Prupe.3G289200_v2.0.a1

High affinity nitrate transporter

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
26009485 .. 26011807
2323 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G289200.1

Sequence Viewer

Length: 1419 bp
ATGGAAGCTGAAGCTGAAACTGAAGCTAATCCTGAACAAGTAGATCATCTGTTTTCATTACCAGTAGATGCTGATCAAAAGGCCACAGAGTTTAGGCTATTCTCAATTGCGCCACCGCACATGCTCGCCTTCCACCTTGCATGGTTCTCTCTTTTCTCCAACTTCTTCTCCACCTTCTCCATCCCTCCCCTCCTCGCCGTCATCCAAGACGACCTCAATCTCACGGACACGGACACCGGCCGAGCCGGCACGGCCGCCTTCCTCGGCTCCATCTTCTCCCGCATTGCCATGGGCCCCATCTGCGACCTCGTGGGCCCGCGCATCGCCATCGCCACCCTCTCCCTCATCACCGCCCCCGTCATCCTCTCCACCTCCCTCGTCTCCTCCCCGCACTCCTTCATTGCCCTCCGCTTCCTCACCGGCTTTTCGCTCGCCAACTTCGTCGCCAACCAGTTCTGGATGAGCTGCATGTTCTCCGGCTGCGTCGTCGGCCTCGCCAACGGCTTCTCCGCCGGCTGGGCCAACATGGGATCCGGCGTCACCCAGTTGGTCATGCCCCTCATTTATACTCTCATCATGTCCTTCAACGTACCGTCCTCCACAGCTTGGAGGCTTGCATTTATTGTGCCCGCAGTTTTCCAAGCTGTCACAGCCTTATTGGTCCTGGCTTTCGGGCAAGACGTACCTTCTGGGAGCTACAGAAGCTTGAAGAAGGTTAATATTGGCAAAGAGAGCTTGTGCAAAGTTTTCTGTCACGGGGCCAAGAATTACAGAGCTTGGATTTTGGCCTTGACTTATGGATTCTGTTTTGGGGTGGAGATGACGACTGATAATATAATAGCTCAGTATTTCTACGACAGGTTTGATGTGAATATTCAAGTGGCGGGGATCATAGCGGGGAGCTTTGGGATGGCGAATTTCTTTTCGAGGCCGAGCGGAGGGTTGGTTTCTGATAGGATGGGGAGAAGGTTTGGGATGAGAGGGAGATTGTGGGGGTTGTGGGTGACGCAGACAGTGGCTGGGTTGTTGTGCTTGTTACTCGGGCGAGTCAACTCGCTCTGGGGATCCATACTTGTCATGTGTGCCTTCTCTGTCTTTGTTCAAGCAGCCTCGGGCCTAACGTTTGGTGTGGTTCCCTTTGTGTCCAAAAGGTCACTAGGTGTGGTATCGGGGATTACAGGCAGTGGAGGGACTGTAGGGGCGGTGATAACCCAGCTGTTGCTGTTCTCAGGCTCTAAATTCTCCAAGCAGACGGGCATTTCTCTGATGGGTATCATGATGATTGTGTGCACTCTCCCAATCTCCCTTATCTACTTTCCTCAGTCGGGTGGAATGTTCTGTGGCCCTTCCTATGGCTCTGATGATCGTCTCAAGGGGCCAGAAACTGATGAAACAAACCATTATCGCTTGCTCCAATAA

Protein Analysis

473

Amino Acids

50.9

Weight (kDa)

8.31

Isoelectric Point (pI)

34.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012097)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 606
AccBSI CCGCTC 1 cut(s) 936
AccII CGCG 1 cut(s) 319
AclI AACGTT 1 cut(s) 1121
AclWI GGATC 5 cut(s) 525, 538, 896, 1059, 1072
AcoI YGGCCR 2 cut(s) 238, 252
AcsI RAATTY 2 cut(s) 916, 1238
AcuI CTGAAG 2 cut(s) 30, 42
AcyI GRCGYC 1 cut(s) 537
AdeI CACNNNGTG 1 cut(s) 1160
AfaI GTAC 2 cut(s) 591, 684
AfiI CCNNNNNNNGG 5 cut(s) 516, 606, 938, 1325, 1352
AgsI TTSAA 4 cut(s) 586, 709, 878, 1103
AjnI CCWGG 1 cut(s) 663
Alw21I GWGCWC 1 cut(s) 1292
Alw26I GTCTC 2 cut(s) 385, 1373
Alw44I GTGCAC 1 cut(s) 1288
AlwI GGATC 5 cut(s) 525, 538, 896, 1059, 1072
AlwNI CAGNNNCTG 2 cut(s) 1019, 1385
Ama87I CYCGRG 2 cut(s) 1040, 1111
ApaI GGGCCC 2 cut(s) 296, 317
ApaLI GTGCAC 1 cut(s) 1288
ApeKI GCWGC 3 cut(s) 465, 480, 1106
ApoI RAATTY 2 cut(s) 916, 1238
AspLEI GCGC 2 cut(s) 112, 321
AsuHPI GGTGA 5 cut(s) 340, 409, 532, 1015, 1216
AvaI CYCGRG 2 cut(s) 1040, 1111
AvaII GGWCC 1 cut(s) 661
BaeGI GKGCMC 4 cut(s) 296, 317, 630, 1292
BamHI GGATCC 2 cut(s) 530, 1064
BanII GRGCYC 2 cut(s) 296, 317
BauI CACGAG 1 cut(s) 308
Bbv12I GWGCWC 1 cut(s) 1292
BbvI GCAGC 3 cut(s) 452, 467, 1118
BccI CCATC 7 cut(s) 188, 278, 305, 335, 904, 952, 1261
BceAI ACGGC 3 cut(s) 182, 267, 517
BcgI CGANNNNNNTGC 2 cut(s) 310, 344
BciT130I CCWGG 1 cut(s) 665
BclI TGATCA 1 cut(s) 73
BcoDI GTCTC 2 cut(s) 385, 1373
BfaI CTAG 1 cut(s) 1157
BfmI CTRYAG 2 cut(s) 697, 1194
BglI GCCNNNNNGGC 3 cut(s) 246, 251, 518
BisI GCNGC 4 cut(s) 255, 466, 481, 1107
BlsI GCNGC 4 cut(s) 256, 467, 482, 1108
Bme1390I CCNGG 1 cut(s) 665
Bme18I GGWCC 1 cut(s) 661
BmeT110I CYCGRG 2 cut(s) 1040, 1111
BmiI GGNNCC 9 cut(s) 268, 294, 295, 315, 532, 760, 1066, 1134, 1377
BmrFI CCNGG 1 cut(s) 665
BmrI ACTGGG 1 cut(s) 538
BmsI GCATC 2 cut(s) 58, 330
BmuI ACTGGG 1 cut(s) 538
BpuEI CTTGAG 1 cut(s) 1355
BsaBI GATNNNNATC 2 cut(s) 72, 1271
BsaHI GRCGYC 1 cut(s) 537
BsaJI CCNNGG 3 cut(s) 262, 288, 1110
BsaXI ACNNNNNCTCC 8 cut(s) 152, 182, 491, 521, 930, 960, 1179, 1209
Bsc4I CCNNNNNNNGG 5 cut(s) 516, 606, 938, 1325, 1352
Bse118I RCCGGY 4 cut(s) 236, 245, 419, 512
Bse1I ACTGG 3 cut(s) 62, 451, 544
Bse3DI GCAATG 2 cut(s) 282, 399
Bse8I GATNNNNATC 2 cut(s) 72, 1271
BseBI CCWGG 1 cut(s) 665
BseDI CCNNGG 3 cut(s) 262, 288, 1110
BseGI GGATG 7 cut(s) 180, 201, 360, 465, 915, 963, 981
BseJI GATNNNNATC 2 cut(s) 72, 1271
BseLI CCNNNNNNNGG 5 cut(s) 516, 606, 938, 1325, 1352
BseMI GCAATG 2 cut(s) 282, 399
BseMII CTCAG 3 cut(s) 857, 1242, 1334
BseNI ACTGG 3 cut(s) 62, 451, 544
BseRI GAGGAG 2 cut(s) 182, 373
BseSI GKGCMC 4 cut(s) 296, 317, 630, 1292
BseX3I CGGCCG 2 cut(s) 238, 252
BseXI GCAGC 3 cut(s) 452, 467, 1118
BseYI CCCAGC 3 cut(s) 516, 1019, 1212
Bsh1236I CGCG 1 cut(s) 319
Bsh1285I CGRYCG 2 cut(s) 241, 255
BsiEI CGRYCG 2 cut(s) 241, 255
BsiHKAI GWGCWC 1 cut(s) 1292
BsiHKCI CYCGRG 2 cut(s) 1040, 1111
BsiSI CCGG 6 cut(s) 237, 246, 420, 477, 513, 534
BslFI GGGAC 1 cut(s) 1204
BslI CCNNNNNNNGG 5 cut(s) 516, 606, 938, 1325, 1352
BsmAI GTCTC 2 cut(s) 385, 1373
BsmBI CGTCTC 2 cut(s) 385, 1373
BsmFI GGGAC 1 cut(s) 1204
BsoBI CYCGRG 2 cut(s) 1040, 1111
Bsp120I GGGCCC 2 cut(s) 292, 313
Bsp1286I GDGCHC 4 cut(s) 296, 317, 630, 1292
Bsp143I GATC 6 cut(s) 43, 73, 530, 888, 1064, 1363
Bsp19I CCATGG 1 cut(s) 288
BspCNI CTCAG 3 cut(s) 856, 1241, 1333
BspFNI CGCG 1 cut(s) 319
BspHI TCATGA 1 cut(s) 1275
BspLI GGNNCC 9 cut(s) 268, 294, 295, 315, 532, 760, 1066, 1134, 1377
BspPI GGATC 5 cut(s) 525, 538, 896, 1059, 1072
BsrBI CCGCTC 1 cut(s) 936
BsrDI GCAATG 2 cut(s) 282, 399
BsrFI RCCGGY 4 cut(s) 236, 245, 419, 512
BsrI ACTGG 3 cut(s) 62, 451, 544
BssAI RCCGGY 4 cut(s) 236, 245, 419, 512
BssECI CCNNGG 3 cut(s) 262, 288, 1110
BssMI GATC 6 cut(s) 43, 73, 530, 888, 1064, 1363
BssNI GRCGYC 1 cut(s) 537
BssSI CACGAG 1 cut(s) 308
BssT1I CCWWGG 1 cut(s) 288
Bst2BI CACGAG 1 cut(s) 308
Bst2UI CCWGG 1 cut(s) 665
Bst4CI ACNGT 3 cut(s) 594, 1015, 1195
BstACI GRCGYC 1 cut(s) 537
BstC8I GCNNGC 8 cut(s) 126, 247, 317, 432, 514, 615, 630, 1409
BstDEI CTNAG 3 cut(s) 843, 1228, 1320
BstDSI CCRYGG 1 cut(s) 288
BstF5I GGATG 7 cut(s) 180, 201, 360, 465, 915, 963, 981
BstFNI CGCG 1 cut(s) 319
BstHHI GCGC 2 cut(s) 112, 321
BstKTI GATC 6 cut(s) 46, 76, 533, 891, 1067, 1366
BstMAI GTCTC 2 cut(s) 385, 1373
BstMBI GATC 6 cut(s) 43, 73, 530, 888, 1064, 1363
BstMCI CGRYCG 2 cut(s) 241, 255
BstMWI GCNNNNNNNGC 8 cut(s) 246, 251, 300, 489, 518, 650, 702, 732
BstNI CCWGG 1 cut(s) 665
BstNSI RCATGY 2 cut(s) 124, 472
BstSCI CCNGG 1 cut(s) 663
BstSFI CTRYAG 2 cut(s) 697, 1194
BstSLI GKGCMC 4 cut(s) 296, 317, 630, 1292
BstUI CGCG 1 cut(s) 319
BstV1I GCAGC 3 cut(s) 452, 467, 1118
BstX2I RGATCY 2 cut(s) 530, 1064
BstYI RGATCY 2 cut(s) 530, 1064
BstZI CGGCCG 2 cut(s) 238, 252
BtgI CCRYGG 1 cut(s) 288
BtgZI GCGATG 2 cut(s) 307, 313
BtsCI GGATG 7 cut(s) 180, 201, 360, 465, 915, 963, 981
BtsI GCAGTG 1 cut(s) 1189
BtsIMutI CAGTG 2 cut(s) 1020, 1189
Cac8I GCNNGC 8 cut(s) 126, 247, 317, 432, 514, 615, 630, 1409
CaiI CAGNNNCTG 2 cut(s) 1019, 1385
CciI TCATGA 1 cut(s) 1275
CfoI GCGC 2 cut(s) 112, 321
Cfr10I RCCGGY 4 cut(s) 236, 245, 419, 512
CseI GACGC 3 cut(s) 472, 526, 1015
Csp6I GTAC 2 cut(s) 590, 683
CviAII CATG 9 cut(s) 121, 141, 289, 469, 526, 553, 577, 1078, 1276
CviQI GTAC 2 cut(s) 590, 683
DdeI CTNAG 3 cut(s) 843, 1228, 1320
DpnI GATC 6 cut(s) 45, 75, 532, 890, 1066, 1365
DpnII GATC 6 cut(s) 43, 73, 530, 888, 1064, 1363
DraIII CACNNNGTG 1 cut(s) 1160
EaeI YGGCCR 2 cut(s) 238, 252
EagI CGGCCG 2 cut(s) 238, 252
EciI GGCGGA 1 cut(s) 499
EclXI CGGCCG 2 cut(s) 238, 252
Eco130I CCWWGG 1 cut(s) 288
Eco24I GRGCYC 2 cut(s) 296, 317
Eco47I GGWCC 1 cut(s) 661
Eco52I CGGCCG 2 cut(s) 238, 252
Eco57I CTGAAG 2 cut(s) 30, 42
Eco88I CYCGRG 2 cut(s) 1040, 1111
EcoO109I RGGNCCY 1 cut(s) 293
EcoRII CCWGG 1 cut(s) 663
EcoT14I CCWWGG 1 cut(s) 288
EcoT38I GRGCYC 2 cut(s) 296, 317
ErhI CCWWGG 1 cut(s) 288
Esp3I CGTCTC 2 cut(s) 385, 1373
FaeI CATG 9 cut(s) 124, 144, 292, 472, 529, 556, 580, 1081, 1279
FaqI GGGAC 1 cut(s) 1204
FatI CATG 9 cut(s) 120, 140, 288, 468, 525, 552, 576, 1077, 1275
FauI CCCGC 6 cut(s) 287, 324, 396, 637, 877, 889
FbaI TGATCA 1 cut(s) 73
Fnu4HI GCNGC 4 cut(s) 255, 466, 481, 1107
FokI GGATG 7 cut(s) 167, 188, 347, 472, 922, 970, 988
FriOI GRGCYC 2 cut(s) 296, 317
Fsp4HI GCNGC 4 cut(s) 255, 466, 481, 1107
FspBI CTAG 1 cut(s) 1157
GlaI GCGC 2 cut(s) 111, 320
GluI GCNGC 4 cut(s) 255, 466, 481, 1107
GsaI CCCAGC 3 cut(s) 520, 1023, 1216
HapII CCGG 6 cut(s) 237, 246, 420, 477, 513, 534
HgaI GACGC 3 cut(s) 472, 526, 1015
HhaI GCGC 2 cut(s) 112, 321
Hin1I GRCGYC 1 cut(s) 537
Hin1II CATG 9 cut(s) 124, 144, 292, 472, 529, 556, 580, 1081, 1279
Hin6I GCGC 2 cut(s) 110, 319
HinP1I GCGC 2 cut(s) 110, 319
HincII GTYRAC 1 cut(s) 1051
HindII GTYRAC 1 cut(s) 1051
HindIII AAGCTT 1 cut(s) 703
HinfI GANTC 2 cut(s) 801, 1047
HpaII CCGG 6 cut(s) 237, 246, 420, 477, 513, 534
HphI GGTGA 5 cut(s) 340, 409, 532, 1015, 1216
Hpy166II GTNNAC 2 cut(s) 1051, 1290
Hpy188I TCNGA 3 cut(s) 952, 1266, 1360
Hpy188III TCNNGA 3 cut(s) 32, 457, 1276
Hpy8I GTNNAC 2 cut(s) 1051, 1290
Hpy99I CGWCG 3 cut(s) 446, 488, 491
HpyCH4III ACNGT 3 cut(s) 594, 1015, 1195
HpyCH4IV ACGT 3 cut(s) 588, 681, 1121
HpyCH4V TGCA 5 cut(s) 140, 468, 617, 741, 1290
HpyF10VI GCNNNNNNNGC 8 cut(s) 246, 251, 300, 489, 518, 650, 702, 732
HpyF3I CTNAG 3 cut(s) 843, 1228, 1320
HpySE526I ACGT 3 cut(s) 588, 681, 1121
Hsp92I GRCGYC 1 cut(s) 537
Hsp92II CATG 9 cut(s) 124, 144, 292, 472, 529, 556, 580, 1081, 1279
HspAI GCGC 2 cut(s) 110, 319
KroI GCCGGC 2 cut(s) 245, 512
KroNI GCCGGC 2 cut(s) 247, 514
Ksp22I TGATCA 1 cut(s) 73
Kzo9I GATC 6 cut(s) 43, 73, 530, 888, 1064, 1363
LmnI GCTCC 4 cut(s) 272, 693, 900, 1416
Lsp1109I GCAGC 3 cut(s) 452, 467, 1118
LweI GCATC 2 cut(s) 58, 330
MaeI CTAG 1 cut(s) 1157
MaeII ACGT 3 cut(s) 588, 681, 1121
MaeIII GTNAC 6 cut(s) 538, 646, 752, 1003, 1035, 1152
MalI GATC 6 cut(s) 45, 75, 532, 890, 1066, 1365
MbiI CCGCTC 1 cut(s) 936
MboI GATC 6 cut(s) 43, 73, 530, 888, 1064, 1363
MboII GAAGA 3 cut(s) 157, 265, 721
MfeI CAATTG 1 cut(s) 105
MflI RGATCY 2 cut(s) 530, 1064
MhlI GDGCHC 4 cut(s) 296, 317, 630, 1292
MluCI AATT 4 cut(s) 105, 766, 916, 1238
MlyI GAGTC 1 cut(s) 1056
MmeI TCCRAC 1 cut(s) 183
MroNI GCCGGC 2 cut(s) 245, 512
MseI TTAA 1 cut(s) 717
MslI CAYNNNNRTG 1 cut(s) 287
MspA1I CMGCKG 1 cut(s) 1216
MspI CCGG 6 cut(s) 237, 246, 420, 477, 513, 534
MspR9I CCNGG 1 cut(s) 665
MunI CAATTG 1 cut(s) 105
MvaI CCWGG 1 cut(s) 665
MvnI CGCG 1 cut(s) 319
MwoI GCNNNNNNNGC 8 cut(s) 246, 251, 300, 489, 518, 650, 702, 732
NaeI GCCGGC 2 cut(s) 247, 514
NcoI CCATGG 1 cut(s) 288
NdeII GATC 6 cut(s) 43, 73, 530, 888, 1064, 1363
NgoMIV GCCGGC 2 cut(s) 245, 512
NlaIII CATG 9 cut(s) 124, 144, 292, 472, 529, 556, 580, 1081, 1279
NlaIV GGNNCC 9 cut(s) 268, 294, 295, 315, 532, 760, 1066, 1134, 1377
NmeAIII GCCGAG 3 cut(s) 243, 266, 957
NmuCI GTSAC 5 cut(s) 538, 646, 752, 1003, 1152
NspI RCATGY 2 cut(s) 124, 472
PagI TCATGA 1 cut(s) 1275
PcsI WCGNNNNNNNCGW 3 cut(s) 438, 678, 1118
PdiI GCCGGC 2 cut(s) 247, 514
PfeI GAWTC 1 cut(s) 801
PflMI CCANNNNNTGG 1 cut(s) 606
PkrI GCNGC 4 cut(s) 256, 467, 482, 1108
PleI GAGTC 1 cut(s) 1055
PpsI GAGTC 1 cut(s) 1055
Psp1406I AACGTT 1 cut(s) 1121
Psp6I CCWGG 1 cut(s) 663
PspFI CCCAGC 3 cut(s) 516, 1019, 1212
PspGI CCWGG 1 cut(s) 663
PspN4I GGNNCC 9 cut(s) 268, 294, 295, 315, 532, 760, 1066, 1134, 1377
PspOMI GGGCCC 2 cut(s) 292, 313
PstNI CAGNNNCTG 2 cut(s) 1019, 1385
PsuI RGATCY 2 cut(s) 530, 1064
PvuII CAGCTG 1 cut(s) 1216
RsaI GTAC 2 cut(s) 591, 684
RsaNI GTAC 2 cut(s) 590, 683
RseI CAYNNNNRTG 1 cut(s) 287
SaqAI TTAA 1 cut(s) 717
SatI GCNGC 4 cut(s) 255, 466, 481, 1107
Sau3AI GATC 6 cut(s) 43, 73, 530, 888, 1064, 1363
SchI GAGTC 1 cut(s) 1056
ScrFI CCNGG 1 cut(s) 665
SduI GDGCHC 4 cut(s) 296, 317, 630, 1292
SfaNI GCATC 2 cut(s) 58, 330
SfcI CTRYAG 2 cut(s) 697, 1194
SinI GGWCC 1 cut(s) 661
SmiMI CAYNNNNRTG 1 cut(s) 287
SmlI CTYRAG 1 cut(s) 1370
SmoI CTYRAG 1 cut(s) 1370
Sse9I AATT 4 cut(s) 105, 766, 916, 1238
SspI AATATT 2 cut(s) 721, 874
SspMI CTAG 1 cut(s) 1157
StyD4I CCNGG 1 cut(s) 663
StyI CCWWGG 1 cut(s) 288
TaaI ACNGT 3 cut(s) 594, 1015, 1195
TaiI ACGT 3 cut(s) 591, 684, 1124
TaqI TCGA 1 cut(s) 926
TasI AATT 4 cut(s) 105, 766, 916, 1238
TauI GCSGC 1 cut(s) 257
TfiI GAWTC 1 cut(s) 801
Tru1I TTAA 1 cut(s) 717
Tru9I TTAA 1 cut(s) 717
TscAI CASTG 2 cut(s) 1020, 1189
TseFI GTSAC 5 cut(s) 538, 646, 752, 1003, 1152
TseI GCWGC 3 cut(s) 465, 480, 1106
Tsp45I GTSAC 5 cut(s) 538, 646, 752, 1003, 1152
TspDTI ATGAA 3 cut(s) 45, 388, 1404
TspGWI ACGGA 2 cut(s) 239, 245
TspRI CASTG 2 cut(s) 1020, 1189
Van91I CCANNNNNTGG 1 cut(s) 606
VneI GTGCAC 1 cut(s) 1288
VpaK11BI GGWCC 1 cut(s) 661
XapI RAATTY 2 cut(s) 916, 1238
XceI RCATGY 2 cut(s) 124, 472
XspI CTAG 1 cut(s) 1157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.