Prupe.3G297600_v2.0.a1

membrane protein At3g27390-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
26399624 .. 26403151
3528 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G297600.1

Sequence Viewer

Length: 1779 bp
ATGGAACCCCCAAAGGGGGTGTTGGCTTCCTTGTGGAACTTTATCTGTTTTCTACCTTACTTCATTGGCCTTCTCCTTCGTGGCAACTTTAAAGGTATTCTGTTCTGCCCATTAATTTGCCTTATCATGACAATTGGAAACTCGGCTATCATATTGGGTCTTTGGCCGATACACTTTCTCTGGACTTATTATTGCATGTTTAGAGCTAAACGATATGGGCCAGCTCTGAAGATTGTTGTCTGCATATTTGTACTCCCCGTCCAATTGATCTTGTGGCCATTGGTTGGAATCGTTGGAAGTATTGTGGGTGGAGCAGCATATGGCTTTCTTTCACCAGTAATGGAAACTTTTCAAGCTGTTGGAGAAGGGAAGACCAATCAATTGTACCACTGCTTTTACGATGGAACTTGGAGCACCGTCCAAGGGTGCTTCACTGTTGTGAGGGATTTTGGGGATGTTTGTTACCACACATACTTCTCGGTTATGGATGACCTGAGAGAACAAGGTCCTCCATATGCAAAATATTATGAGATCCGGGATCAGGTGCTATATCTTCCTGGGGCTGTTATAATATCAGTCTTTGGTTTCATGGTTGATATGCCGGTGATCTCATGTATTGCCCTATGCAAATCCCCATACATGCTCTTCAAGGGGTGGCATCGTTTGTTTCATGACCTTATAGGTCGGGAGGGCCCTTTTTTGGAAACAATATGTGTTCCATTTGCAGGTCTTGCTATCCTACTCTGGCCGTTGGCTGTTGTAGGGGCAGTGCTGGGATCAATGGTGGCCAGTATCTTTCTTGGTGCTTTTGCTGGAGTGGTTGTTTATCAGGAGTCCTCATTTTGGTTGGGGCTATGCTATATCATTGCATCCTTGTCGATATATGATGAATACAGCAATGATATCCTTGACATGCCAGAAGGATCCTGCTTTCCAAGGCCAAACTACCGAAAGAAGGCCAAATTGGTCCGAACCAATTCTCGTGGATCCTCTTTCTCAAGGCCCGGCTCCTTCCGAAGTGTTCCCTCCCGCTCGGTTTCATTCACTAATCCTATCACTGAGTTGAATCCCCTTGAGCTAATGGATAGCTTATTTAAGGAGTGTAAACATCATGGGGAAATCATGGTTTCTGAAGGAATAATTACACTTCAAGACATTGAAGATGCTAAGTCCAGTAAAGGGAGCAGAGTTATAAGCATTGGCTTACCAGCTTATTGCCTTCTTCAAGCACTTCTGCGATCTGCAAAAGCAAATTCGGTGGGCATATTGTTAAGTGACAATGTTACTGAGTTGACTAGTTCAAACAGACCAAAAGAAACATTCTTTGATTGGTTTTTCAATCCGTTGTTGATCATCAAGGACCAGATAAAAGCAGAAAACCTTTCTGAAGCAGAAGAGGCCTACCTTTGCAAGTTAGTTCTGTTGAATGGTGATCCTTTGAGGTTGAAAAACTCAAACATTGGCTCAGCACCTGAATCCGAGCGTAAACAGGCTGAACTTGATGCATTTGCTCGAAGGCTCCAAGGTATCACTAAGTCTATCTCAAGGTATCCAACTTTTAGGCGTCGATTTGAGAATCTTGTGAATGCCATAGCTGATGATCTTGCCCAGAATGATGGTAGCAGCAAACCAACCGATGGACCAAAAACAATTCCAAGATCAAAGAGTGCCTTTGCCCGATTGTTCAGCCAGAAATCTTTTAGTTTTACAAACAAAACAAGCAATCATGGGTATGATCCAGAGTCACAAACAGTTGTAAATGATGTGACAATCACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

593

Amino Acids

66.05

Weight (kDa)

8.22

Isoelectric Point (pI)

43.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 569, 1193
Acc36I ACCTGC 1 cut(s) 716
AccB7I CCANNNNNTGG 2 cut(s) 284, 1637
AccBSI CCGCTC 1 cut(s) 1032
AciI CCGC 1 cut(s) 1030
AclWI GGATC 9 cut(s) 526, 546, 784, 918, 931, 981, 994, 1427, 1730
AcoI YGGCCR 4 cut(s) 164, 275, 746, 786
AcsI RAATTY 1 cut(s) 1252
AcuI CTGAAG 3 cut(s) 248, 1152, 1407
AcyI GRCGYC 1 cut(s) 1564
AfaI GTAC 2 cut(s) 252, 386
AhlI ACTAGT 1 cut(s) 1295
AjnI CCWGG 1 cut(s) 556
AjuI GAANNNNNNNTTGG 2 cut(s) 947, 979
AleI CACNNNNGTG 1 cut(s) 437
AluBI AGCT 7 cut(s) 206, 224, 356, 1078, 1089, 1211, 1595
AluI AGCT 7 cut(s) 206, 224, 356, 1078, 1089, 1211, 1595
Alw21I GWGCWC 1 cut(s) 416
AlwI GGATC 9 cut(s) 526, 546, 784, 918, 931, 981, 994, 1427, 1730
AlwNI CAGNNNCTG 1 cut(s) 1472
ApaI GGGCCC 1 cut(s) 695
ApeKI GCWGC 2 cut(s) 314, 1623
ApoI RAATTY 1 cut(s) 1252
AseI ATTAAT 1 cut(s) 113
Asp700I GAANNNNTTC 2 cut(s) 348, 976
AspS9I GGNCC 8 cut(s) 218, 506, 691, 692, 967, 1002, 1360, 1640
AsuC2I CCSGG 2 cut(s) 536, 1005
AsuHPI GGTGA 3 cut(s) 324, 616, 1442
AvaII GGWCC 4 cut(s) 506, 967, 1360, 1640
BaeGI GKGCMC 1 cut(s) 695
BalI TGGCCA 2 cut(s) 277, 788
BamHI GGATCC 2 cut(s) 923, 986
BanII GRGCYC 1 cut(s) 695
BauI CACGAG 1 cut(s) 981
BbsI GAAGAC 1 cut(s) 377
Bbv12I GWGCWC 1 cut(s) 416
BbvI GCAGC 2 cut(s) 326, 1635
BccI CCATC 3 cut(s) 395, 1610, 1631
BceAI ACGGC 1 cut(s) 733
BcgI CGANNNNNNTGC 2 cut(s) 858, 892
BciT130I CCWGG 1 cut(s) 558
BciVI GTATCC 1 cut(s) 1560
BclI TGATCA 1 cut(s) 1350
BcnI CCSGG 2 cut(s) 536, 1005
BcuI ACTAGT 1 cut(s) 1295
BfaI CTAG 1 cut(s) 1296
BfuAI ACCTGC 1 cut(s) 716
BfuI GTATCC 1 cut(s) 1560
BisI GCNGC 2 cut(s) 315, 1624
BlpI GCTNAGC 1 cut(s) 1465
BlsI GCNGC 2 cut(s) 316, 1625
Bme1390I CCNGG 3 cut(s) 536, 558, 1005
Bme18I GGWCC 4 cut(s) 506, 967, 1360, 1640
BmgT120I GGNCC 8 cut(s) 218, 506, 691, 692, 967, 1002, 1360, 1640
BmiI GGNNCC 6 cut(s) 6, 693, 925, 988, 1009, 1520
BmrFI CCNGG 3 cut(s) 536, 558, 1005
BmsI GCATC 4 cut(s) 667, 878, 1153, 1492
BpiI GAAGAC 1 cut(s) 377
BpmI CTGGAG 1 cut(s) 834
Bpu1102I GCTNAGC 1 cut(s) 1465
BpuEI CTTGAG 3 cut(s) 982, 1094, 1528
BpuMI CCSGG 2 cut(s) 536, 1005
BsaHI GRCGYC 1 cut(s) 1564
BsaJI CCNNGG 4 cut(s) 421, 557, 935, 1522
BsaXI ACNNNNNCTCC 2 cut(s) 807, 837
Bse118I RCCGGY 1 cut(s) 601
Bse1I ACTGG 3 cut(s) 335, 789, 1173
Bse3DI GCAATG 2 cut(s) 864, 904
BseBI CCWGG 1 cut(s) 558
BseDI CCNNGG 4 cut(s) 421, 557, 935, 1522
BseGI GGATG 3 cut(s) 460, 493, 869
BseMI GCAATG 2 cut(s) 864, 904
BseMII CTCAG 4 cut(s) 485, 1050, 1278, 1479
BseNI ACTGG 3 cut(s) 335, 789, 1173
BseSI GKGCMC 1 cut(s) 695
BseXI GCAGC 2 cut(s) 326, 1635
BseYI CCCAGC 1 cut(s) 772
BsiHKAI GWGCWC 1 cut(s) 416
BsiSI CCGG 3 cut(s) 535, 602, 1005
BsmI GAATGC 1 cut(s) 1591
Bsp120I GGGCCC 1 cut(s) 691
Bsp1286I GDGCHC 2 cut(s) 416, 695
Bsp1720I GCTNAGC 1 cut(s) 1465
BspACI CCGC 1 cut(s) 1030
BspCNI CTCAG 4 cut(s) 486, 1051, 1279, 1478
BspHI TCATGA 2 cut(s) 126, 670
BspLI GGNNCC 6 cut(s) 6, 693, 925, 988, 1009, 1520
BspMI ACCTGC 1 cut(s) 716
BspPI GGATC 9 cut(s) 526, 546, 784, 918, 931, 981, 994, 1427, 1730
BspQI GCTCTTC 1 cut(s) 650
BsrBI CCGCTC 1 cut(s) 1032
BsrDI GCAATG 2 cut(s) 864, 904
BsrFI RCCGGY 1 cut(s) 601
BsrI ACTGG 3 cut(s) 335, 789, 1173
BssAI RCCGGY 1 cut(s) 601
BssECI CCNNGG 4 cut(s) 421, 557, 935, 1522
BssNI GRCGYC 1 cut(s) 1564
BssSI CACGAG 1 cut(s) 981
BssT1I CCWWGG 3 cut(s) 421, 935, 1522
Bst2BI CACGAG 1 cut(s) 981
Bst2UI CCWGG 1 cut(s) 558
Bst4CI ACNGT 3 cut(s) 418, 436, 1753
Bst6I CTCTTC 2 cut(s) 650, 1389
BstACI GRCGYC 1 cut(s) 1564
BstAPI GCANNNNNTGC 1 cut(s) 731
BstC8I GCNNGC 1 cut(s) 222
BstDEI CTNAG 6 cut(s) 494, 1059, 1167, 1287, 1465, 1533
BstF5I GGATG 3 cut(s) 460, 493, 869
BstMWI GCNNNNNNNGC 2 cut(s) 731, 1397
BstNI CCWGG 1 cut(s) 558
BstNSI RCATGY 3 cut(s) 199, 643, 916
BstSCI CCNGG 3 cut(s) 534, 556, 1003
BstSLI GKGCMC 1 cut(s) 695
BstV1I GCAGC 2 cut(s) 326, 1635
BstV2I GAAGAC 1 cut(s) 377
BstX2I RGATCY 3 cut(s) 531, 923, 986
BstXI CCANNNNNNTGG 1 cut(s) 1616
BstYI RGATCY 3 cut(s) 531, 923, 986
BsuI GTATCC 1 cut(s) 1560
BtsCI GGATG 3 cut(s) 460, 493, 869
BtsI GCAGTG 2 cut(s) 388, 774
BtsIMutI CAGTG 4 cut(s) 388, 432, 774, 1056
BveI ACCTGC 1 cut(s) 716
Cac8I GCNNGC 1 cut(s) 222
CaiI CAGNNNCTG 1 cut(s) 1472
CciI TCATGA 2 cut(s) 126, 670
Cfr10I RCCGGY 1 cut(s) 601
Cfr13I GGNCC 8 cut(s) 218, 506, 691, 692, 967, 1002, 1360, 1640
CseI GACGC 1 cut(s) 1553
Csp6I GTAC 2 cut(s) 251, 385
CspCI CAANNNNNGTGG 4 cut(s) 964, 999, 1239, 1274
CviQI GTAC 2 cut(s) 251, 385
DdeI CTNAG 6 cut(s) 494, 1059, 1167, 1287, 1465, 1533
DraI TTTAAA 1 cut(s) 91
EaeI YGGCCR 4 cut(s) 164, 275, 746, 786
Eam1104I CTCTTC 2 cut(s) 650, 1389
EarI CTCTTC 2 cut(s) 650, 1389
Eco130I CCWWGG 3 cut(s) 421, 935, 1522
Eco147I AGGCCT 1 cut(s) 1400
Eco24I GRGCYC 1 cut(s) 695
Eco32I GATATC 1 cut(s) 904
Eco47I GGWCC 4 cut(s) 506, 967, 1360, 1640
Eco57I CTGAAG 3 cut(s) 248, 1152, 1407
EcoO109I RGGNCCY 3 cut(s) 506, 691, 692
EcoRII CCWGG 1 cut(s) 556
EcoRV GATATC 1 cut(s) 904
EcoT14I CCWWGG 3 cut(s) 421, 935, 1522
EcoT22I ATGCAT 1 cut(s) 1507
EcoT38I GRGCYC 1 cut(s) 695
ErhI CCWWGG 3 cut(s) 421, 935, 1522
FalI AAGNNNNNCTT 2 cut(s) 1655, 1687
FauI CCCGC 1 cut(s) 1037
FauNDI CATATG 2 cut(s) 319, 514
FbaI TGATCA 1 cut(s) 1350
Fnu4HI GCNGC 2 cut(s) 315, 1624
FokI GGATG 3 cut(s) 467, 500, 856
FriOI GRGCYC 1 cut(s) 695
Fsp4HI GCNGC 2 cut(s) 315, 1624
FspBI CTAG 1 cut(s) 1296
GluI GCNGC 2 cut(s) 315, 1624
GsaI CCCAGC 1 cut(s) 776
GsuI CTGGAG 1 cut(s) 834
HapII CCGG 3 cut(s) 535, 602, 1005
HgaI GACGC 1 cut(s) 1553
Hin1I GRCGYC 1 cut(s) 1564
HincII GTYRAC 1 cut(s) 1293
HindII GTYRAC 1 cut(s) 1293
HinfI GANTC 6 cut(s) 288, 833, 1066, 1475, 1576, 1742
HpaII CCGG 3 cut(s) 535, 602, 1005
HphI GGTGA 3 cut(s) 324, 616, 1442
Hpy166II GTNNAC 3 cut(s) 1106, 1293, 1487
Hpy188I TCNGA 6 cut(s) 228, 971, 1016, 1132, 1387, 1480
Hpy188III TCNNGA 7 cut(s) 127, 181, 671, 686, 830, 1151, 1739
Hpy8I GTNNAC 3 cut(s) 1106, 1293, 1487
Hpy99I CGWCG 1 cut(s) 1569
HpyAV CCTTC 9 cut(s) 80, 86, 359, 914, 949, 1021, 1127, 1229, 1509
HpyCH4III ACNGT 3 cut(s) 418, 436, 1753
HpyCH4V TGCA 9 cut(s) 195, 243, 518, 627, 725, 869, 1244, 1410, 1505
HpyF10VI GCNNNNNNNGC 2 cut(s) 731, 1397
HpyF3I CTNAG 6 cut(s) 494, 1059, 1167, 1287, 1465, 1533
Hsp92I GRCGYC 1 cut(s) 1564
Ksp22I TGATCA 1 cut(s) 1350
LguI GCTCTTC 1 cut(s) 650
LmnI GCTCC 5 cut(s) 311, 411, 1013, 1182, 1524
Lsp1109I GCAGC 2 cut(s) 326, 1635
LweI GCATC 4 cut(s) 667, 878, 1153, 1492
MaeI CTAG 1 cut(s) 1296
MaeIII GTNAC 5 cut(s) 461, 1274, 1282, 1743, 1765
MbiI CCGCTC 1 cut(s) 1032
MboII GAAGA 7 cut(s) 241, 382, 545, 637, 1172, 1214, 1406
MfeI CAATTG 3 cut(s) 132, 263, 380
MflI RGATCY 3 cut(s) 531, 923, 986
MhlI GDGCHC 2 cut(s) 416, 695
MlsI TGGCCA 2 cut(s) 277, 788
MluCI AATT 9 cut(s) 114, 132, 263, 380, 962, 976, 1140, 1252, 1650
MluNI TGGCCA 2 cut(s) 277, 788
MlyI GAGTC 2 cut(s) 842, 1751
MmeI TCCRAC 4 cut(s) 265, 274, 340, 1577
MnlI CCTC 8 cut(s) 435, 519, 682, 847, 1000, 1036, 1390, 1434
Mox20I TGGCCA 2 cut(s) 277, 788
Mph1103I ATGCAT 1 cut(s) 1507
MroXI GAANNNNTTC 2 cut(s) 348, 976
MscI TGGCCA 2 cut(s) 277, 788
MseI TTAA 4 cut(s) 90, 113, 1095, 1271
MslI CAYNNNNRTG 2 cut(s) 437, 1731
Msp20I TGGCCA 2 cut(s) 277, 788
MspI CCGG 3 cut(s) 535, 602, 1005
MspR9I CCNGG 3 cut(s) 536, 558, 1005
MunI CAATTG 3 cut(s) 132, 263, 380
Mva1269I GAATGC 1 cut(s) 1591
MvaI CCWGG 1 cut(s) 558
MwoI GCNNNNNNNGC 2 cut(s) 731, 1397
NciI CCSGG 2 cut(s) 536, 1005
NdeI CATATG 2 cut(s) 319, 514
NlaIV GGNNCC 6 cut(s) 6, 693, 925, 988, 1009, 1520
NmeAIII GCCGAG 1 cut(s) 122
NmuCI GTSAC 3 cut(s) 1274, 1743, 1765
NsiI ATGCAT 1 cut(s) 1507
NspI RCATGY 3 cut(s) 199, 643, 916
OliI CACNNNNGTG 1 cut(s) 437
PagI TCATGA 2 cut(s) 126, 670
PceI AGGCCT 1 cut(s) 1400
PciSI GCTCTTC 1 cut(s) 650
PctI GAATGC 1 cut(s) 1591
PdmI GAANNNNTTC 2 cut(s) 348, 976
PfeI GAWTC 4 cut(s) 288, 1066, 1475, 1576
PflMI CCANNNNNTGG 2 cut(s) 284, 1637
PfoI TCCNGGA 1 cut(s) 534
PkrI GCNGC 2 cut(s) 316, 1625
PleI GAGTC 2 cut(s) 841, 1750
PpsI GAGTC 2 cut(s) 841, 1750
PpuMI RGGWCCY 1 cut(s) 506
PshBI ATTAAT 1 cut(s) 113
PsiI TTATAA 2 cut(s) 569, 1193
Psp5II RGGWCCY 1 cut(s) 506
Psp6I CCWGG 1 cut(s) 556
PspFI CCCAGC 1 cut(s) 772
PspGI CCWGG 1 cut(s) 556
PspN4I GGNNCC 6 cut(s) 6, 693, 925, 988, 1009, 1520
PspOMI GGGCCC 1 cut(s) 691
PspPI GGNCC 8 cut(s) 218, 506, 691, 692, 967, 1002, 1360, 1640
PspPPI RGGWCCY 1 cut(s) 506
PstNI CAGNNNCTG 1 cut(s) 1472
PsuI RGATCY 3 cut(s) 531, 923, 986
RsaI GTAC 2 cut(s) 252, 386
RsaNI GTAC 2 cut(s) 251, 385
RseI CAYNNNNRTG 2 cut(s) 437, 1731
SapI GCTCTTC 1 cut(s) 650
SaqAI TTAA 4 cut(s) 90, 113, 1095, 1271
SatI GCNGC 2 cut(s) 315, 1624
Sau96I GGNCC 8 cut(s) 218, 506, 691, 692, 967, 1002, 1360, 1640
SchI GAGTC 2 cut(s) 842, 1751
ScrFI CCNGG 3 cut(s) 536, 558, 1005
SduI GDGCHC 2 cut(s) 416, 695
SfaNI GCATC 4 cut(s) 667, 878, 1153, 1492
SinI GGWCC 4 cut(s) 506, 967, 1360, 1640
SmiMI CAYNNNNRTG 2 cut(s) 437, 1731
SmlI CTYRAG 3 cut(s) 997, 1073, 1543
SmoI CTYRAG 3 cut(s) 997, 1073, 1543
SpeI ACTAGT 1 cut(s) 1295
Sse9I AATT 9 cut(s) 114, 132, 263, 380, 962, 976, 1140, 1252, 1650
SseBI AGGCCT 1 cut(s) 1400
SsiI CCGC 1 cut(s) 1030
SspI AATATT 1 cut(s) 524
SspMI CTAG 1 cut(s) 1296
StuI AGGCCT 1 cut(s) 1400
StyD4I CCNGG 3 cut(s) 534, 556, 1003
StyI CCWWGG 3 cut(s) 421, 935, 1522
TaaI ACNGT 3 cut(s) 418, 436, 1753
TaqI TCGA 3 cut(s) 878, 1513, 1567
TasI AATT 9 cut(s) 114, 132, 263, 380, 962, 976, 1140, 1252, 1650
TatI WGTACW 1 cut(s) 250
TfiI GAWTC 4 cut(s) 288, 1066, 1475, 1576
Tru1I TTAA 4 cut(s) 90, 113, 1095, 1271
Tru9I TTAA 4 cut(s) 90, 113, 1095, 1271
TscAI CASTG 4 cut(s) 395, 439, 774, 1063
TseFI GTSAC 3 cut(s) 1274, 1743, 1765
TseI GCWGC 2 cut(s) 314, 1623
Tsp45I GTSAC 3 cut(s) 1274, 1743, 1765
TspDTI ATGAA 5 cut(s) 52, 577, 659, 903, 1029
TspGWI ACGGA 1 cut(s) 1332
TspRI CASTG 4 cut(s) 395, 439, 774, 1063
Van91I CCANNNNNTGG 2 cut(s) 284, 1637
VpaK11BI GGWCC 4 cut(s) 506, 967, 1360, 1640
VspI ATTAAT 1 cut(s) 113
XapI RAATTY 1 cut(s) 1252
XceI RCATGY 3 cut(s) 199, 643, 916
XmnI GAANNNNTTC 2 cut(s) 348, 976
XspI CTAG 1 cut(s) 1296
Zsp2I ATGCAT 1 cut(s) 1507
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.