RLG00000021986

DNA repair protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
79745513 .. 79757573
12061 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021986

Sequence Viewer

Length: 5664 bp
ATGGGCGTCCACGGTCTCTGGGAACTCCTCTCCCCCGTCGGCCGCCGCGTCTCCGTCGAGACCTTAGCCGGAAGAAGACTGGCCATCGACGCGAGCATATGGATGGTTCAGTTCATGAAGGCAATGCGCGACGAGAAGGGAGAGATGGTCCGAAACGCGCATTTGCTCGGCTTCTTTCGCCGGATTTGCAAGCTGCTCTACCTGCGGACCAAGCCGGTGTTTGTTTTCGACGGCGGAACGCCGGCGCTCAAGCGCCGCACTGTGATCGCTCGCCGGAGACAGCGGGAGAATGCGCAGGCTAAGCTCCGGAAAACAGCCGAGAAATTGCTTCTCAATCATCTTAAGTCGGTGAGGCTGAAGGACTTGGCTGAGGATATTAAGAACCAGAGGGAGAATCAAAAGAATGATGCCAAGGAAGTTTCAGATAAAGCTGGTAGTTCGGGGAGTGGTGATTTAGAAATGAATGATTTGGCCTTGAAGCGTTGCAACCAGGAAAAGCTGGATGAAATGTTGGCAGCGTCGATTGTGGCGGAGGAAGAAGGGGGTTTAACAAACAGTTTGCCAAATACTTCTGCTGCTGTTCCTTGTGAGGAGGAAGACAAAGAAGAGGATGAAGAGCTGATACTCCCAGAGATGCATGGCGAAGTTGATCCAGCTGTGTTAGCTGCTTTGCCTCCATCAATGCAACTTGGACTTCTTTTGCAGAAAAAAAAGCAGGCGAATGATGCCAAGGGTAAAAAGATTATGATTGCAGCATCTATTGCGGCAGAGACAGATGCTAGTGTAACTAATAATGCATCAACATCAACTGCTTATGTTCTTGTTGATGAGGATGTCAATGAAGAGGAAGATGATGAAGATGAAGAGATGATACTGCCAGCAATGCATGGTGATGTTGATCCAGCTGTATTAGCAGCATTGCCCCCATCGATGCAACTTGATCTTCTTGTTCAAATTAGAGAGAGATTGATGGCGGAAAACAGACAAAAGTATCAGAAGGTCAAAAAGGACCCTGAAAAGTTCTCCGAGCTACAAATACAATCTTACCTTAAGACTGTTGCTTTCCGTCGCGAGATAGATCATGTGCAGAAAGCTGCTTCTCGAAGGGGGTTTAGTGGTGTCCAGACATCACGGATAGCCTCTGAAAGCCACAGAGAATTTATCTTCTCATCATCATTTACTGGTGATAAACAAGTACTTACCGCTGCAAGAGCTGATAGAAGTGGAGACAAACAACAAGCACCAAAAGAGCATTCTTCAAATGTCAAGAATAGTGTTCCATCTACCAATAATGTGACTAGATCAACCCCTGAAGAATCCCGAAGGGTTTTTGATGACAACATTGAGACATATTTGGATGAGAGGGGCAATGTTAGAGTCAGTAGAGTAAGAGCTATGGGGATCCGCATGACCCGTGATTTACAAAGGAATTTGGATCTGATGAAAGAGATGGAACAAGAGAAAACCAATGCAAACAAGGTAACCAATGCTGGGAATGTGCTCACTAGAAATAACACTGGCAGCATTTTGAGAAGGTCCCCGAGTAATGGAACACTCAAAGAAACATCATGCGGTGATAACAGGGATCTTGATAACACTGCTGTGCCAAAAAGTCTTCCTGGTCAAAACAAGGTTGGGGAATCCTCACTCGGTGATAATAACTTGAATGAGAGAAATCATCAGTGCATTTCAAAACTTGTTACTCCTATAGAGATATCCATTGAAGACGATGGTGATGGAAAGCCTTTTGATGCTGAAGATGATCTATTTGCTCGTTTAGTAGCAGGTAATCCTGTAACTATTTCCTCAGCTAATGATACTGTAAAAGAACAATTTTCTGGTTCTGATTCAGACTGTGACTGGGAGGAGGGGACTGTAAAAAGTAGTAGTGTTCCTGTTGATAGTGAATTGAAAATTAGTTCCCCTGATTTGAAAGCCAACAATAGTGATGACAGTGAAGTGGAATGGGAGGGAGGATTTTCTGGAATTACTGAAAATACCTCATCTTACCCTGGCAGAAAAACAACATCTAAAGGTTATGTTGAAGAAGAAGCTGATTTGCAGGAAGCAATAAAGAGGAGTCTCGAGGATATAGGGGTTGAGAAGGGTAGTCGTGCATCATTGGAAGATGAAAAGTTGAAACCTCTTGGAGAAGAGGTTCAAAAAGCTAGTGGATATATTGATAGAGAAACCAAGATGGTTGACCCAGTTTTGTTTAGTACCCAACTAAATGGATCAGTTGTTGATGGATTTGCAAAGCTGAACGGTGTAAGATACTTAGGCTCTTCTTCAGAACAAGTAATGCAGGATGCAAGTGAAAGGGTCAATTTGTATGGAGAAATGCAATCCACAGTATCTTTTACTCCTTCAGGCACAAAGGAGGTCCATGCGATGAGGGAACAAGTCTTGGGTACTTTAAATGACGGTGGTGGCATATCTACTGTTCCTAATGCGTGTGAAAATATTAATGCTGACAATTCTTATAGTTTGTTTGGTAATGTTACTCGTTGGGTTGATGACCAGAAGAATGATATTGAAACAGAATCGTCATGTCATTTGGTTGAAACGGCAAACCCTTCTTCCATAGTGGAGTCATTGCCAAACAAGATGACAGAAGAATTTGATGATCATAGAAAATGGGATAAGGAAAAGAGTCATGACAGTGTTTCTCAGGAAATTAATCACAATTTGGAAAAATCTCCTGCTAAGGGTATTGGTAATGCAGATATTGAAGTCATGGAAGCCAATTTGGAGGAGGAAATGCTAATTTTAGACCAAGAGTGTATGAATCTGGGAGATGAGCAGAGAAGGCTTGAACGTAATGTAGAATCCGTAAGCAGTGAGATGTTCACTGAATGTCAGGAGCTGTTGCAAATGTTTGGTATACCATACATTATTGCACCGATGGAAGCAGAAGCTCAGTGTGCATATTTGGAACTGGCGAACCTTGTTGATGGTGTTGTGACTGATGACTCTGATGTGTTCTTGTTTGGGGCGCGAAGTGTTTACAAAAATATTTTTGATGATCGAAAATACGTTGAGACATATTTTATGAAGGACATTGAGAGTGAGCTTGGCTTAACGAGAGAGAAGCTAATTCGTATGGCACTTCTTCTTGGGAGTGATTATACTGAAGGGGTTAGTGGGATTGGCATTGTCAATGCTATTGAGGTTGTAAATGCATTTCCTGAGGAGGATGGCCTCCATAAATTTCGGAATTGGATTGAATCACCTGATCCTACCATTCTAGGTAAGTTGGACACAGAGTCTGGATCAAGTGCCAGGAAAAGAGGGTCAAAGTTTGGGAAGAATGATACAAATAATACAAAGAGCCATATGGATGAAGTCTCAGATCTTGAGAAAAGCAATTGTCAAGATCAAGAACACAAGCAGTCAGATGATCCGACTGAGGGTGTGAAGCAAATTTTCATGGAGAAGCATAGAAAAGTGAGCAAAAATTGGCATATTCCCCTATCTTTTCCAAGTGATGCAGTTACTTCTGCTTATACTTGTCCACAAGTGGACAAGTCAAGTGAGCCTTTCATATGGGGAAAGCCAGATCATTTGGTTCTTCGCAAATTGTGCTGGGAAAAGTTTGGTTGGGTTAACCAGAAGTCAGATGAACTGCTAGTCCCTGTTCTGAAAGAGTACAACAAACATGAGACTCAACTGCGGCTGGAAGCTTTTTACACGTTCAATGAAAGATTTGCAAAAATACGTAGCAAGAGAATCAAGAAAGCTGTCAAAGGTATCACTGGAGATCAACCCTCGGAATTGATGAATGCTGCTTCACAAGAAGGTTCTAATAGTAGAAAGAAGAGAAGTGTAAGTACTGATGAAGCTGGGGTTGACAATTCAGATAAATCTTTAGTCGGAACAGAGAAAACCACAGTTAGAAATCAGAGCAATTCTAAGGGGAAATCAACTCGTAAGCAGTCAAGTAAAAGGCAGGCTGCTGAGGGCGGACAAACCAATAGAAAATCAGTTGCAAATGGAAGAGGCAGAGGAAGAGGAAGAGGTACAAGCAGGGTACTGGGAAGAGGAAGGAGAAAAGTAGATTCCAGCTCTCCAGAAACTCAAAACACTTCTAATGATGGTGAAGAAGATGATGAGTTGGAAGTTCATATGGCAACATTTGAAAGCTCAGAGGAAGTGCGCAGGTCTGGGCGGTTGCGGAAGCCTGTGAATTACAGAGTCAATGACATGGAAAATGATGATCTGGATCACACTGATAGCAGAGTTTCCGAAGTAGATGCAGGGAAACAAAGTCTATTCAAGGCCGACGGTATATGTGATGAAATTGTTTTAGGTGTCAATGAAAAGAAACAGGAGAGTGCACGGAAGTTGTCTCCAAAGGAGGGCCAGTGTAAAGATTACCTTGAGTTAGGGGGTGGGTTCTGCCCCTCTGAAGATGAAACTAGTGAACCAGGTTTGAGCAATGTTGATCAACATTTTCAGGGTGATGTTTCTGAAGACGACATTCAAATGGTAGGGGGATTTAGGGGAAATGAAAATGAGTTTGATACTAACCGAGATGGAATTCATGATCTAGCAACAGCTACTACTGTATCGGGAAATGGCGACCTTTCTGATTTCTCTTGTTTCCTCGATGAAGCTGATGTTGGTGATATGTCAGTTCAATCCAATCTTCCCACAAAAAGACCGTTAGTGGGATTACCAGGTAGTGGGAGGACATCTGCCTATGATTCCGAACAGAGCTTAAATCATTATACGAGTAATGATCATTCCATGTCCAGTGTGTCGCCACAGGAGAATACAGTAGATAATTCTAGACAGCCACCTATTGGAGGTATGATAATGATGGAGATCGCGGATGTAGGTGCAGCAACTATAAGCAAAGCAGCCATGTCAAAAGGGATGAGCAGTTATGTTTTAGTTGTTTACTCTAGCGCGCTCGGTACCATCTTTCTCCTTCCTTGTTTCATATTGCAAAAGAAGATTTCTTTTTCTTTTTCACTCCCTAGTGGACAATTCCTTCTTGGCCTTATTGGCTACCTATATATGCTCACCAACACTAGCTTCAGGCCTTCAGCTATAGGGAATCTTATACCAGTCTTTACATTCATGCTGGCAATCATTTTCGGGATTGAAAAGCTAGATTTGAGAAGATCAACCAGTCGAGCTAAAGTGTTATGGACTATAGTATCAGTATCTGGAGCATTTATAGTAATTTTATACAAGGGATCACAAACAAAGTGGATCTTAGGAGGTCTTATGCTTGCTGTGGCTTGCCTTTTGGCGGCAATATGGAACATTCTTCAGAAATCACTTGTTGAGAACTGTCGGTCAATGGTTACCATAGTCTTCTTCTACACCTTATTTATGACAATTCAATGCACAGTGTTCTCTCTGTTTGTGGAAAGCAATCGGAATGCTTGGCTATTAAAGCCTGACATCAAGATGATCTCCATTGTCTTCTCAGCTATATTTGGGAGTGTGTTGCGTATTGGTATTCATACCTGGTGCTTGCACCAAAAGGGGCATATCTTTGTAGCAATGTTTAGGCCTTTGGGAATTGCCATTGCTGAAGTAATGATCAAAGAAAAGAGCACTACTCTTGCGGAGAGTAATGCCCAAAGCTTGGCATCATCCACCCAAAAGACCCCACTCTTGCAATGCAGAACCACCGGAGAAGATGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1888

Amino Acids

209.14

Weight (kDa)

5.21

Isoelectric Point (pI)

49.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
XPG_N PF00752 1 - 97 1.6e-29 XPG N-terminal domain
XPG_I PF00867 961 - 1042 1.6e-27 XPG I-region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 294, 4157
Acc36I ACCTGC 3 cut(s) 210, 1775, 4149
Acc65I GGTACC 1 cut(s) 4919
AccB1I GGYRCC 1 cut(s) 4919
AccB7I CCANNNNNTGG 3 cut(s) 4685, 4805, 5602
AccI GTMKAC 1 cut(s) 2884
AccII CGCG 8 cut(s) 48, 92, 129, 158, 1071, 2998, 4832, 4913
AccIII TCCGGA 1 cut(s) 306
AcoI YGGCCR 2 cut(s) 40, 81
AcsI RAATTY 6 cut(s) 1157, 1429, 2618, 3209, 3423, 4539
AcyI GRCGYC 1 cut(s) 6
AdeI CACNNNGTG 1 cut(s) 1652
AfaI GTAC 8 cut(s) 1197, 2221, 2413, 3650, 3832, 4021, 4032, 4921
AflII CTTAAG 2 cut(s) 341, 1049
AflIII ACRYGT 1 cut(s) 3690
AhdI GACNNNNNGTC 1 cut(s) 3265
AhlI ACTAGT 1 cut(s) 4418
AjnI CCWGG 7 cut(s) 489, 1618, 2011, 3281, 4426, 4678, 5480
AjuI GAANNNNNNNTTGG 6 cut(s) 1237, 1269, 4605, 4637, 5024, 5056
AleI CACNNNNGTG 1 cut(s) 1601
AloI GAACNNNNNNTCC 4 cut(s) 2142, 2174, 3615, 3647
Alw21I GWGCWC 3 cut(s) 1503, 4339, 5573
Alw44I GTGCAC 1 cut(s) 4335
AlwNI CAGNNNCTG 3 cut(s) 2866, 3269, 5174
Ama87I CYCGRG 2 cut(s) 1540, 2084
Aor13HI TCCGGA 1 cut(s) 306
AoxI GGCC 9 cut(s) 40, 81, 471, 3199, 4278, 4360, 5002, 5045, 5525
ApaLI GTGCAC 1 cut(s) 4335
ApoI RAATTY 6 cut(s) 1157, 1429, 2618, 3209, 3423, 4539
AseI ATTAAT 2 cut(s) 2466, 2679
Asp700I GAANNNNTTC 1 cut(s) 2157
Asp718I GGTACC 1 cut(s) 4919
AspLEI GCGC 9 cut(s) 129, 160, 247, 255, 295, 2998, 4158, 4913, 4915
AspS9I GGNCC 6 cut(s) 148, 207, 1009, 1536, 2383, 4360
AvaI CYCGRG 2 cut(s) 1540, 2084
AvaII GGWCC 5 cut(s) 148, 207, 1009, 1536, 2383
AxyI CCTNAGG 1 cut(s) 3189
BaeGI GKGCMC 1 cut(s) 4339
BaeI ACNNNNGTAYC 6 cut(s) 974, 1007, 4551, 4584, 5148, 5181
BalI TGGCCA 1 cut(s) 83
BamHI GGATCC 1 cut(s) 1401
BanI GGYRCC 1 cut(s) 4919
BarI GAAGNNNNNNTAC 6 cut(s) 606, 638, 855, 887, 3814, 3846
BbsI GAAGAC 7 cut(s) 82, 603, 1607, 1731, 4479, 5317, 5428
Bbv12I GWGCWC 3 cut(s) 1503, 4339, 5573
BbvCI CCTCAGC 3 cut(s) 369, 1807, 3957
BceAI ACGGC 2 cut(s) 247, 2583
BcgI CGANNNNNNTGC 4 cut(s) 247, 281, 4235, 4269
BciT130I CCWGG 7 cut(s) 491, 1620, 2013, 3283, 4428, 4680, 5482
BclI TGATCA 4 cut(s) 2626, 4444, 4741, 5556
BcuI ACTAGT 1 cut(s) 4418
BfmI CTRYAG 3 cut(s) 1707, 5055, 5160
BfoI RGCGCY 2 cut(s) 248, 256
BfrI CTTAAG 2 cut(s) 341, 1049
BfuAI ACCTGC 3 cut(s) 210, 1775, 4149
BglI GCCNNNNNGGC 1 cut(s) 5010
BglII AGATCT 1 cut(s) 3352
BlpI GCTNAGC 1 cut(s) 300
BmcAI AGTACT 2 cut(s) 1197, 3832
Bme1390I CCNGG 7 cut(s) 491, 1620, 2013, 3283, 4428, 4680, 5482
Bme18I GGWCC 5 cut(s) 148, 207, 1009, 1536, 2383
BmeRI GACNNNNNGTC 1 cut(s) 3265
BmeT110I CYCGRG 2 cut(s) 1540, 2084
BmgT120I GGNCC 6 cut(s) 148, 207, 1009, 1536, 2383, 4360
BmiI GGNNCC 4 cut(s) 1011, 1403, 1538, 4921
BmrFI CCNGG 7 cut(s) 491, 1620, 2013, 3283, 4428, 4680, 5482
BmrI ACTGGG 3 cut(s) 1870, 2201, 4043
BmuI ACTGGG 3 cut(s) 1870, 2201, 4043
BpiI GAAGAC 7 cut(s) 82, 603, 1607, 1731, 4479, 5317, 5428
BplI GAGNNNNNCTC 2 cut(s) 5560, 5592
BpmI CTGGAG 3 cut(s) 3777, 4053, 5196
Bpu10I CCTNAGC 5 cut(s) 64, 369, 1807, 2706, 3957
Bpu1102I GCTNAGC 1 cut(s) 300
BpuEI CTTGAG 3 cut(s) 233, 3377, 4400
Bsa29I ATCGAT 1 cut(s) 929
BsaAI YACGTR 1 cut(s) 3719
BsaBI GATNNNNATC 3 cut(s) 897, 4221, 4826
BsaHI GRCGYC 1 cut(s) 6
BsaI GGTCTC 2 cut(s) 20, 53
BsaJI CCNNGG 5 cut(s) 10, 411, 729, 2011, 3768
BsaWI WCCGGW 2 cut(s) 306, 5648
BsaXI ACNNNNNCTCC 7 cut(s) 132, 162, 2142, 2172, 4349, 4379, 5643
Bse118I RCCGGY 2 cut(s) 214, 241
Bse21I CCTNAGG 1 cut(s) 3189
Bse3DI GCAATG 9 cut(s) 129, 888, 917, 1375, 2594, 4444, 5523, 5541, 5642
Bse8I GATNNNNATC 3 cut(s) 897, 4221, 4826
BseAI TCCGGA 1 cut(s) 306
BseBI CCWGG 7 cut(s) 491, 1620, 2013, 3283, 4428, 4680, 5482
BseCI ATCGAT 1 cut(s) 929
BseDI CCNNGG 5 cut(s) 10, 411, 729, 2011, 3768
BseJI GATNNNNATC 3 cut(s) 897, 4221, 4826
BseMI GCAATG 9 cut(s) 129, 888, 917, 1375, 2594, 4444, 5523, 5541, 5642
BsePI GCGCGC 1 cut(s) 4911
BseRI GAGGAG 6 cut(s) 17, 605, 1880, 2092, 2768, 3206
BseSI GKGCMC 1 cut(s) 4339
BseX3I CGGCCG 1 cut(s) 40
BseYI CCCAGC 3 cut(s) 1490, 3585, 3842
BsgI GTGCAG 2 cut(s) 1106, 4863
Bsh1236I CGCG 8 cut(s) 48, 92, 129, 158, 1071, 2998, 4832, 4913
Bsh1285I CGRYCG 1 cut(s) 43
BshFI GGCC 9 cut(s) 42, 83, 473, 3201, 4280, 4362, 5004, 5047, 5527
BshNI GGYRCC 1 cut(s) 4919
BshVI ATCGAT 1 cut(s) 929
BsiEI CGRYCG 1 cut(s) 43
BsiHKAI GWGCWC 3 cut(s) 1503, 4339, 5573
BsiHKCI CYCGRG 2 cut(s) 1540, 2084
BsiSI CCGG 7 cut(s) 69, 181, 215, 242, 274, 307, 5649
BslFI GGGAC 3 cut(s) 1522, 1885, 3617
BsmBI CGTCTC 1 cut(s) 55
BsmFI GGGAC 3 cut(s) 1522, 1885, 3617
BsmI GAATGC 4 cut(s) 295, 1252, 3787, 5398
BsnI GGCC 9 cut(s) 42, 83, 473, 3201, 4280, 4362, 5004, 5047, 5527
Bso31I GGTCTC 2 cut(s) 20, 53
BsoBI CYCGRG 2 cut(s) 1540, 2084
Bsp1286I GDGCHC 3 cut(s) 1503, 4339, 5573
Bsp13I TCCGGA 1 cut(s) 306
Bsp1720I GCTNAGC 1 cut(s) 300
Bsp68I TCGCGA 1 cut(s) 1071
BspANI GGCC 9 cut(s) 42, 83, 473, 3201, 4280, 4362, 5004, 5047, 5527
BspDI ATCGAT 1 cut(s) 929
BspEI TCCGGA 1 cut(s) 306
BspFNI CGCG 8 cut(s) 48, 92, 129, 158, 1071, 2998, 4832, 4913
BspHI TCATGA 3 cut(s) 114, 2656, 4543
BspLI GGNNCC 4 cut(s) 1011, 1403, 1538, 4921
BspMI ACCTGC 3 cut(s) 210, 1775, 4149
BspQI GCTCTTC 2 cut(s) 609, 2290
BspT107I GGYRCC 1 cut(s) 4919
BspTI CTTAAG 2 cut(s) 341, 1049
BspTNI GGTCTC 2 cut(s) 20, 53
BsrDI GCAATG 9 cut(s) 129, 888, 917, 1375, 2594, 4444, 5523, 5541, 5642
BsrFI RCCGGY 2 cut(s) 214, 241
BssAI RCCGGY 2 cut(s) 214, 241
BssECI CCNNGG 5 cut(s) 10, 411, 729, 2011, 3768
BssHII GCGCGC 1 cut(s) 4911
BssNAI GTATAC 1 cut(s) 2885
BssNI GRCGYC 1 cut(s) 6
BssT1I CCWWGG 2 cut(s) 411, 729
Bst1107I GTATAC 1 cut(s) 2885
Bst2UI CCWGG 7 cut(s) 491, 1620, 2013, 3283, 4428, 4680, 5482
BstACI GRCGYC 1 cut(s) 6
BstAFI CTTAAG 2 cut(s) 341, 1049
BstAPI GCANNNNNTGC 2 cut(s) 761, 3582
BstBAI YACGTR 1 cut(s) 3719
BstDSI CCRYGG 1 cut(s) 10
BstEII GGTNACC 2 cut(s) 1480, 5314
BstENI CCTNNNNNAGG 1 cut(s) 4806
BstFNI CGCG 8 cut(s) 48, 92, 129, 158, 1071, 2998, 4832, 4913
BstH2I RGCGCY 2 cut(s) 248, 256
BstHHI GCGC 9 cut(s) 129, 160, 247, 255, 295, 2998, 4158, 4913, 4915
BstMCI CGRYCG 1 cut(s) 43
BstNI CCWGG 7 cut(s) 491, 1620, 2013, 3283, 4428, 4680, 5482
BstPI GGTNACC 2 cut(s) 1480, 5314
BstSCI CCNGG 7 cut(s) 489, 1618, 2011, 3281, 4426, 4678, 5480
BstSFI CTRYAG 3 cut(s) 1707, 5055, 5160
BstSLI GKGCMC 1 cut(s) 4339
BstSNI TACGTA 1 cut(s) 3719
BstUI CGCG 8 cut(s) 48, 92, 129, 158, 1071, 2998, 4832, 4913
BstV2I GAAGAC 7 cut(s) 82, 603, 1607, 1731, 4479, 5317, 5428
BstX2I RGATCY 5 cut(s) 1401, 1435, 1585, 3352, 5220
BstXI CCANNNNNNTGG 1 cut(s) 2231
BstYI RGATCY 5 cut(s) 1401, 1435, 1585, 3352, 5220
BstZ17I GTATAC 1 cut(s) 2885
BstZI CGGCCG 1 cut(s) 40
Bsu15I ATCGAT 1 cut(s) 929
Bsu36I CCTNAGG 1 cut(s) 3189
BsuRI GGCC 9 cut(s) 42, 83, 473, 3201, 4280, 4362, 5004, 5047, 5527
BsuTUI ATCGAT 1 cut(s) 929
BtgI CCRYGG 1 cut(s) 10
BtgZI GCGATG 1 cut(s) 2405
BtsI GCAGTG 2 cut(s) 1596, 2845
BtuMI TCGCGA 1 cut(s) 1071
BveI ACCTGC 3 cut(s) 210, 1775, 4149
CaiI CAGNNNCTG 3 cut(s) 2866, 3269, 5174
CciI TCATGA 3 cut(s) 114, 2656, 4543
CfoI GCGC 9 cut(s) 129, 160, 247, 255, 295, 2998, 4158, 4913, 4915
Cfr10I RCCGGY 2 cut(s) 214, 241
Cfr13I GGNCC 6 cut(s) 148, 207, 1009, 1536, 2383, 4360
ClaI ATCGAT 1 cut(s) 929
CseI GACGC 3 cut(s) 37, 98, 507
CsiI ACCWGGT 3 cut(s) 4426, 4678, 5480
Csp6I GTAC 8 cut(s) 1196, 2220, 2412, 3649, 3831, 4020, 4031, 4920
CspCI CAANNNNNGTGG 2 cut(s) 5198, 5233
CviQI GTAC 8 cut(s) 1196, 2220, 2412, 3649, 3831, 4020, 4031, 4920
DraI TTTAAA 1 cut(s) 2418
DraIII CACNNNGTG 1 cut(s) 1652
DriI GACNNNNNGTC 1 cut(s) 3265
EaeI YGGCCR 2 cut(s) 40, 81
EagI CGGCCG 1 cut(s) 40
Eam1105I GACNNNNNGTC 1 cut(s) 3265
EciI GGCGGA 4 cut(s) 249, 545, 989, 3978
EclXI CGGCCG 1 cut(s) 40
Eco105I TACGTA 1 cut(s) 3719
Eco130I CCWWGG 2 cut(s) 411, 729
Eco147I AGGCCT 2 cut(s) 5047, 5527
Eco31I GGTCTC 2 cut(s) 20, 53
Eco32I GATATC 1 cut(s) 1716
Eco47I GGWCC 5 cut(s) 148, 207, 1009, 1536, 2383
Eco52I CGGCCG 1 cut(s) 40
Eco81I CCTNAGG 1 cut(s) 3189
Eco88I CYCGRG 2 cut(s) 1540, 2084
Eco91I GGTNACC 2 cut(s) 1480, 5314
EcoNI CCTNNNNNAGG 1 cut(s) 4806
EcoO109I RGGNCCY 2 cut(s) 1009, 1536
EcoO65I GGTNACC 2 cut(s) 1480, 5314
EcoRI GAATTC 1 cut(s) 4539
EcoRII CCWGG 7 cut(s) 489, 1618, 2011, 3281, 4426, 4678, 5480
EcoRV GATATC 1 cut(s) 1716
EcoT14I CCWWGG 2 cut(s) 411, 729
EcoT22I ATGCAT 4 cut(s) 639, 799, 888, 3184
ErhI CCWWGG 2 cut(s) 411, 729
Esp3I CGTCTC 1 cut(s) 55
FalI AAGNNNNNCTT 6 cut(s) 3523, 3555, 4362, 4394, 5207, 5239
FaqI GGGAC 3 cut(s) 1522, 1885, 3617
FauI CCCGC 1 cut(s) 276
FauNDI CATATG 4 cut(s) 98, 3336, 3545, 4125
FbaI TGATCA 4 cut(s) 2626, 4444, 4741, 5556
FblI GTMKAC 1 cut(s) 2884
FspI TGCGCA 2 cut(s) 294, 4157
GlaI GCGC 9 cut(s) 128, 159, 246, 254, 294, 2997, 4157, 4912, 4914
GsaI CCCAGC 3 cut(s) 1494, 3589, 3846
GsuI CTGGAG 3 cut(s) 3777, 4053, 5196
HaeII RGCGCY 2 cut(s) 248, 256
HaeIII GGCC 9 cut(s) 42, 83, 473, 3201, 4280, 4362, 5004, 5047, 5527
HapII CCGG 7 cut(s) 69, 181, 215, 242, 274, 307, 5649
HgaI GACGC 3 cut(s) 37, 98, 507
HhaI GCGC 9 cut(s) 129, 160, 247, 255, 295, 2998, 4158, 4913, 4915
Hin1I GRCGYC 1 cut(s) 6
Hin6I GCGC 9 cut(s) 127, 158, 245, 253, 293, 2996, 4156, 4911, 4913
HinP1I GCGC 9 cut(s) 127, 158, 245, 253, 293, 2996, 4156, 4911, 4913
HincII GTYRAC 3 cut(s) 2203, 3607, 3850
HindII GTYRAC 3 cut(s) 2203, 3607, 3850
HindIII AAGCTT 2 cut(s) 3681, 5599
HpaI GTTAAC 1 cut(s) 3607
HpaII CCGG 7 cut(s) 69, 181, 215, 242, 274, 307, 5649
Hpy99I CGWCG 8 cut(s) 41, 59, 92, 134, 233, 523, 1071, 4286
HpyCH4IV ACGT 4 cut(s) 2818, 3036, 3692, 3718
HpySE526I ACGT 4 cut(s) 2818, 3036, 3692, 3718
Hsp92I GRCGYC 1 cut(s) 6
HspAI GCGC 9 cut(s) 127, 158, 245, 253, 293, 2996, 4156, 4911, 4913
Kpn2I TCCGGA 1 cut(s) 306
KpnI GGTACC 1 cut(s) 4923
KroI GCCGGC 1 cut(s) 241
KroNI GCCGGC 1 cut(s) 243
Ksp22I TGATCA 4 cut(s) 2626, 4444, 4741, 5556
KspAI GTTAAC 1 cut(s) 3607
LguI GCTCTTC 2 cut(s) 609, 2290
LmnI GCTCC 3 cut(s) 309, 2863, 5177
MabI ACCWGGT 3 cut(s) 4426, 4678, 5480
MaeII ACGT 4 cut(s) 2818, 3036, 3692, 3718
MfeI CAATTG 1 cut(s) 3367
MflI RGATCY 5 cut(s) 1401, 1435, 1585, 3352, 5220
MhlI GDGCHC 3 cut(s) 1503, 4339, 5573
MlsI TGGCCA 1 cut(s) 83
MluNI TGGCCA 1 cut(s) 83
MlyI GAGTC 8 cut(s) 1386, 2089, 2600, 2662, 2966, 3275, 3658, 4203
MmeI TCCRAC 4 cut(s) 3237, 3428, 3853, 4095
Mox20I TGGCCA 1 cut(s) 83
Mph1103I ATGCAT 4 cut(s) 639, 799, 888, 3184
MreI CGCCGGCG 1 cut(s) 241
MroI TCCGGA 1 cut(s) 306
MroNI GCCGGC 1 cut(s) 241
MroXI GAANNNNTTC 1 cut(s) 2157
MscI TGGCCA 1 cut(s) 83
MslI CAYNNNNRTG 7 cut(s) 101, 891, 1601, 2661, 3339, 4484, 5420
Msp20I TGGCCA 1 cut(s) 83
MspA1I CMGCKG 4 cut(s) 283, 656, 905, 1205
MspCI CTTAAG 2 cut(s) 341, 1049
MspI CCGG 7 cut(s) 69, 181, 215, 242, 274, 307, 5649
MspR9I CCNGG 7 cut(s) 491, 1620, 2013, 3283, 4428, 4680, 5482
MunI CAATTG 1 cut(s) 3367
Mva1269I GAATGC 4 cut(s) 295, 1252, 3787, 5398
MvaI CCWGG 7 cut(s) 491, 1620, 2013, 3283, 4428, 4680, 5482
MvnI CGCG 8 cut(s) 48, 92, 129, 158, 1071, 2998, 4832, 4913
NaeI GCCGGC 1 cut(s) 243
NdeI CATATG 4 cut(s) 98, 3336, 3545, 4125
NgoMIV GCCGGC 1 cut(s) 241
NlaIV GGNNCC 4 cut(s) 1011, 1403, 1538, 4921
NmeAIII GCCGAG 2 cut(s) 147, 343
NmuCI GTSAC 3 cut(s) 1294, 1856, 2962
NruI TCGCGA 1 cut(s) 1071
NsbI TGCGCA 2 cut(s) 294, 4157
NsiI ATGCAT 4 cut(s) 639, 799, 888, 3184
OliI CACNNNNGTG 1 cut(s) 1601
PaeR7I CTCGAG 1 cut(s) 2084
PagI TCATGA 3 cut(s) 114, 2656, 4543
PauI GCGCGC 1 cut(s) 4911
PceI AGGCCT 2 cut(s) 5047, 5527
PciSI GCTCTTC 2 cut(s) 609, 2290
PcsI WCGNNNNNNNCGW 1 cut(s) 45
PctI GAATGC 4 cut(s) 295, 1252, 3787, 5398
PdiI GCCGGC 1 cut(s) 243
PdmI GAANNNNTTC 1 cut(s) 2157
PflMI CCANNNNNTGG 3 cut(s) 4685, 4805, 5602
PleI GAGTC 8 cut(s) 1385, 2088, 2599, 2661, 2966, 3274, 3658, 4202
PpsI GAGTC 8 cut(s) 1385, 2088, 2599, 2661, 2966, 3274, 3658, 4202
Ppu21I YACGTR 1 cut(s) 3719
PpuMI RGGWCCY 2 cut(s) 1009, 1536
PshBI ATTAAT 2 cut(s) 2466, 2679
Psp5II RGGWCCY 2 cut(s) 1009, 1536
Psp6I CCWGG 7 cut(s) 489, 1618, 2011, 3281, 4426, 4678, 5480
PspEI GGTNACC 2 cut(s) 1480, 5314
PspFI CCCAGC 3 cut(s) 1490, 3585, 3842
PspGI CCWGG 7 cut(s) 489, 1618, 2011, 3281, 4426, 4678, 5480
PspN4I GGNNCC 4 cut(s) 1011, 1403, 1538, 4921
PspPI GGNCC 6 cut(s) 148, 207, 1009, 1536, 2383, 4360
PspPPI RGGWCCY 2 cut(s) 1009, 1536
PstNI CAGNNNCTG 3 cut(s) 2866, 3269, 5174
PsuI RGATCY 5 cut(s) 1401, 1435, 1585, 3352, 5220
PteI GCGCGC 1 cut(s) 4911
PvuII CAGCTG 2 cut(s) 656, 905
RruI TCGCGA 1 cut(s) 1071
RsaI GTAC 8 cut(s) 1197, 2221, 2413, 3650, 3832, 4021, 4032, 4921
RsaNI GTAC 8 cut(s) 1196, 2220, 2412, 3649, 3831, 4020, 4031, 4920
RseI CAYNNNNRTG 7 cut(s) 101, 891, 1601, 2661, 3339, 4484, 5420
SapI GCTCTTC 2 cut(s) 609, 2290
Sau96I GGNCC 6 cut(s) 148, 207, 1009, 1536, 2383, 4360
ScaI AGTACT 2 cut(s) 1197, 3832
SchI GAGTC 8 cut(s) 1386, 2089, 2600, 2662, 2966, 3275, 3658, 4203
ScrFI CCNGG 7 cut(s) 491, 1620, 2013, 3283, 4428, 4680, 5482
SduI GDGCHC 3 cut(s) 1503, 4339, 5573
SexAI ACCWGGT 3 cut(s) 4426, 4678, 5480
SfcI CTRYAG 3 cut(s) 1707, 5055, 5160
Sfr274I CTCGAG 1 cut(s) 2084
SgrAI CRCCGGYG 1 cut(s) 241
SinI GGWCC 5 cut(s) 148, 207, 1009, 1536, 2383
SlaI CTCGAG 1 cut(s) 2084
SmiMI CAYNNNNRTG 7 cut(s) 101, 891, 1601, 2661, 3339, 4484, 5420
SmlI CTYRAG 6 cut(s) 248, 341, 1049, 2084, 3356, 4379
SmoI CTYRAG 6 cut(s) 248, 341, 1049, 2084, 3356, 4379
SnaBI TACGTA 1 cut(s) 3719
SpeI ACTAGT 1 cut(s) 4418
SseBI AGGCCT 2 cut(s) 5047, 5527
SspI AATATT 2 cut(s) 2464, 3016
StuI AGGCCT 2 cut(s) 5047, 5527
StyD4I CCNGG 7 cut(s) 489, 1618, 2011, 3281, 4426, 4678, 5480
StyI CCWWGG 2 cut(s) 411, 729
TaiI ACGT 4 cut(s) 2821, 3039, 3695, 3721
TaqII GACCGA 1 cut(s) 5295
TatI WGTACW 3 cut(s) 1195, 3648, 3830
TauI GCSGC 6 cut(s) 45, 48, 258, 767, 3676, 5264
TseFI GTSAC 3 cut(s) 1294, 1856, 2962
Tsp45I GTSAC 3 cut(s) 1294, 1856, 2962
TspGWI ACGGA 5 cut(s) 43, 1055, 1147, 2821, 4354
Van91I CCANNNNNTGG 3 cut(s) 4685, 4805, 5602
Vha464I CTTAAG 2 cut(s) 341, 1049
VneI GTGCAC 1 cut(s) 4335
VpaK11BI GGWCC 5 cut(s) 148, 207, 1009, 1536, 2383
VspI ATTAAT 2 cut(s) 2466, 2679
XagI CCTNNNNNAGG 1 cut(s) 4806
XapI RAATTY 6 cut(s) 1157, 1429, 2618, 3209, 3423, 4539
XbaI TCTAGA 1 cut(s) 4790
XhoI CTCGAG 1 cut(s) 2084
XmiI GTMKAC 1 cut(s) 2884
XmnI GAANNNNTTC 1 cut(s) 2157
ZrmI AGTACT 2 cut(s) 1197, 3832
Zsp2I ATGCAT 4 cut(s) 639, 799, 888, 3184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.