Prupe.3G302200_v2.0.a1

Kelch repeat-containing protein At3g27220-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
26624508 .. 26627737
3230 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G302200.1

Sequence Viewer

Length: 1290 bp
ATGTCCAGGTTTACCCAACATCACACTCATTCTTCTTCTGCTGCAAAATGGGTATTTCTCACATCTTGCGCATGTCTGCTCGGAGGTGCCCTCGTTGCAGATTTTCTTTGGGCTTCTTCTTCCTATTCTTCTTCTGCCTATTCCTTCATTTCTTCCAATTTGGCGCTTGACAAATCTGGGGCCTTGGTTGTACCAAATGTCACCGCCAATGAAGCTGACCAGAAAGGAAGTTTCAAAGACAAAAAGGAACATGCTTCGGAGAGATTATTATCTGGAACTTTTGCAGATATATCTGCACCTGAGTTACCATGGGAGAATATGACGCCCGCACCGGTGCCTCGTCTCGATGGCTCTTCAATACAGATTAAGAATATATTTTACGTGTTTGCAGGATATGGCACAATTGACCATGTGCACTCTCATGTTGATGTATACAATTTCACTGACAATACATGGGGGGAAAGATTGGATATCCCAAAAGAGATGGCGCATTCGCATTTAGGAGTGGCCACTGATGGAAGATACATATATGTGGTATCAGGACAATATGGTCCCCAATGCAGAGGGCCTACAGCTCGTATATTTGTGCTGGACACAGAGACAAAGAAATGGAGCAGTATGCTTCCATTGCCTTCCCCCAGGTATGCTCCAGCAACTCAATTGTGGAGAGGCAGACTCCATGTAATGGGCGGCAGCAAAGAAAACCGCCATACGCCTAGTGTGGATCACTGGAGTATTGCTGTGAAGGACGGCAAAGCATTGGAGAAAGAGTGGCGGAAAGAAGCACCCATTCCCCATGGGGGACCACATAGGGCTTGTGTTGTGATGAATGATCGCCTCTTTCTTATTGGTGGTCAGGAGGGTGATTTTATGCCCAAGCCTGGGTCACCAATTTTCAAATGTTCACGTAGGCATGAGGTGGTTTACGGGGATGCTTATATGCTGGATGGTGAAATGAAATGGAAAGTGTTGCCTCCCATGCCAAAACCCAACTCTCACATAGAGTGTTCTTGGGTAATTGTCAACAATTCAATTATCATTGCTGGAGGTACAACAGAAAAGAACCCAGTGACCAAAAGGATGATCCTTGTTGGGGAGGTTTTCCGGTTCCAAGTGGACTCCATGACTTGGTCGGTGATCGGAAGGCTTCCCTACCGAGTGAAAACGACATTAACCGGTTTCTGGAACGGTTACTTGTATTTTACATCTGGGCAGCGGGACAGAGGACCAGAGAATCCACAGCCAAGACAGGTCGTCGGAGATATGTTTAGAACCAAGCTGAATTTGTAG

Protein Analysis

430

Amino Acids

47.93

Weight (kDa)

9.05

Isoelectric Point (pI)

32.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013906)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G27220
fragaria_vesca FvH4_6g52971
malus_domestica MD17G1015900.v1.1
prunus_persica Prupe.3G302200_v2.0.a1
pyrus_communis pycom17g01280
rosa_chinensis RchiOBHm_Chr2g0174691
rosa_laevigata RLG00000022286
rosa_multiflora Rmu_co8519899.1_g000001 Rmu_sc0007189.1_g000001
rosa_roxburghii Rroxscaffold_2G00077930
rosa_rugosa Rorug02G0578800 Rorug02G0578900
rosa_samantha Rh2AG660100 Rh2BG671000 Rh2CG634200 Rh2DG684600
rosa_wichuraiana Rw2G054070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 549
Acc16I TGCGCA 1 cut(s) 70
AccB1I GGYRCC 2 cut(s) 86, 334
AccB7I CCANNNNNTGG 2 cut(s) 685, 1128
AccI GTMKAC 1 cut(s) 432
AciI CCGC 6 cut(s) 204, 327, 690, 706, 775, 1216
AclWI GGATC 2 cut(s) 732, 1078
AcoI YGGCCR 1 cut(s) 507
AcsI RAATTY 1 cut(s) 1282
AcyI GRCGYC 1 cut(s) 323
AfaI GTAC 2 cut(s) 192, 1051
AfiI CCNNNNNNNGG 7 cut(s) 685, 800, 881, 882, 1093, 1128, 1182
AflIII ACRYGT 1 cut(s) 381
AgeI ACCGGT 2 cut(s) 331, 1175
AgsI TTSAA 4 cut(s) 235, 357, 898, 1032
AhdI GACNNNNNGTC 1 cut(s) 1253
AjnI CCWGG 3 cut(s) 5, 638, 880
AluBI AGCT 3 cut(s) 215, 575, 1279
AluI AGCT 3 cut(s) 215, 575, 1279
Alw21I GWGCWC 1 cut(s) 417
Alw26I GTCTC 2 cut(s) 347, 593
Alw44I GTGCAC 1 cut(s) 413
AlwI GGATC 2 cut(s) 732, 1078
AoxI GGCC 3 cut(s) 180, 507, 566
ApaLI GTGCAC 1 cut(s) 413
ApeKI GCWGC 3 cut(s) 41, 693, 1213
ApoI RAATTY 1 cut(s) 1282
AsiGI ACCGGT 2 cut(s) 331, 1175
AspLEI GCGC 3 cut(s) 71, 166, 490
AspS9I GGNCC 5 cut(s) 180, 551, 566, 803, 1226
AsuHPI GGTGA 5 cut(s) 193, 875, 879, 962, 1147
AvaII GGWCC 3 cut(s) 551, 803, 1226
BaeGI GKGCMC 2 cut(s) 91, 417
BalI TGGCCA 1 cut(s) 509
BanI GGYRCC 2 cut(s) 86, 334
Bbv12I GWGCWC 1 cut(s) 417
BbvI GCAGC 3 cut(s) 28, 705, 1225
BccI CCATC 4 cut(s) 341, 478, 509, 941
BceAI ACGGC 1 cut(s) 766
BciT130I CCWGG 3 cut(s) 7, 640, 882
BcoDI GTCTC 2 cut(s) 347, 593
BfaI CTAG 1 cut(s) 717
BfmI CTRYAG 1 cut(s) 570
BfoI RGCGCY 1 cut(s) 167
BisI GCNGC 4 cut(s) 42, 691, 694, 1214
BlsI GCNGC 4 cut(s) 43, 692, 695, 1215
Bme1390I CCNGG 3 cut(s) 7, 640, 882
Bme18I GGWCC 3 cut(s) 551, 803, 1226
BmeRI GACNNNNNGTC 1 cut(s) 1253
BmgT120I GGNCC 5 cut(s) 180, 551, 566, 803, 1226
BmiI GGNNCC 6 cut(s) 88, 181, 336, 553, 804, 1109
BmrFI CCNGG 3 cut(s) 7, 640, 882
BmrI ACTGGG 1 cut(s) 1061
BmsI GCATC 1 cut(s) 922
BmuI ACTGGG 1 cut(s) 1061
BplI GAGNNNNNCTC 4 cut(s) 75, 107, 660, 692
BpmI CTGGAG 3 cut(s) 633, 751, 1065
BsaAI YACGTR 2 cut(s) 382, 908
BsaBI GATNNNNATC 1 cut(s) 268
BsaHI GRCGYC 1 cut(s) 323
BsaJI CCNNGG 5 cut(s) 183, 308, 638, 796, 881
BsaWI WCCGGW 3 cut(s) 331, 1104, 1175
BsaXI ACNNNNNCTCC 2 cut(s) 755, 785
Bsc4I CCNNNNNNNGG 7 cut(s) 685, 800, 881, 882, 1093, 1128, 1182
Bse118I RCCGGY 2 cut(s) 331, 1175
Bse1I ACTGG 2 cut(s) 734, 1067
Bse3DI GCAATG 2 cut(s) 626, 1038
Bse8I GATNNNNATC 1 cut(s) 268
BseBI CCWGG 3 cut(s) 7, 640, 882
BseDI CCNNGG 5 cut(s) 183, 308, 638, 796, 881
BseGI GGATG 3 cut(s) 937, 952, 1086
BseJI GATNNNNATC 1 cut(s) 268
BseLI CCNNNNNNNGG 7 cut(s) 685, 800, 881, 882, 1093, 1128, 1182
BseMI GCAATG 2 cut(s) 626, 1038
BseMII CTCAG 1 cut(s) 291
BseNI ACTGG 2 cut(s) 734, 1067
BseSI GKGCMC 2 cut(s) 91, 417
BseXI GCAGC 3 cut(s) 28, 705, 1225
BsgI GTGCAG 1 cut(s) 279
BshFI GGCC 3 cut(s) 182, 509, 568
BshNI GGYRCC 2 cut(s) 86, 334
BshTI ACCGGT 2 cut(s) 331, 1175
BsiHKAI GWGCWC 1 cut(s) 417
BsiSI CCGG 3 cut(s) 332, 1105, 1176
BslFI GGGAC 3 cut(s) 537, 816, 1232
BslI CCNNNNNNNGG 7 cut(s) 685, 800, 881, 882, 1093, 1128, 1182
BsmAI GTCTC 2 cut(s) 347, 593
BsmBI CGTCTC 1 cut(s) 347
BsmFI GGGAC 3 cut(s) 537, 816, 1232
BsmI GAATGC 1 cut(s) 490
BsnI GGCC 3 cut(s) 182, 509, 568
Bsp1286I GDGCHC 2 cut(s) 91, 417
Bsp143I GATC 4 cut(s) 724, 832, 1083, 1137
Bsp19I CCATGG 2 cut(s) 308, 796
BspACI CCGC 6 cut(s) 204, 327, 690, 706, 775, 1216
BspANI GGCC 3 cut(s) 182, 509, 568
BspCNI CTCAG 1 cut(s) 292
BspLI GGNNCC 6 cut(s) 88, 181, 336, 553, 804, 1109
BspPI GGATC 2 cut(s) 732, 1078
BspQI GCTCTTC 1 cut(s) 358
BspT107I GGYRCC 2 cut(s) 86, 334
BsrDI GCAATG 2 cut(s) 626, 1038
BsrFI RCCGGY 2 cut(s) 331, 1175
BsrI ACTGG 2 cut(s) 734, 1067
BssAI RCCGGY 2 cut(s) 331, 1175
BssECI CCNNGG 5 cut(s) 183, 308, 638, 796, 881
BssMI GATC 4 cut(s) 724, 832, 1083, 1137
BssNAI GTATAC 1 cut(s) 433
BssNI GRCGYC 1 cut(s) 323
BssT1I CCWWGG 3 cut(s) 183, 308, 796
Bst1107I GTATAC 1 cut(s) 433
Bst2UI CCWGG 3 cut(s) 7, 640, 882
Bst4CI ACNGT 1 cut(s) 1190
Bst6I CTCTTC 1 cut(s) 358
BstACI GRCGYC 1 cut(s) 323
BstBAI YACGTR 2 cut(s) 382, 908
BstC8I GCNNGC 1 cut(s) 327
BstDEI CTNAG 1 cut(s) 300
BstDSI CCRYGG 2 cut(s) 308, 796
BstEII GGTNACC 1 cut(s) 885
BstF5I GGATG 3 cut(s) 937, 952, 1086
BstH2I RGCGCY 1 cut(s) 167
BstHHI GCGC 3 cut(s) 71, 166, 490
BstKTI GATC 4 cut(s) 727, 835, 1086, 1140
BstMAI GTCTC 2 cut(s) 347, 593
BstMBI GATC 4 cut(s) 724, 832, 1083, 1137
BstMWI GCNNNNNNNGC 4 cut(s) 95, 212, 628, 979
BstNI CCWGG 3 cut(s) 7, 640, 882
BstNSI RCATGY 2 cut(s) 75, 254
BstPI GGTNACC 1 cut(s) 885
BstSCI CCNGG 3 cut(s) 5, 638, 880
BstSFI CTRYAG 1 cut(s) 570
BstSLI GKGCMC 2 cut(s) 91, 417
BstV1I GCAGC 3 cut(s) 28, 705, 1225
BstZ17I GTATAC 1 cut(s) 433
BsuRI GGCC 3 cut(s) 182, 509, 568
BtgI CCRYGG 2 cut(s) 308, 796
BtsCI GGATG 3 cut(s) 937, 952, 1086
BtsIMutI CAGTG 4 cut(s) 441, 510, 727, 1074
Cac8I GCNNGC 1 cut(s) 327
CfoI GCGC 3 cut(s) 71, 166, 490
Cfr10I RCCGGY 2 cut(s) 331, 1175
Cfr13I GGNCC 5 cut(s) 180, 551, 566, 803, 1226
CseI GACGC 1 cut(s) 331
Csp6I GTAC 2 cut(s) 191, 1050
CspAI ACCGGT 2 cut(s) 331, 1175
CviQI GTAC 2 cut(s) 191, 1050
DdeI CTNAG 1 cut(s) 300
DpnI GATC 4 cut(s) 726, 834, 1085, 1139
DpnII GATC 4 cut(s) 724, 832, 1083, 1137
DrdI GACNNNNNNGTC 1 cut(s) 549
DriI GACNNNNNGTC 1 cut(s) 1253
DseDI GACNNNNNNGTC 1 cut(s) 549
EaeI YGGCCR 1 cut(s) 507
Eam1104I CTCTTC 1 cut(s) 358
Eam1105I GACNNNNNGTC 1 cut(s) 1253
EarI CTCTTC 1 cut(s) 358
EciI GGCGGA 1 cut(s) 790
Eco130I CCWWGG 3 cut(s) 183, 308, 796
Eco32I GATATC 1 cut(s) 472
Eco47I GGWCC 3 cut(s) 551, 803, 1226
Eco91I GGTNACC 1 cut(s) 885
EcoO109I RGGNCCY 2 cut(s) 180, 566
EcoO65I GGTNACC 1 cut(s) 885
EcoRII CCWGG 3 cut(s) 5, 638, 880
EcoRV GATATC 1 cut(s) 472
EcoT14I CCWWGG 3 cut(s) 183, 308, 796
ErhI CCWWGG 3 cut(s) 183, 308, 796
Esp3I CGTCTC 1 cut(s) 347
FaqI GGGAC 3 cut(s) 537, 816, 1232
FauI CCCGC 2 cut(s) 334, 1209
FblI GTMKAC 1 cut(s) 432
Fnu4HI GCNGC 4 cut(s) 42, 691, 694, 1214
FokI GGATG 3 cut(s) 944, 959, 1093
Fsp4HI GCNGC 4 cut(s) 42, 691, 694, 1214
FspBI CTAG 1 cut(s) 717
FspI TGCGCA 1 cut(s) 70
GlaI GCGC 3 cut(s) 70, 165, 489
GluI GCNGC 4 cut(s) 42, 691, 694, 1214
GsuI CTGGAG 3 cut(s) 633, 751, 1065
HaeII RGCGCY 1 cut(s) 167
HaeIII GGCC 3 cut(s) 182, 509, 568
HapII CCGG 3 cut(s) 332, 1105, 1176
HgaI GACGC 1 cut(s) 331
HhaI GCGC 3 cut(s) 71, 166, 490
Hin1I GRCGYC 1 cut(s) 323
Hin6I GCGC 3 cut(s) 69, 164, 488
HinP1I GCGC 3 cut(s) 69, 164, 488
HincII GTYRAC 1 cut(s) 1024
HindII GTYRAC 1 cut(s) 1024
HinfI GANTC 3 cut(s) 675, 1118, 1234
HpaII CCGG 3 cut(s) 332, 1105, 1176
HphI GGTGA 5 cut(s) 193, 875, 879, 962, 1147
Hpy166II GTNNAC 7 cut(s) 12, 415, 433, 905, 925, 1024, 1117
Hpy188I TCNGA 4 cut(s) 83, 259, 1142, 1259
Hpy188III TCNNGA 5 cut(s) 273, 344, 540, 857, 1183
Hpy8I GTNNAC 7 cut(s) 12, 415, 433, 905, 925, 1024, 1117
Hpy99I CGWCG 1 cut(s) 1259
HpyAV CCTTC 4 cut(s) 154, 642, 739, 1137
HpyCH4III ACNGT 1 cut(s) 1190
HpyCH4IV ACGT 2 cut(s) 381, 907
HpyCH4V TGCA 7 cut(s) 44, 98, 284, 296, 389, 415, 561
HpyF10VI GCNNNNNNNGC 4 cut(s) 95, 212, 628, 979
HpyF3I CTNAG 1 cut(s) 300
HpySE526I ACGT 2 cut(s) 381, 907
Hsp92I GRCGYC 1 cut(s) 323
HspAI GCGC 3 cut(s) 69, 164, 488
Kzo9I GATC 4 cut(s) 724, 832, 1083, 1137
LguI GCTCTTC 1 cut(s) 358
LmnI GCTCC 2 cut(s) 612, 652
Lsp1109I GCAGC 3 cut(s) 28, 705, 1225
LweI GCATC 1 cut(s) 922
MaeI CTAG 1 cut(s) 717
MaeII ACGT 2 cut(s) 381, 907
MaeIII GTNAC 5 cut(s) 199, 303, 885, 1069, 1190
MalI GATC 4 cut(s) 726, 834, 1085, 1139
MboI GATC 4 cut(s) 724, 832, 1083, 1137
MboII GAAGA 9 cut(s) 24, 27, 108, 111, 120, 123, 144, 345, 531
MfeI CAATTG 2 cut(s) 402, 659
MhlI GDGCHC 2 cut(s) 91, 417
MlsI TGGCCA 1 cut(s) 509
MluCI AATT 9 cut(s) 157, 402, 436, 659, 891, 1017, 1027, 1032, 1282
MluNI TGGCCA 1 cut(s) 509
MlyI GAGTC 2 cut(s) 669, 1112
MmeI TCCRAC 1 cut(s) 1237
Mox20I TGGCCA 1 cut(s) 509
MscI TGGCCA 1 cut(s) 509
MseI TTAA 2 cut(s) 366, 1172
MslI CAYNNNNRTG 3 cut(s) 420, 426, 530
Msp20I TGGCCA 1 cut(s) 509
MspA1I CMGCKG 1 cut(s) 1216
MspI CCGG 3 cut(s) 332, 1105, 1176
MspR9I CCNGG 3 cut(s) 7, 640, 882
MunI CAATTG 2 cut(s) 402, 659
Mva1269I GAATGC 1 cut(s) 490
MvaI CCWGG 3 cut(s) 7, 640, 882
MwoI GCNNNNNNNGC 4 cut(s) 95, 212, 628, 979
NcoI CCATGG 2 cut(s) 308, 796
NdeII GATC 4 cut(s) 724, 832, 1083, 1137
NlaIV GGNNCC 6 cut(s) 88, 181, 336, 553, 804, 1109
NmuCI GTSAC 3 cut(s) 199, 885, 1069
NsbI TGCGCA 1 cut(s) 70
NspI RCATGY 2 cut(s) 75, 254
PciSI GCTCTTC 1 cut(s) 358
PctI GAATGC 1 cut(s) 490
PfeI GAWTC 1 cut(s) 1234
PflFI GACNNNGTC 1 cut(s) 1129
PflMI CCANNNNNTGG 2 cut(s) 685, 1128
PinAI ACCGGT 2 cut(s) 331, 1175
PkrI GCNGC 4 cut(s) 43, 692, 695, 1215
PleI GAGTC 2 cut(s) 669, 1112
PpsI GAGTC 2 cut(s) 669, 1112
Ppu21I YACGTR 2 cut(s) 382, 908
Psp6I CCWGG 3 cut(s) 5, 638, 880
PspEI GGTNACC 1 cut(s) 885
PspGI CCWGG 3 cut(s) 5, 638, 880
PspN4I GGNNCC 6 cut(s) 88, 181, 336, 553, 804, 1109
PspPI GGNCC 5 cut(s) 180, 551, 566, 803, 1226
PsyI GACNNNGTC 1 cut(s) 1129
RsaI GTAC 2 cut(s) 192, 1051
RsaNI GTAC 2 cut(s) 191, 1050
RseI CAYNNNNRTG 3 cut(s) 420, 426, 530
SapI GCTCTTC 1 cut(s) 358
SaqAI TTAA 2 cut(s) 366, 1172
SatI GCNGC 4 cut(s) 42, 691, 694, 1214
Sau3AI GATC 4 cut(s) 724, 832, 1083, 1137
Sau96I GGNCC 5 cut(s) 180, 551, 566, 803, 1226
SchI GAGTC 2 cut(s) 669, 1112
ScrFI CCNGG 3 cut(s) 7, 640, 882
SduI GDGCHC 2 cut(s) 91, 417
SfaNI GCATC 1 cut(s) 922
SfcI CTRYAG 1 cut(s) 570
SgrAI CRCCGGYG 1 cut(s) 331
SinI GGWCC 3 cut(s) 551, 803, 1226
SmiMI CAYNNNNRTG 3 cut(s) 420, 426, 530
Sse9I AATT 9 cut(s) 157, 402, 436, 659, 891, 1017, 1027, 1032, 1282
SsiI CCGC 6 cut(s) 204, 327, 690, 706, 775, 1216
SspMI CTAG 1 cut(s) 717
StyD4I CCNGG 3 cut(s) 5, 638, 880
StyI CCWWGG 3 cut(s) 183, 308, 796
TaaI ACNGT 1 cut(s) 1190
TaiI ACGT 2 cut(s) 384, 910
TaqI TCGA 1 cut(s) 345
TasI AATT 9 cut(s) 157, 402, 436, 659, 891, 1017, 1027, 1032, 1282
TauI GCSGC 1 cut(s) 693
TfiI GAWTC 1 cut(s) 1234
Tru1I TTAA 2 cut(s) 366, 1172
Tru9I TTAA 2 cut(s) 366, 1172
TscAI CASTG 4 cut(s) 448, 517, 734, 1074
TseFI GTSAC 3 cut(s) 199, 885, 1069
TseI GCWGC 3 cut(s) 41, 693, 1213
Tsp45I GTSAC 3 cut(s) 199, 885, 1069
TspDTI ATGAA 4 cut(s) 136, 225, 842, 971
TspRI CASTG 4 cut(s) 448, 517, 734, 1074
Tth111I GACNNNGTC 1 cut(s) 1129
Van91I CCANNNNNTGG 2 cut(s) 685, 1128
VneI GTGCAC 1 cut(s) 413
VpaK11BI GGWCC 3 cut(s) 551, 803, 1226
XapI RAATTY 1 cut(s) 1282
XceI RCATGY 2 cut(s) 75, 254
XmiI GTMKAC 1 cut(s) 432
XspI CTAG 1 cut(s) 717
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.