Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0010695

Physical Location & Seq

Genomic Coordinates Forward (+)

1249078 .. 1250587

Gene Structure 1510 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G026700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 987 bp

ATGGCTACTTCAAAGCTTTTCTCATATCTCTTTCTCCAGCTGACCTTTATACTTTTTGTCCTTGACCTTGCAAATGCGCAGGGAGGGCTCAACGTCGGGTTTTATGCAAAGTCATGCCCCAAAGCTGAGGACATTGTGAAGAAAGTCATCTTTCAAACCATATCAACTACACCTTCACTTGCTGCTCCTTTGTTGAGAATGCATTTTCATGATTGTTTTGTTAGGGGTTGCGAAGGTTCGATACTATTGAACTCTTCCACCAACCAAGCTGAAAAAGATGCAATTCCAAACCTAAGTCTACGAGGATTTCAGATCATCGACAAAGCTAAGTCTGCTTTAGAAAAGGCATGCCCTGGAGTGGTTTCATGTGCAGACGTCTTAGCCATAACAGCTAGAGATGTGGTTTCCGCGCTCAATGGAGCACACTGGAACGTTGAAACAGGACGAAGAGATGGTAGAGTTTCCAATATAACAGAGGCCTTTATGAATCTACTACCACCCACTGCAAACATTACTATATTAAAAGCAGGCTTTGCACGAAAGGGTCTAAGCGCCAAAGATCTTGTAGTGCTATCAGGCGGGCACACTATTGGGACTTCTCACTGCACTGCCTTCAGCAACCGCCTTTACAACTTCACGGGGAAGGGCGATACTGATCCCACACTGGATCCCAACTACATTGCAAGATTGAAGTTGAAATGCAAACCCAATGATCAAAAGACTCTTGTGGAGATGGATCCGGGGAGTTTCAAGACATTCGACCAGACCTATTTCACTCTCGTGTCCAAGAGAAGGGGTCTCTTCCAATCCGATGCAGCTCTTCTTGATGACAGCGAGACAAAAGCTTACGTTCAAAGTCATGTTGCCGCCGTTGGAAAATCTAGTTTCTTTAAGGATTTCGGTGTTTCCATGGTGAACATGGGTAGGATTGGAGTTCTCACCGGTAACGCAGGGGAAATCAGGAAAGTTTGCAGCAAGATTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009636 GO:0009664 GO:0009987 GO:0016043 GO:0016209 GO:0016491 GO:0016684 GO:0030054 GO:0030312 GO:0042221 GO:0044464 GO:0045229 GO:0050896 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944 GO:0097237 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

329

Amino Acids

35.53

Weight (kDa)

9.2

Isoelectric Point (pI)

30.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010695)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01190 AT5G15180
fragaria_vesca	FvH4_3g02700
prunus_persica	Prupe.4G026700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0004041
rosa_laevigata	RLG00000031198 RLG00000031200
rosa_roxburghii	Rroxscaffold_1G00071930
rosa_rugosa	Rorug04G0409600 Rorug04G0409700
rosa_samantha	Rh5AG037000 Rh5AG037100 Rh5BG036000 Rh5BG036100 Rh5CG039700 Rh5CG039800 Rh5DG035600 Rh5DG035700
rosa_wichuraiana	Rw5G003350 Rw5G003360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	378
Acc16I	TGCGCA	1 cut(s)	78
AccI	GTMKAC	1 cut(s)	298
AccII	CGCG	1 cut(s)	410
AciI	CCGC	4 cut(s)	408, 579, 622, 867
AclI	AACGTT	1 cut(s)	432
AclWI	GGATC	5 cut(s)	650, 662, 675, 731, 744
AcuI	CTGAAG	1 cut(s)	598
AcyI	GRCGYC	1 cut(s)	375
AfiI	CCNNNNNNNGG	2 cut(s)	358, 792
AgeI	ACCGGT	1 cut(s)	941
AgsI	TTSAA	8 cut(s)	12, 155, 250, 437, 691, 697, 751, 854
AjnI	CCWGG	1 cut(s)	352
AleI	CACNNNNGTG	1 cut(s)	779
AluBI	AGCT	8 cut(s)	16, 40, 125, 269, 326, 392, 818, 845
AluI	AGCT	8 cut(s)	16, 40, 125, 269, 326, 392, 818, 845
Alw21I	GWGCWC	1 cut(s)	424
Alw26I	GTCTC	2 cut(s)	803, 830
AlwI	GGATC	5 cut(s)	650, 662, 675, 731, 744
AoxI	GGCC	1 cut(s)	477
ApeKI	GCWGC	3 cut(s)	182, 815, 972
AsiGI	ACCGGT	1 cut(s)	941
AspLEI	GCGC	3 cut(s)	79, 412, 554
AsuC2I	CCSGG	1 cut(s)	741
AsuHPI	GGTGA	2 cut(s)	925, 931
BaeGI	GKGCMC	1 cut(s)	585
BamHI	GGATCC	2 cut(s)	667, 736
BanII	GRGCYC	1 cut(s)	90
BarI	GAAGNNNNNNTAC	2 cut(s)	225, 257
BauI	CACGAG	1 cut(s)	779
Bbv12I	GWGCWC	1 cut(s)	424
BbvCI	CCTCAGC	1 cut(s)	126
BbvI	GCAGC	2 cut(s)	169, 827
BccI	CCATC	2 cut(s)	446, 727
BceAI	ACGGC	1 cut(s)	854
BciT130I	CCWGG	1 cut(s)	354
BclI	TGATCA	1 cut(s)	712
BcnI	CCSGG	1 cut(s)	741
BcoDI	GTCTC	2 cut(s)	803, 830
BfaI	CTAG	2 cut(s)	393, 882
BfoI	RGCGCY	1 cut(s)	555
BglII	AGATCT	1 cut(s)	559
BisI	GCNGC	4 cut(s)	183, 816, 867, 973
BlsI	GCNGC	4 cut(s)	184, 817, 868, 974
Bme1390I	CCNGG	2 cut(s)	354, 741
BmiI	GGNNCC	2 cut(s)	669, 738
BmrFI	CCNGG	2 cut(s)	354, 741
BmsI	GCATC	2 cut(s)	268, 802
BpmI	CTGGAG	2 cut(s)	20, 375
Bpu10I	CCTNAGC	1 cut(s)	126
BpuMI	CCSGG	1 cut(s)	741
BsaBI	GATNNNNATC	1 cut(s)	654
BsaHI	GRCGYC	1 cut(s)	375
BsaI	GGTCTC	1 cut(s)	803
BsaJI	CCNNGG	3 cut(s)	352, 740, 909
BsaWI	WCCGGW	1 cut(s)	941
Bsc4I	CCNNNNNNNGG	2 cut(s)	358, 792
Bse118I	RCCGGY	1 cut(s)	941
Bse1I	ACTGG	2 cut(s)	431, 669
Bse3DI	GCAATG	1 cut(s)	678
Bse8I	GATNNNNATC	1 cut(s)	654
BseBI	CCWGG	1 cut(s)	354
BseDI	CCNNGG	3 cut(s)	352, 740, 909
BseJI	GATNNNNATC	1 cut(s)	654
BseLI	CCNNNNNNNGG	2 cut(s)	358, 792
BseMI	GCAATG	1 cut(s)	678
BseMII	CTCAG	1 cut(s)	117
BseNI	ACTGG	2 cut(s)	431, 669
BseSI	GKGCMC	1 cut(s)	585
BseXI	GCAGC	2 cut(s)	169, 827
BsgI	GTGCAG	2 cut(s)	390, 589
Bsh1236I	CGCG	1 cut(s)	410
BshFI	GGCC	1 cut(s)	479
BshTI	ACCGGT	1 cut(s)	941
BsiHKAI	GWGCWC	1 cut(s)	424
BsiSI	CCGG	2 cut(s)	740, 942
BslFI	GGGAC	1 cut(s)	607
BslI	CCNNNNNNNGG	2 cut(s)	358, 792
BsmAI	GTCTC	2 cut(s)	803, 830
BsmFI	GGGAC	1 cut(s)	607
BsmI	GAATGC	1 cut(s)	204
BsnI	GGCC	1 cut(s)	479
Bso31I	GGTCTC	1 cut(s)	803
Bsp1286I	GDGCHC	3 cut(s)	90, 424, 585
Bsp143I	GATC	6 cut(s)	312, 559, 655, 667, 712, 736
Bsp19I	CCATGG	1 cut(s)	909
BspACI	CCGC	4 cut(s)	408, 579, 622, 867
BspANI	GGCC	1 cut(s)	479
BspCNI	CTCAG	1 cut(s)	118
BspFNI	CGCG	1 cut(s)	410
BspHI	TCATGA	1 cut(s)	208
BspLI	GGNNCC	2 cut(s)	669, 738
BspPI	GGATC	5 cut(s)	650, 662, 675, 731, 744
BspQI	GCTCTTC	1 cut(s)	825
BspTNI	GGTCTC	1 cut(s)	803
BsrDI	GCAATG	1 cut(s)	678
BsrFI	RCCGGY	1 cut(s)	941
BsrI	ACTGG	2 cut(s)	431, 669
BssAI	RCCGGY	1 cut(s)	941
BssECI	CCNNGG	3 cut(s)	352, 740, 909
BssMI	GATC	6 cut(s)	312, 559, 655, 667, 712, 736
BssNI	GRCGYC	1 cut(s)	375
BssSI	CACGAG	1 cut(s)	779
BssT1I	CCWWGG	1 cut(s)	909
Bst2BI	CACGAG	1 cut(s)	779
Bst2UI	CCWGG	1 cut(s)	354
Bst6I	CTCTTC	4 cut(s)	259, 442, 806, 825
BstACI	GRCGYC	1 cut(s)	375
BstAPI	GCANNNNNTGC	1 cut(s)	533
BstC8I	GCNNGC	3 cut(s)	349, 529, 581
BstDEI	CTNAG	5 cut(s)	126, 293, 327, 379, 548
BstDSI	CCRYGG	1 cut(s)	909
BstFNI	CGCG	1 cut(s)	410
BstH2I	RGCGCY	1 cut(s)	555
BstHHI	GCGC	3 cut(s)	79, 412, 554
BstKTI	GATC	6 cut(s)	315, 562, 658, 670, 715, 739
BstMAI	GTCTC	2 cut(s)	803, 830
BstMBI	GATC	6 cut(s)	312, 559, 655, 667, 712, 736
BstMWI	GCNNNNNNNGC	4 cut(s)	85, 332, 389, 533
BstNI	CCWGG	1 cut(s)	354
BstNSI	RCATGY	1 cut(s)	351
BstSCI	CCNGG	2 cut(s)	352, 739
BstSLI	GKGCMC	1 cut(s)	585
BstUI	CGCG	1 cut(s)	410
BstV1I	GCAGC	2 cut(s)	169, 827
BstX2I	RGATCY	3 cut(s)	559, 667, 736
BstYI	RGATCY	3 cut(s)	559, 667, 736
BsuRI	GGCC	1 cut(s)	479
BtgI	CCRYGG	1 cut(s)	909
BtsI	GCAGTG	3 cut(s)	501, 601, 606
BtsIMutI	CAGTG	5 cut(s)	424, 501, 601, 606, 662
Cac8I	GCNNGC	3 cut(s)	349, 529, 581
CciI	TCATGA	1 cut(s)	208
CfoI	GCGC	3 cut(s)	79, 412, 554
Cfr10I	RCCGGY	1 cut(s)	941
CspAI	ACCGGT	1 cut(s)	941
CviAII	CATG	7 cut(s)	114, 209, 348, 366, 860, 910, 919
DdeI	CTNAG	5 cut(s)	126, 293, 327, 379, 548
DpnI	GATC	6 cut(s)	314, 561, 657, 669, 714, 738
DpnII	GATC	6 cut(s)	312, 559, 655, 667, 712, 736
Eam1104I	CTCTTC	4 cut(s)	259, 442, 806, 825
EarI	CTCTTC	4 cut(s)	259, 442, 806, 825
Eco130I	CCWWGG	1 cut(s)	909
Eco147I	AGGCCT	1 cut(s)	479
Eco24I	GRGCYC	1 cut(s)	90
Eco31I	GGTCTC	1 cut(s)	803
Eco57I	CTGAAG	1 cut(s)	598
EcoRII	CCWGG	1 cut(s)	352
EcoT14I	CCWWGG	1 cut(s)	909
EcoT22I	ATGCAT	1 cut(s)	204
EcoT38I	GRGCYC	1 cut(s)	90
ErhI	CCWWGG	1 cut(s)	909
FaeI	CATG	7 cut(s)	117, 212, 351, 369, 863, 913, 922
FaqI	GGGAC	1 cut(s)	607
FatI	CATG	7 cut(s)	113, 208, 347, 365, 859, 909, 918
FauI	CCCGC	1 cut(s)	572
FbaI	TGATCA	1 cut(s)	712
FblI	GTMKAC	1 cut(s)	298
Fnu4HI	GCNGC	4 cut(s)	183, 816, 867, 973
FriOI	GRGCYC	1 cut(s)	90
Fsp4HI	GCNGC	4 cut(s)	183, 816, 867, 973
FspBI	CTAG	2 cut(s)	393, 882
FspI	TGCGCA	1 cut(s)	78
GlaI	GCGC	3 cut(s)	78, 411, 553
GluI	GCNGC	4 cut(s)	183, 816, 867, 973
GsuI	CTGGAG	2 cut(s)	20, 375
HaeII	RGCGCY	1 cut(s)	555
HaeIII	GGCC	1 cut(s)	479
HapII	CCGG	2 cut(s)	740, 942
HhaI	GCGC	3 cut(s)	79, 412, 554
Hin1I	GRCGYC	1 cut(s)	375
Hin1II	CATG	7 cut(s)	117, 212, 351, 369, 863, 913, 922
Hin6I	GCGC	3 cut(s)	77, 410, 552
HinP1I	GCGC	3 cut(s)	77, 410, 552
HindIII	AAGCTT	2 cut(s)	14, 843
HinfI	GANTC	2 cut(s)	487, 721
HpaII	CCGG	2 cut(s)	740, 942
HphI	GGTGA	2 cut(s)	925, 931
Hpy166II	GTNNAC	2 cut(s)	299, 916
Hpy188I	TCNGA	2 cut(s)	312, 811
Hpy188III	TCNNGA	4 cut(s)	209, 751, 824, 961
Hpy8I	GTNNAC	2 cut(s)	299, 916
Hpy99I	CGWCG	1 cut(s)	98
HpyAV	CCTTC	5 cut(s)	183, 227, 622, 637, 786
HpyCH4IV	ACGT	4 cut(s)	93, 375, 432, 849
HpyF10VI	GCNNNNNNNGC	4 cut(s)	85, 332, 389, 533
HpyF3I	CTNAG	5 cut(s)	126, 293, 327, 379, 548
HpySE526I	ACGT	4 cut(s)	93, 375, 432, 849
Hsp92I	GRCGYC	1 cut(s)	375
Hsp92II	CATG	7 cut(s)	117, 212, 351, 369, 863, 913, 922
HspAI	GCGC	3 cut(s)	77, 410, 552
Ksp22I	TGATCA	1 cut(s)	712
Kzo9I	GATC	6 cut(s)	312, 559, 655, 667, 712, 736
LguI	GCTCTTC	1 cut(s)	825
LmnI	GCTCC	2 cut(s)	190, 419
Lsp1109I	GCAGC	2 cut(s)	169, 827
LweI	GCATC	2 cut(s)	268, 802
MaeI	CTAG	2 cut(s)	393, 882
MaeII	ACGT	4 cut(s)	93, 375, 432, 849
MaeIII	GTNAC	1 cut(s)	944
MalI	GATC	6 cut(s)	314, 561, 657, 669, 714, 738
MboI	GATC	6 cut(s)	312, 559, 655, 667, 712, 736
MboII	GAAGA	5 cut(s)	151, 246, 459, 793, 812
MflI	RGATCY	3 cut(s)	559, 667, 736
MhlI	GDGCHC	3 cut(s)	90, 424, 585
MluCI	AATT	1 cut(s)	282
MlyI	GAGTC	1 cut(s)	715
MmeI	TCCRAC	1 cut(s)	853
MnlI	CCTC	4 cut(s)	77, 121, 296, 469
Mph1103I	ATGCAT	1 cut(s)	204
MseI	TTAA	3 cut(s)	521, 891, 981
MslI	CAYNNNNRTG	2 cut(s)	207, 779
MspA1I	CMGCKG	1 cut(s)	40
MspI	CCGG	2 cut(s)	740, 942
MspR9I	CCNGG	2 cut(s)	354, 741
Mva1269I	GAATGC	1 cut(s)	204
MvaI	CCWGG	1 cut(s)	354
MvnI	CGCG	1 cut(s)	410
MwoI	GCNNNNNNNGC	4 cut(s)	85, 332, 389, 533
NciI	CCSGG	1 cut(s)	741
NcoI	CCATGG	1 cut(s)	909
NdeII	GATC	6 cut(s)	312, 559, 655, 667, 712, 736
NlaIII	CATG	7 cut(s)	117, 212, 351, 369, 863, 913, 922
NlaIV	GGNNCC	2 cut(s)	669, 738
NsbI	TGCGCA	1 cut(s)	78
NsiI	ATGCAT	1 cut(s)	204
NspI	RCATGY	1 cut(s)	351
OliI	CACNNNNGTG	1 cut(s)	779
PaeI	GCATGC	1 cut(s)	351
PagI	TCATGA	1 cut(s)	208
PceI	AGGCCT	1 cut(s)	479
PciSI	GCTCTTC	1 cut(s)	825
PctI	GAATGC	1 cut(s)	204
PfeI	GAWTC	1 cut(s)	487
PinAI	ACCGGT	1 cut(s)	941
PkrI	GCNGC	4 cut(s)	184, 817, 868, 974
PleI	GAGTC	1 cut(s)	715
PpsI	GAGTC	1 cut(s)	715
Psp1406I	AACGTT	1 cut(s)	432
Psp6I	CCWGG	1 cut(s)	352
PspGI	CCWGG	1 cut(s)	352
PspN4I	GGNNCC	2 cut(s)	669, 738
PsuI	RGATCY	3 cut(s)	559, 667, 736
PvuII	CAGCTG	1 cut(s)	40
RseI	CAYNNNNRTG	2 cut(s)	207, 779
SapI	GCTCTTC	1 cut(s)	825
SaqAI	TTAA	3 cut(s)	521, 891, 981
SatI	GCNGC	4 cut(s)	183, 816, 867, 973
Sau3AI	GATC	6 cut(s)	312, 559, 655, 667, 712, 736
SchI	GAGTC	1 cut(s)	715
ScrFI	CCNGG	2 cut(s)	354, 741
SduI	GDGCHC	3 cut(s)	90, 424, 585
SfaNI	GCATC	2 cut(s)	268, 802
SmiMI	CAYNNNNRTG	2 cut(s)	207, 779
SphI	GCATGC	1 cut(s)	351
Sse9I	AATT	1 cut(s)	282
SseBI	AGGCCT	1 cut(s)	479
SsiI	CCGC	4 cut(s)	408, 579, 622, 867
SspMI	CTAG	2 cut(s)	393, 882
StuI	AGGCCT	1 cut(s)	479
StyD4I	CCNGG	2 cut(s)	352, 739
StyI	CCWWGG	1 cut(s)	909
TaiI	ACGT	4 cut(s)	96, 378, 435, 852
TaqI	TCGA	3 cut(s)	239, 318, 759
TasI	AATT	1 cut(s)	282
TauI	GCSGC	1 cut(s)	869
TfiI	GAWTC	1 cut(s)	487
Tru1I	TTAA	3 cut(s)	521, 891, 981
Tru9I	TTAA	3 cut(s)	521, 891, 981
TscAI	CASTG	5 cut(s)	431, 508, 608, 613, 669
TseI	GCWGC	3 cut(s)	182, 815, 972
TspDTI	ATGAA	3 cut(s)	197, 354, 500
TspRI	CASTG	5 cut(s)	431, 508, 608, 613, 669
XceI	RCATGY	1 cut(s)	351
XcmI	CCANNNNNNNNNTGG	1 cut(s)	916
XmiI	GTMKAC	1 cut(s)	298
XspI	CTAG	2 cut(s)	393, 882
ZraI	GACGTC	1 cut(s)	376
Zsp2I	ATGCAT	1 cut(s)	204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.