Prupe.3G297000_v2.0.a1

membrane protein At3g27390-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
26373564 .. 26377957
4394 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G297000.1

Sequence Viewer

Length: 1773 bp
ATGGAACCCCCAAAGGGGGTGTTGGCTTCTTTGTGGAACTTCATCTGTTTTCTACCTTACTTCATTGGCCTTCTCCTTCTTGGCAACTTTAAAGGTATTCTGTTCTGCCCATTAATTTGCCTTATCATGACAATTGGAAACTCGGCTATCATATTGGGTCTTTGGCCGGTACACTTTCTCTGGACTTATTATTGCATGTTTAGAGCTAAACGATATGGGCCAGCTCTGAAGATTGTTGTCTGCATATTTGTACTCCCCGTCCAATTGATCTTGTGGCCAGTGGTTGGAATCGTTGGAAGTATTGTGGGTGGAGCAGCATATGGCTTTCTTTCACCAGTAATGGAAACTTTTCAAGCTGTTGGAGAAGGGAAGACCAATCAATTGTACCACTGCTTTTACGATGGAACTTGGAGCACCGTCCAAGGGTGCTTCACTGTTGTAAGGGATTTTGGGGATGTTTGTTACCACACATACTTCTCGGTTATGGATGACCTGAGAGAACAAGGTCCTCCAGATGCAAAATATTATGAGATCCGGGTGCTATATCTTCCTGGGGCTGTTATAATATCAGTCCTTGGTTTCATGGTTGATATGCCCGTGATCTCATTGATTGCCCTGTGCAAATCCCCATACATGCTATTCAAGGGGTGGCATCGTTTGTTTCATGACCTTATAGGTCGGGAGGGCCCTTTCTTGGAAACAATATGTGTTCCATTTGCAGGTCTTGCTATCCTACTCTGGCCGTTGGCTGTTGTAGGGGCAGTGCTGGGATCAATGGTGGCCAGTATCTTTCTTGGTGCTTTTGCTGGAGTGGTTGTTTATCAGGAGTCCTCATTTTGGTTGGGGCTATGCTATATCATTGCATCCTTGTCGATATATGATGAATACAGCAATGATATCCTTGACATGCCAGAAGGATCCTGCTTTCCAAGGCCAAACTACCGAAAGAAGGCCAAATTGGTCCGAACCAATTCTCGTGGACCCTCTTTCTCAAGGCCCGGCTCCTTCCGAAGTGTTCCCTCCCGCTCGGTTTCATTCACTAATCCTATCACTGAGTTGAATCCCCTTGAGCTAATGGATAGCTTATTTAAGGAGTGTAAACATCATGGGGAAATCATGGTTTCTGAAGGAATAATAACACTTCAAGACATTGAAGATGCTAAGTCCAGTAAAGGGAGCAGAGTTATAAGCATTGGCTTACCAGCTTATTGCCTTCTTCAAGCACTTCTGCGATCTGCAAAAGCAAATTCGGTGGGCATATTGTTAAGTGACAATGTTACTGAGTTGACTAGTTCAAACAGACCAAAAGAAACATTCTTTGATTGGTTTTTCAATCCGTTGTTGATCATCAAGGACCAGATAAAAGCAGAAAACCTTTCTGAAGCAGAAGAGGCCTACCTTTGCAAGTTAGTTCTGTTGAATGGTGATCCTTTGAGGTCGAAAAACTCAAACATTGGCTCAGCACCTGAATCCGAGCGTAAACAGGCTGAACTTGATGCATTTGCTCGAAGGCTCCAAGGTATCACTAAGTCTATCTCAAGGTATCCAACTTTTAGGCGTCGATTTGAGAATCTTGTGAATGCCATATCTGATGATCTTGCCCAGAATGATGGTAGCAGCAAACCAACCGATGGACCAAAAACAATTCCAAGATCAAAGAGTGCCTTTGCCCGATTGTTCAGCCAGAAATCTTTTAGTTTTACAAACAAAACAAGCAATCATGGGTATGATCCAGAGTCACAAACAGTCGTAAATGATGTGACAATCACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

591

Amino Acids

65.66

Weight (kDa)

8.07

Isoelectric Point (pI)

43.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 563, 1187
Acc36I ACCTGC 1 cut(s) 710
AccB7I CCANNNNNTGG 2 cut(s) 284, 1631
AccBSI CCGCTC 1 cut(s) 1026
AciI CCGC 1 cut(s) 1024
AclWI GGATC 6 cut(s) 526, 778, 912, 925, 1421, 1724
AcoI YGGCCR 4 cut(s) 164, 275, 740, 780
AcsI RAATTY 1 cut(s) 1246
AcuI CTGAAG 3 cut(s) 248, 1146, 1401
AcyI GRCGYC 1 cut(s) 1558
AfaI GTAC 3 cut(s) 171, 252, 386
AgsI TTSAA 9 cut(s) 353, 643, 1060, 1145, 1154, 1220, 1296, 1333, 1420
AhlI ACTAGT 1 cut(s) 1289
AjnI CCWGG 1 cut(s) 550
AjuI GAANNNNNNNTTGG 2 cut(s) 941, 973
AluBI AGCT 6 cut(s) 206, 224, 356, 1072, 1083, 1205
AluI AGCT 6 cut(s) 206, 224, 356, 1072, 1083, 1205
Alw21I GWGCWC 1 cut(s) 416
AlwI GGATC 6 cut(s) 526, 778, 912, 925, 1421, 1724
AlwNI CAGNNNCTG 1 cut(s) 1466
ApaI GGGCCC 1 cut(s) 689
ApeKI GCWGC 2 cut(s) 314, 1617
ApoI RAATTY 1 cut(s) 1246
AseI ATTAAT 1 cut(s) 113
Asp700I GAANNNNTTC 2 cut(s) 348, 970
AspS9I GGNCC 9 cut(s) 218, 506, 685, 686, 961, 980, 996, 1354, 1634
AsuC2I CCSGG 2 cut(s) 536, 999
AsuHPI GGTGA 2 cut(s) 324, 1436
AvaII GGWCC 5 cut(s) 506, 961, 980, 1354, 1634
BaeGI GKGCMC 1 cut(s) 689
BalI TGGCCA 2 cut(s) 277, 782
BamHI GGATCC 1 cut(s) 917
BanII GRGCYC 1 cut(s) 689
BauI CACGAG 1 cut(s) 975
BbsI GAAGAC 1 cut(s) 377
Bbv12I GWGCWC 1 cut(s) 416
BbvI GCAGC 2 cut(s) 326, 1629
BccI CCATC 3 cut(s) 395, 1604, 1625
BceAI ACGGC 1 cut(s) 727
BcgI CGANNNNNNTGC 2 cut(s) 852, 886
BciT130I CCWGG 1 cut(s) 552
BciVI GTATCC 1 cut(s) 1554
BclI TGATCA 1 cut(s) 1344
BcnI CCSGG 2 cut(s) 536, 999
BcuI ACTAGT 1 cut(s) 1289
BfaI CTAG 1 cut(s) 1290
BfuAI ACCTGC 1 cut(s) 710
BfuI GTATCC 1 cut(s) 1554
BisI GCNGC 2 cut(s) 315, 1618
BlpI GCTNAGC 1 cut(s) 1459
BlsI GCNGC 2 cut(s) 316, 1619
Bme1390I CCNGG 3 cut(s) 536, 552, 999
Bme18I GGWCC 5 cut(s) 506, 961, 980, 1354, 1634
BmgT120I GGNCC 9 cut(s) 218, 506, 685, 686, 961, 980, 996, 1354, 1634
BmiI GGNNCC 6 cut(s) 6, 687, 919, 982, 1003, 1514
BmrFI CCNGG 3 cut(s) 536, 552, 999
BmsI GCATC 5 cut(s) 505, 661, 872, 1147, 1486
BpiI GAAGAC 1 cut(s) 377
BpmI CTGGAG 2 cut(s) 495, 828
Bpu1102I GCTNAGC 1 cut(s) 1459
BpuEI CTTGAG 3 cut(s) 976, 1088, 1522
BpuMI CCSGG 2 cut(s) 536, 999
BsaHI GRCGYC 1 cut(s) 1558
BsaJI CCNNGG 5 cut(s) 421, 551, 574, 929, 1516
BsaXI ACNNNNNCTCC 2 cut(s) 801, 831
Bse118I RCCGGY 1 cut(s) 166
Bse1I ACTGG 4 cut(s) 278, 335, 783, 1167
Bse3DI GCAATG 2 cut(s) 858, 898
BseBI CCWGG 1 cut(s) 552
BseDI CCNNGG 5 cut(s) 421, 551, 574, 929, 1516
BseGI GGATG 3 cut(s) 460, 493, 863
BseMI GCAATG 2 cut(s) 858, 898
BseMII CTCAG 4 cut(s) 485, 1044, 1272, 1473
BseNI ACTGG 4 cut(s) 278, 335, 783, 1167
BseSI GKGCMC 1 cut(s) 689
BseXI GCAGC 2 cut(s) 326, 1629
BseYI CCCAGC 1 cut(s) 766
BsiHKAI GWGCWC 1 cut(s) 416
BsiSI CCGG 3 cut(s) 167, 535, 999
BsmI GAATGC 1 cut(s) 1585
Bsp120I GGGCCC 1 cut(s) 685
Bsp1286I GDGCHC 2 cut(s) 416, 689
Bsp1720I GCTNAGC 1 cut(s) 1459
BspACI CCGC 1 cut(s) 1024
BspCNI CTCAG 4 cut(s) 486, 1045, 1273, 1472
BspHI TCATGA 2 cut(s) 126, 664
BspLI GGNNCC 6 cut(s) 6, 687, 919, 982, 1003, 1514
BspMI ACCTGC 1 cut(s) 710
BspPI GGATC 6 cut(s) 526, 778, 912, 925, 1421, 1724
BsrBI CCGCTC 1 cut(s) 1026
BsrDI GCAATG 2 cut(s) 858, 898
BsrFI RCCGGY 1 cut(s) 166
BsrI ACTGG 4 cut(s) 278, 335, 783, 1167
BssAI RCCGGY 1 cut(s) 166
BssECI CCNNGG 5 cut(s) 421, 551, 574, 929, 1516
BssNI GRCGYC 1 cut(s) 1558
BssSI CACGAG 1 cut(s) 975
BssT1I CCWWGG 4 cut(s) 421, 574, 929, 1516
Bst2BI CACGAG 1 cut(s) 975
Bst2UI CCWGG 1 cut(s) 552
Bst4CI ACNGT 3 cut(s) 418, 436, 1747
Bst6I CTCTTC 1 cut(s) 1383
BstACI GRCGYC 1 cut(s) 1558
BstAPI GCANNNNNTGC 1 cut(s) 725
BstC8I GCNNGC 1 cut(s) 222
BstDEI CTNAG 6 cut(s) 494, 1053, 1161, 1281, 1459, 1527
BstF5I GGATG 3 cut(s) 460, 493, 863
BstMWI GCNNNNNNNGC 2 cut(s) 725, 1391
BstNI CCWGG 1 cut(s) 552
BstNSI RCATGY 3 cut(s) 199, 637, 910
BstSCI CCNGG 3 cut(s) 534, 550, 997
BstSLI GKGCMC 1 cut(s) 689
BstV1I GCAGC 2 cut(s) 326, 1629
BstV2I GAAGAC 1 cut(s) 377
BstX2I RGATCY 2 cut(s) 531, 917
BstXI CCANNNNNNTGG 1 cut(s) 1610
BstYI RGATCY 2 cut(s) 531, 917
BsuI GTATCC 1 cut(s) 1554
BtsCI GGATG 3 cut(s) 460, 493, 863
BtsI GCAGTG 2 cut(s) 388, 768
BtsIMutI CAGTG 5 cut(s) 285, 388, 432, 768, 1050
BveI ACCTGC 1 cut(s) 710
Cac8I GCNNGC 1 cut(s) 222
CaiI CAGNNNCTG 1 cut(s) 1466
CciI TCATGA 2 cut(s) 126, 664
Cfr10I RCCGGY 1 cut(s) 166
Cfr13I GGNCC 9 cut(s) 218, 506, 685, 686, 961, 980, 996, 1354, 1634
CseI GACGC 1 cut(s) 1547
Csp6I GTAC 3 cut(s) 170, 251, 385
CspCI CAANNNNNGTGG 4 cut(s) 958, 993, 1233, 1268
CviAII CATG 9 cut(s) 127, 196, 583, 634, 665, 907, 1106, 1117, 1721
CviQI GTAC 3 cut(s) 170, 251, 385
DdeI CTNAG 6 cut(s) 494, 1053, 1161, 1281, 1459, 1527
DraI TTTAAA 1 cut(s) 91
EaeI YGGCCR 4 cut(s) 164, 275, 740, 780
Eam1104I CTCTTC 1 cut(s) 1383
EarI CTCTTC 1 cut(s) 1383
Eco130I CCWWGG 4 cut(s) 421, 574, 929, 1516
Eco147I AGGCCT 1 cut(s) 1394
Eco24I GRGCYC 1 cut(s) 689
Eco32I GATATC 1 cut(s) 898
Eco47I GGWCC 5 cut(s) 506, 961, 980, 1354, 1634
Eco57I CTGAAG 3 cut(s) 248, 1146, 1401
EcoO109I RGGNCCY 3 cut(s) 506, 685, 686
EcoRII CCWGG 1 cut(s) 550
EcoRV GATATC 1 cut(s) 898
EcoT14I CCWWGG 4 cut(s) 421, 574, 929, 1516
EcoT22I ATGCAT 1 cut(s) 1501
EcoT38I GRGCYC 1 cut(s) 689
ErhI CCWWGG 4 cut(s) 421, 574, 929, 1516
FaeI CATG 9 cut(s) 130, 199, 586, 637, 668, 910, 1109, 1120, 1724
FalI AAGNNNNNCTT 2 cut(s) 1649, 1681
FatI CATG 9 cut(s) 126, 195, 582, 633, 664, 906, 1105, 1116, 1720
FauI CCCGC 1 cut(s) 1031
FauNDI CATATG 1 cut(s) 319
FbaI TGATCA 1 cut(s) 1344
Fnu4HI GCNGC 2 cut(s) 315, 1618
FokI GGATG 3 cut(s) 467, 500, 850
FriOI GRGCYC 1 cut(s) 689
Fsp4HI GCNGC 2 cut(s) 315, 1618
FspBI CTAG 1 cut(s) 1290
GluI GCNGC 2 cut(s) 315, 1618
GsaI CCCAGC 1 cut(s) 770
GsuI CTGGAG 2 cut(s) 495, 828
HapII CCGG 3 cut(s) 167, 535, 999
HgaI GACGC 1 cut(s) 1547
Hin1I GRCGYC 1 cut(s) 1558
Hin1II CATG 9 cut(s) 130, 199, 586, 637, 668, 910, 1109, 1120, 1724
HincII GTYRAC 1 cut(s) 1287
HindII GTYRAC 1 cut(s) 1287
HinfI GANTC 6 cut(s) 288, 827, 1060, 1469, 1570, 1736
HpaII CCGG 3 cut(s) 167, 535, 999
HphI GGTGA 2 cut(s) 324, 1436
Hpy166II GTNNAC 5 cut(s) 172, 980, 1100, 1287, 1481
Hpy188I TCNGA 7 cut(s) 228, 965, 1010, 1126, 1381, 1474, 1591
Hpy188III TCNNGA 8 cut(s) 127, 181, 512, 665, 680, 824, 1145, 1733
Hpy8I GTNNAC 5 cut(s) 172, 980, 1100, 1287, 1481
Hpy99I CGWCG 1 cut(s) 1563
HpyAV CCTTC 9 cut(s) 80, 86, 359, 908, 943, 1015, 1121, 1223, 1503
HpyCH4III ACNGT 3 cut(s) 418, 436, 1747
HpyCH4V TGCA 9 cut(s) 195, 243, 518, 621, 719, 863, 1238, 1404, 1499
HpyF10VI GCNNNNNNNGC 2 cut(s) 725, 1391
HpyF3I CTNAG 6 cut(s) 494, 1053, 1161, 1281, 1459, 1527
Hsp92I GRCGYC 1 cut(s) 1558
Hsp92II CATG 9 cut(s) 130, 199, 586, 637, 668, 910, 1109, 1120, 1724
Ksp22I TGATCA 1 cut(s) 1344
LmnI GCTCC 5 cut(s) 311, 411, 1007, 1176, 1518
Lsp1109I GCAGC 2 cut(s) 326, 1629
LweI GCATC 5 cut(s) 505, 661, 872, 1147, 1486
MaeI CTAG 1 cut(s) 1290
MaeIII GTNAC 5 cut(s) 461, 1268, 1276, 1737, 1759
MbiI CCGCTC 1 cut(s) 1026
MboII GAAGA 6 cut(s) 241, 382, 539, 1166, 1208, 1400
MfeI CAATTG 3 cut(s) 132, 263, 380
MflI RGATCY 2 cut(s) 531, 917
MhlI GDGCHC 2 cut(s) 416, 689
MlsI TGGCCA 2 cut(s) 277, 782
MluCI AATT 8 cut(s) 114, 132, 263, 380, 956, 970, 1246, 1644
MluNI TGGCCA 2 cut(s) 277, 782
MlyI GAGTC 2 cut(s) 836, 1745
MmeI TCCRAC 4 cut(s) 265, 274, 340, 1571
MnlI CCTC 7 cut(s) 519, 676, 841, 994, 1030, 1384, 1428
Mox20I TGGCCA 2 cut(s) 277, 782
Mph1103I ATGCAT 1 cut(s) 1501
MroXI GAANNNNTTC 2 cut(s) 348, 970
MscI TGGCCA 2 cut(s) 277, 782
MseI TTAA 4 cut(s) 90, 113, 1089, 1265
MslI CAYNNNNRTG 1 cut(s) 1725
Msp20I TGGCCA 2 cut(s) 277, 782
MspI CCGG 3 cut(s) 167, 535, 999
MspR9I CCNGG 3 cut(s) 536, 552, 999
MunI CAATTG 3 cut(s) 132, 263, 380
Mva1269I GAATGC 1 cut(s) 1585
MvaI CCWGG 1 cut(s) 552
MwoI GCNNNNNNNGC 2 cut(s) 725, 1391
NciI CCSGG 2 cut(s) 536, 999
NdeI CATATG 1 cut(s) 319
NlaIII CATG 9 cut(s) 130, 199, 586, 637, 668, 910, 1109, 1120, 1724
NlaIV GGNNCC 6 cut(s) 6, 687, 919, 982, 1003, 1514
NmeAIII GCCGAG 1 cut(s) 122
NmuCI GTSAC 3 cut(s) 1268, 1737, 1759
NsiI ATGCAT 1 cut(s) 1501
NspI RCATGY 3 cut(s) 199, 637, 910
PagI TCATGA 2 cut(s) 126, 664
PceI AGGCCT 1 cut(s) 1394
PctI GAATGC 1 cut(s) 1585
PdmI GAANNNNTTC 2 cut(s) 348, 970
PfeI GAWTC 4 cut(s) 288, 1060, 1469, 1570
PflMI CCANNNNNTGG 2 cut(s) 284, 1631
PkrI GCNGC 2 cut(s) 316, 1619
PleI GAGTC 2 cut(s) 835, 1744
PpsI GAGTC 2 cut(s) 835, 1744
PpuMI RGGWCCY 1 cut(s) 506
PshBI ATTAAT 1 cut(s) 113
PsiI TTATAA 2 cut(s) 563, 1187
Psp5II RGGWCCY 1 cut(s) 506
Psp6I CCWGG 1 cut(s) 550
PspFI CCCAGC 1 cut(s) 766
PspGI CCWGG 1 cut(s) 550
PspN4I GGNNCC 6 cut(s) 6, 687, 919, 982, 1003, 1514
PspOMI GGGCCC 1 cut(s) 685
PspPI GGNCC 9 cut(s) 218, 506, 685, 686, 961, 980, 996, 1354, 1634
PspPPI RGGWCCY 1 cut(s) 506
PstNI CAGNNNCTG 1 cut(s) 1466
PsuI RGATCY 2 cut(s) 531, 917
RsaI GTAC 3 cut(s) 171, 252, 386
RsaNI GTAC 3 cut(s) 170, 251, 385
RseI CAYNNNNRTG 1 cut(s) 1725
SaqAI TTAA 4 cut(s) 90, 113, 1089, 1265
SatI GCNGC 2 cut(s) 315, 1618
Sau96I GGNCC 9 cut(s) 218, 506, 685, 686, 961, 980, 996, 1354, 1634
SchI GAGTC 2 cut(s) 836, 1745
ScrFI CCNGG 3 cut(s) 536, 552, 999
SduI GDGCHC 2 cut(s) 416, 689
SfaNI GCATC 5 cut(s) 505, 661, 872, 1147, 1486
SinI GGWCC 5 cut(s) 506, 961, 980, 1354, 1634
SmiMI CAYNNNNRTG 1 cut(s) 1725
SmlI CTYRAG 3 cut(s) 991, 1067, 1537
SmoI CTYRAG 3 cut(s) 991, 1067, 1537
SpeI ACTAGT 1 cut(s) 1289
Sse9I AATT 8 cut(s) 114, 132, 263, 380, 956, 970, 1246, 1644
SseBI AGGCCT 1 cut(s) 1394
SsiI CCGC 1 cut(s) 1024
SspI AATATT 1 cut(s) 524
SspMI CTAG 1 cut(s) 1290
StuI AGGCCT 1 cut(s) 1394
StyD4I CCNGG 3 cut(s) 534, 550, 997
StyI CCWWGG 4 cut(s) 421, 574, 929, 1516
TaaI ACNGT 3 cut(s) 418, 436, 1747
TaqI TCGA 4 cut(s) 872, 1439, 1507, 1561
TasI AATT 8 cut(s) 114, 132, 263, 380, 956, 970, 1246, 1644
TatI WGTACW 1 cut(s) 250
TfiI GAWTC 4 cut(s) 288, 1060, 1469, 1570
Tru1I TTAA 4 cut(s) 90, 113, 1089, 1265
Tru9I TTAA 4 cut(s) 90, 113, 1089, 1265
TscAI CASTG 5 cut(s) 285, 395, 439, 768, 1057
TseFI GTSAC 3 cut(s) 1268, 1737, 1759
TseI GCWGC 2 cut(s) 314, 1617
Tsp45I GTSAC 3 cut(s) 1268, 1737, 1759
TspDTI ATGAA 6 cut(s) 31, 52, 571, 653, 897, 1023
TspGWI ACGGA 1 cut(s) 1326
TspRI CASTG 5 cut(s) 285, 395, 439, 768, 1057
Van91I CCANNNNNTGG 2 cut(s) 284, 1631
VpaK11BI GGWCC 5 cut(s) 506, 961, 980, 1354, 1634
VspI ATTAAT 1 cut(s) 113
XapI RAATTY 1 cut(s) 1246
XceI RCATGY 3 cut(s) 199, 637, 910
XmnI GAANNNNTTC 2 cut(s) 348, 970
XspI CTAG 1 cut(s) 1290
Zsp2I ATGCAT 1 cut(s) 1501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.