Prupe.4G075000_v2.0.a1

Pterin 4 alpha carbinolamine dehydratase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
3672849 .. 3675231
2383 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G075000.4

Sequence Viewer

Length: 534 bp
ATGAGTCGGCTGTTGCAGAAGGCGCCATTAACATCGGTGTTTCAAAGCTTGGTTGGAGCTTATGGACGTTCCAATAGCCGAGTGTTTGGGATACTTCAGAACAATATGGGAGTGTCATCTTGTAGAAAATCAGTTTGTGGATTTAGAGCTCTTTGTACTGCCAAAGATTTGTCAATAAAGAAGTGTGTCCCGTGCAACTCAAAGGATCTGCAACCCATGACTGAACAAGCAGCAAGTGATTTAATCACAAAGGTGGATGGATGGAATTTGGTGAGTGAAGGTGATGCATTGAGACTGAAAAAGTCATGGAAAGTTAAGACCTTCACAAAAGGACTGGAATTGTTTAAGCTCATAGCTGATGTTGCAGAAGCAGAAGGTCATCATCCAGACCTTCATCTTGTTGGATGGAACAATGTAACAGTAGAGATATGGACGCATGCAGTCGGCGGATTGACTGAGAACGACTTCATTCTTGCTGCTAAGATCAATGCACTCAACATGCAACATCTGTTGAGGCGGAATGCTACCAATTGA

Protein Analysis

178

Amino Acids

19.49

Weight (kDa)

9.32

Isoelectric Point (pI)

37.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 22
AciI CCGC 2 cut(s) 447, 517
AclWI GGATC 1 cut(s) 213
AcsI RAATTY 1 cut(s) 265
AcuI CTGAAG 1 cut(s) 80
AcyI GRCGYC 1 cut(s) 23
AfaI GTAC 1 cut(s) 157
AgsI TTSAA 1 cut(s) 44
AleI CACNNNNGTG 1 cut(s) 251
AluBI AGCT 5 cut(s) 48, 59, 149, 349, 356
AluI AGCT 5 cut(s) 48, 59, 149, 349, 356
Alw21I GWGCWC 1 cut(s) 151
Alw26I GTCTC 1 cut(s) 286
AlwI GGATC 1 cut(s) 213
ApeKI GCWGC 2 cut(s) 230, 476
ApoI RAATTY 1 cut(s) 265
Asp700I GAANNNNTTC 1 cut(s) 464
AspLEI GCGC 1 cut(s) 25
AsuHPI GGTGA 2 cut(s) 283, 293
BanI GGYRCC 1 cut(s) 22
BanII GRGCYC 1 cut(s) 151
Bbv12I GWGCWC 1 cut(s) 151
BbvI GCAGC 2 cut(s) 242, 463
BccI CCATC 3 cut(s) 251, 255, 399
BciVI GTATCC 1 cut(s) 84
BcoDI GTCTC 1 cut(s) 286
BfoI RGCGCY 1 cut(s) 26
BfuI GTATCC 1 cut(s) 84
BisI GCNGC 2 cut(s) 231, 477
BlsI GCNGC 2 cut(s) 232, 478
BmiI GGNNCC 1 cut(s) 24
BmsI GCATC 1 cut(s) 274
BsaHI GRCGYC 1 cut(s) 23
Bse1I ACTGG 1 cut(s) 339
BseGI GGATG 4 cut(s) 262, 266, 382, 410
BseMII CTCAG 1 cut(s) 447
BseNI ACTGG 1 cut(s) 339
BseXI GCAGC 2 cut(s) 242, 463
BshNI GGYRCC 1 cut(s) 22
BsiHKAI GWGCWC 1 cut(s) 151
BslFI GGGAC 1 cut(s) 173
BsmAI GTCTC 1 cut(s) 286
BsmFI GGGAC 1 cut(s) 173
BsmI GAATGC 1 cut(s) 526
Bsp1286I GDGCHC 1 cut(s) 151
Bsp143I GATC 2 cut(s) 205, 483
BspACI CCGC 2 cut(s) 447, 517
BspCNI CTCAG 1 cut(s) 448
BspLI GGNNCC 1 cut(s) 24
BspPI GGATC 1 cut(s) 213
BspT107I GGYRCC 1 cut(s) 22
BsrI ACTGG 1 cut(s) 339
BssMI GATC 2 cut(s) 205, 483
BssNI GRCGYC 1 cut(s) 23
Bst4CI ACNGT 1 cut(s) 421
BstACI GRCGYC 1 cut(s) 23
BstC8I GCNNGC 1 cut(s) 438
BstDEI CTNAG 2 cut(s) 456, 480
BstF5I GGATG 4 cut(s) 262, 266, 382, 410
BstH2I RGCGCY 1 cut(s) 26
BstHHI GCGC 1 cut(s) 25
BstKTI GATC 2 cut(s) 208, 486
BstMAI GTCTC 1 cut(s) 286
BstMBI GATC 2 cut(s) 205, 483
BstMWI GCNNNNNNNGC 2 cut(s) 22, 362
BstNSI RCATGY 2 cut(s) 440, 502
BstV1I GCAGC 2 cut(s) 242, 463
BstX2I RGATCY 1 cut(s) 205
BstYI RGATCY 1 cut(s) 205
BsuI GTATCC 1 cut(s) 84
BtsCI GGATG 4 cut(s) 262, 266, 382, 410
Cac8I GCNNGC 1 cut(s) 438
CfoI GCGC 1 cut(s) 25
CseI GACGC 1 cut(s) 442
Csp6I GTAC 1 cut(s) 156
CviAII CATG 4 cut(s) 217, 306, 437, 499
CviJI RGCY 7 cut(s) 10, 48, 59, 78, 149, 349, 356
CviKI_1 RGCY 7 cut(s) 10, 48, 59, 78, 149, 349, 356
CviQI GTAC 1 cut(s) 156
DdeI CTNAG 2 cut(s) 456, 480
DinI GGCGCC 1 cut(s) 24
DpnI GATC 2 cut(s) 207, 485
DpnII GATC 2 cut(s) 205, 483
EciI GGCGGA 2 cut(s) 462, 532
Ecl136II GAGCTC 1 cut(s) 149
Eco24I GRGCYC 1 cut(s) 151
Eco53kI GAGCTC 1 cut(s) 149
Eco57I CTGAAG 1 cut(s) 80
EcoICRI GAGCTC 1 cut(s) 149
EcoT22I ATGCAT 1 cut(s) 289
EcoT38I GRGCYC 1 cut(s) 151
EgeI GGCGCC 1 cut(s) 24
EheI GGCGCC 1 cut(s) 24
FaeI CATG 4 cut(s) 220, 309, 440, 502
FaiI YATR 8 cut(s) 63, 107, 218, 307, 353, 430, 438, 500
FaqI GGGAC 1 cut(s) 173
FatI CATG 4 cut(s) 216, 305, 436, 498
Fnu4HI GCNGC 2 cut(s) 231, 477
FokI GGATG 4 cut(s) 269, 273, 369, 417
FriOI GRGCYC 1 cut(s) 151
Fsp4HI GCNGC 2 cut(s) 231, 477
GlaI GCGC 1 cut(s) 24
GluI GCNGC 2 cut(s) 231, 477
HaeII RGCGCY 1 cut(s) 26
HgaI GACGC 1 cut(s) 442
HhaI GCGC 1 cut(s) 25
Hin1I GRCGYC 1 cut(s) 23
Hin1II CATG 4 cut(s) 220, 309, 440, 502
Hin6I GCGC 1 cut(s) 23
HinP1I GCGC 1 cut(s) 23
HindIII AAGCTT 1 cut(s) 46
HinfI GANTC 1 cut(s) 4
HphI GGTGA 2 cut(s) 283, 293
Hpy188I TCNGA 1 cut(s) 99
Hpy188III TCNNGA 1 cut(s) 386
HpyAV CCTTC 5 cut(s) 13, 272, 331, 368, 401
HpyCH4III ACNGT 1 cut(s) 421
HpyCH4IV ACGT 1 cut(s) 67
HpyCH4V TGCA 8 cut(s) 16, 195, 211, 287, 365, 440, 491, 502
HpyF10VI GCNNNNNNNGC 2 cut(s) 22, 362
HpyF3I CTNAG 2 cut(s) 456, 480
HpySE526I ACGT 1 cut(s) 67
Hsp92I GRCGYC 1 cut(s) 23
Hsp92II CATG 4 cut(s) 220, 309, 440, 502
HspAI GCGC 1 cut(s) 23
KasI GGCGCC 1 cut(s) 22
Kzo9I GATC 2 cut(s) 205, 483
LmnI GCTCC 1 cut(s) 56
LpnPI CCDG 2 cut(s) 320, 399
Lsp1109I GCAGC 2 cut(s) 242, 463
LweI GCATC 1 cut(s) 274
MaeII ACGT 1 cut(s) 67
MaeIII GTNAC 1 cut(s) 415
MalI GATC 2 cut(s) 207, 485
MboI GATC 2 cut(s) 205, 483
MfeI CAATTG 1 cut(s) 529
MflI RGATCY 1 cut(s) 205
MhlI GDGCHC 1 cut(s) 151
MluCI AATT 3 cut(s) 265, 338, 529
Mly113I GGCGCC 1 cut(s) 23
MlyI GAGTC 1 cut(s) 13
MmeI TCCRAC 2 cut(s) 34, 382
MnlI CCTC 1 cut(s) 507
Mph1103I ATGCAT 1 cut(s) 289
MroXI GAANNNNTTC 1 cut(s) 464
MseI TTAA 4 cut(s) 29, 242, 315, 345
MslI CAYNNNNRTG 1 cut(s) 251
MunI CAATTG 1 cut(s) 529
Mva1269I GAATGC 1 cut(s) 526
MwoI GCNNNNNNNGC 2 cut(s) 22, 362
NarI GGCGCC 1 cut(s) 23
NdeII GATC 2 cut(s) 205, 483
NlaIII CATG 4 cut(s) 220, 309, 440, 502
NlaIV GGNNCC 1 cut(s) 24
NmeAIII GCCGAG 1 cut(s) 104
NsiI ATGCAT 1 cut(s) 289
NspI RCATGY 2 cut(s) 440, 502
OliI CACNNNNGTG 1 cut(s) 251
PaeI GCATGC 1 cut(s) 440
PctI GAATGC 1 cut(s) 526
PdmI GAANNNNTTC 1 cut(s) 464
PkrI GCNGC 2 cut(s) 232, 478
PleI GAGTC 1 cut(s) 12
PluTI GGCGCC 1 cut(s) 26
PpsI GAGTC 1 cut(s) 12
Psp124BI GAGCTC 1 cut(s) 151
PspN4I GGNNCC 1 cut(s) 24
PsuI RGATCY 1 cut(s) 205
RsaI GTAC 1 cut(s) 157
RsaNI GTAC 1 cut(s) 156
RseI CAYNNNNRTG 1 cut(s) 251
SacI GAGCTC 1 cut(s) 151
SaqAI TTAA 4 cut(s) 29, 242, 315, 345
SatI GCNGC 2 cut(s) 231, 477
Sau3AI GATC 2 cut(s) 205, 483
SchI GAGTC 1 cut(s) 13
SduI GDGCHC 1 cut(s) 151
SfaNI GCATC 1 cut(s) 274
SfoI GGCGCC 1 cut(s) 24
SmiMI CAYNNNNRTG 1 cut(s) 251
SphI GCATGC 1 cut(s) 440
Sse9I AATT 3 cut(s) 265, 338, 529
SsiI CCGC 2 cut(s) 447, 517
SspDI GGCGCC 1 cut(s) 22
SstI GAGCTC 1 cut(s) 151
TaaI ACNGT 1 cut(s) 421
TaiI ACGT 1 cut(s) 70
TasI AATT 3 cut(s) 265, 338, 529
TatI WGTACW 1 cut(s) 155
Tru1I TTAA 4 cut(s) 29, 242, 315, 345
Tru9I TTAA 4 cut(s) 29, 242, 315, 345
TseI GCWGC 2 cut(s) 230, 476
TspDTI ATGAA 2 cut(s) 383, 457
XapI RAATTY 1 cut(s) 265
XceI RCATGY 2 cut(s) 440, 502
XmnI GAANNNNTTC 1 cut(s) 464
Zsp2I ATGCAT 1 cut(s) 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.