Prupe.4G104800_v2.0.a1

Acyl-coenzyme A thioesterase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
5413156 .. 5413628
473 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G104800.1

Sequence Viewer

Length: 372 bp
ATGAAAGGAATTCAAGTCGATCTCCTTGAACCCGATCGTATTGTTTGCTCCTTCAAAGTAACACCACCCCTCCCTCCTCTGCTGAATGGAGGCAATTTTATGCATGGTGGAGCCACAGCAACCCTTGTGGATTTGATAGGGTCAGCTGCAATCCTCACCGTCGGAACTCCCAGCTTTGGAGTTTCAGTGGAGATCAACGTTTCATACTTGGATTCTGCTTACCCTGGTGAGGAAGTTGAGGTTGAGGCCAAGGCTTTACGAGTTGGGAAGGCTGTTGGTGTTGCCAGTGTTGAGTTAAGGAAGAAGAAGACAGGCAAAATTATAGCTCAGGGCCATCATACCAAGTATCTTGCTCTTGCTAGCAAACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

124

Amino Acids

12.88

Weight (kDa)

8.74

Isoelectric Point (pI)

14.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 198
AcsI RAATTY 1 cut(s) 9
AfiI CCNNNNNNNGG 2 cut(s) 176, 229
AgsI TTSAA 3 cut(s) 14, 29, 55
AjnI CCWGG 1 cut(s) 223
AluBI AGCT 3 cut(s) 146, 174, 326
AluI AGCT 3 cut(s) 146, 174, 326
AoxI GGCC 2 cut(s) 246, 331
ApeKI GCWGC 1 cut(s) 146
ApoI RAATTY 1 cut(s) 9
AspS9I GGNCC 1 cut(s) 331
AsuHPI GGTGA 2 cut(s) 148, 239
AsuNHI GCTAGC 1 cut(s) 359
BbsI GAAGAC 1 cut(s) 314
BbvI GCAGC 1 cut(s) 133
BccI CCATC 1 cut(s) 342
BciT130I CCWGG 1 cut(s) 225
BfaI CTAG 1 cut(s) 360
BisI GCNGC 1 cut(s) 147
BlsI GCNGC 1 cut(s) 148
Bme1390I CCNGG 1 cut(s) 225
BmgT120I GGNCC 1 cut(s) 331
BmiI GGNNCC 1 cut(s) 112
BmrFI CCNGG 1 cut(s) 225
BmtI GCTAGC 1 cut(s) 363
BpiI GAAGAC 1 cut(s) 314
Bpu10I CCTNAGC 1 cut(s) 327
BsaJI CCNNGG 2 cut(s) 223, 249
BsaXI ACNNNNNCTCC 4 cut(s) 54, 84, 171, 201
Bsc4I CCNNNNNNNGG 2 cut(s) 176, 229
Bse1I ACTGG 1 cut(s) 285
BseBI CCWGG 1 cut(s) 225
BseDI CCNNGG 2 cut(s) 223, 249
BseLI CCNNNNNNNGG 2 cut(s) 176, 229
BseMII CTCAG 1 cut(s) 341
BseNI ACTGG 1 cut(s) 285
BseRI GAGGAG 1 cut(s) 66
BseXI GCAGC 1 cut(s) 133
BseYI CCCAGC 1 cut(s) 170
Bsh1285I CGRYCG 1 cut(s) 37
BshFI GGCC 2 cut(s) 248, 333
BsiEI CGRYCG 1 cut(s) 37
BslI CCNNNNNNNGG 2 cut(s) 176, 229
BsnI GGCC 2 cut(s) 248, 333
Bsp143I GATC 3 cut(s) 19, 34, 192
BspANI GGCC 2 cut(s) 248, 333
BspCNI CTCAG 1 cut(s) 340
BspLI GGNNCC 1 cut(s) 112
BspOI GCTAGC 1 cut(s) 363
BsrI ACTGG 1 cut(s) 285
BssECI CCNNGG 2 cut(s) 223, 249
BssMI GATC 3 cut(s) 19, 34, 192
BssT1I CCWWGG 1 cut(s) 249
Bst2UI CCWGG 1 cut(s) 225
Bst4CI ACNGT 1 cut(s) 160
BstC8I GCNNGC 1 cut(s) 361
BstDEI CTNAG 1 cut(s) 327
BstKTI GATC 3 cut(s) 22, 37, 195
BstMBI GATC 3 cut(s) 19, 34, 192
BstMCI CGRYCG 1 cut(s) 37
BstNI CCWGG 1 cut(s) 225
BstSCI CCNGG 1 cut(s) 223
BstV1I GCAGC 1 cut(s) 133
BstV2I GAAGAC 1 cut(s) 314
BsuRI GGCC 2 cut(s) 248, 333
BtsIMutI CAGTG 2 cut(s) 192, 292
Cac8I GCNNGC 1 cut(s) 361
Cfr13I GGNCC 1 cut(s) 331
CspCI CAANNNNNGTGG 2 cut(s) 108, 143
CviAII CATG 1 cut(s) 104
CviJI RGCY 8 cut(s) 113, 146, 174, 248, 254, 272, 326, 333
CviKI_1 RGCY 8 cut(s) 113, 146, 174, 248, 254, 272, 326, 333
DdeI CTNAG 1 cut(s) 327
DpnI GATC 3 cut(s) 21, 36, 194
DpnII GATC 3 cut(s) 19, 34, 192
Eco130I CCWWGG 1 cut(s) 249
EcoRI GAATTC 1 cut(s) 9
EcoRII CCWGG 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 249
EcoT22I ATGCAT 1 cut(s) 105
ErhI CCWWGG 1 cut(s) 249
FaeI CATG 1 cut(s) 107
FaiI YATR 5 cut(s) 101, 105, 205, 323, 339
FatI CATG 1 cut(s) 103
Fnu4HI GCNGC 1 cut(s) 147
Fsp4HI GCNGC 1 cut(s) 147
FspBI CTAG 1 cut(s) 360
GluI GCNGC 1 cut(s) 147
GsaI CCCAGC 1 cut(s) 174
HaeIII GGCC 2 cut(s) 248, 333
Hin1II CATG 1 cut(s) 107
HinfI GANTC 1 cut(s) 212
HphI GGTGA 2 cut(s) 148, 239
Hpy188I TCNGA 2 cut(s) 164, 371
Hpy99I CGWCG 1 cut(s) 164
HpyAV CCTTC 2 cut(s) 61, 262
HpyCH4III ACNGT 1 cut(s) 160
HpyCH4IV ACGT 1 cut(s) 198
HpyCH4V TGCA 2 cut(s) 103, 149
HpyF3I CTNAG 1 cut(s) 327
HpySE526I ACGT 1 cut(s) 198
Hsp92II CATG 1 cut(s) 107
Kzo9I GATC 3 cut(s) 19, 34, 192
LmnI GCTCC 2 cut(s) 53, 110
LpnPI CCDG 6 cut(s) 184, 210, 237, 297, 298, 314
Lsp1109I GCAGC 1 cut(s) 133
MaeI CTAG 1 cut(s) 360
MaeII ACGT 1 cut(s) 198
MaeIII GTNAC 1 cut(s) 58
MalI GATC 3 cut(s) 21, 36, 194
MboI GATC 3 cut(s) 19, 34, 192
MboII GAAGA 3 cut(s) 313, 316, 319
MluCI AATT 3 cut(s) 9, 94, 318
MmeI TCCRAC 1 cut(s) 142
MnlI CCTC 8 cut(s) 80, 83, 84, 87, 164, 223, 232, 238
Mph1103I ATGCAT 1 cut(s) 105
MseI TTAA 1 cut(s) 296
MspA1I CMGCKG 1 cut(s) 146
MspR9I CCNGG 1 cut(s) 225
MvaI CCWGG 1 cut(s) 225
NdeII GATC 3 cut(s) 19, 34, 192
NheI GCTAGC 1 cut(s) 359
NlaIII CATG 1 cut(s) 107
NlaIV GGNNCC 1 cut(s) 112
NsiI ATGCAT 1 cut(s) 105
PfeI GAWTC 1 cut(s) 212
PkrI GCNGC 1 cut(s) 148
Ple19I CGATCG 1 cut(s) 37
Psp1406I AACGTT 1 cut(s) 198
Psp6I CCWGG 1 cut(s) 223
PspFI CCCAGC 1 cut(s) 170
PspGI CCWGG 1 cut(s) 223
PspN4I GGNNCC 1 cut(s) 112
PspPI GGNCC 1 cut(s) 331
PvuI CGATCG 1 cut(s) 37
PvuII CAGCTG 1 cut(s) 146
SaqAI TTAA 1 cut(s) 296
SatI GCNGC 1 cut(s) 147
Sau3AI GATC 3 cut(s) 19, 34, 192
Sau96I GGNCC 1 cut(s) 331
ScrFI CCNGG 1 cut(s) 225
SetI ASST 5 cut(s) 148, 176, 201, 243, 328
Sse9I AATT 3 cut(s) 9, 94, 318
SspMI CTAG 1 cut(s) 360
StyD4I CCNGG 1 cut(s) 223
StyI CCWWGG 1 cut(s) 249
TaaI ACNGT 1 cut(s) 160
TaiI ACGT 1 cut(s) 201
TaqI TCGA 1 cut(s) 18
TasI AATT 3 cut(s) 9, 94, 318
TfiI GAWTC 1 cut(s) 212
Tru1I TTAA 1 cut(s) 296
Tru9I TTAA 1 cut(s) 296
TscAI CASTG 2 cut(s) 192, 292
TseI GCWGC 1 cut(s) 146
TspDTI ATGAA 2 cut(s) 17, 192
TspRI CASTG 2 cut(s) 192, 292
XapI RAATTY 1 cut(s) 9
XspI CTAG 1 cut(s) 360
Zsp2I ATGCAT 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.