Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0007841

Physical Location & Seq

Genomic Coordinates Reverse (-)

5144563 .. 5147849

Gene Structure 3287 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G101000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 891 bp

ATGTACAAGCTGAGACACTTGTGTCTGAGCCAACAATGCTCGTTCATGGCGATGACATCTCTGAGACTGATGCGGGTAATGACCAAAAGGGCCTCATTTTCTTCTTCTGCTGTGAAATGGGAAGGTGGGGTTTCCATGGTGCAGGGTGCATCCAGAGGAATTGGCCTTGAATTCGTTAAACAGTTATTGGAGAAGGAAAAAGGTCATGTTATTGCCAGTTGCCGTAATCCTAATGGGGCAACAAGTCTTCTTCATCTGAAAAGTAAATTTGCTGAACGGCTCAGCATTCTACAATTGGACGTGACCAATGAAAGCACCATAGAGGAATCTGCCAAGTCTATCAGTGAAAAATATGGGTCTTTAAACCTTCTCATTAATGCATCTGGGATTCTTTCCATACCTCAAGTACTGCAACCAGAAACGACGTTGAGGAAAGTAGAGAAGTCATCTTTGCTGCTTGCTTATGAGGTTAATGCTGTAGGCCCTATTTTAGTAATCAAGCATATGTGGCCTCTCTTAAAGGATGGAGGCGGCTTGGGAACTGAAAGGGATGTCGCAGTTGTGGCCAACTTAAGTGCCAGAGTGGGTTCCATAGGTGATAATCGCCTTGGGGGTTGGCATTCTTATCGAGCTTCAAAATCTGCACTTAATCAACTGACAAAAAATATATCGGTGGAATTTGCACGAAGGAAGGATCCAATTACGTGCATTTTATTGCACCCAGGTACAGTGGACACAGATCTCTCCAGGCCATTTCAGAGAAATGTTCCTGAAGACAAACTTTTCACAACAGAATTCTCAGTACAGAAGCTCTTAAGCATCATCCACAATGCCAAAAGCCATGATAATGGAAAGTTTTTCGCCTGGGATGGTCAGGAAATTCCTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009636 GO:0009987 GO:0010033 GO:0016491 GO:0042221 GO:0050896 GO:0051716 GO:0055114 GO:0070887 GO:0097237 GO:0098754 GO:0110095 GO:0110096 GO:1901700 GO:1901701 GO:1990748

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

adh_short

Protein Analysis

297

Amino Acids

32.75

Weight (kDa)

9.49

Isoelectric Point (pI)

36.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007841)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20760 AT4G20760
fragaria_vesca	FvH4_3g11150 FvH4_3g11150 FvH4_3g11150 FvH4_3g11150 FvH4_3g11150 FvH4_3g11150 FvH4_3g11150
malus_domestica	MD10G1243100.v1.1
prunus_persica	Prupe.4G101000_v2.0.a1 Prupe.4G101000_v2.0.a1 Prupe.4G101000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0018051
rosa_laevigata	RLG00000032336
rosa_multiflora	Rmu_co8056702.1_g000001 Rmu_sc0010280.1_g000016
rosa_roxburghii	Rroxscaffold_1G00059570
rosa_rugosa	Rorug05G0040100
rosa_samantha	Rh5AG132900 Rh5BG131400 Rh5CG143400 Rh5DG133100
rosa_wichuraiana	Rw5G011570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	21
AciI	CCGC	2 cut(s)	73, 531
AclWI	GGATC	2 cut(s)	689, 702
AcoI	YGGCCR	1 cut(s)	564
AcsI	RAATTY	5 cut(s)	170, 266, 677, 794, 879
AcuI	CTGAAG	1 cut(s)	792
AfaI	GTAC	4 cut(s)	5, 408, 727, 804
AflII	CTTAAG	2 cut(s)	571, 814
AgsI	TTSAA	2 cut(s)	170, 636
AjiI	CACGTC	1 cut(s)	301
AjnI	CCWGG	3 cut(s)	721, 746, 863
AluBI	AGCT	3 cut(s)	10, 632, 811
AluI	AGCT	3 cut(s)	10, 632, 811
Alw26I	GTCTC	2 cut(s)	7, 58
AlwI	GGATC	2 cut(s)	689, 702
AoxI	GGCC	6 cut(s)	90, 163, 481, 509, 564, 749
ApeKI	GCWGC	1 cut(s)	454
ApoI	RAATTY	5 cut(s)	170, 266, 677, 794, 879
AseI	ATTAAT	1 cut(s)	375
AspS9I	GGNCC	2 cut(s)	90, 482
AsuHPI	GGTGA	1 cut(s)	608
BalI	TGGCCA	1 cut(s)	566
BamHI	GGATCC	1 cut(s)	694
BbsI	GAAGAC	2 cut(s)	239, 780
BbvI	GCAGC	1 cut(s)	441
BccI	CCATC	2 cut(s)	518, 863
BceAI	ACGGC	2 cut(s)	207, 293
BcgI	CGANNNNNNTGC	2 cut(s)	608, 642
BciT130I	CCWGG	3 cut(s)	723, 748, 865
BcoDI	GTCTC	2 cut(s)	7, 58
BfmI	CTRYAG	1 cut(s)	477
BfrI	CTTAAG	2 cut(s)	571, 814
BglII	AGATCT	1 cut(s)	739
BisI	GCNGC	2 cut(s)	455, 532
BlpI	GCTNAGC	1 cut(s)	281
BlsI	GCNGC	2 cut(s)	456, 533
BmcAI	AGTACT	1 cut(s)	408
Bme1390I	CCNGG	3 cut(s)	723, 748, 865
BmgBI	CACGTC	1 cut(s)	301
BmgT120I	GGNCC	2 cut(s)	90, 482
BmiI	GGNNCC	2 cut(s)	589, 696
BmrFI	CCNGG	3 cut(s)	723, 748, 865
BmsI	GCATC	4 cut(s)	60, 158, 389, 828
BpiI	GAAGAC	2 cut(s)	239, 780
BpmI	CTGGAG	1 cut(s)	730
Bpu1102I	GCTNAGC	1 cut(s)	281
BpuEI	CTTGAG	1 cut(s)	387
BsaAI	YACGTR	1 cut(s)	705
BsaJI	CCNNGG	5 cut(s)	135, 607, 721, 864, 884
Bse1I	ACTGG	1 cut(s)	216
BseBI	CCWGG	3 cut(s)	723, 748, 865
BseDI	CCNNGG	5 cut(s)	135, 607, 721, 864, 884
BseGI	GGATG	5 cut(s)	149, 529, 556, 822, 874
BseMII	CTCAG	4 cut(s)	17, 53, 295, 813
BseNI	ACTGG	1 cut(s)	216
BseXI	GCAGC	1 cut(s)	441
BsgI	GTGCAG	2 cut(s)	161, 627
BshFI	GGCC	6 cut(s)	92, 165, 483, 511, 566, 751
BsmAI	GTCTC	2 cut(s)	7, 58
BsmI	GAATGC	2 cut(s)	285, 619
BsnI	GGCC	6 cut(s)	92, 165, 483, 511, 566, 751
Bsp1407I	TGTACA	1 cut(s)	3
Bsp143I	GATC	2 cut(s)	694, 739
Bsp1720I	GCTNAGC	1 cut(s)	281
Bsp19I	CCATGG	1 cut(s)	135
BspACI	CCGC	2 cut(s)	73, 531
BspANI	GGCC	6 cut(s)	92, 165, 483, 511, 566, 751
BspCNI	CTCAG	4 cut(s)	18, 54, 294, 812
BspLI	GGNNCC	2 cut(s)	589, 696
BspPI	GGATC	2 cut(s)	689, 702
BspTI	CTTAAG	2 cut(s)	571, 814
BsrGI	TGTACA	1 cut(s)	3
BsrI	ACTGG	1 cut(s)	216
BssECI	CCNNGG	5 cut(s)	135, 607, 721, 864, 884
BssMI	GATC	2 cut(s)	694, 739
BssT1I	CCWWGG	3 cut(s)	135, 607, 884
Bst2UI	CCWGG	3 cut(s)	723, 748, 865
Bst4CI	ACNGT	2 cut(s)	183, 730
BstAFI	CTTAAG	2 cut(s)	571, 814
BstAUI	TGTACA	1 cut(s)	3
BstBAI	YACGTR	1 cut(s)	705
BstC8I	GCNNGC	1 cut(s)	459
BstDEI	CTNAG	5 cut(s)	11, 26, 62, 281, 799
BstDSI	CCRYGG	1 cut(s)	135
BstF5I	GGATG	5 cut(s)	149, 529, 556, 822, 874
BstKTI	GATC	2 cut(s)	697, 742
BstMAI	GTCTC	2 cut(s)	7, 58
BstMBI	GATC	2 cut(s)	694, 739
BstMWI	GCNNNNNNNGC	3 cut(s)	36, 508, 563
BstNI	CCWGG	3 cut(s)	723, 748, 865
BstSCI	CCNGG	3 cut(s)	721, 746, 863
BstSFI	CTRYAG	1 cut(s)	477
BstV1I	GCAGC	1 cut(s)	441
BstV2I	GAAGAC	2 cut(s)	239, 780
BstX2I	RGATCY	2 cut(s)	694, 739
BstXI	CCANNNNNNTGG	1 cut(s)	848
BstYI	RGATCY	2 cut(s)	694, 739
BsuRI	GGCC	6 cut(s)	92, 165, 483, 511, 566, 751
BtgI	CCRYGG	1 cut(s)	135
BtgZI	GCGATG	1 cut(s)	65
BtrI	CACGTC	1 cut(s)	301
BtsCI	GGATG	5 cut(s)	149, 529, 556, 822, 874
BtsIMutI	CAGTG	2 cut(s)	349, 735
Cac8I	GCNNGC	1 cut(s)	459
Cfr13I	GGNCC	2 cut(s)	90, 482
Csp6I	GTAC	4 cut(s)	4, 407, 726, 803
CviAII	CATG	4 cut(s)	46, 136, 206, 842
CviQI	GTAC	4 cut(s)	4, 407, 726, 803
DdeI	CTNAG	5 cut(s)	11, 26, 62, 281, 799
DpnI	GATC	2 cut(s)	696, 741
DpnII	GATC	2 cut(s)	694, 739
DraI	TTTAAA	1 cut(s)	363
DrdI	GACNNNNNNGTC	1 cut(s)	21
DseDI	GACNNNNNNGTC	1 cut(s)	21
EaeI	YGGCCR	1 cut(s)	564
Eco130I	CCWWGG	3 cut(s)	135, 607, 884
Eco57I	CTGAAG	1 cut(s)	792
EcoO109I	RGGNCCY	2 cut(s)	90, 482
EcoRI	GAATTC	2 cut(s)	170, 794
EcoRII	CCWGG	3 cut(s)	721, 746, 863
EcoT14I	CCWWGG	3 cut(s)	135, 607, 884
EcoT22I	ATGCAT	1 cut(s)	382
ErhI	CCWWGG	3 cut(s)	135, 607, 884
FaeI	CATG	4 cut(s)	49, 139, 209, 845
FalI	AAGNNNNNCTT	2 cut(s)	765, 797
FatI	CATG	4 cut(s)	45, 135, 205, 841
FauI	CCCGC	1 cut(s)	66
FauNDI	CATATG	1 cut(s)	504
Fnu4HI	GCNGC	2 cut(s)	455, 532
FokI	GGATG	5 cut(s)	136, 536, 563, 809, 881
Fsp4HI	GCNGC	2 cut(s)	455, 532
GluI	GCNGC	2 cut(s)	455, 532
GsuI	CTGGAG	1 cut(s)	730
HaeIII	GGCC	6 cut(s)	92, 165, 483, 511, 566, 751
Hin1II	CATG	4 cut(s)	49, 139, 209, 845
HinfI	GANTC	2 cut(s)	326, 388
HphI	GGTGA	1 cut(s)	608
Hpy166II	GTNNAC	1 cut(s)	733
Hpy188I	TCNGA	4 cut(s)	27, 63, 258, 759
Hpy188III	TCNNGA	3 cut(s)	153, 770, 875
Hpy8I	GTNNAC	1 cut(s)	733
Hpy99I	CGWCG	1 cut(s)	427
HpyAV	CCTTC	5 cut(s)	116, 187, 377, 681, 685
HpyCH4III	ACNGT	2 cut(s)	183, 730
HpyCH4IV	ACGT	3 cut(s)	300, 425, 704
HpyCH4V	TGCA	8 cut(s)	142, 149, 380, 412, 644, 683, 708, 718
HpyF10VI	GCNNNNNNNGC	3 cut(s)	36, 508, 563
HpyF3I	CTNAG	5 cut(s)	11, 26, 62, 281, 799
HpySE526I	ACGT	3 cut(s)	300, 425, 704
Hsp92II	CATG	4 cut(s)	49, 139, 209, 845
Kzo9I	GATC	2 cut(s)	694, 739
Lsp1109I	GCAGC	1 cut(s)	441
LweI	GCATC	4 cut(s)	60, 158, 389, 828
MaeII	ACGT	3 cut(s)	300, 425, 704
MaeIII	GTNAC	1 cut(s)	301
MalI	GATC	2 cut(s)	696, 741
MboI	GATC	2 cut(s)	694, 739
MboII	GAAGA	5 cut(s)	93, 96, 239, 242, 785
MfeI	CAATTG	1 cut(s)	293
MflI	RGATCY	2 cut(s)	694, 739
MlsI	TGGCCA	1 cut(s)	566
MluCI	AATT	8 cut(s)	159, 170, 266, 293, 677, 699, 794, 879
MluNI	TGGCCA	1 cut(s)	566
MnlI	CCTC	8 cut(s)	103, 149, 316, 411, 423, 460, 521, 522
Mox20I	TGGCCA	1 cut(s)	566
Mph1103I	ATGCAT	1 cut(s)	382
MscI	TGGCCA	1 cut(s)	566
MseI	TTAA	8 cut(s)	177, 362, 375, 471, 518, 572, 648, 815
MslI	CAYNNNNRTG	2 cut(s)	50, 846
Msp20I	TGGCCA	1 cut(s)	566
MspCI	CTTAAG	2 cut(s)	571, 814
MspR9I	CCNGG	3 cut(s)	723, 748, 865
MunI	CAATTG	1 cut(s)	293
Mva1269I	GAATGC	2 cut(s)	285, 619
MvaI	CCWGG	3 cut(s)	723, 748, 865
MwoI	GCNNNNNNNGC	3 cut(s)	36, 508, 563
NcoI	CCATGG	1 cut(s)	135
NdeI	CATATG	1 cut(s)	504
NdeII	GATC	2 cut(s)	694, 739
NlaIII	CATG	4 cut(s)	49, 139, 209, 845
NlaIV	GGNNCC	2 cut(s)	589, 696
NmuCI	GTSAC	1 cut(s)	301
NsiI	ATGCAT	1 cut(s)	382
PcsI	WCGNNNNNNNCGW	1 cut(s)	47
PctI	GAATGC	2 cut(s)	285, 619
PfeI	GAWTC	2 cut(s)	326, 388
PkrI	GCNGC	2 cut(s)	456, 533
Ppu21I	YACGTR	1 cut(s)	705
PshBI	ATTAAT	1 cut(s)	375
Psp6I	CCWGG	3 cut(s)	721, 746, 863
PspGI	CCWGG	3 cut(s)	721, 746, 863
PspN4I	GGNNCC	2 cut(s)	589, 696
PspPI	GGNCC	2 cut(s)	90, 482
PsuI	RGATCY	2 cut(s)	694, 739
RsaI	GTAC	4 cut(s)	5, 408, 727, 804
RsaNI	GTAC	4 cut(s)	4, 407, 726, 803
RseI	CAYNNNNRTG	2 cut(s)	50, 846
SaqAI	TTAA	8 cut(s)	177, 362, 375, 471, 518, 572, 648, 815
SatI	GCNGC	2 cut(s)	455, 532
Sau3AI	GATC	2 cut(s)	694, 739
Sau96I	GGNCC	2 cut(s)	90, 482
ScaI	AGTACT	1 cut(s)	408
ScrFI	CCNGG	3 cut(s)	723, 748, 865
SfaNI	GCATC	4 cut(s)	60, 158, 389, 828
SfcI	CTRYAG	1 cut(s)	477
SmiMI	CAYNNNNRTG	2 cut(s)	50, 846
SmlI	CTYRAG	3 cut(s)	402, 571, 814
SmoI	CTYRAG	3 cut(s)	402, 571, 814
Sse9I	AATT	8 cut(s)	159, 170, 266, 293, 677, 699, 794, 879
SsiI	CCGC	2 cut(s)	73, 531
StyD4I	CCNGG	3 cut(s)	721, 746, 863
StyI	CCWWGG	3 cut(s)	135, 607, 884
TaaI	ACNGT	2 cut(s)	183, 730
TaiI	ACGT	3 cut(s)	303, 428, 707
TaqI	TCGA	1 cut(s)	628
TasI	AATT	8 cut(s)	159, 170, 266, 293, 677, 699, 794, 879
TatI	WGTACW	3 cut(s)	3, 406, 802
TauI	GCSGC	1 cut(s)	534
TfiI	GAWTC	2 cut(s)	326, 388
Tru1I	TTAA	8 cut(s)	177, 362, 375, 471, 518, 572, 648, 815
Tru9I	TTAA	8 cut(s)	177, 362, 375, 471, 518, 572, 648, 815
TscAI	CASTG	2 cut(s)	349, 735
TseFI	GTSAC	1 cut(s)	301
TseI	GCWGC	1 cut(s)	454
Tsp45I	GTSAC	1 cut(s)	301
TspDTI	ATGAA	3 cut(s)	34, 242, 324
TspRI	CASTG	2 cut(s)	349, 735
Vha464I	CTTAAG	2 cut(s)	571, 814
VspI	ATTAAT	1 cut(s)	375
XapI	RAATTY	5 cut(s)	170, 266, 677, 794, 879
ZrmI	AGTACT	1 cut(s)	408
Zsp2I	ATGCAT	1 cut(s)	382

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.