Prupe.4G026400_v2.0.a1

pyruvate, phosphate dikinase regulatory protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
1236780 .. 1238706
1927 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G026400.1

Sequence Viewer

Length: 1203 bp
ATGATTGCTTCTTCCACCTTGAGCGTTCCGAATCTCGGTCTCGCACCCAGGACCAGTTATGCAAATCACCAACCAATACTCAAAACTCCAAACGCCTCCGCTTCCTCCTCCGAGCCGCAGGGTGGAAAACCCAAGGGTAGCTCTCAACTGACTCGATGGTCCAGGGCGCGGGCCATACGCTCGGGTCGGAAATTGGACCGCGCGGGCCAGCGGAGCCAGTTGCTGGAACCGAATTCTCCGGTGCAGCCGAGAGAGCGCGTCTCGCTAGACGTCAAGGATGATACTTCAACAGGAAGCGACGGCGAGGATGACGTGGAGATGACGGCGGGGAAGTCGATATACATGGTTTCTGACGGAACTGGGTGGACGGTCGAGCACTCCGTGAACGCGGCGTTGGGCCAGTTCGAGCATTGCTTGGTCGATCGGGGCTGCGCTGTCAATACCCATTTGTTTTCTGGGATTGATGAAGTAGAGCGGTTAATGGAGATTGTAAAGCAAGCAGCCAAAGAAGGTGCCATGCTTGTGTACACATTAGCTGAACCATCAATGGCTGAGTCTGCTAGGCATGCCTGTAAGCATTGGGGCATACCAACCACAGATATGTTGGGTCCAATTACAGAGGCCATAGCAACCCATCTAGGCGTGTCACCCTCTGGCCTTCCACGTGGGGCTCCTGGCAGGAGCTTTCCTCTTACAGATGACTACTTTCGTAGGATTGAAGCCATTGAATTCACTATCAAGCAAGATGATGGGGCATTGCCCCAGAACTTGCACAAGGCTGACATTATACTTGCTGGGGTCTCTCGTACTGGGAAGACCCCGCTGTCGATTTATCTGGCGCAGAAAGGTTACAAAGTGGCAAATGTGCCTATTGTGATGGGGGTTCCATTGCCAAAGACCCTTTTTGAGGTTGACCCAGAAAAGGTTTTTGGTCTCACTATCAATCCTCTAGTGTTGCAAACAATTAGAAGGGCAAGAGCTAAGACTCTGGGATTTAGTGAAGGAATGAAGAGTAACTATTCCGAGATGGATCATGTGAGACAGGAGCTGGAATTTGCTCGAACGATTCTTGCACAGAATCCTGTCTGGCCAGTAATTGAGGTAACAGGCAAAGCAATTGAAGAAACTGCTGCTGTTGTACTGAGGCTTTATCATGACCGGAAGCACAAGTGCTCAATGCCAAGAATATCAAAACGTTATTAA

Protein Analysis

401

Amino Acids

43.76

Weight (kDa)

8.89

Isoelectric Point (pI)

44.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013019)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 157, 823
AatII GACGTC 1 cut(s) 273
AccB1I GGYRCC 1 cut(s) 512
AccB7I CCANNNNNTGG 1 cut(s) 223
AccBSI CCGCTC 1 cut(s) 475
AccII CGCG 5 cut(s) 169, 201, 203, 258, 389
AclI AACGTT 1 cut(s) 1195
AclWI GGATC 1 cut(s) 1038
AcoI YGGCCR 1 cut(s) 1088
AcsI RAATTY 3 cut(s) 232, 728, 1052
AcvI CACGTG 1 cut(s) 665
AcyI GRCGYC 1 cut(s) 270
AdeI CACNNNGTG 1 cut(s) 382
AfaI GTAC 3 cut(s) 527, 808, 1140
AfiI CCNNNNNNNGG 6 cut(s) 35, 122, 168, 223, 907, 922
AgsI TTSAA 4 cut(s) 288, 719, 728, 1121
AjiI CACGTC 1 cut(s) 313
AjnI CCWGG 3 cut(s) 47, 161, 673
AjuI GAANNNNNNNTTGG 4 cut(s) 377, 409, 912, 944
AluBI AGCT 5 cut(s) 141, 536, 684, 980, 1048
AluI AGCT 5 cut(s) 141, 536, 684, 980, 1048
Alw21I GWGCWC 2 cut(s) 378, 1175
Alw26I GTCTC 5 cut(s) 44, 265, 805, 938, 1033
AlwI GGATC 1 cut(s) 1038
AlwNI CAGNNNCTG 2 cut(s) 223, 1048
Ama87I CYCGRG 1 cut(s) 181
AoxI GGCC 6 cut(s) 171, 205, 397, 621, 655, 1088
ApeKI GCWGC 4 cut(s) 244, 429, 500, 1130
ApoI RAATTY 3 cut(s) 232, 728, 1052
AspLEI GCGC 5 cut(s) 169, 203, 258, 434, 841
AspS9I GGNCC 7 cut(s) 51, 159, 171, 196, 205, 397, 608
AsuHPI GGTGA 2 cut(s) 59, 639
AvaI CYCGRG 1 cut(s) 181
AvaII GGWCC 4 cut(s) 51, 159, 196, 608
BalI TGGCCA 1 cut(s) 1090
BanI GGYRCC 1 cut(s) 512
BanII GRGCYC 1 cut(s) 673
BarI GAAGNNNNNNTAC 2 cut(s) 323, 355
BbrPI CACGTG 1 cut(s) 665
BbsI GAAGAC 1 cut(s) 821
Bbv12I GWGCWC 2 cut(s) 378, 1175
BbvI GCAGC 4 cut(s) 256, 416, 512, 1117
BccI CCATC 6 cut(s) 150, 550, 642, 743, 871, 1021
BceAI ACGGC 2 cut(s) 316, 339
BciT130I CCWGG 3 cut(s) 49, 163, 675
BcoDI GTCTC 5 cut(s) 44, 265, 805, 938, 1033
BfaI CTAG 4 cut(s) 266, 561, 638, 950
BisI GCNGC 6 cut(s) 116, 245, 390, 430, 501, 1131
BlsI GCNGC 6 cut(s) 117, 246, 391, 431, 502, 1132
Bme1390I CCNGG 3 cut(s) 49, 163, 675
Bme18I GGWCC 4 cut(s) 51, 159, 196, 608
BmeT110I CYCGRG 1 cut(s) 181
BmgBI CACGTC 1 cut(s) 313
BmgT120I GGNCC 7 cut(s) 51, 159, 171, 196, 205, 397, 608
BmiI GGNNCC 6 cut(s) 215, 228, 514, 609, 672, 885
BmrFI CCNGG 3 cut(s) 49, 163, 675
BmrI ACTGGG 2 cut(s) 369, 819
BmuI ACTGGG 2 cut(s) 369, 819
BpiI GAAGAC 1 cut(s) 821
BplI GAGNNNNNCTC 4 cut(s) 245, 277, 673, 705
BpuEI CTTGAG 1 cut(s) 40
BsaAI YACGTR 1 cut(s) 665
BsaHI GRCGYC 1 cut(s) 270
BsaI GGTCTC 3 cut(s) 44, 805, 938
BsaJI CCNNGG 3 cut(s) 47, 132, 162
BsaWI WCCGGW 2 cut(s) 238, 1158
Bsc4I CCNNNNNNNGG 6 cut(s) 35, 122, 168, 223, 907, 922
Bse1I ACTGG 6 cut(s) 54, 217, 364, 400, 814, 1091
Bse3DI GCAATG 3 cut(s) 409, 755, 887
BseBI CCWGG 3 cut(s) 49, 163, 675
BseDI CCNNGG 3 cut(s) 47, 132, 162
BseGI GGATG 2 cut(s) 283, 313
BseLI CCNNNNNNNGG 6 cut(s) 35, 122, 168, 223, 907, 922
BseMI GCAATG 3 cut(s) 409, 755, 887
BseMII CTCAG 2 cut(s) 543, 1133
BseNI ACTGG 6 cut(s) 54, 217, 364, 400, 814, 1091
BseRI GAGGAG 1 cut(s) 97
BseXI GCAGC 4 cut(s) 256, 416, 512, 1117
BseYI CCCAGC 1 cut(s) 794
BsgI GTGCAG 1 cut(s) 263
Bsh1236I CGCG 5 cut(s) 169, 201, 203, 258, 389
Bsh1285I CGRYCG 2 cut(s) 372, 424
BshFI GGCC 6 cut(s) 173, 207, 399, 623, 657, 1090
BshNI GGYRCC 1 cut(s) 512
BsiEI CGRYCG 2 cut(s) 372, 424
BsiHKAI GWGCWC 2 cut(s) 378, 1175
BsiHKCI CYCGRG 1 cut(s) 181
BsiSI CCGG 2 cut(s) 239, 1159
BslI CCNNNNNNNGG 6 cut(s) 35, 122, 168, 223, 907, 922
BsmAI GTCTC 5 cut(s) 44, 265, 805, 938, 1033
BsmBI CGTCTC 1 cut(s) 265
BsnI GGCC 6 cut(s) 173, 207, 399, 623, 657, 1090
Bso31I GGTCTC 3 cut(s) 44, 805, 938
BsoBI CYCGRG 1 cut(s) 181
Bsp1286I GDGCHC 3 cut(s) 378, 673, 1175
Bsp1407I TGTACA 1 cut(s) 525
Bsp143I GATC 2 cut(s) 421, 1030
BspANI GGCC 6 cut(s) 173, 207, 399, 623, 657, 1090
BspCNI CTCAG 2 cut(s) 544, 1134
BspFNI CGCG 5 cut(s) 169, 201, 203, 258, 389
BspHI TCATGA 1 cut(s) 1153
BspLI GGNNCC 6 cut(s) 215, 228, 514, 609, 672, 885
BspPI GGATC 1 cut(s) 1038
BspT107I GGYRCC 1 cut(s) 512
BspTNI GGTCTC 3 cut(s) 44, 805, 938
BsrBI CCGCTC 1 cut(s) 475
BsrDI GCAATG 3 cut(s) 409, 755, 887
BsrGI TGTACA 1 cut(s) 525
BsrI ACTGG 6 cut(s) 54, 217, 364, 400, 814, 1091
BssECI CCNNGG 3 cut(s) 47, 132, 162
BssMI GATC 2 cut(s) 421, 1030
BssNI GRCGYC 1 cut(s) 270
BssT1I CCWWGG 1 cut(s) 132
Bst2UI CCWGG 3 cut(s) 49, 163, 675
Bst4CI ACNGT 1 cut(s) 370
Bst6I CTCTTC 1 cut(s) 1004
BstACI GRCGYC 1 cut(s) 270
BstAUI TGTACA 1 cut(s) 525
BstBAI YACGTR 1 cut(s) 665
BstC8I GCNNGC 5 cut(s) 171, 205, 209, 498, 567
BstDEI CTNAG 3 cut(s) 552, 981, 1142
BstENI CCTNNNNNAGG 1 cut(s) 905
BstF5I GGATG 2 cut(s) 283, 313
BstFNI CGCG 5 cut(s) 169, 201, 203, 258, 389
BstHHI GCGC 5 cut(s) 169, 203, 258, 434, 841
BstKTI GATC 2 cut(s) 424, 1033
BstMAI GTCTC 5 cut(s) 44, 265, 805, 938, 1033
BstMBI GATC 2 cut(s) 421, 1030
BstMCI CGRYCG 2 cut(s) 372, 424
BstMWI GCNNNNNNNGC 5 cut(s) 213, 253, 262, 557, 566
BstNI CCWGG 3 cut(s) 49, 163, 675
BstNSI RCATGY 1 cut(s) 569
BstSCI CCNGG 3 cut(s) 47, 161, 673
BstUI CGCG 5 cut(s) 169, 201, 203, 258, 389
BstV1I GCAGC 4 cut(s) 256, 416, 512, 1117
BstV2I GAAGAC 1 cut(s) 821
BsuRI GGCC 6 cut(s) 173, 207, 399, 623, 657, 1090
BtrI CACGTC 1 cut(s) 313
BtsCI GGATG 2 cut(s) 283, 313
Cac8I GCNNGC 5 cut(s) 171, 205, 209, 498, 567
CaiI CAGNNNCTG 2 cut(s) 223, 1048
CciI TCATGA 1 cut(s) 1153
CfoI GCGC 5 cut(s) 169, 203, 258, 434, 841
Cfr13I GGNCC 7 cut(s) 51, 159, 171, 196, 205, 397, 608
CseI GACGC 1 cut(s) 247
Csp6I GTAC 3 cut(s) 526, 807, 1139
CviAII CATG 5 cut(s) 343, 517, 566, 1034, 1154
CviQI GTAC 3 cut(s) 526, 807, 1139
DdeI CTNAG 3 cut(s) 552, 981, 1142
DpnI GATC 2 cut(s) 423, 1032
DpnII GATC 2 cut(s) 421, 1030
DraIII CACNNNGTG 1 cut(s) 382
DrdI GACNNNNNNGTC 2 cut(s) 157, 823
DseDI GACNNNNNNGTC 2 cut(s) 157, 823
EaeI YGGCCR 1 cut(s) 1088
Eam1104I CTCTTC 1 cut(s) 1004
EarI CTCTTC 1 cut(s) 1004
Eco130I CCWWGG 1 cut(s) 132
Eco24I GRGCYC 1 cut(s) 673
Eco31I GGTCTC 3 cut(s) 44, 805, 938
Eco47I GGWCC 4 cut(s) 51, 159, 196, 608
Eco72I CACGTG 1 cut(s) 665
Eco88I CYCGRG 1 cut(s) 181
EcoNI CCTNNNNNAGG 1 cut(s) 905
EcoRI GAATTC 2 cut(s) 232, 728
EcoRII CCWGG 3 cut(s) 47, 161, 673
EcoT14I CCWWGG 1 cut(s) 132
EcoT38I GRGCYC 1 cut(s) 673
ErhI CCWWGG 1 cut(s) 132
Esp3I CGTCTC 1 cut(s) 265
FaeI CATG 5 cut(s) 346, 520, 569, 1037, 1157
FatI CATG 5 cut(s) 342, 516, 565, 1033, 1153
FauI CCCGC 4 cut(s) 162, 196, 319, 828
Fnu4HI GCNGC 6 cut(s) 116, 245, 390, 430, 501, 1131
FokI GGATG 2 cut(s) 290, 320
FriOI GRGCYC 1 cut(s) 673
Fsp4HI GCNGC 6 cut(s) 116, 245, 390, 430, 501, 1131
FspBI CTAG 4 cut(s) 266, 561, 638, 950
GlaI GCGC 5 cut(s) 168, 202, 257, 433, 840
GluI GCNGC 6 cut(s) 116, 245, 390, 430, 501, 1131
GsaI CCCAGC 1 cut(s) 798
HaeIII GGCC 6 cut(s) 173, 207, 399, 623, 657, 1090
HapII CCGG 2 cut(s) 239, 1159
HgaI GACGC 1 cut(s) 247
HhaI GCGC 5 cut(s) 169, 203, 258, 434, 841
Hin1I GRCGYC 1 cut(s) 270
Hin1II CATG 5 cut(s) 346, 520, 569, 1037, 1157
Hin6I GCGC 5 cut(s) 167, 201, 256, 432, 839
HinP1I GCGC 5 cut(s) 167, 201, 256, 432, 839
HincII GTYRAC 1 cut(s) 913
HindII GTYRAC 1 cut(s) 913
HinfI GANTC 6 cut(s) 31, 151, 554, 985, 1066, 1078
HpaII CCGG 2 cut(s) 239, 1159
HphI GGTGA 2 cut(s) 59, 639
Hpy166II GTNNAC 5 cut(s) 366, 385, 526, 528, 913
Hpy188I TCNGA 5 cut(s) 30, 112, 189, 352, 1024
Hpy188III TCNNGA 1 cut(s) 1154
Hpy8I GTNNAC 5 cut(s) 366, 385, 526, 528, 913
Hpy99I CGWCG 1 cut(s) 302
HpyAV CCTTC 4 cut(s) 503, 668, 963, 995
HpyCH4III ACNGT 1 cut(s) 370
HpyCH4IV ACGT 4 cut(s) 270, 312, 664, 1195
HpyCH4V TGCA 5 cut(s) 62, 244, 772, 958, 1073
HpyF10VI GCNNNNNNNGC 5 cut(s) 213, 253, 262, 557, 566
HpyF3I CTNAG 3 cut(s) 552, 981, 1142
HpySE526I ACGT 4 cut(s) 270, 312, 664, 1195
Hsp92I GRCGYC 1 cut(s) 270
Hsp92II CATG 5 cut(s) 346, 520, 569, 1037, 1157
HspAI GCGC 5 cut(s) 167, 201, 256, 432, 839
Kzo9I GATC 2 cut(s) 421, 1030
LmnI GCTCC 4 cut(s) 213, 676, 681, 1045
Lsp1109I GCAGC 4 cut(s) 256, 416, 512, 1117
MaeI CTAG 4 cut(s) 266, 561, 638, 950
MaeII ACGT 4 cut(s) 270, 312, 664, 1195
MaeIII GTNAC 4 cut(s) 645, 848, 1013, 1102
MalI GATC 2 cut(s) 423, 1032
MbiI CCGCTC 1 cut(s) 475
MboI GATC 2 cut(s) 421, 1030
MboII GAAGA 4 cut(s) 3, 826, 1021, 1133
MfeI CAATTG 1 cut(s) 1116
MhlI GDGCHC 3 cut(s) 378, 673, 1175
MlsI TGGCCA 1 cut(s) 1090
MluCI AATT 8 cut(s) 191, 232, 612, 728, 963, 1052, 1095, 1116
MluNI TGGCCA 1 cut(s) 1090
MlyI GAGTC 3 cut(s) 145, 563, 979
MmeI TCCRAC 1 cut(s) 167
Mox20I TGGCCA 1 cut(s) 1090
MscI TGGCCA 1 cut(s) 1090
MseI TTAA 2 cut(s) 479, 1201
MslI CAYNNNNRTG 2 cut(s) 521, 599
Msp20I TGGCCA 1 cut(s) 1090
MspA1I CMGCKG 2 cut(s) 211, 823
MspI CCGG 2 cut(s) 239, 1159
MspR9I CCNGG 3 cut(s) 49, 163, 675
MunI CAATTG 1 cut(s) 1116
MvaI CCWGG 3 cut(s) 49, 163, 675
MvnI CGCG 5 cut(s) 169, 201, 203, 258, 389
MwoI GCNNNNNNNGC 5 cut(s) 213, 253, 262, 557, 566
NdeII GATC 2 cut(s) 421, 1030
NlaIII CATG 5 cut(s) 346, 520, 569, 1037, 1157
NlaIV GGNNCC 6 cut(s) 215, 228, 514, 609, 672, 885
NmeAIII GCCGAG 1 cut(s) 273
NmuCI GTSAC 1 cut(s) 645
NspI RCATGY 1 cut(s) 569
PaeI GCATGC 1 cut(s) 569
PagI TCATGA 1 cut(s) 1153
PcsI WCGNNNNNNNCGW 1 cut(s) 378
PfeI GAWTC 3 cut(s) 31, 1066, 1078
PflMI CCANNNNNTGG 1 cut(s) 223
PkrI GCNGC 6 cut(s) 117, 246, 391, 431, 502, 1132
Ple19I CGATCG 1 cut(s) 424
PleI GAGTC 3 cut(s) 145, 562, 979
PmaCI CACGTG 1 cut(s) 665
PmlI CACGTG 1 cut(s) 665
PpsI GAGTC 3 cut(s) 145, 562, 979
Ppu21I YACGTR 1 cut(s) 665
Psp1406I AACGTT 1 cut(s) 1195
Psp6I CCWGG 3 cut(s) 47, 161, 673
PspCI CACGTG 1 cut(s) 665
PspFI CCCAGC 1 cut(s) 794
PspGI CCWGG 3 cut(s) 47, 161, 673
PspN4I GGNNCC 6 cut(s) 215, 228, 514, 609, 672, 885
PspPI GGNCC 7 cut(s) 51, 159, 171, 196, 205, 397, 608
PstNI CAGNNNCTG 2 cut(s) 223, 1048
PvuI CGATCG 1 cut(s) 424
RsaI GTAC 3 cut(s) 527, 808, 1140
RsaNI GTAC 3 cut(s) 526, 807, 1139
RseI CAYNNNNRTG 2 cut(s) 521, 599
SaqAI TTAA 2 cut(s) 479, 1201
SatI GCNGC 6 cut(s) 116, 245, 390, 430, 501, 1131
Sau3AI GATC 2 cut(s) 421, 1030
Sau96I GGNCC 7 cut(s) 51, 159, 171, 196, 205, 397, 608
SchI GAGTC 3 cut(s) 145, 563, 979
ScrFI CCNGG 3 cut(s) 49, 163, 675
SduI GDGCHC 3 cut(s) 378, 673, 1175
SinI GGWCC 4 cut(s) 51, 159, 196, 608
SmiMI CAYNNNNRTG 2 cut(s) 521, 599
SmlI CTYRAG 1 cut(s) 19
SmoI CTYRAG 1 cut(s) 19
SphI GCATGC 1 cut(s) 569
Sse9I AATT 8 cut(s) 191, 232, 612, 728, 963, 1052, 1095, 1116
SspMI CTAG 4 cut(s) 266, 561, 638, 950
StyD4I CCNGG 3 cut(s) 47, 161, 673
StyI CCWWGG 1 cut(s) 132
TaaI ACNGT 1 cut(s) 370
TaiI ACGT 4 cut(s) 273, 315, 667, 1198
TaqI TCGA 7 cut(s) 154, 335, 372, 405, 420, 827, 1060
TaqII GACCGA 1 cut(s) 26
TasI AATT 8 cut(s) 191, 232, 612, 728, 963, 1052, 1095, 1116
TatI WGTACW 2 cut(s) 525, 1138
TauI GCSGC 2 cut(s) 118, 392
TfiI GAWTC 3 cut(s) 31, 1066, 1078
Tru1I TTAA 2 cut(s) 479, 1201
Tru9I TTAA 2 cut(s) 479, 1201
TseFI GTSAC 1 cut(s) 645
TseI GCWGC 4 cut(s) 244, 429, 500, 1130
Tsp45I GTSAC 1 cut(s) 645
TspDTI ATGAA 2 cut(s) 480, 1022
TspGWI ACGGA 2 cut(s) 369, 370
Van91I CCANNNNNTGG 1 cut(s) 223
VpaK11BI GGWCC 4 cut(s) 51, 159, 196, 608
XagI CCTNNNNNAGG 1 cut(s) 905
XapI RAATTY 3 cut(s) 232, 728, 1052
XceI RCATGY 1 cut(s) 569
XcmI CCANNNNNNNNNTGG 2 cut(s) 452, 601
XspI CTAG 4 cut(s) 266, 561, 638, 950
ZraI GACGTC 1 cut(s) 271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.