Belongs to the Casparian strip membrane proteins (CASP) family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35760 |
| fragaria_vesca | FvH4_3g00580 |
| malus_domestica | MD00G1058300.v1.1 MD10G1336500.v1.1 |
| prunus_persica | Prupe.4G007000_v2.0.a1 |
| pyrus_communis | pycom05g32590 |
| rosa_chinensis | RchiOBHm_Chr5g0000791 |
| rosa_laevigata | RLG00000030896 |
| rosa_multiflora | Rmu_sc0011992.1_g000001 Rmu_sc0040466.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00075440 |
| rosa_rugosa | Rorug04G0386600 |
| rosa_samantha | Rh5AG006500 Rh5BG008400 Rh5CG007100 Rh5DG007100 |
| rosa_wichuraiana | Rw5G000670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 399 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 333, 609 |
| AciI | CCGC | 2 cut(s) | 407, 565 |
| AclWI | GGATC | 1 cut(s) | 344 |
| AcsI | RAATTY | 1 cut(s) | 200 |
| AcuI | CTGAAG | 1 cut(s) | 301 |
| AdeI | CACNNNGTG | 1 cut(s) | 609 |
| AfeI | AGCGCT | 1 cut(s) | 505 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 333, 423, 487, 609 |
| AgsI | TTSAA | 1 cut(s) | 556 |
| AjnI | CCWGG | 3 cut(s) | 28, 162, 605 |
| AleI | CACNNNNGTG | 1 cut(s) | 530 |
| AluBI | AGCT | 6 cut(s) | 6, 197, 218, 332, 392, 436 |
| AluI | AGCT | 6 cut(s) | 6, 197, 218, 332, 392, 436 |
| Alw21I | GWGCWC | 3 cut(s) | 315, 527, 537 |
| AlwI | GGATC | 1 cut(s) | 344 |
| Aor51HI | AGCGCT | 1 cut(s) | 505 |
| ApoI | RAATTY | 1 cut(s) | 200 |
| AspLEI | GCGC | 4 cut(s) | 282, 400, 506, 602 |
| AsuHPI | GGTGA | 3 cut(s) | 244, 362, 370 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 150, 183 |
| Bbv12I | GWGCWC | 3 cut(s) | 315, 527, 537 |
| BccI | CCATC | 1 cut(s) | 355 |
| BciT130I | CCWGG | 3 cut(s) | 30, 164, 607 |
| BclI | TGATCA | 1 cut(s) | 352 |
| BfmI | CTRYAG | 1 cut(s) | 381 |
| BfoI | RGCGCY | 2 cut(s) | 507, 603 |
| BglII | AGATCT | 1 cut(s) | 174 |
| Bme1390I | CCNGG | 3 cut(s) | 30, 164, 607 |
| BmrFI | CCNGG | 3 cut(s) | 30, 164, 607 |
| BsaJI | CCNNGG | 3 cut(s) | 29, 162, 241 |
| BsaWI | WCCGGW | 1 cut(s) | 40 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 333, 423, 487, 609 |
| Bse3DI | GCAATG | 2 cut(s) | 132, 446 |
| BseBI | CCWGG | 3 cut(s) | 30, 164, 607 |
| BseDI | CCNNGG | 3 cut(s) | 29, 162, 241 |
| BseGI | GGATG | 1 cut(s) | 450 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 333, 423, 487, 609 |
| BseMI | GCAATG | 2 cut(s) | 132, 446 |
| BseMII | CTCAG | 1 cut(s) | 512 |
| BsiHKAI | GWGCWC | 3 cut(s) | 315, 527, 537 |
| BsiSI | CCGG | 1 cut(s) | 41 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 333, 423, 487, 609 |
| Bsp1286I | GDGCHC | 3 cut(s) | 315, 527, 537 |
| Bsp143I | GATC | 5 cut(s) | 73, 114, 174, 336, 352 |
| Bsp19I | CCATGG | 1 cut(s) | 241 |
| BspACI | CCGC | 2 cut(s) | 407, 565 |
| BspCNI | CTCAG | 1 cut(s) | 513 |
| BspMAI | CTGCAG | 1 cut(s) | 385 |
| BspPI | GGATC | 1 cut(s) | 344 |
| BspQI | GCTCTTC | 1 cut(s) | 320 |
| BsrDI | GCAATG | 2 cut(s) | 132, 446 |
| BssECI | CCNNGG | 3 cut(s) | 29, 162, 241 |
| BssMI | GATC | 5 cut(s) | 73, 114, 174, 336, 352 |
| BssT1I | CCWWGG | 1 cut(s) | 241 |
| Bst2UI | CCWGG | 3 cut(s) | 30, 164, 607 |
| Bst4CI | ACNGT | 1 cut(s) | 529 |
| Bst6I | CTCTTC | 2 cut(s) | 320, 566 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 277 |
| BstC8I | GCNNGC | 2 cut(s) | 323, 502 |
| BstDEI | CTNAG | 1 cut(s) | 521 |
| BstDSI | CCRYGG | 1 cut(s) | 241 |
| BstF5I | GGATG | 1 cut(s) | 450 |
| BstH2I | RGCGCY | 2 cut(s) | 507, 603 |
| BstHHI | GCGC | 4 cut(s) | 282, 400, 506, 602 |
| BstKTI | GATC | 5 cut(s) | 76, 117, 177, 339, 355 |
| BstMBI | GATC | 5 cut(s) | 73, 114, 174, 336, 352 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 277, 389, 404, 413, 433, 585, 594 |
| BstNI | CCWGG | 3 cut(s) | 30, 164, 607 |
| BstSCI | CCNGG | 3 cut(s) | 28, 162, 605 |
| BstSFI | CTRYAG | 1 cut(s) | 381 |
| BstX2I | RGATCY | 1 cut(s) | 174 |
| BstYI | RGATCY | 1 cut(s) | 174 |
| BtgI | CCRYGG | 1 cut(s) | 241 |
| BtsCI | GGATG | 1 cut(s) | 450 |
| BtsIMutI | CAGTG | 2 cut(s) | 204, 525 |
| Cac8I | GCNNGC | 2 cut(s) | 323, 502 |
| CfoI | GCGC | 4 cut(s) | 282, 400, 506, 602 |
| CsiI | ACCWGGT | 1 cut(s) | 605 |
| CviAII | CATG | 3 cut(s) | 211, 242, 295 |
| CviJI | RGCY | 9 cut(s) | 6, 197, 218, 239, 325, 332, 380, 392, 436 |
| CviKI_1 | RGCY | 9 cut(s) | 6, 197, 218, 239, 325, 332, 380, 392, 436 |
| DdeI | CTNAG | 1 cut(s) | 521 |
| DpnI | GATC | 5 cut(s) | 75, 116, 176, 338, 354 |
| DpnII | GATC | 5 cut(s) | 73, 114, 174, 336, 352 |
| DraI | TTTAAA | 1 cut(s) | 63 |
| DraIII | CACNNNGTG | 1 cut(s) | 609 |
| Eam1104I | CTCTTC | 2 cut(s) | 320, 566 |
| EarI | CTCTTC | 2 cut(s) | 320, 566 |
| Eco130I | CCWWGG | 1 cut(s) | 241 |
| Eco47III | AGCGCT | 1 cut(s) | 505 |
| Eco57I | CTGAAG | 1 cut(s) | 301 |
| EcoRII | CCWGG | 3 cut(s) | 28, 162, 605 |
| EcoT14I | CCWWGG | 1 cut(s) | 241 |
| ErhI | CCWWGG | 1 cut(s) | 241 |
| FaeI | CATG | 3 cut(s) | 214, 245, 298 |
| FatI | CATG | 3 cut(s) | 210, 241, 294 |
| FauNDI | CATATG | 1 cut(s) | 367 |
| FbaI | TGATCA | 1 cut(s) | 352 |
| FokI | GGATG | 1 cut(s) | 457 |
| FspI | TGCGCA | 1 cut(s) | 399 |
| GlaI | GCGC | 4 cut(s) | 281, 399, 505, 601 |
| HaeII | RGCGCY | 2 cut(s) | 507, 603 |
| HapII | CCGG | 1 cut(s) | 41 |
| HhaI | GCGC | 4 cut(s) | 282, 400, 506, 602 |
| Hin1II | CATG | 3 cut(s) | 214, 245, 298 |
| Hin6I | GCGC | 4 cut(s) | 280, 398, 504, 600 |
| HinP1I | GCGC | 4 cut(s) | 280, 398, 504, 600 |
| HinfI | GANTC | 1 cut(s) | 129 |
| HpaII | CCGG | 1 cut(s) | 41 |
| HphI | GGTGA | 3 cut(s) | 244, 362, 370 |
| Hpy188I | TCNGA | 3 cut(s) | 78, 433, 522 |
| Hpy188III | TCNNGA | 1 cut(s) | 187 |
| HpyCH4III | ACNGT | 1 cut(s) | 529 |
| HpyCH4V | TGCA | 8 cut(s) | 257, 271, 383, 439, 456, 477, 500, 543 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 277, 389, 404, 413, 433, 585, 594 |
| HpyF3I | CTNAG | 1 cut(s) | 521 |
| Hsp92II | CATG | 3 cut(s) | 214, 245, 298 |
| HspAI | GCGC | 4 cut(s) | 280, 398, 504, 600 |
| Ksp22I | TGATCA | 1 cut(s) | 352 |
| Kzo9I | GATC | 5 cut(s) | 73, 114, 174, 336, 352 |
| LguI | GCTCTTC | 1 cut(s) | 320 |
| LmnI | GCTCC | 1 cut(s) | 389 |
| MabI | ACCWGGT | 1 cut(s) | 605 |
| MalI | GATC | 5 cut(s) | 75, 116, 176, 338, 354 |
| MboI | GATC | 5 cut(s) | 73, 114, 174, 336, 352 |
| MboII | GAAGA | 5 cut(s) | 169, 202, 307, 460, 553 |
| MflI | RGATCY | 1 cut(s) | 174 |
| MhlI | GDGCHC | 3 cut(s) | 315, 527, 537 |
| MluCI | AATT | 4 cut(s) | 58, 200, 249, 495 |
| MlyI | GAGTC | 1 cut(s) | 138 |
| MnlI | CCTC | 4 cut(s) | 78, 99, 296, 484 |
| MseI | TTAA | 1 cut(s) | 62 |
| MslI | CAYNNNNRTG | 2 cut(s) | 209, 530 |
| MspI | CCGG | 1 cut(s) | 41 |
| MspR9I | CCNGG | 3 cut(s) | 30, 164, 607 |
| MvaI | CCWGG | 3 cut(s) | 30, 164, 607 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 277, 389, 404, 413, 433, 585, 594 |
| NcoI | CCATGG | 1 cut(s) | 241 |
| NdeI | CATATG | 1 cut(s) | 367 |
| NdeII | GATC | 5 cut(s) | 73, 114, 174, 336, 352 |
| NlaIII | CATG | 3 cut(s) | 214, 245, 298 |
| NsbI | TGCGCA | 1 cut(s) | 399 |
| OliI | CACNNNNGTG | 1 cut(s) | 530 |
| PciSI | GCTCTTC | 1 cut(s) | 320 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 333, 609 |
| PleI | GAGTC | 1 cut(s) | 137 |
| PpsI | GAGTC | 1 cut(s) | 137 |
| Psp6I | CCWGG | 3 cut(s) | 28, 162, 605 |
| PspGI | CCWGG | 3 cut(s) | 28, 162, 605 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 455, 487 |
| PstI | CTGCAG | 1 cut(s) | 385 |
| PsuI | RGATCY | 1 cut(s) | 174 |
| RseI | CAYNNNNRTG | 2 cut(s) | 209, 530 |
| SapI | GCTCTTC | 1 cut(s) | 320 |
| SaqAI | TTAA | 1 cut(s) | 62 |
| Sau3AI | GATC | 5 cut(s) | 73, 114, 174, 336, 352 |
| SchI | GAGTC | 1 cut(s) | 138 |
| ScrFI | CCNGG | 3 cut(s) | 30, 164, 607 |
| SduI | GDGCHC | 3 cut(s) | 315, 527, 537 |
| SexAI | ACCWGGT | 1 cut(s) | 605 |
| SfcI | CTRYAG | 1 cut(s) | 381 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 209, 530 |
| Sse9I | AATT | 4 cut(s) | 58, 200, 249, 495 |
| SsiI | CCGC | 2 cut(s) | 407, 565 |
| StyD4I | CCNGG | 3 cut(s) | 28, 162, 605 |
| StyI | CCWWGG | 1 cut(s) | 241 |
| TaaI | ACNGT | 1 cut(s) | 529 |
| TasI | AATT | 4 cut(s) | 58, 200, 249, 495 |
| Tru1I | TTAA | 1 cut(s) | 62 |
| Tru9I | TTAA | 1 cut(s) | 62 |
| TscAI | CASTG | 2 cut(s) | 211, 532 |
| TspDTI | ATGAA | 2 cut(s) | 227, 461 |
| TspRI | CASTG | 2 cut(s) | 211, 532 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 333, 609 |
| XapI | RAATTY | 1 cut(s) | 200 |