pycom17g03200

Protein farnesyltransferase subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
2092060 .. 2095513
3454 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g03200.11

Sequence Viewer

Length: 1335 bp
ATGGAGAGTCCGGTCGCCACCGTGACTCAGCGCGATCAGTGGATGGTGGAGAGTCAGGTCTTTGGGATCTACGGAATCTTCGGCAACCTCCCACCCAAAGCCCAATCCGTCATGATTGAGCTTCAGCGTGATAGTCACATAGCGTATTTAACCAGAGGCCTCAGAGGACTCCCTTCCTCCTTCTGCGTTTTGGATGCCAATCGGCCTTGGCTTTGTTACTGGATTCTGCACTCATTGGCTTTGCTAGAGGAGTCTGTTGACGATGTACTGGAACATAATGCCATTGACTTTCTAAGCCGTTGTCAGGACCCAGAGGGTGGATATGGTGGCGGACCTGGACAGGCAAGTATATTGGCCCCGATGCCACATCTTGCAACGACTTACGCTGCAGTTAATGCACTTATAACTCTCGGTGGTGAGGAGGCGCTTTCATCAATTAATAGAGGTAAAATTTACAAGTTTTTGCGGCAAATGAAACATCCAAGCGGAGGCTTCAGGATGCATGATGGTGGAGAAATTGATGTCCGGGCTTGCTACACTGCGGTTTCTGTAGCAAGCATTTTGAACATTTTGGATGATGAACTGGTTCAAAATGTTGGAAGCTTCATCTTAAGTTGTCAGACGTATGAAGGTGGTATTTCTGGGGAGCCTGGTGCTGAAGCCCATGGTGGGTACACTTTTTGTGGGGTAGCTACAATGGTTCTAATCAATCAGGTCAATCGTTTGGACTTGCCTGGACTAATTGATTGGTTGACATTTCGACAGGGGAAAGAGTGTGGATTTCAGGGGAGGACTAATAAATTGGTCGACGGTTGCTACTCCTTCTGGCAGGGAGGTGTTTTTCCAATATTACAAAGAGTACGTTCAACTATTGATGAACAACTCACGCTTCGGGATGATGGAGGGCAGTGTACCAAGGATGGCGCACAGACTTCTACAACATCTAATATATCTGAAGAGGGGATATTTTTTGAAGGCACTACATCACCAGGAGTGAATTTGAATGATATCGGCTATGATTTTCTCAAGAGGCCTGTAATATCGGAGCCACTTTTTCACAGCATCGCATTGCAACAATATATACTTTTATGCTCACAGGAGGGGGAGGGAGGAATGAAAGACAAACCCGGGAAATCGAGAGACTTTTACCACACATGCTACTGTCTAAGTGGTCTTTCTGTATGTCAACACATTTGGTCGAACGACGAAGACTCTCCGGTGTTGCCTAGGGCAGTCATGGGTCCCTATCCCAATTTGTTGGAACCAATTCATCCCCTCTTCAATGTTGTCCTAGAAAAATACCATGAAGCAAGGGAATTCTTTACAAGAGACTGA

Protein Analysis

445

Amino Acids

49.01

Weight (kDa)

5.03

Isoelectric Point (pI)

50.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 404
AccB7I CCANNNNNTGG 1 cut(s) 317
AccI GTMKAC 1 cut(s) 807
AccII CGCG 1 cut(s) 33
AciI CCGC 4 cut(s) 330, 466, 486, 542
AclWI GGATC 1 cut(s) 74
AcsI RAATTY 3 cut(s) 450, 997, 1316
AcuI CTGAAG 4 cut(s) 107, 478, 678, 975
AfaI GTAC 4 cut(s) 267, 674, 861, 913
AfiI CCNNNNNNNGG 4 cut(s) 304, 317, 488, 669
AflII CTTAAG 1 cut(s) 610
AgsI TTSAA 6 cut(s) 565, 590, 867, 974, 1003, 1282
AjnI CCWGG 4 cut(s) 334, 649, 733, 988
AluBI AGCT 3 cut(s) 121, 603, 692
AluI AGCT 3 cut(s) 121, 603, 692
Alw26I GTCTC 2 cut(s) 1134, 1323
AlwI GGATC 1 cut(s) 74
Ama87I CYCGRG 1 cut(s) 1127
AoxI GGCC 4 cut(s) 157, 203, 354, 1031
ApeKI GCWGC 1 cut(s) 386
ApoI RAATTY 3 cut(s) 450, 997, 1316
AseI ATTAAT 1 cut(s) 438
Asp700I GAANNNNTTC 2 cut(s) 585, 1266
AspA2I CCTAGG 1 cut(s) 1226
AspLEI GCGC 3 cut(s) 33, 427, 926
AspS9I GGNCC 4 cut(s) 307, 332, 355, 1241
AsuC2I CCSGG 3 cut(s) 527, 1128, 1129
AsuHPI GGTGA 2 cut(s) 428, 978
AvaI CYCGRG 1 cut(s) 1127
AvaII GGWCC 3 cut(s) 307, 332, 1241
AvrII CCTAGG 1 cut(s) 1226
BbsI GAAGAC 1 cut(s) 1215
BbvI GCAGC 1 cut(s) 373
BccI CCATC 4 cut(s) 37, 500, 893, 914
BceAI ACGGC 1 cut(s) 282
BciT130I CCWGG 4 cut(s) 336, 651, 735, 990
BcnI CCSGG 3 cut(s) 527, 1128, 1129
BcoDI GTCTC 2 cut(s) 1134, 1323
BfaI CTAG 3 cut(s) 245, 1227, 1292
BfmI CTRYAG 2 cut(s) 387, 549
BfoI RGCGCY 1 cut(s) 428
BfrI CTTAAG 1 cut(s) 610
BisI GCNGC 2 cut(s) 387, 467
BlnI CCTAGG 1 cut(s) 1226
BlsI GCNGC 2 cut(s) 388, 468
Bme1390I CCNGG 7 cut(s) 336, 527, 651, 735, 990, 1128, 1129
Bme18I GGWCC 3 cut(s) 307, 332, 1241
BmeT110I CYCGRG 1 cut(s) 1127
BmgT120I GGNCC 4 cut(s) 307, 332, 355, 1241
BmiI GGNNCC 7 cut(s) 309, 357, 648, 1047, 1242, 1243, 1263
BmrFI CCNGG 7 cut(s) 336, 527, 651, 735, 990, 1128, 1129
BmsI GCATC 4 cut(s) 184, 351, 489, 1071
BpiI GAAGAC 1 cut(s) 1215
BpuEI CTTGAG 1 cut(s) 1010
BpuMI CCSGG 3 cut(s) 527, 1128, 1129
BsaBI GATNNNNATC 1 cut(s) 198
BsaJI CCNNGG 5 cut(s) 206, 664, 915, 1127, 1226
BsaWI WCCGGW 2 cut(s) 10, 1216
Bsc4I CCNNNNNNNGG 4 cut(s) 304, 317, 488, 669
Bse1I ACTGG 3 cut(s) 224, 273, 588
Bse3DI GCAATG 1 cut(s) 1067
Bse8I GATNNNNATC 1 cut(s) 198
BseBI CCWGG 4 cut(s) 336, 651, 735, 990
BseDI CCNNGG 5 cut(s) 206, 664, 915, 1127, 1226
BseGI GGATG 8 cut(s) 48, 199, 478, 504, 580, 901, 925, 1270
BseJI GATNNNNATC 1 cut(s) 198
BseLI CCNNNNNNNGG 4 cut(s) 304, 317, 488, 669
BseMI GCAATG 1 cut(s) 1067
BseMII CTCAG 2 cut(s) 41, 175
BseNI ACTGG 3 cut(s) 224, 273, 588
BseRI GAGGAG 2 cut(s) 263, 434
BseXI GCAGC 1 cut(s) 373
BsgI GTGCAG 1 cut(s) 212
Bsh1236I CGCG 1 cut(s) 33
Bsh1285I CGRYCG 1 cut(s) 15
BshFI GGCC 4 cut(s) 159, 205, 356, 1033
BsiEI CGRYCG 1 cut(s) 15
BsiHKCI CYCGRG 1 cut(s) 1127
BsiSI CCGG 4 cut(s) 11, 526, 1128, 1217
BslFI GGGAC 1 cut(s) 1227
BslI CCNNNNNNNGG 4 cut(s) 304, 317, 488, 669
BsmAI GTCTC 2 cut(s) 1134, 1323
BsmFI GGGAC 1 cut(s) 1227
BsnI GGCC 4 cut(s) 159, 205, 356, 1033
BsoBI CYCGRG 1 cut(s) 1127
Bsp143I GATC 2 cut(s) 34, 66
Bsp19I CCATGG 1 cut(s) 664
BspACI CCGC 4 cut(s) 330, 466, 486, 542
BspANI GGCC 4 cut(s) 159, 205, 356, 1033
BspCNI CTCAG 2 cut(s) 40, 174
BspFNI CGCG 1 cut(s) 33
BspHI TCATGA 1 cut(s) 111
BspLI GGNNCC 7 cut(s) 309, 357, 648, 1047, 1242, 1243, 1263
BspMAI CTGCAG 1 cut(s) 391
BspPI GGATC 1 cut(s) 74
BspTI CTTAAG 1 cut(s) 610
BsrDI GCAATG 1 cut(s) 1067
BsrI ACTGG 3 cut(s) 224, 273, 588
BssECI CCNNGG 5 cut(s) 206, 664, 915, 1127, 1226
BssMI GATC 2 cut(s) 34, 66
BssT1I CCWWGG 4 cut(s) 206, 664, 915, 1226
Bst2UI CCWGG 4 cut(s) 336, 651, 735, 990
Bst4CI ACNGT 3 cut(s) 22, 812, 1163
Bst6I CTCTTC 2 cut(s) 951, 1283
BstAFI CTTAAG 1 cut(s) 610
BstAPI GCANNNNNTGC 1 cut(s) 395
BstC8I GCNNGC 2 cut(s) 532, 556
BstDEI CTNAG 4 cut(s) 27, 161, 293, 1166
BstDSI CCRYGG 1 cut(s) 664
BstF5I GGATG 8 cut(s) 48, 199, 478, 504, 580, 901, 925, 1270
BstFNI CGCG 1 cut(s) 33
BstH2I RGCGCY 1 cut(s) 428
BstHHI GCGC 3 cut(s) 33, 427, 926
BstKTI GATC 2 cut(s) 37, 69
BstMAI GTCTC 2 cut(s) 1134, 1323
BstMBI GATC 2 cut(s) 34, 66
BstMCI CGRYCG 1 cut(s) 15
BstMWI GCNNNNNNNGC 1 cut(s) 395
BstNI CCWGG 4 cut(s) 336, 651, 735, 990
BstNSI RCATGY 1 cut(s) 1158
BstSCI CCNGG 7 cut(s) 334, 525, 649, 733, 988, 1126, 1127
BstSFI CTRYAG 2 cut(s) 387, 549
BstUI CGCG 1 cut(s) 33
BstV1I GCAGC 1 cut(s) 373
BstV2I GAAGAC 1 cut(s) 1215
BstX2I RGATCY 1 cut(s) 66
BstXI CCANNNNNNTGG 1 cut(s) 1258
BstYI RGATCY 1 cut(s) 66
BsuRI GGCC 4 cut(s) 159, 205, 356, 1033
BtgI CCRYGG 1 cut(s) 664
BtgZI GCGATG 1 cut(s) 1048
BtsCI GGATG 8 cut(s) 48, 199, 478, 504, 580, 901, 925, 1270
BtsI GCAGTG 2 cut(s) 537, 914
BtsIMutI CAGTG 3 cut(s) 44, 537, 914
Cac8I GCNNGC 2 cut(s) 532, 556
CciI TCATGA 1 cut(s) 111
CfoI GCGC 3 cut(s) 33, 427, 926
Cfr13I GGNCC 4 cut(s) 307, 332, 355, 1241
Cfr9I CCCGGG 1 cut(s) 1127
Csp6I GTAC 4 cut(s) 266, 673, 860, 912
CviAII CATG 6 cut(s) 112, 503, 665, 1155, 1237, 1304
CviQI GTAC 4 cut(s) 266, 673, 860, 912
DdeI CTNAG 4 cut(s) 27, 161, 293, 1166
DpnI GATC 2 cut(s) 36, 68
DpnII GATC 2 cut(s) 34, 66
Eam1104I CTCTTC 2 cut(s) 951, 1283
EarI CTCTTC 2 cut(s) 951, 1283
EciI GGCGGA 1 cut(s) 345
Eco130I CCWWGG 4 cut(s) 206, 664, 915, 1226
Eco147I AGGCCT 2 cut(s) 159, 1033
Eco32I GATATC 1 cut(s) 1009
Eco47I GGWCC 3 cut(s) 307, 332, 1241
Eco57I CTGAAG 4 cut(s) 107, 478, 678, 975
Eco88I CYCGRG 1 cut(s) 1127
EcoO109I RGGNCCY 2 cut(s) 307, 1241
EcoRI GAATTC 1 cut(s) 1316
EcoRII CCWGG 4 cut(s) 334, 649, 733, 988
EcoRV GATATC 1 cut(s) 1009
EcoT14I CCWWGG 4 cut(s) 206, 664, 915, 1226
EcoT22I ATGCAT 1 cut(s) 504
ErhI CCWWGG 4 cut(s) 206, 664, 915, 1226
FaeI CATG 6 cut(s) 115, 506, 668, 1158, 1240, 1307
FaqI GGGAC 1 cut(s) 1227
FatI CATG 6 cut(s) 111, 502, 664, 1154, 1236, 1303
FblI GTMKAC 1 cut(s) 807
Fnu4HI GCNGC 2 cut(s) 387, 467
FokI GGATG 8 cut(s) 55, 206, 465, 511, 587, 908, 932, 1257
Fsp4HI GCNGC 2 cut(s) 387, 467
FspBI CTAG 3 cut(s) 245, 1227, 1292
GlaI GCGC 3 cut(s) 32, 426, 925
GluI GCNGC 2 cut(s) 387, 467
HaeII RGCGCY 1 cut(s) 428
HaeIII GGCC 4 cut(s) 159, 205, 356, 1033
HapII CCGG 4 cut(s) 11, 526, 1128, 1217
HhaI GCGC 3 cut(s) 33, 427, 926
Hin1II CATG 6 cut(s) 115, 506, 668, 1158, 1240, 1307
Hin6I GCGC 3 cut(s) 31, 425, 924
HinP1I GCGC 3 cut(s) 31, 425, 924
HincII GTYRAC 4 cut(s) 259, 753, 808, 1187
HindII GTYRAC 4 cut(s) 259, 753, 808, 1187
HindIII AAGCTT 1 cut(s) 601
HinfI GANTC 8 cut(s) 7, 25, 52, 75, 168, 223, 251, 1211
HpaII CCGG 4 cut(s) 11, 526, 1128, 1217
HphI GGTGA 2 cut(s) 428, 978
Hpy166II GTNNAC 6 cut(s) 259, 675, 753, 808, 912, 1187
Hpy188I TCNGA 4 cut(s) 164, 621, 955, 1045
Hpy188III TCNNGA 6 cut(s) 112, 305, 496, 893, 1027, 1137
Hpy8I GTNNAC 6 cut(s) 259, 675, 753, 808, 912, 1187
Hpy99I CGWCG 2 cut(s) 812, 1208
HpyAV CCTTC 5 cut(s) 183, 190, 623, 832, 968
HpyCH4III ACNGT 3 cut(s) 22, 812, 1163
HpyCH4IV ACGT 2 cut(s) 623, 862
HpyCH4V TGCA 6 cut(s) 229, 374, 389, 398, 502, 1072
HpyF10VI GCNNNNNNNGC 1 cut(s) 395
HpyF3I CTNAG 4 cut(s) 27, 161, 293, 1166
HpySE526I ACGT 2 cut(s) 623, 862
Hsp92II CATG 6 cut(s) 115, 506, 668, 1158, 1240, 1307
HspAI GCGC 3 cut(s) 31, 425, 924
KflI GGGWCCC 1 cut(s) 1241
Kzo9I GATC 2 cut(s) 34, 66
LmnI GCTCC 2 cut(s) 646, 1045
Lsp1109I GCAGC 1 cut(s) 373
LweI GCATC 4 cut(s) 184, 351, 489, 1071
MaeI CTAG 3 cut(s) 245, 1227, 1292
MaeII ACGT 2 cut(s) 623, 862
MaeIII GTNAC 3 cut(s) 22, 134, 215
MalI GATC 2 cut(s) 36, 68
MboI GATC 2 cut(s) 34, 66
MboII GAAGA 4 cut(s) 70, 968, 1220, 1270
MflI RGATCY 1 cut(s) 66
MluCI AATT 9 cut(s) 435, 450, 516, 741, 800, 997, 1252, 1266, 1316
MlyI GAGTC 6 cut(s) 16, 19, 61, 162, 260, 1205
MmeI TCCRAC 2 cut(s) 577, 1239
Mph1103I ATGCAT 1 cut(s) 504
MroXI GAANNNNTTC 2 cut(s) 585, 1266
MseI TTAA 4 cut(s) 149, 393, 438, 611
MslI CAYNNNNRTG 1 cut(s) 507
MspCI CTTAAG 1 cut(s) 610
MspI CCGG 4 cut(s) 11, 526, 1128, 1217
MspR9I CCNGG 7 cut(s) 336, 527, 651, 735, 990, 1128, 1129
MvaI CCWGG 4 cut(s) 336, 651, 735, 990
MvnI CGCG 1 cut(s) 33
MwoI GCNNNNNNNGC 1 cut(s) 395
NciI CCSGG 3 cut(s) 527, 1128, 1129
NcoI CCATGG 1 cut(s) 664
NdeII GATC 2 cut(s) 34, 66
NlaIII CATG 6 cut(s) 115, 506, 668, 1158, 1240, 1307
NlaIV GGNNCC 7 cut(s) 309, 357, 648, 1047, 1242, 1243, 1263
NmuCI GTSAC 2 cut(s) 22, 134
NsiI ATGCAT 1 cut(s) 504
NspI RCATGY 1 cut(s) 1158
PagI TCATGA 1 cut(s) 111
PceI AGGCCT 2 cut(s) 159, 1033
PdmI GAANNNNTTC 2 cut(s) 585, 1266
PfeI GAWTC 2 cut(s) 75, 223
PflMI CCANNNNNTGG 1 cut(s) 317
PkrI GCNGC 2 cut(s) 388, 468
PleI GAGTC 6 cut(s) 15, 19, 60, 162, 259, 1205
PpsI GAGTC 6 cut(s) 15, 19, 60, 162, 259, 1205
PpuMI RGGWCCY 2 cut(s) 307, 1241
PshBI ATTAAT 1 cut(s) 438
PsiI TTATAA 1 cut(s) 404
Psp5II RGGWCCY 2 cut(s) 307, 1241
Psp6I CCWGG 4 cut(s) 334, 649, 733, 988
PspGI CCWGG 4 cut(s) 334, 649, 733, 988
PspN4I GGNNCC 7 cut(s) 309, 357, 648, 1047, 1242, 1243, 1263
PspPI GGNCC 4 cut(s) 307, 332, 355, 1241
PspPPI RGGWCCY 2 cut(s) 307, 1241
PstI CTGCAG 1 cut(s) 391
PsuI RGATCY 1 cut(s) 66
RsaI GTAC 4 cut(s) 267, 674, 861, 913
RsaNI GTAC 4 cut(s) 266, 673, 860, 912
RseI CAYNNNNRTG 1 cut(s) 507
SalI GTCGAC 1 cut(s) 806
SaqAI TTAA 4 cut(s) 149, 393, 438, 611
SatI GCNGC 2 cut(s) 387, 467
Sau3AI GATC 2 cut(s) 34, 66
Sau96I GGNCC 4 cut(s) 307, 332, 355, 1241
SchI GAGTC 6 cut(s) 16, 19, 61, 162, 260, 1205
ScrFI CCNGG 7 cut(s) 336, 527, 651, 735, 990, 1128, 1129
SfaNI GCATC 4 cut(s) 184, 351, 489, 1071
SfcI CTRYAG 2 cut(s) 387, 549
SinI GGWCC 3 cut(s) 307, 332, 1241
SmaI CCCGGG 1 cut(s) 1129
SmiMI CAYNNNNRTG 1 cut(s) 507
SmlI CTYRAG 2 cut(s) 610, 1025
SmoI CTYRAG 2 cut(s) 610, 1025
Sse9I AATT 9 cut(s) 435, 450, 516, 741, 800, 997, 1252, 1266, 1316
SseBI AGGCCT 2 cut(s) 159, 1033
SsiI CCGC 4 cut(s) 330, 466, 486, 542
SspI AATATT 1 cut(s) 849
SspMI CTAG 3 cut(s) 245, 1227, 1292
StuI AGGCCT 2 cut(s) 159, 1033
StyD4I CCNGG 7 cut(s) 334, 525, 649, 733, 988, 1126, 1127
StyI CCWWGG 4 cut(s) 206, 664, 915, 1226
TaaI ACNGT 3 cut(s) 22, 812, 1163
TaiI ACGT 2 cut(s) 626, 865
TaqI TCGA 4 cut(s) 760, 807, 1136, 1199
TasI AATT 9 cut(s) 435, 450, 516, 741, 800, 997, 1252, 1266, 1316
TatI WGTACW 1 cut(s) 265
TauI GCSGC 1 cut(s) 469
TfiI GAWTC 2 cut(s) 75, 223
Tru1I TTAA 4 cut(s) 149, 393, 438, 611
Tru9I TTAA 4 cut(s) 149, 393, 438, 611
TscAI CASTG 3 cut(s) 44, 544, 914
TseFI GTSAC 2 cut(s) 22, 134
TseI GCWGC 1 cut(s) 386
Tsp45I GTSAC 2 cut(s) 22, 134
TspDTI ATGAA 9 cut(s) 420, 488, 594, 595, 642, 891, 1130, 1259, 1320
TspGWI ACGGA 2 cut(s) 87, 97
TspMI CCCGGG 1 cut(s) 1127
TspRI CASTG 3 cut(s) 44, 544, 914
Van91I CCANNNNNTGG 1 cut(s) 317
Vha464I CTTAAG 1 cut(s) 610
VpaK11BI GGWCC 3 cut(s) 307, 332, 1241
VspI ATTAAT 1 cut(s) 438
XapI RAATTY 3 cut(s) 450, 997, 1316
XceI RCATGY 1 cut(s) 1158
XmaI CCCGGG 1 cut(s) 1127
XmaJI CCTAGG 1 cut(s) 1226
XmiI GTMKAC 1 cut(s) 807
XmnI GAANNNNTTC 2 cut(s) 585, 1266
XspI CTAG 3 cut(s) 245, 1227, 1292
Zsp2I ATGCAT 1 cut(s) 504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.