3298, 4263, 4770 |
| Hpy99I | CGWCG | 4 cut(s) | 41, 59, 183, 1164 |
| HpyCH4IV | ACGT | 2 cut(s) | 1975, 3144 |
| HpySE526I | ACGT | 2 cut(s) | 1975, 3144 |
| Hsp92I | GRCGYC | 1 cut(s) | 6 |
| HspAI | GCGC | 5 cut(s) | 158, 253, 2984, 3080, 4273 |
| Kpn2I | TCCGGA | 1 cut(s) | 4262 |
| KpnI | GGTACC | 1 cut(s) | 3690 |
| Ksp22I | TGATCA | 2 cut(s) | 1711, 2602 |
| LmnI | GCTCC | 3 cut(s) | 1394, 2947, 3154 |
| Lsp1109I | GCAGC | 9 cut(s) | 536, 835, 994, 1174, 1177, 2650, 3856, 4720, 4723 |
| MaeI | CTAG | 6 cut(s) | 65, 1584, 3332, 3885, 4200, 4349 |
| MaeII | ACGT | 2 cut(s) | 1975, 3144 |
| MaeIII | GTNAC | 9 cut(s) | 1387, 1885, 1943, 2353, 2443, 3046, 3452, 4496, 4941 |
| MfeI | CAATTG | 1 cut(s) | 2590 |
| MflI | RGATCY | 3 cut(s) | 1102, 1494, 3319 |
| MhlI | GDGCHC | 3 cut(s) | 2769, 3468, 3621 |
| MluI | ACGCGT | 1 cut(s) | 891 |
| MlyI | GAGTC | 7 cut(s) | 72, 1479, 2343, 2746, 3050, 3739, 4391 |
| MmeI | TCCRAC | 1 cut(s) | 4776 |
| Mph1103I | ATGCAT | 5 cut(s) | 571, 648, 981, 2185, 3268 |
| MroI | TCCGGA | 1 cut(s) | 4262 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2202, 4395 |
| MslI | CAYNNNNRTG | 5 cut(s) | 101, 1691, 2232, 4040, 4110 |
| MspA1I | CMGCKG | 8 cut(s) | 283, 587, 665, 998, 2663, 2772, 3479, 4733 |
| MspCI | CTTAAG | 2 cut(s) | 341, 4658 |
| MspI | CCGG | 4 cut(s) | 69, 3298, 4263, 4770 |
| MspR9I | CCNGG | 6 cut(s) | 500, 1107, 1360, 3299, 3924, 4405 |
| MunI | CAATTG | 1 cut(s) | 2590 |
| Mva1269I | GAATGC | 3 cut(s) | 571, 2430, 4468 |
| MvaI | CCWGG | 5 cut(s) | 500, 1107, 1360, 3924, 4405 |
| MvnI | CGCG | 5 cut(s) | 48, 158, 893, 1164, 3741 |
| NciI | CCSGG | 1 cut(s) | 3299 |
| NdeI | CATATG | 4 cut(s) | 98, 2472, 4242, 4873 |
| NlaIV | GGNNCC | 9 cut(s) | 33, 238, 1104, 1460, 1496, 1983, 3688, 4261, 4825 |
| NmeAIII | GCCGAG | 4 cut(s) | 147, 343, 565, 2835 |
| NmuCI | GTSAC | 5 cut(s) | 1387, 1943, 3046, 3452, 4941 |
| NruI | TCGCGA | 1 cut(s) | 1164 |
| NsbI | TGCGCA | 1 cut(s) | 4274 |
| NsiI | ATGCAT | 5 cut(s) | 571, 648, 981, 2185, 3268 |
| NspI | RCATGY | 3 cut(s) | 2813, 3775, 4109 |
| NspV | TTCGAA | 1 cut(s) | 4928 |
| OliI | CACNNNNGTG | 2 cut(s) | 1691, 4040 |
| PaeI | GCATGC | 1 cut(s) | 4109 |
| PagI | TCATGA | 2 cut(s) | 2740, 3135 |
| PciI | ACATGT | 2 cut(s) | 2809, 3771 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 45, 3738 |
| PctI | GAATGC | 3 cut(s) | 571, 2430, 4468 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2202, 4395 |
| PfoI | TCCNGGA | 3 cut(s) | 1105, 1358, 3297 |
| Ple19I | CGATCG | 1 cut(s) | 3112 |
| PleI | GAGTC | 7 cut(s) | 72, 1478, 2342, 2745, 3050, 3739, 4390 |
| PpsI | GAGTC | 7 cut(s) | 72, 1478, 2342, 2745, 3050, 3739, 4390 |
| PpuMI | RGGWCCY | 1 cut(s) | 4430 |
| PscI | ACATGT | 2 cut(s) | 2809, 3771 |
| Psp5II | RGGWCCY | 1 cut(s) | 4430 |
| Psp6I | CCWGG | 5 cut(s) | 498, 1105, 1358, 3922, 4403 |
| PspFI | CCCAGC | 4 cut(s) | 241, 1193, 2659, 2772 |
| PspGI | CCWGG | 5 cut(s) | 498, 1105, 1358, 3922, 4403 |
| PspN4I | GGNNCC | 9 cut(s) | 33, 238, 1104, 1460, 1496, 1983, 3688, 4261, 4825 |
| PspPI | GGNCC | 9 cut(s) | 31, 207, 1459, 2467, 4032, 4234, 4260, 4430, 4489 |
| PspPPI | RGGWCCY | 1 cut(s) | 4430 |
| PstI | CTGCAG | 2 cut(s) | 2194, 4950 |
| PstNI | CAGNNNCTG | 1 cut(s) | 4736 |
| PsuI | RGATCY | 3 cut(s) | 1102, 1494, 3319 |
| PvuI | CGATCG | 1 cut(s) | 3112 |
| PvuII | CAGCTG | 6 cut(s) | 665, 998, 2663, 2772, 3479, 4733 |
| RruI | TCGCGA | 1 cut(s) | 1164 |
| RseI | CAYNNNNRTG | 5 cut(s) | 101, 1691, 2232, 4040, 4110 |
| Sau96I | GGNCC | 9 cut(s) | 31, 207, 1459, 2467, 4032, 4234, 4260, 4430, 4489 |
| ScaI | AGTACT | 2 cut(s) | 1290, 3913 |
| SchI | GAGTC | 7 cut(s) | 72, 1479, 2343, 2746, 3050, 3739, 4391 |
| ScrFI | CCNGG | 6 cut(s) | 500, 1107, 1360, 3299, 3924, 4405 |
| SduI | GDGCHC | 3 cut(s) | 2769, 3468, 3621 |
| SfcI | CTRYAG | 5 cut(s) | 1797, 2190, 4728, 4946, 4959 |
| SfuI | TTCGAA | 1 cut(s) | 4928 |
| SinI | GGWCC | 6 cut(s) | 207, 2467, 4032, 4234, 4260, 4430 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 101, 1691, 2232, 4040, 4110 |
| SmlI | CTYRAG | 6 cut(s) | 248, 341, 808, 2150, 3873, 4658 |
| SmoI | CTYRAG | 6 cut(s) | 248, 341, 808, 2150, 3873, 4658 |
| SphI | GCATGC | 1 cut(s) | 4109 |
| SspMI | CTAG | 6 cut(s) | 65, 1584, 3332, 3885, 4200, 4349 |
| StyD4I | CCNGG | 6 cut(s) | 498, 1105, 1358, 3297, 3922, 4403 |
| StyI | CCWWGG | 1 cut(s) | 411 |
| TaiI | ACGT | 2 cut(s) | 1978, 3147 |
| TaqII | GACCGA | 1 cut(s) | 4719 |
| TatI | WGTACW | 6 cut(s) | 1177, 1288, 1775, 3090, 3911, 4720 |
| TauI | GCSGC | 7 cut(s) | 45, 48, 258, 587, 863, 3757, 5032 |
| TseFI | GTSAC | 5 cut(s) | 1387, 1943, 3046, 3452, 4941 |
| TseI | GCWGC | 9 cut(s) | 524, 848, 1007, 1187, 1190, 2663, 3869, 4733, 4736 |
| Tsp45I | GTSAC | 5 cut(s) | 1387, 1943, 3046, 3452, 4941 |
| TspGWI | ACGGA | 7 cut(s) | 43, 1148, 1240, 1362, 1487, 2439, 4972 |
| Vha464I | CTTAAG | 2 cut(s) | 341, 4658 |
| VpaK11BI | GGWCC | 6 cut(s) | 207, 2467, 4032, 4234, 4260, 4430 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 4839 |
| XapI | RAATTY | 9 cut(s) | 183, 575, 1354, 1588, 2240, 2410, 3293, 3795, 3988 |
| XbaI | TCTAGA | 1 cut(s) | 3884 |
| XceI | RCATGY | 3 cut(s) | 2813, 3775, 4109 |
| XmiI | GTMKAC | 3 cut(s) | 427, 1376, 2968 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2202, 4395 |
| XspI | CTAG | 6 cut(s) | 65, 1584, 3332, 3885, 4200, 4349 |
| ZrmI | AGTACT | 2 cut(s) | 1290, 3913 |
| Zsp2I | ATGCAT | 5 cut(s) | 571, 648, 981, 2185, 3268 |