Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003188.1

Orthogroup ID

OG0005016

Physical Location & Seq

Genomic Coordinates Forward (+)

30441 .. 36128

Gene Structure 5688 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003188.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2799 bp

atggaacctccaactgggtttttggctacgctgtggaacttcatctgttttctgccttactttattgggcttcttcttcttggcacggttaaaggaattttcttctgtccattgatttgccttatcattggagttggaaacaccgctatcatattgggtctttggcctgttcacattgtttggacctattattgcatcttgagcgctaaacaatttgggccagttctgaagattgttgtctgcataactatactacctctccaattgatcttgtggccggtggttggaattgttggaagtgtattgggtggagcagcatatggcttactttcaccagtatttgaaacttttcaagctgttggagaagggaagaccaatcagttgtaccactgcttttacgatggaactgtaagcacggttaagggaagcttcactgttgtgagggattttaaggatgtctgttaccatacatacttctcagttatggatgacctgaaaagtcagggtcctccaaaatattatgaaatcaggttgctttatcttcctggggctgttctagcaggggtccttggtttcatggttgatatgccattgatctcatttattgccatttacaaaagcccatacatgctcttcaaggggtggcaccgtttgtttcatgaccttattggtcgggagggccctttcttggaaacaatatgtgttccgtttgcaggtcttgctatcctagtctggccattggctgttgttggggcagttttggcatctatggtggctagcatatttcatggtgcttatgctggagtggtagtttatcaggagtcctctctttggatggggcttcgctttatcattgcatccttagccatatatgatgaatacagcaatgatatccttgacatgccagaaggatcctgctttccaaggctaacctaccgaaaaaaggctgaatcgcttccaaccacctctcgcgcaccttctttctcaaagcatagatctttgaaaaatgctccttcattcaataatgctatgattgagttgaagccccttgaggtaatggatagcttatttagggagtgcaaacgatatggggaaatcctgttttctgaaggaacaataactcgtcaagacctcgaagatgccaagtctagtaaaggaagtagagttattagcactggcttgccagcttgttgccttcttcagacactcttgcgatctgcaaaagccaattcggcgggcatattgttaattgacaactgtactgagataactagctcaaacagaccaaaagacacaatctttgattggtttctcaaccccctcttgatcatcaaggatcagatcaaagcagaaaagcttactgagtcagaagagtactacctcggcaaattagtgctattgagtggtgatcctgtgaggttgaaaaactcaaacatcggctcaccacctgattcagagcgtaaacaagctgaacttgatgcattggctcgaaggctccaaggtattactaaatcaatctcaagatacccaacttataggcgccggtttgaggagcttgtcaaagccttatctgatgaacttggccagaataatgaaggtagtatcaaaccaaccagcggccccaataccattgcaagatcaaagagtgcctttgcccggttgttcacccagaaatcttttagttttacaagcaaaacaagcaatcacggggcttttgagttccaggttggtggaactcaaggttgggtcgtccctccaaccaatgacagcaaggtctacaacgactgggcttcagaaaacaggttccaaatcggcaacgccatccgttttaagtacaagaaggactcggtgatggaggtgaccgaagaggactacaagaagtgcaattcaagtcatcccaacttcttctccaacaatggaaacactgtctacaggtttgaccattcggggtcgttttacttcatcagtggggcagccggacactgcgaaaaggggcagaggatgatcgttaaggtcatgtcgaccgatgaggagtctccgttgggcaagaaatcggctggctatcgtgttatcttgtcctccgatcccatcttgaatcgggataattatgttgttgttgtgctctacggttatggtggttcaaagttggctttcatcaaaggaggacaacaaagatggacttatcccgataggcgtcaaagctgccttaaggatgccatattttatagaaaccaagtttatgcagttggcggaggcgatggaaatgaaaaaatcctctcatttgatgttaatagttgtaataaaccttcaaagcctccaaaagcaaaccagcgtacgcctaataatgtcctaaaaaaatgcgctgctagttcatatcttgtggaatcagtcgagggagaccacctatggcatgttagaagactagtttcttattcaaggagagccgataagtacattgagaggtttatggtttacaaggtggcgtttgaggacaaagatggatcggttgtggaacaagtagaggtacaaagcatcggagacgaaactctgtttgtgggtgcatctcattcaatagccgtcctggcttcaaactttcctgggtgtaagccaaattccatatactatgccacagaggagccgtattgttttggagatccggaccacaaaacctatcatatatctagtctagatgatggaaccatcacggaatatcagcaaaacctacgccggcatccaagtttacatttaggaattccatgtggagtttggattctaccaatgtttaagggactattctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

932

Amino Acids

104.11

Weight (kDa)

8.66

Isoelectric Point (pI)

43.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005016)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27390 AT3G27390 AT5G40640
fragaria_vesca	FvH4_6g52230 FvH4_6g52230 FvH4_6g52230 FvH4_6g52230 FvH4_6g52230
malus_domestica	MD09G1019400.v1.1 MD17G1020000.v1.1
prunus_persica	Prupe.3G297000_v2.0.a1 Prupe.3G297000_v2.0.a1 Prupe.3G297000_v2.0.a1 Prupe.3G297600_v2.0.a1
pyrus_communis	pycom111g01610 pycom17g01660
rosa_chinensis	RchiOBHm_Chr2g0173781
rosa_laevigata	RLG00000022221
rosa_multiflora	Rmu_co8383453.1_g000001 Rmu_sc0003188.1_g000007 Rmu_sc0034272.1_g000001
rosa_roxburghii	Rroxscaffold_2G00078630
rosa_rugosa	Rorug02G0572700 Rorug02G0572700 Rorug02G0572700
rosa_samantha	Rh2AG651700 Rh2BG662400 Rh2CG627100 Rh2DG677500
rosa_wichuraiana	Rw2G053500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1772
Acc36I	ACCTGC	1 cut(s)	704
AccB1I	GGYRCC	2 cut(s)	645, 1539
AccI	GTMKAC	3 cut(s)	1776, 1929, 2021
AccII	CGCG	1 cut(s)	972
AccIII	TCCGGA	1 cut(s)	2656
AciI	CCGC	4 cut(s)	144, 1235, 1617, 2250
AclWI	GGATC	7 cut(s)	906, 919, 1344, 1403, 2078, 2509, 2648
AcoI	YGGCCR	3 cut(s)	275, 734, 1582
AcsI	RAATTY	3 cut(s)	96, 2611, 2751
AcuI	CTGAAG	4 cut(s)	248, 1128, 1184, 1776
AcyI	GRCGYC	2 cut(s)	1540, 2194
AfaI	GTAC	7 cut(s)	386, 1261, 1376, 1835, 2335, 2453, 2526
AfeI	AGCGCT	1 cut(s)	205
AfiI	CCNNNNNNNGG	9 cut(s)	14, 284, 688, 713, 831, 943, 1549, 1616, 1656
AflII	CTTAAG	1 cut(s)	2207
AhlI	ACTAGT	1 cut(s)	2422
AjnI	CCWGG	4 cut(s)	544, 1722, 2580, 2596
AjuI	GAANNNNNNNTTGG	2 cut(s)	1726, 1758
AleI	CACNNNNGTG	1 cut(s)	437
AluBI	AGCT	9 cut(s)	356, 429, 1065, 1187, 1275, 1357, 1469, 1555, 2202
AluI	AGCT	9 cut(s)	356, 429, 1065, 1187, 1275, 1357, 1469, 1555, 2202
Alw21I	GWGCWC	1 cut(s)	2124
Alw26I	GTCTC	3 cut(s)	2040, 2391, 2532
AlwI	GGATC	7 cut(s)	906, 919, 1344, 1403, 2078, 2509, 2648
Aor13HI	TCCGGA	1 cut(s)	2656
Aor51HI	AGCGCT	1 cut(s)	205
AoxI	GGCC	7 cut(s)	164, 218, 275, 679, 734, 1582, 1618
ApaI	GGGCCC	1 cut(s)	683
ApeKI	GCWGC	4 cut(s)	314, 1973, 2202, 2363
ApoI	RAATTY	3 cut(s)	96, 2611, 2751
ArsI	GACNNNNNNTTYG	2 cut(s)	1283, 1315
Asp700I	GAANNNNTTC	2 cut(s)	348, 954
AspLEI	GCGC	4 cut(s)	206, 974, 1542, 2363
AspS9I	GGNCC	8 cut(s)	183, 218, 506, 565, 679, 680, 1619, 2659
AsuC2I	CCSGG	1 cut(s)	1657
AsuHPI	GGTGA	6 cut(s)	324, 1418, 1434, 1657, 1861, 1870
AsuNHI	GCTAGC	1 cut(s)	776
AvaII	GGWCC	4 cut(s)	183, 506, 565, 2659
BaeGI	GKGCMC	1 cut(s)	683
BalI	TGGCCA	2 cut(s)	736, 1584
BamHI	GGATCC	1 cut(s)	911
BanI	GGYRCC	2 cut(s)	645, 1539
BanII	GRGCYC	1 cut(s)	683
BarI	GAAGNNNNNNTAC	2 cut(s)	2290, 2322
BbsI	GAAGAC	2 cut(s)	377, 2425
Bbv12I	GWGCWC	1 cut(s)	2124
BbvI	GCAGC	4 cut(s)	326, 1985, 2189, 2350
BceAI	ACGGC	2 cut(s)	2561, 2623
BciT130I	CCWGG	4 cut(s)	546, 1724, 2582, 2598
BclI	TGATCA	1 cut(s)	1326
BcnI	CCSGG	1 cut(s)	1657
BcoDI	GTCTC	3 cut(s)	2040, 2391, 2532
BcuI	ACTAGT	1 cut(s)	2422
BfmI	CTRYAG	1 cut(s)	1930
BfoI	RGCGCY	2 cut(s)	207, 1543
BfrI	CTTAAG	1 cut(s)	2207
BfuAI	ACCTGC	1 cut(s)	704
BglI	GCCNNNNNGGC	2 cut(s)	1232, 2582
BglII	AGATCT	1 cut(s)	995
BisI	GCNGC	5 cut(s)	315, 1618, 1974, 2203, 2364
BlsI	GCNGC	5 cut(s)	316, 1619, 1975, 2204, 2365
BmcAI	AGTACT	1 cut(s)	1376
Bme1390I	CCNGG	5 cut(s)	546, 1657, 1724, 2582, 2598
Bme18I	GGWCC	4 cut(s)	183, 506, 565, 2659
BmgT120I	GGNCC	8 cut(s)	183, 218, 506, 565, 679, 680, 1619, 2659
BmrFI	CCNGG	5 cut(s)	546, 1657, 1724, 2582, 2598
BmrI	ACTGGG	2 cut(s)	24, 1795
BmsI	GCATC	9 cut(s)	204, 773, 866, 1129, 1468, 2203, 2541, 2570, 2740
BmtI	GCTAGC	1 cut(s)	780
BmuI	ACTGGG	2 cut(s)	24, 1795
BpiI	GAAGAC	2 cut(s)	377, 2425
BpmI	CTGGAG	1 cut(s)	822
Bpu10I	CCTNAGC	1 cut(s)	862
BpuEI	CTTGAG	4 cut(s)	220, 1070, 1504, 1722
BpuMI	CCSGG	1 cut(s)	1657
BsaHI	GRCGYC	2 cut(s)	1540, 2194
BsaI	GGTCTC	1 cut(s)	2391
BsaJI	CCNNGG	6 cut(s)	545, 568, 923, 1381, 1498, 2597
BsaWI	WCCGGW	1 cut(s)	2656
BsaXI	ACNNNNNCTCC	8 cut(s)	243, 273, 795, 825, 1892, 1922, 2024, 2054
Bsc4I	CCNNNNNNNGG	9 cut(s)	14, 284, 688, 713, 831, 943, 1549, 1616, 1656
Bse118I	RCCGGY	3 cut(s)	277, 1542, 2727
Bse1I	ACTGG	5 cut(s)	19, 221, 335, 1180, 1790
Bse3DI	GCAATG	3 cut(s)	852, 892, 1629
BseAI	TCCGGA	1 cut(s)	2656
BseBI	CCWGG	4 cut(s)	546, 1724, 2582, 2598
BseDI	CCNNGG	6 cut(s)	545, 568, 923, 1381, 1498, 2597
BseGI	GGATG	9 cut(s)	460, 493, 840, 857, 1821, 1894, 2007, 2218, 2731
BseLI	CCNNNNNNNGG	9 cut(s)	14, 284, 688, 713, 831, 943, 1549, 1616, 1656
BseMI	GCAATG	3 cut(s)	852, 892, 1629
BseMII	CTCAG	3 cut(s)	492, 1254, 1353
BseNI	ACTGG	5 cut(s)	19, 221, 335, 1180, 1790
BseRI	GAGGAG	3 cut(s)	1565, 2045, 2648
BseSI	GKGCMC	1 cut(s)	683
BseXI	GCAGC	4 cut(s)	326, 1985, 2189, 2350
Bsh1236I	CGCG	1 cut(s)	972
Bsh1285I	CGRYCG	1 cut(s)	2025
BshFI	GGCC	7 cut(s)	166, 220, 277, 681, 736, 1584, 1620
BshNI	GGYRCC	2 cut(s)	645, 1539
BsiEI	CGRYCG	1 cut(s)	2025
BsiHKAI	GWGCWC	1 cut(s)	2124
BsiSI	CCGG	6 cut(s)	278, 1543, 1657, 1977, 2657, 2728
BsiWI	CGTACG	1 cut(s)	2333
BslFI	GGGAC	1 cut(s)	1736
BslI	CCNNNNNNNGG	9 cut(s)	14, 284, 688, 713, 831, 943, 1549, 1616, 1656
BsmAI	GTCTC	3 cut(s)	2040, 2391, 2532
BsmBI	CGTCTC	1 cut(s)	2532
BsmFI	GGGAC	1 cut(s)	1736
BsnI	GGCC	7 cut(s)	166, 220, 277, 681, 736, 1584, 1620
Bso31I	GGTCTC	1 cut(s)	2391
Bsp120I	GGGCCC	1 cut(s)	679
Bsp1286I	GDGCHC	2 cut(s)	683, 2124
Bsp13I	TCCGGA	1 cut(s)	2656
BspACI	CCGC	4 cut(s)	144, 1235, 1617, 2250
BspANI	GGCC	7 cut(s)	166, 220, 277, 681, 736, 1584, 1620
BspCNI	CTCAG	3 cut(s)	491, 1255, 1354
BspEI	TCCGGA	1 cut(s)	2656
BspFNI	CGCG	1 cut(s)	972
BspHI	TCATGA	1 cut(s)	658
BspMI	ACCTGC	1 cut(s)	704
BspOI	GCTAGC	1 cut(s)	780
BspPI	GGATC	7 cut(s)	906, 919, 1344, 1403, 2078, 2509, 2648
BspQI	GCTCTTC	1 cut(s)	638
BspT107I	GGYRCC	2 cut(s)	645, 1539
BspTI	CTTAAG	1 cut(s)	2207
BspTNI	GGTCTC	1 cut(s)	2391
BsrDI	GCAATG	3 cut(s)	852, 892, 1629
BsrFI	RCCGGY	3 cut(s)	277, 1542, 2727
BsrI	ACTGG	5 cut(s)	19, 221, 335, 1180, 1790
BssAI	RCCGGY	3 cut(s)	277, 1542, 2727
BssECI	CCNNGG	6 cut(s)	545, 568, 923, 1381, 1498, 2597
BssNI	GRCGYC	2 cut(s)	1540, 2194
BssT1I	CCWWGG	3 cut(s)	568, 923, 1498
Bst2UI	CCWGG	4 cut(s)	546, 1724, 2582, 2598
Bst4CI	ACNGT	8 cut(s)	88, 409, 418, 436, 650, 1259, 1927, 2129
Bst6I	CTCTTC	3 cut(s)	638, 1365, 1860
BstACI	GRCGYC	2 cut(s)	1540, 2194
BstAFI	CTTAAG	1 cut(s)	2207
BstAPI	GCANNNNNTGC	1 cut(s)	719
BstC8I	GCNNGC	6 cut(s)	778, 1181, 1185, 1237, 2059, 2729
BstDEI	CTNAG	4 cut(s)	478, 862, 1263, 1362
BstEII	GGTNACC	1 cut(s)	1858
BstF5I	GGATG	9 cut(s)	460, 493, 840, 857, 1821, 1894, 2007, 2218, 2731
BstFNI	CGCG	1 cut(s)	972
BstH2I	RGCGCY	2 cut(s)	207, 1543
BstHHI	GCGC	4 cut(s)	206, 974, 1542, 2363
BstMAI	GTCTC	3 cut(s)	2040, 2391, 2532
BstMCI	CGRYCG	1 cut(s)	2025
BstMWI	GCNNNNNNNGC	8 cut(s)	201, 557, 719, 761, 863, 1232, 1698, 2582
BstNI	CCWGG	4 cut(s)	546, 1724, 2582, 2598
BstNSI	RCATGY	3 cut(s)	631, 904, 2414
BstPI	GGTNACC	1 cut(s)	1858
BstSCI	CCNGG	5 cut(s)	544, 1655, 1722, 2580, 2596
BstSFI	CTRYAG	1 cut(s)	1930
BstSLI	GKGCMC	1 cut(s)	683
BstUI	CGCG	1 cut(s)	972
BstV1I	GCAGC	4 cut(s)	326, 1985, 2189, 2350
BstV2I	GAAGAC	2 cut(s)	377, 2425
BstX2I	RGATCY	3 cut(s)	911, 995, 2653
BstXI	CCANNNNNNTGG	1 cut(s)	1730
BstYI	RGATCY	3 cut(s)	911, 995, 2653
BsuRI	GGCC	7 cut(s)	166, 220, 277, 681, 736, 1584, 1620
BtgZI	GCGATG	1 cut(s)	2271
BtsCI	GGATG	9 cut(s)	460, 493, 840, 857, 1821, 1894, 2007, 2218, 2731
BtsI	GCAGTG	2 cut(s)	388, 1981
BtsIMutI	CAGTG	6 cut(s)	388, 432, 1173, 1923, 1972, 1981
BveI	ACCTGC	1 cut(s)	704
Cac8I	GCNNGC	6 cut(s)	778, 1181, 1185, 1237, 2059, 2729
CciI	TCATGA	1 cut(s)	658
CfoI	GCGC	4 cut(s)	206, 974, 1542, 2363
Cfr10I	RCCGGY	3 cut(s)	277, 1542, 2727
Cfr13I	GGNCC	8 cut(s)	183, 218, 506, 565, 679, 680, 1619, 2659
CseI	GACGC	1 cut(s)	2183
Csp6I	GTAC	7 cut(s)	385, 1260, 1375, 1834, 2334, 2452, 2525
CviAII	CATG	8 cut(s)	577, 628, 659, 788, 901, 2017, 2411, 2757
CviQI	GTAC	7 cut(s)	385, 1260, 1375, 1834, 2334, 2452, 2525
DdeI	CTNAG	4 cut(s)	478, 862, 1263, 1362
DinI	GGCGCC	1 cut(s)	1541
DrdI	GACNNNNNNGTC	1 cut(s)	1772
DseDI	GACNNNNNNGTC	1 cut(s)	1772
EaeI	YGGCCR	3 cut(s)	275, 734, 1582
Eam1104I	CTCTTC	3 cut(s)	638, 1365, 1860
EarI	CTCTTC	3 cut(s)	638, 1365, 1860
EciI	GGCGGA	1 cut(s)	2265
Eco130I	CCWWGG	3 cut(s)	568, 923, 1498
Eco24I	GRGCYC	1 cut(s)	683
Eco31I	GGTCTC	1 cut(s)	2391
Eco32I	GATATC	1 cut(s)	892
Eco47I	GGWCC	4 cut(s)	183, 506, 565, 2659
Eco47III	AGCGCT	1 cut(s)	205
Eco57I	CTGAAG	4 cut(s)	248, 1128, 1184, 1776
Eco91I	GGTNACC	1 cut(s)	1858
EcoO109I	RGGNCCY	4 cut(s)	506, 565, 679, 680
EcoO65I	GGTNACC	1 cut(s)	1858
EcoRI	GAATTC	1 cut(s)	2751
EcoRII	CCWGG	4 cut(s)	544, 1722, 2580, 2596
EcoRV	GATATC	1 cut(s)	892
EcoT14I	CCWWGG	3 cut(s)	568, 923, 1498
EcoT22I	ATGCAT	1 cut(s)	1483
EcoT38I	GRGCYC	1 cut(s)	683
EgeI	GGCGCC	1 cut(s)	1541
EheI	GGCGCC	1 cut(s)	1541
ErhI	CCWWGG	3 cut(s)	568, 923, 1498
Esp3I	CGTCTC	1 cut(s)	2532
FaeI	CATG	8 cut(s)	580, 631, 662, 791, 904, 2020, 2414, 2760
FalI	AAGNNNNNCTT	8 cut(s)	413, 445, 1458, 1490, 1634, 1666, 2164, 2196
FaqI	GGGAC	1 cut(s)	1736
FatI	CATG	8 cut(s)	576, 627, 658, 787, 900, 2016, 2410, 2756
FauI	CCCGC	1 cut(s)	1228
FauNDI	CATATG	1 cut(s)	319
FbaI	TGATCA	1 cut(s)	1326
FblI	GTMKAC	3 cut(s)	1776, 1929, 2021
Fnu4HI	GCNGC	5 cut(s)	315, 1618, 1974, 2203, 2364
FokI	GGATG	9 cut(s)	467, 500, 844, 847, 1808, 1881, 2014, 2225, 2718
FriOI	GRGCYC	1 cut(s)	683
Fsp4HI	GCNGC	5 cut(s)	315, 1618, 1974, 2203, 2364
GlaI	GCGC	4 cut(s)	205, 973, 1541, 2362
GluI	GCNGC	5 cut(s)	315, 1618, 1974, 2203, 2364
GsuI	CTGGAG	1 cut(s)	822
HaeII	RGCGCY	2 cut(s)	207, 1543
HaeIII	GGCC	7 cut(s)	166, 220, 277, 681, 736, 1584, 1620
HapII	CCGG	6 cut(s)	278, 1543, 1657, 1977, 2657, 2728
HgaI	GACGC	1 cut(s)	2183
HhaI	GCGC	4 cut(s)	206, 974, 1542, 2363
Hin1I	GRCGYC	2 cut(s)	1540, 2194
Hin1II	CATG	8 cut(s)	580, 631, 662, 791, 904, 2020, 2414, 2760
Hin6I	GCGC	4 cut(s)	204, 972, 1540, 2361
HinP1I	GCGC	4 cut(s)	204, 972, 1540, 2361
HincII	GTYRAC	1 cut(s)	2022
HindII	GTYRAC	1 cut(s)	2022
HindIII	AAGCTT	2 cut(s)	427, 1355
HinfI	GANTC	9 cut(s)	821, 950, 1364, 1451, 1844, 2033, 2095, 2384, 2770
HpaII	CCGG	6 cut(s)	278, 1543, 1657, 1977, 2657, 2728
HphI	GGTGA	6 cut(s)	324, 1418, 1434, 1657, 1861, 1870
Hpy166II	GTNNAC	8 cut(s)	172, 1463, 1665, 1777, 1930, 2022, 2473, 2741
Hpy8I	GTNNAC	8 cut(s)	172, 1463, 1665, 1777, 1930, 2022, 2473, 2741
HpyCH4III	ACNGT	8 cut(s)	88, 409, 418, 436, 650, 1259, 1927, 2129
HpyF10VI	GCNNNNNNNGC	8 cut(s)	201, 557, 719, 761, 863, 1232, 1698, 2582
HpyF3I	CTNAG	4 cut(s)	478, 862, 1263, 1362
Hsp92I	GRCGYC	2 cut(s)	1540, 2194
Hsp92II	CATG	8 cut(s)	580, 631, 662, 791, 904, 2020, 2414, 2760
HspAI	GCGC	4 cut(s)	204, 972, 1540, 2361
KasI	GGCGCC	1 cut(s)	1539
Kpn2I	TCCGGA	1 cut(s)	2656
KroI	GCCGGC	1 cut(s)	2727
KroNI	GCCGGC	1 cut(s)	2729
Ksp22I	TGATCA	1 cut(s)	1326
LguI	GCTCTTC	1 cut(s)	638
LmnI	GCTCC	5 cut(s)	311, 1015, 1500, 1552, 2635
Lsp1109I	GCAGC	4 cut(s)	326, 1985, 2189, 2350
LweI	GCATC	9 cut(s)	204, 773, 866, 1129, 1468, 2203, 2541, 2570, 2740
MaeIII	GTNAC	2 cut(s)	461, 1858
MfeI	CAATTG	1 cut(s)	263
MflI	RGATCY	3 cut(s)	911, 995, 2653
MhlI	GDGCHC	2 cut(s)	683, 2124
MlsI	TGGCCA	2 cut(s)	736, 1584
MluNI	TGGCCA	2 cut(s)	736, 1584
Mly113I	GGCGCC	1 cut(s)	1540
MlyI	GAGTC	4 cut(s)	830, 1373, 1838, 2042
MmeI	TCCRAC	8 cut(s)	35, 115, 265, 274, 340, 983, 1781, 1935
Mox20I	TGGCCA	2 cut(s)	736, 1584
Mph1103I	ATGCAT	1 cut(s)	1483
MroI	TCCGGA	1 cut(s)	2656
MroNI	GCCGGC	1 cut(s)	2727
MroXI	GAANNNNTTC	2 cut(s)	348, 954
MscI	TGGCCA	2 cut(s)	736, 1584
MseI	TTAA	9 cut(s)	90, 420, 450, 1247, 1830, 2010, 2208, 2289, 2784
MslI	CAYNNNNRTG	1 cut(s)	437
Msp20I	TGGCCA	2 cut(s)	736, 1584
MspA1I	CMGCKG	1 cut(s)	1617
MspCI	CTTAAG	1 cut(s)	2207
MspI	CCGG	6 cut(s)	278, 1543, 1657, 1977, 2657, 2728
MspR9I	CCNGG	5 cut(s)	546, 1657, 1724, 2582, 2598
MunI	CAATTG	1 cut(s)	263
MvaI	CCWGG	4 cut(s)	546, 1724, 2582, 2598
MvnI	CGCG	1 cut(s)	972
MwoI	GCNNNNNNNGC	8 cut(s)	201, 557, 719, 761, 863, 1232, 1698, 2582
NaeI	GCCGGC	1 cut(s)	2729
NarI	GGCGCC	1 cut(s)	1540
NciI	CCSGG	1 cut(s)	1657
NdeI	CATATG	1 cut(s)	319
NgoMIV	GCCGGC	1 cut(s)	2727
NheI	GCTAGC	1 cut(s)	776
NlaIII	CATG	8 cut(s)	580, 631, 662, 791, 904, 2020, 2414, 2760
NmeAIII	GCCGAG	1 cut(s)	1362
NmuCI	GTSAC	1 cut(s)	1858
NsiI	ATGCAT	1 cut(s)	1483
NspI	RCATGY	3 cut(s)	631, 904, 2414
OliI	CACNNNNGTG	1 cut(s)	437
PagI	TCATGA	1 cut(s)	658
PciSI	GCTCTTC	1 cut(s)	638
PdiI	GCCGGC	1 cut(s)	2729
PdmI	GAANNNNTTC	2 cut(s)	348, 954
PfeI	GAWTC	5 cut(s)	950, 1451, 2095, 2384, 2770
Pfl23II	CGTACG	1 cut(s)	2333
PkrI	GCNGC	5 cut(s)	316, 1619, 1975, 2204, 2365
PleI	GAGTC	4 cut(s)	829, 1372, 1838, 2041
PluTI	GGCGCC	1 cut(s)	1543
PpsI	GAGTC	4 cut(s)	829, 1372, 1838, 2041
PpuMI	RGGWCCY	2 cut(s)	506, 565
Psp5II	RGGWCCY	2 cut(s)	506, 565
Psp6I	CCWGG	4 cut(s)	544, 1722, 2580, 2596
PspEI	GGTNACC	1 cut(s)	1858
PspGI	CCWGG	4 cut(s)	544, 1722, 2580, 2596
PspLI	CGTACG	1 cut(s)	2333
PspOMI	GGGCCC	1 cut(s)	679
PspPI	GGNCC	8 cut(s)	183, 218, 506, 565, 679, 680, 1619, 2659
PspPPI	RGGWCCY	2 cut(s)	506, 565
PsuI	RGATCY	3 cut(s)	911, 995, 2653
RsaI	GTAC	7 cut(s)	386, 1261, 1376, 1835, 2335, 2453, 2526
RsaNI	GTAC	7 cut(s)	385, 1260, 1375, 1834, 2334, 2452, 2525
RseI	CAYNNNNRTG	1 cut(s)	437
SalI	GTCGAC	1 cut(s)	2020
SapI	GCTCTTC	1 cut(s)	638
SaqAI	TTAA	9 cut(s)	90, 420, 450, 1247, 1830, 2010, 2208, 2289, 2784
SatI	GCNGC	5 cut(s)	315, 1618, 1974, 2203, 2364
Sau96I	GGNCC	8 cut(s)	183, 218, 506, 565, 679, 680, 1619, 2659
ScaI	AGTACT	1 cut(s)	1376
SchI	GAGTC	4 cut(s)	830, 1373, 1838, 2042
ScrFI	CCNGG	5 cut(s)	546, 1657, 1724, 2582, 2598
SduI	GDGCHC	2 cut(s)	683, 2124
SfaNI	GCATC	9 cut(s)	204, 773, 866, 1129, 1468, 2203, 2541, 2570, 2740
SfcI	CTRYAG	1 cut(s)	1930
SfoI	GGCGCC	1 cut(s)	1541
SinI	GGWCC	4 cut(s)	183, 506, 565, 2659
SmiMI	CAYNNNNRTG	1 cut(s)	437
SmlI	CTYRAG	5 cut(s)	199, 1049, 1519, 1737, 2207
SmoI	CTYRAG	5 cut(s)	199, 1049, 1519, 1737, 2207
SpeI	ACTAGT	1 cut(s)	2422
SsiI	CCGC	4 cut(s)	144, 1235, 1617, 2250
SspDI	GGCGCC	1 cut(s)	1539
SspI	AATATT	1 cut(s)	518
StyD4I	CCNGG	5 cut(s)	544, 1655, 1722, 2580, 2596
StyI	CCWWGG	3 cut(s)	568, 923, 1498
TaaI	ACNGT	8 cut(s)	88, 409, 418, 436, 650, 1259, 1927, 2129
TaqI	TCGA	4 cut(s)	1134, 1489, 2021, 2391
TaqII	GACCGA	2 cut(s)	1877, 2039
TatI	WGTACW	4 cut(s)	1259, 1374, 1833, 2451
TauI	GCSGC	1 cut(s)	1620
TfiI	GAWTC	5 cut(s)	950, 1451, 2095, 2384, 2770
Tru1I	TTAA	9 cut(s)	90, 420, 450, 1247, 1830, 2010, 2208, 2289, 2784
Tru9I	TTAA	9 cut(s)	90, 420, 450, 1247, 1830, 2010, 2208, 2289, 2784
TscAI	CASTG	6 cut(s)	395, 439, 1180, 1930, 1972, 1988
TseFI	GTSAC	1 cut(s)	1858
TseI	GCWGC	4 cut(s)	314, 1973, 2202, 2363
Tsp45I	GTSAC	1 cut(s)	1858
TspGWI	ACGGA	4 cut(s)	696, 1814, 2028, 2720
TspRI	CASTG	6 cut(s)	395, 439, 1180, 1930, 1972, 1988
Vha464I	CTTAAG	1 cut(s)	2207
VpaK11BI	GGWCC	4 cut(s)	183, 506, 565, 2659
XapI	RAATTY	3 cut(s)	96, 2611, 2751
XbaI	TCTAGA	1 cut(s)	2686
XceI	RCATGY	3 cut(s)	631, 904, 2414
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2763
XmiI	GTMKAC	3 cut(s)	1776, 1929, 2021
XmnI	GAANNNNTTC	2 cut(s)	348, 954
ZrmI	AGTACT	1 cut(s)	1376
Zsp2I	ATGCAT	1 cut(s)	1483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.