Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0011920

Physical Location & Seq

Genomic Coordinates Forward (+)

27144538 .. 27146200

Gene Structure 1663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G313900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 618 bp

ATGGAATTGGAAATGGAAGGAAATAGTGGGAACGAAGAAGAAAGTGACATCATCGGTGGAGGTGGTGGGAAAGTAAATTTATCGGCATCGGAGATAGAGTATGTGAGCTACGAAGGAGAAGATCATCTGCCGCTGATAATGGGGCTGGTGGACCAAGAACTGAGCGAACCTTACTCCATCTTCACGTACAGGTACTTCGTGTATCTGTGGCCGCAGCTGTGTTTTCTGGCATTCCACAGAGGCAAATGCGTGGGGACGGTGGTGTGCAAGATGGGAGAGCATCGCAACACATACAGAGGCTACATCGCCATGCTTGTTGTCATCAAGCCCTACAGAGGAAAAGGCATTGCTACCCAACTAGTTACCAGATCTATTCAAGTCATGATGGAATCAGGCTGTGAAGAGGTAACACTAGAAGCAGAAGTGACAAATAAAGGAGCACTGGCGTTGTATGGGCGCCTTGGATTTATCAGGGCAAAAAGGCTTTTCCGGTACTACTTGAACGGGGTTGATGCTTTCCGTCTCAAGCTGCTGTTTCCCCCCCGCCCAGACTTACTCTCCCAGTCCCAGTCCCAGTCCCAGTCCTCCCCACCTTTACATTGCAATTTACATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004596 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006473 GO:0006474 GO:0006807 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0019538 GO:0031248 GO:0031365 GO:0031414 GO:0031417 GO:0032991 GO:0034212 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051604 GO:0071704 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

206

Amino Acids

23.12

Weight (kDa)

5.79

Isoelectric Point (pI)

36.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011920)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38130 AT2G38130
fragaria_vesca	FvH4_6g54330
malus_domestica	MD09G1002300.v1.1
prunus_persica	Prupe.3G313900_v2.0.a1
pyrus_communis	pycom111g00180 pycom17g00210
rosa_chinensis	RchiOBHm_Chr2g0176551
rosa_laevigata	RLG00000022422
rosa_multiflora	Rmu_co8099318.1_g000001 Rmu_sc0001417.1_g000008 Rmu_sc0011904.1_g000003
rosa_roxburghii	Rroxscaffold_2G00076310
rosa_rugosa	Rorug02G0596100
rosa_samantha	Rh2AG673900 Rh2BG685100 Rh2CG648100 Rh2DG699000
rosa_wichuraiana	Rw2G055280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	456
AciI	CCGC	3 cut(s)	131, 212, 544
AcoI	YGGCCR	1 cut(s)	209
AcsI	RAATTY	1 cut(s)	76
AcyI	GRCGYC	1 cut(s)	457
AfaI	GTAC	3 cut(s)	188, 194, 494
AfiI	CCNNNNNNNGG	1 cut(s)	335
AgsI	TTSAA	2 cut(s)	377, 502
AhlI	ACTAGT	1 cut(s)	358
AluBI	AGCT	3 cut(s)	108, 217, 529
AluI	AGCT	3 cut(s)	108, 217, 529
Alw21I	GWGCWC	1 cut(s)	442
Alw26I	GTCTC	1 cut(s)	527
AoxI	GGCC	1 cut(s)	209
ApeKI	GCWGC	2 cut(s)	214, 529
ApoI	RAATTY	1 cut(s)	76
AspLEI	GCGC	1 cut(s)	459
AspS9I	GGNCC	1 cut(s)	151
AvaII	GGWCC	1 cut(s)	151
BanI	GGYRCC	1 cut(s)	456
BarI	GAAGNNNNNNTAC	2 cut(s)	179, 211
Bbv12I	GWGCWC	1 cut(s)	442
BbvI	GCAGC	2 cut(s)	226, 516
BccI	CCATC	3 cut(s)	185, 265, 379
BcoDI	GTCTC	1 cut(s)	527
BcuI	ACTAGT	1 cut(s)	358
BfaI	CTAG	2 cut(s)	359, 413
BfmI	CTRYAG	1 cut(s)	331
BfoI	RGCGCY	1 cut(s)	460
BglII	AGATCT	1 cut(s)	368
BisI	GCNGC	4 cut(s)	131, 212, 215, 530
BlsI	GCNGC	4 cut(s)	132, 213, 216, 531
Bme18I	GGWCC	1 cut(s)	151
BmgT120I	GGNCC	1 cut(s)	151
BmiI	GGNNCC	1 cut(s)	458
BmrI	ACTGGG	4 cut(s)	556, 562, 568, 574
BmsI	GCATC	3 cut(s)	95, 289, 502
BmuI	ACTGGG	4 cut(s)	556, 562, 568, 574
BpuEI	CTTGAG	1 cut(s)	509
BsaAI	YACGTR	1 cut(s)	186
BsaHI	GRCGYC	1 cut(s)	457
BsaJI	CCNNGG	1 cut(s)	460
BsaWI	WCCGGW	1 cut(s)	489
BsaXI	ACNNNNNCTCC	4 cut(s)	83, 113, 542, 572
Bsc4I	CCNNNNNNNGG	1 cut(s)	335
Bse1I	ACTGG	5 cut(s)	447, 562, 568, 574, 580
Bse3DI	GCAATG	2 cut(s)	345, 598
BseDI	CCNNGG	1 cut(s)	460
BseLI	CCNNNNNNNGG	1 cut(s)	335
BseMI	GCAATG	2 cut(s)	345, 598
BseMII	CTCAG	1 cut(s)	152
BseNI	ACTGG	5 cut(s)	447, 562, 568, 574, 580
BseXI	GCAGC	2 cut(s)	226, 516
BshFI	GGCC	1 cut(s)	211
BshNI	GGYRCC	1 cut(s)	456
BsiHKAI	GWGCWC	1 cut(s)	442
BsiSI	CCGG	1 cut(s)	490
BslFI	GGGAC	4 cut(s)	268, 550, 556, 562
BslI	CCNNNNNNNGG	1 cut(s)	335
BsmAI	GTCTC	1 cut(s)	527
BsmBI	CGTCTC	1 cut(s)	527
BsmFI	GGGAC	4 cut(s)	268, 550, 556, 562
BsmI	GAATGC	1 cut(s)	230
BsnI	GGCC	1 cut(s)	211
Bsp1286I	GDGCHC	1 cut(s)	442
Bsp143I	GATC	2 cut(s)	121, 368
BspACI	CCGC	3 cut(s)	131, 212, 544
BspANI	GGCC	1 cut(s)	211
BspCNI	CTCAG	1 cut(s)	153
BspHI	TCATGA	1 cut(s)	381
BspLI	GGNNCC	1 cut(s)	458
BspT107I	GGYRCC	1 cut(s)	456
BsrDI	GCAATG	2 cut(s)	345, 598
BsrI	ACTGG	5 cut(s)	447, 562, 568, 574, 580
BssECI	CCNNGG	1 cut(s)	460
BssMI	GATC	2 cut(s)	121, 368
BssNI	GRCGYC	1 cut(s)	457
BssT1I	CCWWGG	1 cut(s)	460
Bst4CI	ACNGT	1 cut(s)	259
Bst6I	CTCTTC	1 cut(s)	396
BstACI	GRCGYC	1 cut(s)	457
BstBAI	YACGTR	1 cut(s)	186
BstDEI	CTNAG	1 cut(s)	161
BstH2I	RGCGCY	1 cut(s)	460
BstHHI	GCGC	1 cut(s)	459
BstKTI	GATC	2 cut(s)	124, 371
BstMAI	GTCTC	1 cut(s)	527
BstMBI	GATC	2 cut(s)	121, 368
BstSFI	CTRYAG	1 cut(s)	331
BstV1I	GCAGC	2 cut(s)	226, 516
BstX2I	RGATCY	1 cut(s)	368
BstYI	RGATCY	1 cut(s)	368
BsuRI	GGCC	1 cut(s)	211
BtgZI	GCGATG	2 cut(s)	266, 289
BtsIMutI	CAGTG	1 cut(s)	440
CciI	TCATGA	1 cut(s)	381
CfoI	GCGC	1 cut(s)	459
Cfr13I	GGNCC	1 cut(s)	151
Csp6I	GTAC	3 cut(s)	187, 193, 493
CviAII	CATG	3 cut(s)	310, 382, 611
CviJI	RGCY	9 cut(s)	108, 145, 211, 217, 300, 328, 396, 484, 529
CviKI_1	RGCY	9 cut(s)	108, 145, 211, 217, 300, 328, 396, 484, 529
CviQI	GTAC	3 cut(s)	187, 193, 493
DdeI	CTNAG	1 cut(s)	161
DinI	GGCGCC	1 cut(s)	458
DpnI	GATC	2 cut(s)	123, 370
DpnII	GATC	2 cut(s)	121, 368
EaeI	YGGCCR	1 cut(s)	209
Eam1104I	CTCTTC	1 cut(s)	396
EarI	CTCTTC	1 cut(s)	396
Eco130I	CCWWGG	1 cut(s)	460
Eco47I	GGWCC	1 cut(s)	151
EcoT14I	CCWWGG	1 cut(s)	460
EgeI	GGCGCC	1 cut(s)	458
EheI	GGCGCC	1 cut(s)	458
ErhI	CCWWGG	1 cut(s)	460
Esp3I	CGTCTC	1 cut(s)	527
FaeI	CATG	3 cut(s)	313, 385, 614
FaiI	YATR	6 cut(s)	102, 292, 311, 383, 453, 612
FaqI	GGGAC	4 cut(s)	268, 550, 556, 562
FatI	CATG	3 cut(s)	309, 381, 610
FauI	CCCGC	1 cut(s)	551
Fnu4HI	GCNGC	4 cut(s)	131, 212, 215, 530
Fsp4HI	GCNGC	4 cut(s)	131, 212, 215, 530
FspBI	CTAG	2 cut(s)	359, 413
GlaI	GCGC	1 cut(s)	458
GluI	GCNGC	4 cut(s)	131, 212, 215, 530
HaeII	RGCGCY	1 cut(s)	460
HaeIII	GGCC	1 cut(s)	211
HapII	CCGG	1 cut(s)	490
HhaI	GCGC	1 cut(s)	459
Hin1I	GRCGYC	1 cut(s)	457
Hin1II	CATG	3 cut(s)	313, 385, 614
Hin6I	GCGC	1 cut(s)	457
HinP1I	GCGC	1 cut(s)	457
HinfI	GANTC	1 cut(s)	389
HpaII	CCGG	1 cut(s)	490
Hpy166II	GTNNAC	1 cut(s)	151
Hpy188I	TCNGA	1 cut(s)	91
Hpy188III	TCNNGA	1 cut(s)	382
Hpy8I	GTNNAC	1 cut(s)	151
HpyAV	CCTTC	2 cut(s)	11, 107
HpyCH4III	ACNGT	1 cut(s)	259
HpyCH4IV	ACGT	1 cut(s)	185
HpyCH4V	TGCA	2 cut(s)	267, 603
HpyF3I	CTNAG	1 cut(s)	161
HpySE526I	ACGT	1 cut(s)	185
Hsp92I	GRCGYC	1 cut(s)	457
Hsp92II	CATG	3 cut(s)	313, 385, 614
HspAI	GCGC	1 cut(s)	457
KasI	GGCGCC	1 cut(s)	456
Kzo9I	GATC	2 cut(s)	121, 368
LmnI	GCTCC	1 cut(s)	437
Lsp1109I	GCAGC	2 cut(s)	226, 516
LweI	GCATC	3 cut(s)	95, 289, 502
MaeI	CTAG	2 cut(s)	359, 413
MaeII	ACGT	1 cut(s)	185
MaeIII	GTNAC	4 cut(s)	44, 361, 406, 424
MalI	GATC	2 cut(s)	123, 370
MboI	GATC	2 cut(s)	121, 368
MboII	GAAGA	5 cut(s)	47, 50, 131, 172, 413
MflI	RGATCY	1 cut(s)	368
MhlI	GDGCHC	1 cut(s)	442
MluCI	AATT	3 cut(s)	5, 76, 604
Mly113I	GGCGCC	1 cut(s)	457
MnlI	CCTC	6 cut(s)	53, 233, 290, 329, 397, 595
MslI	CAYNNNNRTG	1 cut(s)	308
MspA1I	CMGCKG	2 cut(s)	133, 217
MspI	CCGG	1 cut(s)	490
Mva1269I	GAATGC	1 cut(s)	230
NarI	GGCGCC	1 cut(s)	457
NdeII	GATC	2 cut(s)	121, 368
NlaIII	CATG	3 cut(s)	313, 385, 614
NlaIV	GGNNCC	1 cut(s)	458
NmuCI	GTSAC	2 cut(s)	44, 424
PagI	TCATGA	1 cut(s)	381
PctI	GAATGC	1 cut(s)	230
PfeI	GAWTC	1 cut(s)	389
PkrI	GCNGC	4 cut(s)	132, 213, 216, 531
PluTI	GGCGCC	1 cut(s)	460
Ppu21I	YACGTR	1 cut(s)	186
PspN4I	GGNNCC	1 cut(s)	458
PspPI	GGNCC	1 cut(s)	151
PsuI	RGATCY	1 cut(s)	368
PvuII	CAGCTG	1 cut(s)	217
RsaI	GTAC	3 cut(s)	188, 194, 494
RsaNI	GTAC	3 cut(s)	187, 193, 493
RseI	CAYNNNNRTG	1 cut(s)	308
SatI	GCNGC	4 cut(s)	131, 212, 215, 530
Sau3AI	GATC	2 cut(s)	121, 368
Sau96I	GGNCC	1 cut(s)	151
SduI	GDGCHC	1 cut(s)	442
SetI	ASST	9 cut(s)	64, 110, 172, 188, 194, 219, 408, 531, 595
SfaNI	GCATC	3 cut(s)	95, 289, 502
SfcI	CTRYAG	1 cut(s)	331
SfoI	GGCGCC	1 cut(s)	458
SinI	GGWCC	1 cut(s)	151
SmiMI	CAYNNNNRTG	1 cut(s)	308
SmlI	CTYRAG	1 cut(s)	524
SmoI	CTYRAG	1 cut(s)	524
SpeI	ACTAGT	1 cut(s)	358
Sse9I	AATT	3 cut(s)	5, 76, 604
SsiI	CCGC	3 cut(s)	131, 212, 544
SspDI	GGCGCC	1 cut(s)	456
SspMI	CTAG	2 cut(s)	359, 413
StyI	CCWWGG	1 cut(s)	460
TaaI	ACNGT	1 cut(s)	259
TaiI	ACGT	1 cut(s)	188
TasI	AATT	3 cut(s)	5, 76, 604
TauI	GCSGC	2 cut(s)	133, 214
TfiI	GAWTC	1 cut(s)	389
TscAI	CASTG	1 cut(s)	447
TseFI	GTSAC	2 cut(s)	44, 424
TseI	GCWGC	2 cut(s)	214, 529
Tsp45I	GTSAC	2 cut(s)	44, 424
TspGWI	ACGGA	1 cut(s)	509
TspRI	CASTG	1 cut(s)	447
VpaK11BI	GGWCC	1 cut(s)	151
XapI	RAATTY	1 cut(s)	76
XspI	CTAG	2 cut(s)	359, 413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.