Prupe.3G284100_v2.0.a1

Protein farnesyltransferase subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
25775919 .. 25780151
4233 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G284100.1

Sequence Viewer

Length: 1344 bp
ATGGAGCTTCCGGTTGCAACAGTGACTCAGCACGATCAATGGAAGGTGGAGAGTCAGGTCTTTCGGATCTACGATCTCTTTGGCAACCTTCCCCCCAACGCCCAATCCGTAATGATCGAACTTCAGCGTGATAATCACATAGAGTACTTAACGAGAGGCCTCAGACAACTCCCTCCCTCGTTCTGCACTTTGGATGCCAGTCGGCCTTGGCTGTGCTATTGGATTCTGCATTCATTGGCTTTACTAGGGGAGTCTGTTGATGATGAACTGGAACATAACACCATTGACTTCCTTAGCCGTTGCCAGGACCCAAGTGGTGGATATGGCGGCGGACCTGGACAGCTGCCACATCTGGCAACAACTTATGCTGCAGTCAATGCACTCATAACTGTCGGTGGTGATCAAGCTCTCTCATCAATTAATAGATGTGAACTATACAAGTTTCTGCAGCAAATGAAACATCCAAGCGGTGGCTTCAGGATGCATGATGGTGGAGAAATTGATGTCCGGGCTTGCTACACTGCGATTTCTGTAGCAAGTATTTTGAACATTTTGGATGATGACCTGGTTCATAATGTTGGAAGTTTCATCTTAAGTTGTCAGACTTATGAAGGTGGCATTTCTGGGGAACCTGGTTCTGAAGCTCATGGCGGGTACACCTTTTGTGGGGTGGCTACAATGATTCTAATCAATCAGATCAATCGTTTGGACTTGCCCAGACTAATTGATTGGTTGGTATTTCGACAAGGGAAGGAGTTTGGATTTCAGGGGAGGACTAATAAATTGGTTGATGGTTGCTACTCCTTTTGGCAGGGAGGTGTTTTTCCATTATTACAAAGAGTGCGTTCAATTATTGATGAACAACTCGTGCTCCCAGACGCTGGAGGACACTCTACTACGAATGGCACACACACTTCTACGACATCTAGTATATCTGAAGTGGGGGAAAGTTTTGAAGGCACTTCATCTCATGTTGATGATGCTTGCCATTCTAGGCAGGAAGTGAATTTCAATGATATCGGTTATAATTTTGTCAAGAGGCCTATAGAAATGGAGCCACTTTTTCACAGCCTGGCATTGCAGCAATACATACTTTTATGCTCACAGGAGGAGAAGGGTGGGATGAAAGACAAACCTGGGCTATCTAGGGATTTCTACCACACATGCTATTGTCTGAGTGGTCTCTCTGTATGCCAACATATGTGGTCGGATGAAGAAGACTCTCCAGTGTTGCCTAGAGCATTAATGGGTTCCTATTCCAATTTGTTGGAACCAATACATCCCCTCTTCAATGTTGTCTTAGAACAGTACCATGAAGCCCGGGAATTCTTTACAAGAGACTGA

Protein Analysis

448

Amino Acids

49.95

Weight (kDa)

5.02

Isoelectric Point (pI)

48.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1026
AccB7I CCANNNNNTGG 3 cut(s) 317, 470, 881
AciI CCGC 4 cut(s) 327, 330, 468, 651
AclWI GGATC 1 cut(s) 74
AcsI RAATTY 2 cut(s) 1006, 1325
AcuI CTGAAG 4 cut(s) 107, 460, 660, 957
AfaI GTAC 3 cut(s) 146, 656, 1310
AfiI CCNNNNNNNGG 5 cut(s) 304, 317, 470, 666, 881
AflII CTTAAG 1 cut(s) 592
AgsI TTSAA 5 cut(s) 547, 849, 956, 1012, 1291
AjnI CCWGG 6 cut(s) 303, 334, 564, 631, 1071, 1135
AluBI AGCT 4 cut(s) 7, 343, 407, 644
AluI AGCT 4 cut(s) 7, 343, 407, 644
Alw21I GWGCWC 1 cut(s) 873
Alw26I GTCTC 2 cut(s) 1187, 1332
AlwI GGATC 1 cut(s) 74
AlwNI CAGNNNCTG 1 cut(s) 881
Ama87I CYCGRG 1 cut(s) 1320
AoxI GGCC 3 cut(s) 157, 203, 1040
ApeKI GCWGC 4 cut(s) 343, 368, 448, 1081
ApoI RAATTY 2 cut(s) 1006, 1325
AseI ATTAAT 2 cut(s) 420, 1244
AspS9I GGNCC 2 cut(s) 307, 332
AsuC2I CCSGG 3 cut(s) 509, 1321, 1322
AsuHPI GGTGA 1 cut(s) 410
AvaI CYCGRG 1 cut(s) 1320
AvaII GGWCC 2 cut(s) 307, 332
BauI CACGAG 1 cut(s) 866
BbsI GAAGAC 1 cut(s) 1224
Bbv12I GWGCWC 1 cut(s) 873
BbvI GCAGC 4 cut(s) 330, 355, 460, 1093
BccI CCATC 2 cut(s) 482, 785
BceAI ACGGC 1 cut(s) 282
BciT130I CCWGG 6 cut(s) 305, 336, 566, 633, 1073, 1137
BclI TGATCA 1 cut(s) 400
BcnI CCSGG 3 cut(s) 509, 1321, 1322
BcoDI GTCTC 2 cut(s) 1187, 1332
BfaI CTAG 5 cut(s) 245, 927, 993, 1146, 1236
BfmI CTRYAG 4 cut(s) 369, 446, 531, 1044
BfrI CTTAAG 1 cut(s) 592
BisI GCNGC 5 cut(s) 328, 344, 369, 449, 1082
BlsI GCNGC 5 cut(s) 329, 345, 370, 450, 1083
BmcAI AGTACT 1 cut(s) 146
Bme1390I CCNGG 9 cut(s) 305, 336, 509, 566, 633, 1073, 1137, 1321, 1322
Bme18I GGWCC 2 cut(s) 307, 332
BmeT110I CYCGRG 1 cut(s) 1320
BmgT120I GGNCC 2 cut(s) 307, 332
BmiI GGNNCC 5 cut(s) 309, 630, 1056, 1252, 1272
BmrFI CCNGG 9 cut(s) 305, 336, 509, 566, 633, 1073, 1137, 1321, 1322
BmsI GCATC 3 cut(s) 184, 471, 970
BpiI GAAGAC 1 cut(s) 1224
BpmI CTGGAG 2 cut(s) 903, 1209
Bpu10I CCTNAGC 1 cut(s) 293
BpuMI CCSGG 3 cut(s) 509, 1321, 1322
BsaBI GATNNNNATC 1 cut(s) 686
BsaI GGTCTC 1 cut(s) 1187
BsaJI CCNNGG 3 cut(s) 206, 1136, 1320
BsaWI WCCGGW 1 cut(s) 10
BsaXI ACNNNNNCTCC 2 cut(s) 855, 885
Bsc4I CCNNNNNNNGG 5 cut(s) 304, 317, 470, 666, 881
Bse1I ACTGG 3 cut(s) 198, 273, 1226
Bse3DI GCAATG 1 cut(s) 1076
Bse8I GATNNNNATC 1 cut(s) 686
BseBI CCWGG 6 cut(s) 305, 336, 566, 633, 1073, 1137
BseDI CCNNGG 3 cut(s) 206, 1136, 1320
BseGI GGATG 7 cut(s) 199, 460, 486, 562, 1128, 1216, 1279
BseJI GATNNNNATC 1 cut(s) 686
BseLI CCNNNNNNNGG 5 cut(s) 304, 317, 470, 666, 881
BseMI GCAATG 1 cut(s) 1076
BseMII CTCAG 3 cut(s) 41, 175, 1166
BseNI ACTGG 3 cut(s) 198, 273, 1226
BseRI GAGGAG 1 cut(s) 1124
BseXI GCAGC 4 cut(s) 330, 355, 460, 1093
BsgI GTGCAG 1 cut(s) 169
BshFI GGCC 3 cut(s) 159, 205, 1042
BsiHKAI GWGCWC 1 cut(s) 873
BsiHKCI CYCGRG 1 cut(s) 1320
BsiSI CCGG 3 cut(s) 11, 508, 1321
BslI CCNNNNNNNGG 5 cut(s) 304, 317, 470, 666, 881
BsmAI GTCTC 2 cut(s) 1187, 1332
BsmI GAATGC 1 cut(s) 229
BsnI GGCC 3 cut(s) 159, 205, 1042
Bso31I GGTCTC 1 cut(s) 1187
BsoBI CYCGRG 1 cut(s) 1320
Bsp1286I GDGCHC 1 cut(s) 873
Bsp143I GATC 6 cut(s) 34, 66, 73, 114, 400, 696
BspACI CCGC 4 cut(s) 327, 330, 468, 651
BspANI GGCC 3 cut(s) 159, 205, 1042
BspCNI CTCAG 3 cut(s) 40, 174, 1167
BspLI GGNNCC 5 cut(s) 309, 630, 1056, 1252, 1272
BspMAI CTGCAG 2 cut(s) 373, 450
BspPI GGATC 1 cut(s) 74
BspTI CTTAAG 1 cut(s) 592
BspTNI GGTCTC 1 cut(s) 1187
BsrDI GCAATG 1 cut(s) 1076
BsrI ACTGG 3 cut(s) 198, 273, 1226
BssECI CCNNGG 3 cut(s) 206, 1136, 1320
BssMI GATC 6 cut(s) 34, 66, 73, 114, 400, 696
BssSI CACGAG 1 cut(s) 866
BssT1I CCWWGG 1 cut(s) 206
Bst2BI CACGAG 1 cut(s) 866
Bst2UI CCWGG 6 cut(s) 305, 336, 566, 633, 1073, 1137
Bst4CI ACNGT 3 cut(s) 22, 391, 1308
Bst6I CTCTTC 1 cut(s) 1292
BstAFI CTTAAG 1 cut(s) 592
BstAPI GCANNNNNTGC 1 cut(s) 377
BstC8I GCNNGC 2 cut(s) 514, 985
BstDEI CTNAG 5 cut(s) 27, 161, 293, 1175, 1300
BstF5I GGATG 7 cut(s) 199, 460, 486, 562, 1128, 1216, 1279
BstKTI GATC 6 cut(s) 37, 69, 76, 117, 403, 699
BstMAI GTCTC 2 cut(s) 1187, 1332
BstMBI GATC 6 cut(s) 34, 66, 73, 114, 400, 696
BstMWI GCNNNNNNNGC 1 cut(s) 377
BstNI CCWGG 6 cut(s) 305, 336, 566, 633, 1073, 1137
BstNSI RCATGY 1 cut(s) 1167
BstSCI CCNGG 9 cut(s) 303, 334, 507, 564, 631, 1071, 1135, 1319, 1320
BstSFI CTRYAG 4 cut(s) 369, 446, 531, 1044
BstV1I GCAGC 4 cut(s) 330, 355, 460, 1093
BstV2I GAAGAC 1 cut(s) 1224
BstX2I RGATCY 1 cut(s) 66
BstXI CCANNNNNNTGG 1 cut(s) 1267
BstYI RGATCY 1 cut(s) 66
BsuRI GGCC 3 cut(s) 159, 205, 1042
BtsCI GGATG 7 cut(s) 199, 460, 486, 562, 1128, 1216, 1279
BtsI GCAGTG 1 cut(s) 519
BtsIMutI CAGTG 3 cut(s) 27, 519, 1233
Cac8I GCNNGC 2 cut(s) 514, 985
CaiI CAGNNNCTG 1 cut(s) 881
Cfr13I GGNCC 2 cut(s) 307, 332
Cfr9I CCCGGG 1 cut(s) 1320
CseI GACGC 1 cut(s) 887
CsiI ACCWGGT 2 cut(s) 564, 631
Csp6I GTAC 3 cut(s) 145, 655, 1309
CspCI CAANNNNNGTGG 2 cut(s) 1184, 1219
CviAII CATG 5 cut(s) 485, 647, 971, 1164, 1313
CviQI GTAC 3 cut(s) 145, 655, 1309
DdeI CTNAG 5 cut(s) 27, 161, 293, 1175, 1300
DpnI GATC 6 cut(s) 36, 68, 75, 116, 402, 698
DpnII GATC 6 cut(s) 34, 66, 73, 114, 400, 696
Eam1104I CTCTTC 1 cut(s) 1292
EarI CTCTTC 1 cut(s) 1292
EciI GGCGGA 1 cut(s) 345
Eco130I CCWWGG 1 cut(s) 206
Eco147I AGGCCT 2 cut(s) 159, 1042
Eco31I GGTCTC 1 cut(s) 1187
Eco32I GATATC 1 cut(s) 1018
Eco47I GGWCC 2 cut(s) 307, 332
Eco57I CTGAAG 4 cut(s) 107, 460, 660, 957
Eco88I CYCGRG 1 cut(s) 1320
EcoO109I RGGNCCY 1 cut(s) 307
EcoRI GAATTC 1 cut(s) 1325
EcoRII CCWGG 6 cut(s) 303, 334, 564, 631, 1071, 1135
EcoRV GATATC 1 cut(s) 1018
EcoT14I CCWWGG 1 cut(s) 206
EcoT22I ATGCAT 1 cut(s) 486
ErhI CCWWGG 1 cut(s) 206
FaeI CATG 5 cut(s) 488, 650, 974, 1167, 1316
FatI CATG 5 cut(s) 484, 646, 970, 1163, 1312
FauI CCCGC 1 cut(s) 644
FauNDI CATATG 1 cut(s) 1200
FbaI TGATCA 1 cut(s) 400
Fnu4HI GCNGC 5 cut(s) 328, 344, 369, 449, 1082
FokI GGATG 7 cut(s) 206, 447, 493, 569, 1135, 1223, 1266
Fsp4HI GCNGC 5 cut(s) 328, 344, 369, 449, 1082
FspBI CTAG 5 cut(s) 245, 927, 993, 1146, 1236
GluI GCNGC 5 cut(s) 328, 344, 369, 449, 1082
GsuI CTGGAG 2 cut(s) 903, 1209
HaeIII GGCC 3 cut(s) 159, 205, 1042
HapII CCGG 3 cut(s) 11, 508, 1321
HgaI GACGC 1 cut(s) 887
Hin1II CATG 5 cut(s) 488, 650, 974, 1167, 1316
HinfI GANTC 6 cut(s) 25, 52, 223, 251, 682, 1220
HpaII CCGG 3 cut(s) 11, 508, 1321
HphI GGTGA 1 cut(s) 410
Hpy166II GTNNAC 2 cut(s) 431, 657
Hpy188I TCNGA 8 cut(s) 66, 164, 603, 640, 696, 937, 1176, 1210
Hpy188III TCNNGA 2 cut(s) 478, 1036
Hpy8I GTNNAC 2 cut(s) 431, 657
HpyAV CCTTC 6 cut(s) 37, 98, 605, 745, 950, 1108
HpyCH4III ACNGT 3 cut(s) 22, 391, 1308
HpyCH4V TGCA 8 cut(s) 17, 186, 229, 371, 380, 448, 484, 1081
HpyF10VI GCNNNNNNNGC 1 cut(s) 377
HpyF3I CTNAG 5 cut(s) 27, 161, 293, 1175, 1300
Hsp92II CATG 5 cut(s) 488, 650, 974, 1167, 1316
Ksp22I TGATCA 1 cut(s) 400
Kzo9I GATC 6 cut(s) 34, 66, 73, 114, 400, 696
LmnI GCTCC 3 cut(s) 4, 876, 1054
Lsp1109I GCAGC 4 cut(s) 330, 355, 460, 1093
LweI GCATC 3 cut(s) 184, 471, 970
MabI ACCWGGT 2 cut(s) 564, 631
MaeI CTAG 5 cut(s) 245, 927, 993, 1146, 1236
MaeIII GTNAC 1 cut(s) 22
MalI GATC 6 cut(s) 36, 68, 75, 116, 402, 698
MboI GATC 6 cut(s) 34, 66, 73, 114, 400, 696
MboII GAAGA 3 cut(s) 1226, 1229, 1279
MflI RGATCY 1 cut(s) 66
MhlI GDGCHC 1 cut(s) 873
MluCI AATT 9 cut(s) 417, 498, 723, 782, 849, 1006, 1027, 1261, 1325
MlyI GAGTC 4 cut(s) 19, 61, 260, 1214
MmeI TCCRAC 3 cut(s) 559, 1188, 1248
Mph1103I ATGCAT 1 cut(s) 486
MseI TTAA 4 cut(s) 149, 420, 593, 1244
MslI CAYNNNNRTG 2 cut(s) 489, 975
MspA1I CMGCKG 1 cut(s) 343
MspCI CTTAAG 1 cut(s) 592
MspI CCGG 3 cut(s) 11, 508, 1321
MspR9I CCNGG 9 cut(s) 305, 336, 509, 566, 633, 1073, 1137, 1321, 1322
Mva1269I GAATGC 1 cut(s) 229
MvaI CCWGG 6 cut(s) 305, 336, 566, 633, 1073, 1137
MwoI GCNNNNNNNGC 1 cut(s) 377
NciI CCSGG 3 cut(s) 509, 1321, 1322
NdeI CATATG 1 cut(s) 1200
NdeII GATC 6 cut(s) 34, 66, 73, 114, 400, 696
NlaIII CATG 5 cut(s) 488, 650, 974, 1167, 1316
NlaIV GGNNCC 5 cut(s) 309, 630, 1056, 1252, 1272
NmuCI GTSAC 1 cut(s) 22
NsiI ATGCAT 1 cut(s) 486
NspI RCATGY 1 cut(s) 1167
PceI AGGCCT 2 cut(s) 159, 1042
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PctI GAATGC 1 cut(s) 229
PfeI GAWTC 2 cut(s) 223, 682
PflMI CCANNNNNTGG 3 cut(s) 317, 470, 881
PkrI GCNGC 5 cut(s) 329, 345, 370, 450, 1083
PleI GAGTC 4 cut(s) 19, 60, 259, 1214
PpsI GAGTC 4 cut(s) 19, 60, 259, 1214
PpuMI RGGWCCY 1 cut(s) 307
PshBI ATTAAT 2 cut(s) 420, 1244
PsiI TTATAA 1 cut(s) 1026
Psp5II RGGWCCY 1 cut(s) 307
Psp6I CCWGG 6 cut(s) 303, 334, 564, 631, 1071, 1135
PspGI CCWGG 6 cut(s) 303, 334, 564, 631, 1071, 1135
PspN4I GGNNCC 5 cut(s) 309, 630, 1056, 1252, 1272
PspPI GGNCC 2 cut(s) 307, 332
PspPPI RGGWCCY 1 cut(s) 307
PstI CTGCAG 2 cut(s) 373, 450
PstNI CAGNNNCTG 1 cut(s) 881
PsuI RGATCY 1 cut(s) 66
PvuII CAGCTG 1 cut(s) 343
RsaI GTAC 3 cut(s) 146, 656, 1310
RsaNI GTAC 3 cut(s) 145, 655, 1309
RseI CAYNNNNRTG 2 cut(s) 489, 975
SaqAI TTAA 4 cut(s) 149, 420, 593, 1244
SatI GCNGC 5 cut(s) 328, 344, 369, 449, 1082
Sau3AI GATC 6 cut(s) 34, 66, 73, 114, 400, 696
Sau96I GGNCC 2 cut(s) 307, 332
ScaI AGTACT 1 cut(s) 146
SchI GAGTC 4 cut(s) 19, 61, 260, 1214
ScrFI CCNGG 9 cut(s) 305, 336, 509, 566, 633, 1073, 1137, 1321, 1322
SduI GDGCHC 1 cut(s) 873
SexAI ACCWGGT 2 cut(s) 564, 631
SfaNI GCATC 3 cut(s) 184, 471, 970
SfcI CTRYAG 4 cut(s) 369, 446, 531, 1044
SinI GGWCC 2 cut(s) 307, 332
SmaI CCCGGG 1 cut(s) 1322
SmiMI CAYNNNNRTG 2 cut(s) 489, 975
SmlI CTYRAG 1 cut(s) 592
SmoI CTYRAG 1 cut(s) 592
Sse9I AATT 9 cut(s) 417, 498, 723, 782, 849, 1006, 1027, 1261, 1325
SseBI AGGCCT 2 cut(s) 159, 1042
SsiI CCGC 4 cut(s) 327, 330, 468, 651
SspMI CTAG 5 cut(s) 245, 927, 993, 1146, 1236
StuI AGGCCT 2 cut(s) 159, 1042
StyD4I CCNGG 9 cut(s) 303, 334, 507, 564, 631, 1071, 1135, 1319, 1320
StyI CCWWGG 1 cut(s) 206
TaaI ACNGT 3 cut(s) 22, 391, 1308
TaqI TCGA 2 cut(s) 117, 742
TasI AATT 9 cut(s) 417, 498, 723, 782, 849, 1006, 1027, 1261, 1325
TatI WGTACW 1 cut(s) 144
TauI GCSGC 1 cut(s) 330
TfiI GAWTC 2 cut(s) 223, 682
Tru1I TTAA 4 cut(s) 149, 420, 593, 1244
Tru9I TTAA 4 cut(s) 149, 420, 593, 1244
TscAI CASTG 3 cut(s) 27, 526, 1233
TseFI GTSAC 1 cut(s) 22
TseI GCWGC 4 cut(s) 343, 368, 448, 1081
Tsp45I GTSAC 1 cut(s) 22
TspGWI ACGGA 1 cut(s) 97
TspMI CCCGGG 1 cut(s) 1320
TspRI CASTG 3 cut(s) 27, 526, 1233
Van91I CCANNNNNTGG 3 cut(s) 317, 470, 881
Vha464I CTTAAG 1 cut(s) 592
VpaK11BI GGWCC 2 cut(s) 307, 332
VspI ATTAAT 2 cut(s) 420, 1244
XapI RAATTY 2 cut(s) 1006, 1325
XceI RCATGY 1 cut(s) 1167
XcmI CCANNNNNNNNNTGG 1 cut(s) 311
XmaI CCCGGG 1 cut(s) 1320
XspI CTAG 5 cut(s) 245, 927, 993, 1146, 1236
ZrmI AGTACT 1 cut(s) 146
Zsp2I ATGCAT 1 cut(s) 486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.